mRNA_35 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|157260
Unique NamemRNA_35
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|157260 vs. uniprot
Match: A0A835Z0L4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0L4_9STRA)

HSP 1 Score: 299 bits (766), Expect = 2.740e-100
Identity = 227/227 (100.00%), Postives = 227/227 (100.00%), Query Frame = 1 
Query:    1 MRPRPEHYLQLITECVRNSSTDKIRDAGDSRGGGKQAMELLQLMKRSGSNPDVRHFTAVVDACGKAGDWIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDIRRELHDRQLVPDVSSYNTLINCFATAKDPGKAEEVLAEMVQSTAVKPNVISFNRCVQYANIGYTICAEQHHHYNCRAARSVC 681
            MRPRPEHYLQLITECVRNSSTDKIRDAGDSRGGGKQAMELLQLMKRSGSNPDVRHFTAVVDACGKAGDWIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDIRRELHDRQLVPDVSSYNTLINCFATAKDPGKAEEVLAEMVQSTAVKPNVISFNRCVQYANIGYTICAEQHHHYNCRAARSVC
Sbjct:    1 MRPRPEHYLQLITECVRNSSTDKIRDAGDSRGGGKQAMELLQLMKRSGSNPDVRHFTAVVDACGKAGDWIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDIRRELHDRQLVPDVSSYNTLINCFATAKDPGKAEEVLAEMVQSTAVKPNVISFNRCVQYANIGYTICAEQHHHYNCRAARSVC 227
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BLAST of jgi.p|Trimin1|157260 vs. uniprot
Match: A0A835Z0J2_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0J2_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.070e-35
Identity = 81/190 (42.63%), Postives = 101/190 (53.16%), Query Frame = 1 
Query:    1 MRPRPEHYLQLITECVRNSSTDKIRDAGDSRGGGKQAMELLQLMKRSGSNPDVRHFTAVVDACGKAGDWIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDIRRELHDRQLVPDVSSYNTLINCFATAKDPGKAEEVLAEMVQSTAV 570
            + P P+ YLQLI EC R+SS  K+RDAGDSRGG KQA+ +LQ MK++G+ PD+RHFTAVVDACGKAGDWID                                                                        D+ +++   +LVP+V SYNTLINC+ATAK+PG+AEEVLAEM+QS AV
Sbjct:  197 LSPHPDSYLQLIGECRRSSSRQKVRDAGDSRGGSKQAVAMLQHMKQTGTKPDIRHFTAVVDACGKAGDWIDAL----------------------------------------------------------------------DVFQQMQ-LELVPNVRSYNTLINCYATAKNPGEAEEVLAEMIQSAAV 315
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BLAST of jgi.p|Trimin1|157260 vs. uniprot
Match: A0A835YZD3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZD3_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.920e-27
Identity = 143/190 (75.26%), Postives = 155/190 (81.58%), Query Frame = 1 
Query:    1 MRPRPEHYLQLITECVRNSSTDKIRDAGDSRGGGKQAMELLQLMKRSGSNPDVRHFTAVVDACGKAGDWIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDIRRELHDRQLVPDVSSYNTLINCFATAKDPGKAEEVLAEMVQSTAV 570
            + P    YLQLI ECVR+S   K+RDAGDSRGG KQAMELLQLMK++G+ PDVRHFTAVVDACGKAGDWI+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX               +  SY+ LINC+A AK P KAE VLA+MVQS  +
Sbjct:  125 INPASGDYLQLIGECVRSSK--KVRDAGDSRGGSKQAMELLQLMKQTGAKPDVRHFTAVVDACGKAGDWINXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNAYSYSALINCYAMAKQPDKAEGVLAKMVQSATI 312
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BLAST of jgi.p|Trimin1|157260 vs. uniprot
Match: A0A836CDU9_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDU9_9STRA)

HSP 1 Score: 112 bits (280), Expect = 6.760e-27
Identity = 68/161 (42.24%), Postives = 76/161 (47.20%), Query Frame = 1 
Query:  112 MELLQLMKRSGSNPDVRHFTAVVDACGKAGDWIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDIRRELHDRQLVPDVSSYNTLINCFATAKDPGKAEEVLAEMVQSTAVKPNVISFN 594
            ME+LQ MK+S   PDVRHFTAVVDACGKAGDWID                                                                        D+ RE+H RQLVPDV SYNT INC+AT KDPGKAEEVLAEM+QS A+  + ISFN
Sbjct:    1 MEILQHMKQSEERPDVRHFTAVVDACGKAGDWIDACEVFQQMQLEGIKPSAPTWGALLNTIGTAGHVEKMLAKYKEMCTIGPRPTVITMTTLLDHAGAGEVDIF-NDLWREMHYRQLVPDVKSYNTRINCYATVKDPGKAEEVLAEMIQSAAITLDAISFN 160
[Close]
BLAST of jgi.p|Trimin1|157260 vs. uniprot
Match: A0A836CEL9_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEL9_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.560e-24
Identity = 117/156 (75.00%), Postives = 125/156 (80.13%), Query Frame = 1 
Query:  130 MKRSGSNPDVRHFTAVVDACGKAGDWIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDIRRELHDRQLVPDVSSYNTLINCFATAKDPGKAEEVLAEMVQSTAVKPNVISFNR 597
            MK+S   PD+RHFTAVVDACGKAGDWID              XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       LHDRQLVPDV  YNT I+C+ATAKDPGKAEEVL EM+QS A+ P+ ISF+R
Sbjct:    1 MKQSKERPDIRHFTAVVDACGKAGDWIDATDVFQQMQLEGIEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHDRQLVPDVKCYNTRIHCYATAKDPGKAEEVLGEMIQSAAITPDAISFSR 156
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BLAST of jgi.p|Trimin1|157260 vs. uniprot
Match: A0A836CEM5_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEM5_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.310e-22
Identity = 70/206 (33.98%), Postives = 89/206 (43.20%), Query Frame = 1 
Query:    7 PRPEHYLQLITECVRNSSTDKIRDAGDSRGGGKQAMELLQLMKRSGSNPDVRHFTAVVDACGKAGDWIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-EDIRRELHDRQLVPDVSSYNTLINCFATAKDPGKAEEVLAEMVQSTAVKPNVISFNR-CVQYANI 618
            P    YL LI +CVRNS++     AGDSRGG K+A+ELLQLMK +G  P++RHFTA +  C    + I                                                                       + E I  E+ DRQL PDV +YN LI C+ATAK P K E VLAE ++S AVKP+ I F R C  +  +
Sbjct:   43 PDGRTYLTLIQQCVRNSASTH---AGDSRGGSKRALELLQLMKDAGPVPNIRHFTAAIMVCVAERNGISAITIFRMMQHEGIRPDLQSWGALLHAIGRAGQLAEMMACYREMCATGGVQPNLVIMTTLLDNAGKAGEVSIAEGIWSEMRDRQLAPDVKTYNALITCYATAKQPDKVEGVLAERIRSAAVKPDAIMFTRACADFRTV 245
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BLAST of jgi.p|Trimin1|157260 vs. uniprot
Match: A0A836CE74_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE74_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 2.760e-20
Identity = 133/195 (68.21%), Postives = 148/195 (75.90%), Query Frame = 1 
Query:   22 YLQLITECVRNSSTDKIRDAGDSRGGGKQAMELLQLMKRSGSNPDVRHFTAVVDACGKAGDWIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDIRRELHDRQLVPDVSSYNTLINCFATAKDPGKAEEVLAEMVQSTAVKPNVISFNRCVQ 606
            YL LI +CVRNS++ +   AGDSRGG KQA+ELLQLMK +GS P++RHF A +  C        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   Y+  INC+ATAK P KAEEVLAEMVQS  +KP+ I+F+RCVQ
Sbjct:   13 YLILIQQCVRNSASTR---AGDSRGGSKQALELLQLMKDAGSAPNIRHFNAAMRVCSMEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSAFINCYATAKQPDKAEEVLAEMVQSATIKPDAITFSRCVQ 204
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BLAST of jgi.p|Trimin1|157260 vs. uniprot
Match: A0A836CJV6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJV6_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 5.910e-20
Identity = 43/56 (76.79%), Postives = 49/56 (87.50%), Query Frame = 1 
Query:  424 VEDIRRELHDRQLVPDVSSYNTLINCFATAKDPGKAEEVLAEMVQSTAVKPNVISF 591
            V+DI RELHD +LVP+V SYNTLINC+A AKDPGKAEEVLAEM++S AVKPN I F
Sbjct:   29 VQDIWRELHDLKLVPNVRSYNTLINCYAMAKDPGKAEEVLAEMIKSAAVKPNAIIF 84
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BLAST of jgi.p|Trimin1|157260 vs. uniprot
Match: A0A835Z1B2_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1B2_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 3.270e-19
Identity = 91/201 (45.27%), Postives = 105/201 (52.24%), Query Frame = 1 
Query:    7 PRPEHYLQLITECVRNSSTDKIRDAGDSRGGGKQAMELLQLMKRSGSNPDVRHFTAVVDACGKAGDWIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV-EDIRRELHDRQLVPDVSSYNTLINCFATAKDPGKAEEVLAEMVQSTAVKPNVISFNRCVQ 606
            P    YL LI  C R  S  +   AGD RGG +QA+E LQ M+  G  PD+RH+ A +  C   G    XXXXXXXXXXXXXXXXXXXXXXX                                               + E I  E  DRQL P+  +YN LINC+ATA+ P KAE VLAEMVQS AVKP+ ISFNRCV+
Sbjct:  228 PTDLDYLVLIVACARGKSGMR---AGD-RGGSEQALEFLQRMQDKGPVPDIRHYNAAMKVCVTKGXXXXXXXXXXXXXXXXXXXXXXXXXXXLDAIGKAGQVAEMMAWYGEMLAIGGVLPDLVIMTTLLDNAGKAGEVRIAEGIWSETRDRQLAPNNRTYNALINCYATARQPDKAEGVLAEMVQSAAVKPDAISFNRCVK 424
[Close]
BLAST of jgi.p|Trimin1|157260 vs. uniprot
Match: A0A836CK12_9STRA (PPR_long domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK12_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 8.980e-19
Identity = 64/198 (32.32%), Postives = 79/198 (39.90%), Query Frame = 1 
Query:    7 PRPEHYLQLITECVRNSSTDKIRDAGDSRGGGKQAMELLQLMKRSGSNPDVRHFTAVVDACGKAGDW---IDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEDIRRELHDRQLVPDVSSYNTLINCFATAKDPGKAEEVLAEMVQSTAVKPNVISF 591
            P    YL LI  C    +   +  AGD RGG KQA+ELLQ M+ +G  PD+RH+ A +  C   GD    I+                                                                       E I RE+ DRQL P+  SY+  INC+ATAK P KAE VL EMVQS  +KPN I+F
Sbjct:   25 PNDVDYLMLIVACGHGKN---VMRAGD-RGGSKQALELLQRMQDTGPVPDIRHYDAAMKVCATEGDLAKAINIFESARDKAMGMKPNERSWGALLDAIGRAGQVAEMMAWYAEMLTSGGLQPNNVILNSMLAHAGTAGELGIAEGIWREMRDRQLEPNSYSYSAFINCYATAKQPDKAEGVLTEMVQSATIKPNAIAF 218
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157260 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z0L4_9STRA2.740e-100100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z0J2_9STRA1.070e-3542.63PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A835YZD3_9STRA1.920e-2775.26Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CDU9_9STRA6.760e-2742.24PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A836CEL9_9STRA1.560e-2475.00PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A836CEM5_9STRA1.310e-2233.98PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A836CE74_9STRA2.760e-2068.21PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A836CJV6_9STRA5.910e-2076.79Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z1B2_9STRA3.270e-1945.27PPR_long domain-containing protein n=1 Tax=Tribone... [more]
A0A836CK12_9STRA8.980e-1932.32PPR_long domain-containing protein (Fragment) n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_3contigContig_3:293852..295181 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|157260|e_gw1.3.6.1
Hectar predicted targeting categoryother localisation
TranscriptId157582
TrackFilteredModels1
ProteinId157260
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157260gene_35Tribonema minus UTEX_B_3156 geneContig_3 293852..295181 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_35_1exon_35_1Tribonema minus UTEX_B_3156 exonContig_3 293852..294097 +
exon_35_2exon_35_2Tribonema minus UTEX_B_3156 exonContig_3 294744..295181 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_35CDS_35Tribonema minus UTEX_B_3156 CDSContig_3 293852..294097 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157260Trimin1|157260|e_gw1.3.6.1Tribonema minus UTEX_B_3156 polypeptideContig_3 293852..295181 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_35 ID=mRNA_35|Name=jgi.p|Trimin1|157260|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=684bp|location=Sequence derived from alignment at Contig_3:293852..295181+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCCCTCGCCCTGAACATTACCTCCAGCTCATCACTGAATGCGTCCG
CAACAGCAGCACCGACAAGATCCGTGATGCTGGGGATAGCAGAGGAGGCG
GCAAGCAGGCCATGGAGCTGCTGCAGCTCATGAAACGGTCAGGCTCGAAC
CCCGATGTTCGACACTTCACAGCCGTAGTGGACGCTTGCGGAAAGGCAGG
GGACTGGATCGACGCGTCGGACGTCTTTCAGCAGATGCAGCTTGAGGGTG
TTAAGCCAAATGTACGGACCTGGAATGCACTTCTGAATGCCATCGGCACG
GCGGGTCAGGTGGGAAAAATGCTGGCGACGTATGAGGACATGTGCGCAAG
CGGAGAACAGCCAAATATTATCACCATGACCACTTTGCTAGATCATGCTG
GTGCAGCGGGGGAAATGGACACTGTCGAGGATATCCGGAGGGAACTGCAT
GATCGCCAGCTAGTGCCCGATGTGAGCAGCTACAACACACTGATCAACTG
CTTTGCAACAGCAAAAGACCCGGGCAAGGCTGAGGAAGTGCTTGCGGAGA
TGGTCCAGTCTACTGCCGTCAAGCCGAATGTCATCAGCTTCAATAGGTGC
GTACAATATGCCAACATAGGTTACACCATATGTGCAGAACAGCATCATCA
CTATAATTGCAGAGCAGCTCGTTCTGTGTGTTAA
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protein sequence of jgi.p|Trimin1|157260

>Trimin1|157260|e_gw1.3.6.1 ID=Trimin1|157260|e_gw1.3.6.1|Name=jgi.p|Trimin1|157260|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=228bp
MRPRPEHYLQLITECVRNSSTDKIRDAGDSRGGGKQAMELLQLMKRSGSN
PDVRHFTAVVDACGKAGDWIDASDVFQQMQLEGVKPNVRTWNALLNAIGT
AGQVGKMLATYEDMCASGEQPNIITMTTLLDHAGAAGEMDTVEDIRRELH
DRQLVPDVSSYNTLINCFATAKDPGKAEEVLAEMVQSTAVKPNVISFNRC
VQYANIGYTICAEQHHHYNCRAARSVC*
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mRNA from alignment at Contig_3:293852..295181+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_35 ID=mRNA_35|Name=jgi.p|Trimin1|157260|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1330bp|location=Sequence derived from alignment at Contig_3:293852..295181+ (Tribonema minus UTEX_B_3156 )
ATGCGCCCTCGCCCTGAACATTACCTCCAGCTCATCACTGAATGCGTCCG
CAACAGCAGCACCGACAAGATCCGTGATGCTGGGGATAGCAGAGGAGGCG
GCAAGCAGGCCATGGAGCTGCTGCAGCTCATGAAACGGTCAGGCTCGAAC
CCCGATGTTCGACACTTCACAGCCGTAGTGGACGCTTGCGGAAAGGCAGG
GGACTGGATCGACGCGTCGGACGTCTTTCAGCAGATGCAGCTTGAGGTAA
ACACTCATCACCTTGCTAATCCTGCTTGAAAACCTTGCTTGAATGAATCT
ATAAAGGCTCAGCAATTGAGTTACCTGACTTGACCCAGAGGTTGTTACGA
GCAGGCTACTACAGCAAGCACAGTTGCTTACTACTGCTAGGCCAAACCTA
TTGCTGCTCTACAATTCAAAGGCATTGCGCTTCGCAGGCTCATTTGAACT
TACTTTCAGTTAAACTCAAGTGAGTTGGCCACACGTGCATGGCTGACAAC
TTAATGCGGACGTTTGGACATGTTTGCGTCACCGCTTTTTGGCGCCATTG
ACTTGTCAATGCCGAATATGTGGCCAATTGTTGTATGGAACGGTTTTTGG
TGGAGGCACTTGCGGGCAACCACACCTTGTCACCTACAGTAGAGCTCTAA
GATCTTCTGATTCATTCCTATGTACAGTAGCATCACTATCATCACTATCA
CACTATATTCAAGGCATTCAATGCTTCACGCCCAAGAGCAGAGCAGAGAT
GTGCTGTTTCAATTACGTCTCAAAATCTTGATGCCAGTAAGCAATGGTAT
GGTAGTTTGGTGACCCCTGCCACTGACATCAATGATGCGACTGACTGCAG
CACGATTGACAGTTGCCGCTGCCGGCCTGGTTGTTGCTGCAGGGTGTTAA
GCCAAATGTACGGACCTGGAATGCACTTCTGAATGCCATCGGCACGGCGG
GTCAGGTGGGAAAAATGCTGGCGACGTATGAGGACATGTGCGCAAGCGGA
GAACAGCCAAATATTATCACCATGACCACTTTGCTAGATCATGCTGGTGC
AGCGGGGGAAATGGACACTGTCGAGGATATCCGGAGGGAACTGCATGATC
GCCAGCTAGTGCCCGATGTGAGCAGCTACAACACACTGATCAACTGCTTT
GCAACAGCAAAAGACCCGGGCAAGGCTGAGGAAGTGCTTGCGGAGATGGT
CCAGTCTACTGCCGTCAAGCCGAATGTCATCAGCTTCAATAGGTGCGTAC
AATATGCCAACATAGGTTACACCATATGTGCAGAACAGCATCATCACTAT
AATTGCAGAGCAGCTCGTTCTGTGTGTTAA
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Coding sequence (CDS) from alignment at Contig_3:293852..295181+

>mRNA_35 ID=mRNA_35|Name=jgi.p|Trimin1|157260|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=684bp|location=Sequence derived from alignment at Contig_3:293852..295181+ (Tribonema minus UTEX_B_3156 )
ATGCGCCCTCGCCCTGAACATTACCTCCAGCTCATCACTGAATGCGTCCG
CAACAGCAGCACCGACAAGATCCGTGATGCTGGGGATAGCAGAGGAGGCG
GCAAGCAGGCCATGGAGCTGCTGCAGCTCATGAAACGGTCAGGCTCGAAC
CCCGATGTTCGACACTTCACAGCCGTAGTGGACGCTTGCGGAAAGGCAGG
GGACTGGATCGACGCGTCGGACGTCTTTCAGCAGATGCAGCTTGAGGGTG
TTAAGCCAAATGTACGGACCTGGAATGCACTTCTGAATGCCATCGGCACG
GCGGGTCAGGTGGGAAAAATGCTGGCGACGTATGAGGACATGTGCGCAAG
CGGAGAACAGCCAAATATTATCACCATGACCACTTTGCTAGATCATGCTG
GTGCAGCGGGGGAAATGGACACTGTCGAGGATATCCGGAGGGAACTGCAT
GATCGCCAGCTAGTGCCCGATGTGAGCAGCTACAACACACTGATCAACTG
CTTTGCAACAGCAAAAGACCCGGGCAAGGCTGAGGAAGTGCTTGCGGAGA
TGGTCCAGTCTACTGCCGTCAAGCCGAATGTCATCAGCTTCAATAGGTGC
GTACAATATGCCAACATAGGTTACACCATATGTGCAGAACAGCATCATCA
CTATAATTGCAGAGCAGCTCGTTCTGTGTGTTAA
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