mRNA_3362 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|347908
Unique NamemRNA_3362
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|347908 vs. uniprot
Match: A0A835ZFC3_9STRA (Aspartate carbamoyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC3_9STRA)

HSP 1 Score: 645 bits (1665), Expect = 1.690e-233
Identity = 332/332 (100.00%), Postives = 332/332 (100.00%), Query Frame = 2
Query:   47 MEKYVPAPARAVFNLLQTNFTADAASWEGKCIISVKQFGLESLAKLFEVADEMKKLVKESGGDQRLQGRLLATLFFENSTRTCCSLQAAMLRLGGSVVSVNETTSSVKKGETLQDTIACLCSYCDVVALRHPQQGAAVQAVTATRRPLINAGDGVGEHPTQAILDVYTMVSELGGVEGKVITLVGDLKNGRTVHSLARLLALYACELHFVAPPALRMPEDVVRDVTARGRATVTQSDAFDAVLPRADVLYVTRVQKERFEDAAEYEALRLVYRVTPEVLARAKRDMVLMHPLPRVGEIAEDCDDDPRAAYVRQMENGMVVRMALLALLLGKA 1042
            MEKYVPAPARAVFNLLQTNFTADAASWEGKCIISVKQFGLESLAKLFEVADEMKKLVKESGGDQRLQGRLLATLFFENSTRTCCSLQAAMLRLGGSVVSVNETTSSVKKGETLQDTIACLCSYCDVVALRHPQQGAAVQAVTATRRPLINAGDGVGEHPTQAILDVYTMVSELGGVEGKVITLVGDLKNGRTVHSLARLLALYACELHFVAPPALRMPEDVVRDVTARGRATVTQSDAFDAVLPRADVLYVTRVQKERFEDAAEYEALRLVYRVTPEVLARAKRDMVLMHPLPRVGEIAEDCDDDPRAAYVRQMENGMVVRMALLALLLGKA
Sbjct:    1 MEKYVPAPARAVFNLLQTNFTADAASWEGKCIISVKQFGLESLAKLFEVADEMKKLVKESGGDQRLQGRLLATLFFENSTRTCCSLQAAMLRLGGSVVSVNETTSSVKKGETLQDTIACLCSYCDVVALRHPQQGAAVQAVTATRRPLINAGDGVGEHPTQAILDVYTMVSELGGVEGKVITLVGDLKNGRTVHSLARLLALYACELHFVAPPALRMPEDVVRDVTARGRATVTQSDAFDAVLPRADVLYVTRVQKERFEDAAEYEALRLVYRVTPEVLARAKRDMVLMHPLPRVGEIAEDCDDDPRAAYVRQMENGMVVRMALLALLLGKA 332          
BLAST of jgi.p|Trimin1|347908 vs. uniprot
Match: A0A2D4CAF1_PYTIN (Aspartate carbamoyltransferase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CAF1_PYTIN)

HSP 1 Score: 369 bits (948), Expect = 1.390e-124
Identity = 191/313 (61.02%), Postives = 240/313 (76.68%), Query Frame = 2
Query:  110 ADAASWEGKCIISVKQFGLESLAKLFEVADEMKKLVKESGGDQRLQGRLLATLFFENSTRTCCSLQAAMLRLGGSVVSVNETTSSVKKGETLQDTIACLCSYCDVVALRHPQQGAAVQAVTATRRPLINAGDGVGEHPTQAILDVYTMVSELGGVE--GKVITLVGDLKNGRTVHSLARLLALYACELHFVAPPALRMPEDVVRDVTARGRATVTQSDAFDAVLPRADVLYVTRVQKERFEDAAEYEALRLVYRVTPEVLARAKRDMVLMHPLPRVGEIAEDCDDDPRAAYVRQMENGMVVRMALLALLLGKA 1042
            A    W G+ I+SV+QFG+ES  ++  VADEMK +VK  G    L+G+LLA +F+E STRT CS QAAMLRLGG VVSVNE++SSVKKGETL DTI CL  Y DV+ LRHP +G+A  A  AT +P++NAGDGVGEHPTQA+LD+YT+VSE+G  +  GKV+T+VGDLKNGRTVHSL++LLA +   L +V+P +L+MP  +V ++ ARG +    SD  D+V+ ++DVLYVTRVQKERFE   EY A++  + +TP  +A AK  +V+MHPLPRVGEIAE  D DPRAAY RQMENGM VRMALLAL+LGKA
Sbjct:    9 AGKGEWIGENILSVEQFGVESAKRVLRVADEMKAMVKRDGSSDLLKGKLLANVFYEPSTRTSCSFQAAMLRLGGLVVSVNESSSSVKKGETLSDTIKCLSCYADVLVLRHPVKGSAAIAAAATEKPVLNAGDGVGEHPTQALLDLYTIVSEMGTTDLRGKVVTMVGDLKNGRTVHSLSKLLAHFGVTLQYVSPASLQMPRYIVEELAARGVSQHETSD-LDSVVNQSDVLYVTRVQKERFESEDEYNAVKDSFIITPATIANAKSSLVIMHPLPRVGEIAEAVDSDPRAAYFRQMENGMYVRMALLALVLGKA 320          
BLAST of jgi.p|Trimin1|347908 vs. uniprot
Match: D7G203_ECTSI (Aspartate carbamoyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G203_ECTSI)

HSP 1 Score: 368 bits (945), Expect = 4.070e-123
Identity = 192/356 (53.93%), Postives = 251/356 (70.51%), Query Frame = 2
Query:   11 LTDIVSARQARQMEKYVPAPARAVFNLLQTNFTADAASWEGKCIISVKQFGLESLAKLFEVADEMKKLVKESGGDQRL------QGRLLATLFFENSTRTCCSLQAAMLRLGGSVVSVNETTSSVKKGETLQDTIACLCSYCDVVALRHPQQGAAVQAVTATRRPLINAGDGVGEHPTQAILDVYTMVSELGG------VEGKVITLVGDLKNGRTVHSLARLLALYACELHFVAPPALRMPEDVVRDVTARGRATVTQSDAFDAVLPRADVLYVTRVQKERFEDAAEYEALRLVYRVTPEVLARAKRDMVLMHPLPRVGEIAEDCDDDPRAAYVRQMENGMVVRMALLALLLGKA 1042
            ++D+V+  +A++ E+ +              FTAD ASWEGK ++SV QF  E L  L+ VA +MK++V +   D  L      +GR+L TLF+E STRT CS QAA+ RLGG+ VSV+  +SS+KKGE+L+DT+  L SYCD VALRHP +GAA  AV   RRP++NAGDGVGEHPTQA+LD+YT+ +ELGG      + GKV+ L+GDLK+GRTVHSLA+LLA + C L +V+P +L+MP  +  +V + G +  T+ +    VL  ADVLYVTRVQKERF    E++ +   Y++TPEVL++ K   VLMHPLPRVGEI EDCD DPRAAY +QMENGM VRMALLAL+ GKA
Sbjct:   46 VSDLVAKDRAKRAEENM------------ATFTADKASWEGKSVVSVSQFSTEGLGLLYAVAGKMKEMVADKSDDATLSRNPPLRGRVLGTLFYETSTRTACSFQAAVARLGGTFVSVDPASSSIKKGESLEDTVMSLLSYCDAVALRHPAKGAARAAVGVARRPVLNAGDGVGEHPTQALLDLYTIAAELGGEAGLSGLRGKVVALIGDLKHGRTVHSLAKLLARFGCVLRYVSPASLQMPRYIQDEVESAGESVQTEVEDIGVVLEEADVLYVTRVQKERFASREEFDRVNGSYKITPEVLSKVKPSSVLMHPLPRVGEIVEDCDLDPRAAYFKQMENGMYVRMALLALVFGKA 389          
BLAST of jgi.p|Trimin1|347908 vs. uniprot
Match: K3X9Z5_GLOUD (Aspartate carbamoyltransferase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X9Z5_GLOUD)

HSP 1 Score: 365 bits (938), Expect = 4.400e-123
Identity = 186/310 (60.00%), Postives = 243/310 (78.39%), Query Frame = 2
Query:  122 SWEGKCIISVKQFGLESLAKLFEVADEMKKLVKESGGDQRLQGRLLATLFFENSTRTCCSLQAAMLRLGGSVVSVNETTSSVKKGETLQDTIACLCSYCDVVALRHPQQGAAVQAVTATRRPLINAGDGVGEHPTQAILDVYTMVSELG---GVEGKVITLVGDLKNGRTVHSLARLLALYACELHFVAPPALRMPEDVVRDVTARGRATVTQSDAFDAVLPRADVLYVTRVQKERFEDAAEYEALRLVYRVTPEVLARAKRDMVLMHPLPRVGEIAEDCDDDPRAAYVRQMENGMVVRMALLALLLGKA 1042
            SWEG+ I+S++QFG+ES  ++ +VADEM+ +VK  G    L+G+LLA +FFE STRT CS QAAMLRLGG VV VNE++SS KKGETL DTI C+  Y DV+ LRHP +G+A  A +AT++P++NAGDGVGEHPTQA+LD+YT+ +ELG    + GKV+T+VGDLKNGRTVHSLARLLAL+  ++++VAP +L+MP  +  ++ ARG +    +D  D+V+  +DVLYVTRVQKERFE   EY A++  + +T   +A AK++MV+MHPLPRVGEIA + D DPRAAY RQMENGM VRMALLAL++GKA
Sbjct:   11 SWEGENILSIEQFGVESAKRVLQVADEMRAIVKSQGACDLLKGKLLANVFFEPSTRTSCSFQAAMLRLGGMVVPVNESSSSSKKGETLADTIRCMECYSDVIVLRHPVKGSAAVAASATKKPVLNAGDGVGEHPTQALLDLYTIYNELGRSLDLSGKVVTMVGDLKNGRTVHSLARLLALFNVKINYVAPESLKMPRSIFEELAARGISQHETTD-LDSVVNESDVLYVTRVQKERFESEDEYNAVKDSFVITLATIANAKKNMVVMHPLPRVGEIALEVDSDPRAAYFRQMENGMYVRMALLALVMGKA 319          
BLAST of jgi.p|Trimin1|347908 vs. uniprot
Match: A0A5D6Y0H6_9STRA (Aspartate carbamoyltransferase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0H6_9STRA)

HSP 1 Score: 364 bits (935), Expect = 1.170e-122
Identity = 190/311 (61.09%), Postives = 240/311 (77.17%), Query Frame = 2
Query:  122 SWEGKCIISVKQFGLESLAKLFEVADEMKKLVKESGGDQRLQGRLLATLFFENSTRTCCSLQAAMLRLGGSVVSVNETTSSVKKGETLQDTIACLCSYCDVVALRHPQQGAAVQAVTATRRPLINAGDGVGEHPTQAILDVYTMVSELG----GVEGKVITLVGDLKNGRTVHSLARLLALYACELHFVAPPALRMPEDVVRDVTARGRATVTQSDAFDAVLPRADVLYVTRVQKERFEDAAEYEALRLVYRVTPEVLARAKRDMVLMHPLPRVGEIAEDCDDDPRAAYVRQMENGMVVRMALLALLLGKA 1042
            SW G  I+SV+QF +ES  ++ +VADEM+ +VK  G    L+G+LLA +FFE STRT CS QAAMLRLGG VV VNE++SS KKGETL DTI CL  Y DV+ LRHP +G+A  A  ATR+P++NAGDGVGEHPTQA+LD+YT+ +ELG    G+ GKV+T+VGDLKNGRTVHSLARLLAL+   +++VAP +L+MP  +V ++ ARG  T  ++   DAV+ ++DVLYVTRVQKERFE    Y A++  + +T   +A AK+ +VL+HPLPRVGEIAE+ D DPRAAY RQMENGM VRMALLAL+LGKA
Sbjct:    8 SWAGANILSVEQFDVESAKRVLQVADEMRDVVKRQGASDLLKGKLLANVFFEPSTRTSCSFQAAMLRLGGLVVPVNESSSSSKKGETLGDTIRCLECYADVIVLRHPVKGSAAVAAAATRKPVLNAGDGVGEHPTQALLDLYTIYNELGRDLDGLAGKVVTMVGDLKNGRTVHSLARLLALFNVTINYVAPESLQMPRYIVDELAARG-VTQHETTDLDAVIKQSDVLYVTRVQKERFESEEAYNAVKDSFVITCATIADAKQSLVLLHPLPRVGEIAEEVDADPRAAYFRQMENGMYVRMALLALVLGKA 317          
BLAST of jgi.p|Trimin1|347908 vs. uniprot
Match: A0A8K1CPG4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPG4_PYTOL)

HSP 1 Score: 362 bits (930), Expect = 7.450e-122
Identity = 184/308 (59.74%), Postives = 242/308 (78.57%), Query Frame = 2
Query:  125 WEGKCIISVKQFGLESLAKLFEVADEMKKLVKESGGDQRLQGRLLATLFFENSTRTCCSLQAAMLRLGGSVVSVNETTSSVKKGETLQDTIACLCSYCDVVALRHPQQGAAVQAVTATRRPLINAGDGVGEHPTQAILDVYTMVSELG--GVEGKVITLVGDLKNGRTVHSLARLLALYACELHFVAPPALRMPEDVVRDVTARGRATVTQSDAFDAVLPRADVLYVTRVQKERFEDAAEYEALRLVYRVTPEVLARAKRDMVLMHPLPRVGEIAEDCDDDPRAAYVRQMENGMVVRMALLALLLGKA 1042
            W G+ I+SV+QFG++S  ++  VADEMK +VK  G    L+G+LLA +F+E STRT CS QAAMLRLGG VV VNE++SSVKKGETL DTI C+  Y DV+ LRHP +G+A  A  AT++P++NAGDGVGEHPTQA+LD+YT+ +ELG   ++GKV+T+VGDLKNGRTVHSL++LLAL+   +++VAP +L+MP  +  ++ ARG      +D  ++V+  +DVLYVTRVQKERFE  AEY+A++  + +T   +A AK+ +V+MHPLPRVGEIAE+ D+DPRAAY RQMENGM VRMALLAL+LGKA
Sbjct:   14 WLGEDILSVEQFGVDSAKRVLRVADEMKAIVKSQGSTDILKGKLLANIFYEPSTRTSCSFQAAMLRLGGVVVPVNESSSSVKKGETLSDTIKCMECYSDVIVLRHPVKGSAAIAAGATKKPVLNAGDGVGEHPTQALLDLYTIYNELGTSDLQGKVVTMVGDLKNGRTVHSLSKLLALFGVSINYVAPESLKMPRYIYDELAARGVKQHETTD-LESVINESDVLYVTRVQKERFESEAEYDAVKDSFCITLSTIANAKQSLVIMHPLPRVGEIAEEVDNDPRAAYFRQMENGMYVRMALLALVLGKA 320          
BLAST of jgi.p|Trimin1|347908 vs. uniprot
Match: A0A421FBB3_9STRA (Aspartate carbamoyltransferase n=5 Tax=Phytophthora TaxID=4783 RepID=A0A421FBB3_9STRA)

HSP 1 Score: 355 bits (911), Expect = 6.080e-119
Identity = 184/313 (58.79%), Postives = 238/313 (76.04%), Query Frame = 2
Query:  113 DAASWEGKCIISVKQFGLESLAKLFEVADEMKKLVKESGGDQRLQGRLLATLFFENSTRTCCSLQAAMLRLGGSVVSVNETTSSVKKGETLQDTIACLCSYCDVVALRHPQQGAAVQAVTATRRPLINAGDGVGEHPTQAILDVYTMVSELGGVE---GKVITLVGDLKNGRTVHSLARLLALYACELHFVAPPALRMPEDVVRDVTARGRATVTQSDAFDAVLPRADVLYVTRVQKERFEDAAEYEALRLVYRVTPEVLARAKRDMVLMHPLPRVGEIAEDCDDDPRAAYVRQMENGMVVRMALLALLLGKA 1042
            D  +W+ + I+S+ QFG ES  ++  +ADEMK +VK  G +  LQG+LLA +FFE STRT  S Q+AMLRLGG VV VNET+SS +KGETL DTI CL  Y DVV LRHP +G+A+ A  +T++P++NAGDGVGEHPTQA+LD+YT+ SE G +E   GKVIT+VGDLK GRTVHSL++LLA+Y    ++V+P +L+MP  V  ++ A+G      SD  D+V+ ++DVLYVTRVQKERFE  A+Y A++  + +T   +A+AK  M++MHPLPRVGEIAE+ D DPRAAY RQMENGM VRMALLAL+LGKA
Sbjct:   11 DVGAWKDENILSIAQFGKESAQRVLNLADEMKSMVKSQGANDLLQGKLLANVFFEPSTRTSSSFQSAMLRLGGKVVCVNETSSSSQKGETLGDTIRCLECYADVVVLRHPVKGSALVAAESTKKPVLNAGDGVGEHPTQAMLDLYTIYSEFGDLENLKGKVITMVGDLKYGRTVHSLSKLLAMYGTTFNYVSPESLKMPRYVYDELAAQGIQQNETSD-LDSVINQSDVLYVTRVQKERFESEADYNAVKDSFCITKATIAQAKPTMIIMHPLPRVGEIAEEVDSDPRAAYFRQMENGMYVRMALLALVLGKA 322          
BLAST of jgi.p|Trimin1|347908 vs. uniprot
Match: A0A484EEU0_BRELC (Aspartate carbamoyltransferase n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EEU0_BRELC)

HSP 1 Score: 352 bits (903), Expect = 9.590e-118
Identity = 178/310 (57.42%), Postives = 236/310 (76.13%), Query Frame = 2
Query:  122 SWEGKCIISVKQFGLESLAKLFEVADEMKKLVKESGGDQRLQGRLLATLFFENSTRTCCSLQAAMLRLGGSVVSVNETTSSVKKGETLQDTIACLCSYCDVVALRHPQQGAAVQAVTATRRPLINAGDGVGEHPTQAILDVYTMVSELGGVE---GKVITLVGDLKNGRTVHSLARLLALYACELHFVAPPALRMPEDVVRDVTARGRATVTQSDAFDAVLPRADVLYVTRVQKERFEDAAEYEALRLVYRVTPEVLARAKRDMVLMHPLPRVGEIAEDCDDDPRAAYVRQMENGMVVRMALLALLLGKA 1042
            +WEG+ I+S+ QF  ES  ++ +VADEMK +VK  G +  L+G+LLA +F E STRT  S QAAM RLGG V+ VNE++SS +KGE L DTI CL SY DV+ LRHP++G+A+ A  AT +P++NAGDGVGEHPTQA+LD+YT+ SE G +    GKV+T+VGDLKNGRTVHSL++LLA+Y  + H+V+P +L+MP DV  +++ +G      +D  D+V+ + DVLYVTRVQKERFE+ A+Y A++  + +T + +  AK  MV+MHP+PRVGEIA + D DPRAAY RQMENGM VRMALLAL+LGKA
Sbjct:   13 AWEGESILSIVQFSRESAQRVLDVADEMKNMVKTQGANDLLKGKLLANVFMEPSTRTSSSFQAAMKRLGGLVLCVNESSSSSQKGEILHDTIRCLASYADVIVLRHPKKGSALIAAEATTKPVLNAGDGVGEHPTQAMLDLYTIYSEFGDMATFTGKVVTMVGDLKNGRTVHSLSKLLAMYGAKFHYVSPESLKMPRDVYMELSEQGIVQNETTD-LDSVIKQTDVLYVTRVQKERFENEADYNAVKDSFCITRDTIKEAKSTMVIMHPMPRVGEIAREVDIDPRAAYFRQMENGMYVRMALLALVLGKA 321          
BLAST of jgi.p|Trimin1|347908 vs. uniprot
Match: A0A0N7L525_PLAHL (Aspartate carbamoyltransferase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L525_PLAHL)

HSP 1 Score: 351 bits (901), Expect = 1.930e-117
Identity = 183/310 (59.03%), Postives = 237/310 (76.45%), Query Frame = 2
Query:  122 SWEGKCIISVKQFGLESLAKLFEVADEMKKLVKESGGDQRLQGRLLATLFFENSTRTCCSLQAAMLRLGGSVVSVNETTSSVKKGETLQDTIACLCSYCDVVALRHPQQGAAVQAVTATRRPLINAGDGVGEHPTQAILDVYTMVSELGGVE---GKVITLVGDLKNGRTVHSLARLLALYACELHFVAPPALRMPEDVVRDVTARGRATVTQSDAFDAVLPRADVLYVTRVQKERFEDAAEYEALRLVYRVTPEVLARAKRDMVLMHPLPRVGEIAEDCDDDPRAAYVRQMENGMVVRMALLALLLGKA 1042
            +WEG+ I+SV QFG +S  ++  VADEMK +VK  G +  L G+LLA +F E STRT  S QAAMLRLGG VV VNE++SS +KGETL DTI CL  Y DVV LRHP +G+A+ A  AT++P++NAGDGVGEHPTQA+LD+YT+ SE G +E   GKVIT+VGDLKNGRTVHSL++LLA+Y  + ++V+P +L+MP  V  ++ ++       +D  D+V+   DVLYVTRVQKERF+D  +Y A++  +R+T +V+  AK +M++MHPLPRVGEIAE+ D DPRAAY RQMENGM VRMALLAL+LGKA
Sbjct:   13 AWEGESILSVVQFGKDSAQRVLSVADEMKTMVKTQGANDLLNGKLLANVFMEPSTRTSSSFQAAMLRLGGRVVCVNESSSSSQKGETLHDTIRCLECYADVVVLRHPVKGSALIAAEATKKPVLNAGDGVGEHPTQALLDLYTIYSEFGDLESLKGKVITMVGDLKNGRTVHSLSKLLAMYGPKFNYVSPESLKMPRYVYDELQSQCIKQNETTD-LDSVIHETDVLYVTRVQKERFDDEEDYIAVKDSFRITLDVIKDAKSEMIIMHPLPRVGEIAEEVDKDPRAAYFRQMENGMYVRMALLALVLGKA 321          
BLAST of jgi.p|Trimin1|347908 vs. uniprot
Match: G4YYP3_PHYSP (Aspartate carbamoyltransferase n=4 Tax=Phytophthora TaxID=4783 RepID=G4YYP3_PHYSP)

HSP 1 Score: 351 bits (901), Expect = 2.000e-117
Identity = 182/310 (58.71%), Postives = 236/310 (76.13%), Query Frame = 2
Query:  122 SWEGKCIISVKQFGLESLAKLFEVADEMKKLVKESGGDQRLQGRLLATLFFENSTRTCCSLQAAMLRLGGSVVSVNETTSSVKKGETLQDTIACLCSYCDVVALRHPQQGAAVQAVTATRRPLINAGDGVGEHPTQAILDVYTMVSELGGVE---GKVITLVGDLKNGRTVHSLARLLALYACELHFVAPPALRMPEDVVRDVTARGRATVTQSDAFDAVLPRADVLYVTRVQKERFEDAAEYEALRLVYRVTPEVLARAKRDMVLMHPLPRVGEIAEDCDDDPRAAYVRQMENGMVVRMALLALLLGKA 1042
            SW+G+ I+S+ QFG +S  ++ +VADEMK +VK  G    L+G+LLA +F E STRT  S QAAM RLGG VV VNET+SS +KGETL DTI CL  Y DVV LRHP +G+A+ A  AT++P++NAGDGVGEHP+QA+LD+YT+ SELG +E   GKV+T+VGDLK GRTVHSL+RLLA+Y    ++V+P +L+MP  V  ++ A+G      +D  D+V+ + DVLYVTRVQKERFE  A+Y A++  +R+T + +  AK  M++MHPLPRVGE+AE+ D DPRAAY RQMENGM VRMALLAL+LGKA
Sbjct:   14 SWQGENILSIAQFGKQSAQRVLDVADEMKNMVKTQGASDLLKGKLLANVFMEPSTRTSSSFQAAMKRLGGLVVCVNETSSSSQKGETLHDTIRCLECYADVVVLRHPIKGSALVAAEATKKPVLNAGDGVGEHPSQAMLDLYTIHSELGDLENLKGKVVTMVGDLKYGRTVHSLSRLLAMYGTTFNYVSPESLKMPRYVFDELAAQGIQQNETTD-LDSVINQTDVLYVTRVQKERFESEADYNAVKDSFRITLDTIKDAKSKMIIMHPLPRVGEVAEEVDTDPRAAYFRQMENGMYVRMALLALVLGKA 322          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347908 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZFC3_9STRA1.690e-233100.00Aspartate carbamoyltransferase n=1 Tax=Tribonema m... [more]
A0A2D4CAF1_PYTIN1.390e-12461.02Aspartate carbamoyltransferase n=2 Tax=Pythium ins... [more]
D7G203_ECTSI4.070e-12353.93Aspartate carbamoyltransferase n=1 Tax=Ectocarpus ... [more]
K3X9Z5_GLOUD4.400e-12360.00Aspartate carbamoyltransferase n=1 Tax=Globisporan... [more]
A0A5D6Y0H6_9STRA1.170e-12261.09Aspartate carbamoyltransferase n=1 Tax=Pythium bra... [more]
A0A8K1CPG4_PYTOL7.450e-12259.74Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A421FBB3_9STRA6.080e-11958.79Aspartate carbamoyltransferase n=5 Tax=Phytophthor... [more]
A0A484EEU0_BRELC9.590e-11857.42Aspartate carbamoyltransferase n=1 Tax=Bremia lact... [more]
A0A0N7L525_PLAHL1.930e-11759.03Aspartate carbamoyltransferase n=1 Tax=Plasmopara ... [more]
G4YYP3_PHYSP2.000e-11758.71Aspartate carbamoyltransferase n=4 Tax=Phytophthor... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:391236..392450 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|347908|estExt_Genemark1.C_Ctg_170055
DescriptionAspartate carbamoyltransferase. Source PGD
COG categoryEF
Max annot lvl121069|Pythiales
EggNOG OGsCOG0458@1|root,KOG0370@2759|Eukaryota,1MADF@121069|Pythiales
Evalue4.15e-124
Seed ortholog65071.PYU1_T014044
Hectar predicted targeting categoryother localisation
TranscriptId348230
TrackFilteredModels1
ProteinId347908
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347908gene_3362Tribonema minus UTEX_B_3156 geneContig_17 391236..392450 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3362_1exon_3362_1Tribonema minus UTEX_B_3156 exonContig_17 391236..391296 +
exon_3362_2exon_3362_2Tribonema minus UTEX_B_3156 exonContig_17 391467..392450 +


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_3362UTR5_3362Tribonema minus UTEX_B_3156 five_prime_UTRContig_17 391236..391281 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3362CDS_3362Tribonema minus UTEX_B_3156 CDSContig_17 391282..391296 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347908Trimin1|347908|estExt_Genemark1.C_Ctg_170055Tribonema minus UTEX_B_3156 polypeptideContig_17 391282..392450 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3362 ID=mRNA_3362|Name=jgi.p|Trimin1|347908|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1045bp|location=Sequence derived from alignment at Contig_17:391236..392450+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CTTCACAGCACTTACTGACATTGTGTCAGCCCGGCAAGCCCGGCAGATGG
AGAAATACGTGCCCGCTCCGGCTCGTGCGGTGTTCAACCTCCTCCAGACA
AATTTCACAGCGGACGCGGCGAGCTGGGAGGGCAAGTGCATCATCAGCGT
CAAACAGTTCGGTCTGGAATCTTTGGCCAAGCTCTTCGAAGTTGCAGATG
AAATGAAAAAGCTGGTCAAGGAGAGCGGCGGCGACCAAAGGCTCCAGGGA
CGCCTGCTGGCGACCCTCTTCTTTGAGAACAGCACTCGCACCTGCTGCTC
GCTGCAGGCAGCCATGCTGCGCCTCGGCGGCAGCGTGGTGTCCGTCAACG
AGACCACGTCCAGCGTAAAAAAAGGGGAAACCCTGCAAGATACCATCGCC
TGCCTCTGCTCTTACTGCGACGTCGTGGCGCTGCGGCACCCCCAGCAAGG
CGCCGCCGTGCAGGCCGTGACGGCGACGCGGCGGCCGCTGATCAACGCGG
GCGACGGCGTCGGCGAGCACCCCACGCAGGCCATATTGGACGTCTACACC
ATGGTCTCGGAGCTGGGGGGGGTCGAGGGCAAGGTCATAACCCTGGTGGG
GGACCTCAAGAACGGGCGCACGGTGCACTCGCTCGCGCGCCTGCTGGCGC
TGTACGCGTGCGAGCTGCACTTCGTCGCGCCGCCGGCGCTGCGCATGCCG
GAGGACGTCGTGCGCGACGTCACGGCGCGCGGGCGCGCGACCGTGACGCA
GAGCGACGCCTTCGACGCCGTCCTGCCGCGCGCGGACGTGCTGTACGTGA
CGCGCGTGCAGAAGGAGCGCTTCGAGGACGCGGCCGAGTACGAGGCGCTG
CGCCTCGTGTACAGGGTCACGCCGGAGGTCCTCGCGCGCGCCAAGCGCGA
CATGGTCCTCATGCACCCCCTCCCGCGCGTCGGCGAGATCGCGGAGGACT
GCGACGACGACCCGCGCGCCGCGTACGTGCGCCAGATGGAGAACGGCATG
GTCGTGCGCATGGCGCTGCTCGCGCTGCTGCTGGGCAAGGCGTGA
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protein sequence of jgi.p|Trimin1|347908

>Trimin1|347908|estExt_Genemark1.C_Ctg_170055 ID=Trimin1|347908|estExt_Genemark1.C_Ctg_170055|Name=jgi.p|Trimin1|347908|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=333bp
MEKYVPAPARAVFNLLQTNFTADAASWEGKCIISVKQFGLESLAKLFEVA
DEMKKLVKESGGDQRLQGRLLATLFFENSTRTCCSLQAAMLRLGGSVVSV
NETTSSVKKGETLQDTIACLCSYCDVVALRHPQQGAAVQAVTATRRPLIN
AGDGVGEHPTQAILDVYTMVSELGGVEGKVITLVGDLKNGRTVHSLARLL
ALYACELHFVAPPALRMPEDVVRDVTARGRATVTQSDAFDAVLPRADVLY
VTRVQKERFEDAAEYEALRLVYRVTPEVLARAKRDMVLMHPLPRVGEIAE
DCDDDPRAAYVRQMENGMVVRMALLALLLGKA*
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mRNA from alignment at Contig_17:391236..392450+

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3362 ID=mRNA_3362|Name=jgi.p|Trimin1|347908|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1215bp|location=Sequence derived from alignment at Contig_17:391236..392450+ (Tribonema minus UTEX_B_3156 )
CTTCACAGCACTTACTGACATTGTGTCAGCCCGGCAAGCCCGGCAGATGG AGAAATACGTGGTAAGTCTGCTTCTCTCGAGCGAAGTTGGATCCTCACAA AATCCGCTGGTTGCAGTCGCACAATCGTGGATGATGCCCCACAAGACGCA ATAACAACGCGTTTTCTTGCTTTGCTCACATCCGATCACTGCGCATCCGT CGCAAACTATGATTGCGTCACTGAACGCCAGCCCGCTCCGGCTCGTGCGG TGTTCAACCTCCTCCAGACAAATTTCACAGCGGACGCGGCGAGCTGGGAG GGCAAGTGCATCATCAGCGTCAAACAGTTCGGTCTGGAATCTTTGGCCAA GCTCTTCGAAGTTGCAGATGAAATGAAAAAGCTGGTCAAGGAGAGCGGCG GCGACCAAAGGCTCCAGGGACGCCTGCTGGCGACCCTCTTCTTTGAGAAC AGCACTCGCACCTGCTGCTCGCTGCAGGCAGCCATGCTGCGCCTCGGCGG CAGCGTGGTGTCCGTCAACGAGACCACGTCCAGCGTAAAAAAAGGGGAAA CCCTGCAAGATACCATCGCCTGCCTCTGCTCTTACTGCGACGTCGTGGCG CTGCGGCACCCCCAGCAAGGCGCCGCCGTGCAGGCCGTGACGGCGACGCG GCGGCCGCTGATCAACGCGGGCGACGGCGTCGGCGAGCACCCCACGCAGG CCATATTGGACGTCTACACCATGGTCTCGGAGCTGGGGGGGGTCGAGGGC AAGGTCATAACCCTGGTGGGGGACCTCAAGAACGGGCGCACGGTGCACTC GCTCGCGCGCCTGCTGGCGCTGTACGCGTGCGAGCTGCACTTCGTCGCGC CGCCGGCGCTGCGCATGCCGGAGGACGTCGTGCGCGACGTCACGGCGCGC GGGCGCGCGACCGTGACGCAGAGCGACGCCTTCGACGCCGTCCTGCCGCG CGCGGACGTGCTGTACGTGACGCGCGTGCAGAAGGAGCGCTTCGAGGACG CGGCCGAGTACGAGGCGCTGCGCCTCGTGTACAGGGTCACGCCGGAGGTC CTCGCGCGCGCCAAGCGCGACATGGTCCTCATGCACCCCCTCCCGCGCGT CGGCGAGATCGCGGAGGACTGCGACGACGACCCGCGCGCCGCGTACGTGC GCCAGATGGAGAACGGCATGGTCGTGCGCATGGCGCTGCTCGCGCTGCTG CTGGGCAAGGCGTGA
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Coding sequence (CDS) from alignment at Contig_17:391236..392450+

>mRNA_3362 ID=mRNA_3362|Name=jgi.p|Trimin1|347908|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=999bp|location=Sequence derived from alignment at Contig_17:391236..392450+ (Tribonema minus UTEX_B_3156 )
ATGGAGAAATACGTGCCCGCTCCGGCTCGTGCGGTGTTCAACCTCCTCCA
GACAAATTTCACAGCGGACGCGGCGAGCTGGGAGGGCAAGTGCATCATCA
GCGTCAAACAGTTCGGTCTGGAATCTTTGGCCAAGCTCTTCGAAGTTGCA
GATGAAATGAAAAAGCTGGTCAAGGAGAGCGGCGGCGACCAAAGGCTCCA
GGGACGCCTGCTGGCGACCCTCTTCTTTGAGAACAGCACTCGCACCTGCT
GCTCGCTGCAGGCAGCCATGCTGCGCCTCGGCGGCAGCGTGGTGTCCGTC
AACGAGACCACGTCCAGCGTAAAAAAAGGGGAAACCCTGCAAGATACCAT
CGCCTGCCTCTGCTCTTACTGCGACGTCGTGGCGCTGCGGCACCCCCAGC
AAGGCGCCGCCGTGCAGGCCGTGACGGCGACGCGGCGGCCGCTGATCAAC
GCGGGCGACGGCGTCGGCGAGCACCCCACGCAGGCCATATTGGACGTCTA
CACCATGGTCTCGGAGCTGGGGGGGGTCGAGGGCAAGGTCATAACCCTGG
TGGGGGACCTCAAGAACGGGCGCACGGTGCACTCGCTCGCGCGCCTGCTG
GCGCTGTACGCGTGCGAGCTGCACTTCGTCGCGCCGCCGGCGCTGCGCAT
GCCGGAGGACGTCGTGCGCGACGTCACGGCGCGCGGGCGCGCGACCGTGA
CGCAGAGCGACGCCTTCGACGCCGTCCTGCCGCGCGCGGACGTGCTGTAC
GTGACGCGCGTGCAGAAGGAGCGCTTCGAGGACGCGGCCGAGTACGAGGC
GCTGCGCCTCGTGTACAGGGTCACGCCGGAGGTCCTCGCGCGCGCCAAGC
GCGACATGGTCCTCATGCACCCCCTCCCGCGCGTCGGCGAGATCGCGGAG
GACTGCGACGACGACCCGCGCGCCGCGTACGTGCGCCAGATGGAGAACGG
CATGGTCGTGCGCATGGCGCTGCTCGCGCTGCTGCTGGGCAAGGCGTGA
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