mRNA_3351 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|161438
Unique NamemRNA_3351
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Match: A0A835Z933_9STRA (Hist_deacetyl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z933_9STRA)

HSP 1 Score: 657 bits (1694), Expect = 1.120e-237
Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 1
Query:    1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQAAHSLAQQGAALVRWP 1041
            DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQAAHSLAQQGAALVRWP
Sbjct:    1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQAAHSLAQQGAALVRWP 347          
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Match: D7FY69_ECTSI (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY69_ECTSI)

HSP 1 Score: 370 bits (949), Expect = 2.000e-124
Identity = 197/338 (58.28%), Postives = 230/338 (68.05%), Query Frame = 1
Query:    1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDA--GA---PFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQAA 999
            DVY V LP  HRFPM KYR+VRE +Q EL G                     +     +F+VSP AS DDL TTH   YV R   G  T +E+R VGFPWSE  V R+LSS+GGTVAA HAVC     RD   GA   P  LF+GH+AGGTHHAF DRGEGFCVFSDIAVAANVALRD+ E +R+ILI+D DVHQGNGNA LF     V TFS+HCKANYFS ++ SD+D+EV+  AGD+ YLSL+ + +P L+D VRPDL+FYQ GVDPL  DRLG L LTREGL  RNR+VY  AL R    V+TMGGGYP+D+   SED+  IV +H DVY  AA
Sbjct:   15 DVYRVDLPDGHRFPMEKYRLVREGLQGELLGR-------------------VNGIPAVSFAVSPTASLDDLCTTHDKGYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCADGELRDRRPGARRTPPSLFSGHIAGGTHHAFSDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQGNGNAVLFKSKPEVSTFSIHCKANYFSEKEDSDVDIEVEEGAGDEEYLSLLSERLPSLVDHVRPDLIFYQGGVDPLEHDRLGRLSLTREGLRLRNRLVYDTALARGIPTVLTMGGGYPKDLDPASEDFGHIVRSHRDVYEDAA 333          
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Match: A0A7S1U809_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U809_9STRA)

HSP 1 Score: 360 bits (924), Expect = 5.580e-120
Identity = 193/346 (55.78%), Postives = 233/346 (67.34%), Query Frame = 1
Query:    1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQ-RCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQAAHSLAQQGAALVR 1035
            DVYE PLP  HRFPM KYR+VR  +Q  L                           LA F VSPLAS +DL+TTHCP YV R LTG LTP E+R +GFPWSE  V+R +SS GGTVAAA AV      R        FAG VAGGTHHAFYD GEGFCVFSDIAVAAN ALR+HA  +R++L++DLDVHQGNGNA LFA + AV+T+S  C+ N FS R+ SD+DV V + AGDDAYL ++ + +P + ++VRP LVF+QAGVD L  DRLG L L+REGL +RN +VY   L  + TRLVVT+GGGYP+D++  S  +H IV AHADVY QA+  LA+   A  R
Sbjct:   63 DVYEFPLPEGHRFPMEKYRLVRRKLQHTLVPGG-----------------------LAAFDVSPLASREDLVTTHCPAYVDRFLTGELTPGENRCIGFPWSEAGVDRAVSSTGGTVAAARAVLEDGGPR--------FAGQVAGGTHHAFYDYGEGFCVFSDIAVAANCALREHAAWLRRVLVVDLDVHQGNGNAVLFADDPAVFTYSAQCEQNLFSKREASDVDVWVPSGAGDDAYLGMLRETLPAVFERVRPQLVFFQAGVDGLDADRLGRLGLSREGLRQRNDLVYDLVLGGKDTRLVVTLGGGYPKDLSTSSRPFHDIVDAHADVYVQASQRLARSSMAAAR 377          
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Match: F0YDD4_AURAN (Uncharacterized protein HDA n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDD4_AURAN)

HSP 1 Score: 342 bits (876), Expect = 2.180e-113
Identity = 189/338 (55.92%), Postives = 228/338 (67.46%), Query Frame = 1
Query:    1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQAAHSLAQ 1014
            DV+E PLP  HRFPM KYR+VRE +QAE                           + A F  SPLAS  DL TTHC  Y  R + G LT  E+RN+GFPWS   VNR LSS GGTVAAA AV     AR AG    + AGHVAGGTHHAF+DRGEGFCVFSDIAVAANV LRD+ ++V KIL++D+DVHQGNGNA LF G  AV TFSMHC  NYFS ++ SD+DVEV A AGD  YL L++ +V ++L     D+VF QAGVDP   DRLG L+LT +GL RRN+++  A L++   +VVTMGGGYP+++   S +Y AIV AHADVYR+AA + A+
Sbjct:   27 DVWEFPLPENHRFPMAKYRLVREALQAE--------------------------GVAAAFEPSPLASLTDLTTTHCRGYCERFVGGKLTAAENRNIGFPWSPAGVNRALSSTGGTVAAARAVAD---ARRAGGGLRV-AGHVAGGTHHAFFDRGEGFCVFSDIAVAANVLLRDYGDVVEKILVVDVDVHQGNGNAKLFEGAPAVTTFSMHCDGNYFSEKRASDVDVEVPAGAGDGEYLRLLKSYV-QMLAGGGADVVFLQAGVDPSEHDRLGKLRLTADGLRRRNKLLLDAFLRKGASVVVTMGGGYPKNLDPASPEYRAIVEAHADVYREAAAASAR 333          
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Match: A0A7S1IVC4_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IVC4_9EUGL)

HSP 1 Score: 338 bits (867), Expect = 5.190e-112
Identity = 180/337 (53.41%), Postives = 217/337 (64.39%), Query Frame = 1
Query:    1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQAAHSLA 1011
            DVY+VPLP  HRFPM KYRMVRE +Q  L                            A F VSPLA+  DL   H   YV R  TG  T  E+R VGFPWS   VNR+LSS+GGTVAA H VCT  A          FA H+AGGTHHAF D GEGFC+FSDIAVAA VALRD+ ++++KILI+DLDVHQGNGNA LF   D V+TFSMHCK NYFS +Q SD+D+E+     D  YL++++  + +L D+V+PDLVF+QAGVD  + D+LG + LTR GL RRNR VY  A+ R   +V+TMGGGYPRD+   S  +  IV  HADVY  A  +LA
Sbjct:   28 DVYKVPLPQGHRFPMEKYRMVRERLQCLLPQGE------------------------ALFEVSPLATTRDLCLVHDHTYVNRYRTGAFTDAENRKVGFPWSINSVNRSLSSVGGTVAATHMVCTGKA---------FFAAHLAGGTHHAFRDHGEGFCIFSDIAVAATVALRDYPKIIKKILIVDLDVHQGNGNAVLFKNEDRVFTFSMHCKQNYFSQKQTSDLDIELPKGCTDQEYLAVLQMHLARLFDRVQPDLVFFQAGVDVFYQDKLGKMLLTRGGLLRRNRHVYETAIFRQVPVVITMGGGYPRDVDPASTAFREIVEVHADVYVGAVEALA 331          
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Match: A0A7S4B912_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B912_CHRCT)

HSP 1 Score: 336 bits (861), Expect = 7.640e-111
Identity = 182/330 (55.15%), Postives = 216/330 (65.45%), Query Frame = 1
Query:    1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYR 990
            D+YEVPLP  HRFPM KYR+VR  +Q EL  S+                       LATF  SPLA+  DL T H   YV R +TG  TP+E+R VGFPWS   V R+LSS GGTVAA HAVC     R  GAP   FAGH+AGGTHHAF DRGEGFCVF+DIAVAA VALRD+ E V+++LI+DLDVHQGNG AA+FA N  V+TFSMHC  NYFS +Q SD+DVEV   A D  YL ++   +  L +QVRP L F+QAGVDP   D  G LK++  GL RRNR+VY  A +  + LV TMGGGYP+D+   S  +  +  AH DVYR
Sbjct:   42 DLYEVPLPPGHRFPMAKYRLVRLGLQRELEPSN-----------------------LATFLPSPLAAVSDLTTCHDATYVERYVTGTFTPQENRRVGFPWSIESVKRSLSSTGGTVAATHAVCN----RTPGAP--RFAGHLAGGTHHAFADRGEGFCVFNDIAVAACVALRDYKESVQRVLIVDLDVHQGNGCAAIFADNPNVFTFSMHCAGNYFSKKQNSDIDVEVQPGATDAEYLEILHSHLGNLFEQVRPQLTFFQAGVDPHEADAFGKLKISSAGLKRRNRLVYKEAARHNSLLVATMGGGYPKDLDQESASFFQVCQAHMDVYR 342          
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Match: A0A0M0J8G2_9EUKA (Histone deacetylase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J8G2_9EUKA)

HSP 1 Score: 325 bits (834), Expect = 1.400e-107
Identity = 169/324 (52.16%), Postives = 214/324 (66.05%), Query Frame = 1
Query:   43 MPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQAAHSLAQ 1014
            M KYR VRE +Q EL  +                        LATF  SPL S  DL   HC  YV+R L G LT  E R +GFPWS  HVNR LSS GGTVAAAHAVC + A         +FAGH+AGGTHHAF DRGEG+CVF+DIAVAA VALRDHA  V+++L++D DVHQGNG A++FAG++ V+T S HC+AN FSAR+ SD+DV++    GD+AYL  ++  +P L ++VRP L F+QAGVD    DR+G LKL+  G+ +RN +VY+AA +   RLVVTMGGGYP+D+   S  +H +V +H D YRQ A + A+
Sbjct:    1 MQKYRYVREALQRELPST------------------------LATFYESPLVSEKDLTLVHCEGYVSRFLGGQLTRDELRRIGFPWSPQHVNRALSSTGGTVAAAHAVCRADATA-------IFAGHIAGGTHHAFADRGEGYCVFNDIAVAAAVALRDHAARVQRVLVVDCDVHQGNGTASIFAGDERVFTASFHCEANLFSAREVSDLDVDLPPGVGDEAYLEALQAHLPGLFERVRPQLCFFQAGVDVHESDRIGKLKLSSAGIKKRNALVYAAAARHGARLVVTMGGGYPKDLDESSVHFHRVVQSHMDCYRQCASAHAR 293          
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Match: A0A7S1D7Q2_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D7Q2_CYCTE)

HSP 1 Score: 322 bits (826), Expect = 5.620e-106
Identity = 172/333 (51.65%), Postives = 222/333 (66.67%), Query Frame = 1
Query:    1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKL-LDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQA 996
            DVYEV LP  HRFPM KYR  RE+IQ  +  +                    +A +++   VSPLA++D++ITTH PDY+ R +TG+ T +E RNVGFPWSE  V R LSS GGTVAAA AVC +           +++ HVAGGTHHAF+DRGEGFCVFSDIAVAANV L+ +  LV+KILI+DLDVHQGNGNA LF G D V TFS+HC+ANYFS ++ SD+D+E+ A   D+ YL+ +  W+ ++ L +   DLVF+QAGVD L  DRLG + +T  G+ RRN++V+    +    LV+TMGGGYPR      E +  I+ AHA+VY QA
Sbjct:   14 DVYEVILPPHHRFPMDKYRQTRELIQQYMMDAMTTAT---------------TAGVVSDLRVSPLATWDEIITTHSPDYLYRFVTGDQTDEELRNVGFPWSEAGVKRALSSTGGTVAAACAVCDALLQSGDDRTHPVWSAHVAGGTHHAFFDRGEGFCVFSDIAVAANVVLQRYPSLVKKILIVDLDVHQGNGNAVLFQGRDDVITFSIHCEANYFSPKEESDLDIELPAGCTDETYLTTLRHWLKQIELREPNFDLVFFQAGVDILEQDRLGRMSITSTGVERRNQLVFEFCTRNNLPLVITMGGGYPRT----GEPWKPIIEAHANVYTQA 327          
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Match: A0A0G4EU19_VITBC (Hist_deacetyl domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EU19_VITBC)

HSP 1 Score: 322 bits (826), Expect = 6.200e-105
Identity = 175/338 (51.78%), Postives = 218/338 (64.50%), Query Frame = 1
Query:    1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFC--LFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAAL---QRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQAA 999
            D++EV LP  H+FPM KYR VR  +Q  L  ++                      + A+F+ SPLAS +DL TTHCP YV     G+L P + R +GFP     VNR LSS+GGTVAA   VC +   +  G      LFAGH+AGGTHHAF DRGEGFC FSDIAVAANVALRD+A+++ +ILI+DLDVHQGNGNA LF     V+T S+HC ANYFS ++ S +D+EV    GD AYLSL+ + +P ++ + RPDL+FYQ+GVD L  DR G L L+R GL  RNR+VY  A+        +VVTMGGGYPRD+   S  Y  +VSAHADVY  AA
Sbjct:   58 DLFEVTLPPDHKFPMAKYREVRLRLQRLLGRTTNTNTDSRDQGNA----------VWASFAPSPLASIEDLHTTHCPSYVRAFCEGSLDPMQYRRIGFPRGHESVNRALSSVGGTVAATRDVCLALRRQRKGQEPTRPLFAGHIAGGTHHAFRDRGEGFCAFSDIAVAANVALRDYADVIERILIVDLDVHQGNGNAVLFQDQSNVFTLSVHCTANYFSPKEASHVDIEVPEGTGDGAYLSLLAKTLPDIVREFRPDLIFYQSGVDCLKTDRFGKLSLSRGGLQTRNRLVYEMAMTDKHTPVPVVVTMGGGYPRDLEVESRSYQEVVSAHADVYVGAA 385          
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Match: A0A1Z5K2H7_FISSO (Hist_deacetyl domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K2H7_FISSO)

HSP 1 Score: 304 bits (779), Expect = 3.630e-99
Identity = 168/329 (51.06%), Postives = 211/329 (64.13%), Query Frame = 1
Query:    1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVY 987
            DVYEVPLP  HRFPM KY+ VR+++Q +LAGS                           F VSPLA+ ++L TTH  +YV     G  TP+E RNVGFPWS   V R  SS+GGTVAAA  VC+ P           +A H+AGGTHHAFYDRGEGFCVFSD+AVAANV L  +   +++IL++DLDVHQGNGNA LF  +  V+TFS+HC ANYFSARQ SD+D+E+  +  D+ YL  +  W+ +L +Q   DL+F+QAGVD L  DRLG + L+ EG+ RRN +VY  A +    LV+ MGGGYPR     SED+  I+ AHA VY
Sbjct:    5 DVYEVPLPPNHRFPMGKYKRVRKLVQHQLAGSENLQ-----------------------FLVSPLATTEELTTTHAFEYVQNFEKGYQTPQELRNVGFPWSPEGVLRAFSSVGGTVAAACHVCSQPN---------RWAAHLAGGTHHAFYDRGEGFCVFSDMAVAANVVLERYPH-IQRILLLDLDVHQGNGNAVLFQNDSQVFTFSLHCSANYFSARQRSDLDIELPPNCSDNTYLVTLRYWLQQL-EQQSYDLIFFQAGVDVLKEDRLGRMDLSLEGVRRRNGLVYEFAQRHQIPLVICMGGGYPR-----SEDWEPILEAHASVY 294          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z933_9STRA1.120e-237100.00Hist_deacetyl domain-containing protein n=1 Tax=Tr... [more]
D7FY69_ECTSI2.000e-12458.28Hist_deacetyl domain-containing protein n=1 Tax=Ec... [more]
A0A7S1U809_9STRA5.580e-12055.78Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
F0YDD4_AURAN2.180e-11355.92Uncharacterized protein HDA n=1 Tax=Aureococcus an... [more]
A0A7S1IVC4_9EUGL5.190e-11253.41Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S4B912_CHRCT7.640e-11155.15Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A0M0J8G2_9EUKA1.400e-10752.16Histone deacetylase n=1 Tax=Chrysochromulina tobin... [more]
A0A7S1D7Q2_CYCTE5.620e-10651.65Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A0G4EU19_VITBC6.200e-10551.78Hist_deacetyl domain-containing protein n=2 Tax=Vi... [more]
A0A1Z5K2H7_FISSO3.630e-9951.06Hist_deacetyl domain-containing protein n=2 Tax=Fi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:336921..341812 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|161438|e_gw1.17.208.1
Descriptionprotein deacetylase activity
COG categoryBQ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0123@1|root,KOG1344@2759|Eukaryota
Evalue3.29e-125
Seed ortholog2880.D7FY69
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionHistone deacetylase
Ec32 orthologEc-24_003590.1
TranscriptId161760
TrackFilteredModels1
ProteinId161438
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161438gene_3351Tribonema minus UTEX_B_3156 geneContig_17 336921..341812 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|161438Trimin1|161438|e_gw1.17.208.1Tribonema minus UTEX_B_3156 polypeptideContig_17 336921..341812 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3351_1exon_3351_1Tribonema minus UTEX_B_3156 exonContig_17 336921..337211 +
exon_3351_2exon_3351_2Tribonema minus UTEX_B_3156 exonContig_17 337970..338136 +
exon_3351_3exon_3351_3Tribonema minus UTEX_B_3156 exonContig_17 338881..338992 +
exon_3351_4exon_3351_4Tribonema minus UTEX_B_3156 exonContig_17 339665..339826 +
exon_3351_5exon_3351_5Tribonema minus UTEX_B_3156 exonContig_17 340820..341014 +
exon_3351_6exon_3351_6Tribonema minus UTEX_B_3156 exonContig_17 341696..341812 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3351CDS_3351Tribonema minus UTEX_B_3156 CDSContig_17 336921..337211 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3351 ID=mRNA_3351|Name=jgi.p|Trimin1|161438|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1044bp|location=Sequence derived from alignment at Contig_17:336921..341812+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GATGTGTACGAGGTGCCGCTGCCAACAACCCACCGATTCCCAATGCCCAA
GTACCGGATGGTGAGAGAGATGATACAGGCAGAGCTGGCGGGGAGCAGCA
GCAGCGGCAGCAGCAGCAGCGGCAGCAGCAGCGGCGGCAGCAGCAGCAGC
AACAGCAGTGCTCCGATGCTCGCAACCTTCAGCGTGTCCCCGCTGGCGTC
GTACGATGACCTGATCACGACGCACTGCCCTGACTACGTCACGCGCGTGC
TCACCGGGAACCTGACGCCCAAGGAGAGCCGCAATGTCGGGTTCCCCTGG
AGCGAGGGGCACGTCAACCGCACGCTCAGCAGCATCGGCGGCACCGTCGC
GGCGGCGCACGCAGTGTGCACGAGCCCTGCCGCGCGCGACGCGGGCGCGC
CGTTCTGCCTCTTTGCGGGGCACGTCGCCGGCGGCACGCACCACGCCTTC
TACGACAGAGGGGAGGGGTTCTGCGTGTTCAGCGACATTGCCGTTGCCGC
AAATGTTGCCCTGCGCGACCACGCTGAGCTCGTGCGCAAGATCCTCATCA
TCGACCTCGATGTTCACCAGGGCAACGGCAACGCGGCGCTGTTTGCTGGC
AATGATGCCGTCTACACCTTCAGCATGCACTGCAAGGCAAACTACTTCAG
CGCGCGGCAGTACAGCGACATGGATGTTGAAGTTGATGCCAGCGCAGGCG
ACGACGCGTACCTGTCTCTCGTCGAGCAGTGGGTGCCCAAGCTGTTGGAC
CAAGTGCGTCCAGACCTGGTCTTTTACCAGGCAGGGGTGGACCCCCTGTG
GTGCGACAGGCTGGGACACCTCAAGCTGACGCGCGAGGGCCTCTCGCGGC
GCAATCGCATCGTGTATTCCGCCGCGCTGCAACGCTGCACGCGACTGGTT
GTCACCATGGGCGGCGGTTACCCAAGGGACATGACTGCGGGGTCGGAGGA
CTACCACGCTATCGTCAGCGCCCATGCGGATGTCTACCGTCAAGCCGCGC
ACTCGCTGGCGCAACAGGGCGCCGCGCTGGTGCGGTGGCCGTGA
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protein sequence of jgi.p|Trimin1|161438

>Trimin1|161438|e_gw1.17.208.1 ID=Trimin1|161438|e_gw1.17.208.1|Name=jgi.p|Trimin1|161438|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=348bp
DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSSSGSSSSGSSSGGSSSS
NSSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPW
SEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAF
YDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAG
NDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLD
QVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLV
VTMGGGYPRDMTAGSEDYHAIVSAHADVYRQAAHSLAQQGAALVRWP*
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mRNA from alignment at Contig_17:336921..341812+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3351 ID=mRNA_3351|Name=jgi.p|Trimin1|161438|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4892bp|location=Sequence derived from alignment at Contig_17:336921..341812+ (Tribonema minus UTEX_B_3156 )
GATGTGTACGAGGTGCCGCTGCCAACAACCCACCGATTCCCAATGCCCAA GTACCGGATGGTGAGAGAGATGATACAGGCAGAGCTGGCGGGGAGCAGCA GCAGCGGCAGCAGCAGCAGCGGCAGCAGCAGCGGCGGCAGCAGCAGCAGC AACAGCAGTGCTCCGATGCTCGCAACCTTCAGCGTGTCCCCGCTGGCGTC GTACGATGACCTGATCACGACGCACTGCCCTGACTACGTCACGCGCGTGC TCACCGGGAACCTGACGCCCAAGGAGAGCCGCAATGTCGGGGTAAGCAGC GACACACCGTCTTGTGTAGGCATCGCGCGCAGCCAAATAGGCTGCACCTC CCAGTTGATACCTCACACGCAACGCTGCAGGAGGGCTGGATGGTGCCATA GATTGCGTGTGGACCCTGTGTTCTGCTTGCTGCAGCATGGCTGAATGAAC CTGGCACCTTTGCCATGCATCTCATTTGCTTCTGTGTTGCATGCTGAGCG CTGGGATGTTTCCTGTGCCGTGCCGCGCGTCGCGCGACGCCGAAACCCTC GATCAAGTGGGCACGCTCCTCATGATCCTGCACGGCATCGACAGCCTCTA TTGTCTTTAATTGAGCAGTCCGGTGATTCTCAATGACTGGCTGCTTCTTT GGTCAGCGTGCCGCAAAGACGACTGTCCCTTGATGCGGCGATCCATGCTG CTAATGTTAACCCTAACCCCTCCTGTGCTCAGAAATCATGAAAACAATTT CATGTTCTGAGCGCCCACTGCCAGCATGCGTTGGTGCCGTCAACATCGTC GGCTGCACTCAACGGAGTGTCGATGCAGTCCTCGCAAGATGCGGCTGCAA GTCTCAACAGATGCTGCTGCGGCGCTCAACAGTTGCTGCTGCAGTGCTCA ACGGCTACAGCACTAAAGACGCAGGTGCAGTGCTCACCAGATTCGGCCGA ACAGCTCAACCTTACATGTTGCAGTGCTCAAATCGCTGCAACTGCAGTGC TCAGCGCCTCCCCCTTCAACTCGCGGCCCCGCCTCACGGCTCTGCGCAGT TCCCCTGGAGCGAGGGGCACGTCAACCGCACGCTCAGCAGCATCGGCGGC ACCGTCGCGGCGGCGCACGCAGTGTGCACGAGCCCTGCCGCGCGCGACGC GGGCGCGCCGTTCTGCCTCTTTGCGGGGCACGTCGCCGGCGGCACGCACC ACGCCTTCTACGACAGGTGAGCGCTGCTGCAGAAGACTTGAAGTTGTGAT GATGAAGGGTTGAGTTTGTGTGGAGAGCAAGTCAATGTCATTCATCGTGT GGCAAGAGTCATGCGGTGCGCGGCTCAGGAGGGCCGGTGTCTTGCTGTCA TGTTGCTGCCTGCGCCGACAGCGGCATGGTCGTGCATGCTGCAAAGTGCG AGCTTTGCTGCTGTAAAACCAAGTACGGTTGGGATAAGGGTCAGTGTTGG GTGTGGGTACGAGTAGATGTGGATATCAACACGGTCAGGCATGACTAAGC GTTCATCAGCGCCAGCTAGTCCAGGCACAGCACTGCAGCACCGCAGTTGG TCTACAAGGTCAGGTGGTGCGAGTGGCAGCAAGCGCTCTCGCCGATACCC TGACCGTACCCTCCCTGGCTGCTACTACCGTAAGCAGCTTGTAGACCATA GCCGTTGAGGCCTTGACGTTGAGCTCAACATGATGACAGCGCACAGTATC ACAGCCGTACCATTATACTGCTATGTCAACACTATGTGTGTCTTGTACAG CGCTCACATCTCACACCGCTGCATCTATTGTGGGGTGGGGCCGGTCATGC GTGTTCAGTGGCATTGTCACAACCGCCCATGCAGCCTTGAAATCACGCGC ATGCGGCCTGTCAAGCACCTACGGCTCGCCCAGAAGAAGGTCCCGTGTTT CAATCACTGTGACCCCACATATATGCGCGCGCTGCCAACTCTCCGCCGCT GCGGTCACAGAGGGGAGGGGTTCTGCGTGTTCAGCGACATTGCCGTTGCC GCAAATGTTGCCCTGCGCGACCACGCTGAGCTCGTGCGCAAGATCCTCAT CATCGACCTCGATGTTCACCAGGTACCGCACCTTTTGTCACATCGCCACA TGTATGCAGATTGTCACCCGCCACCAGATATACTGTGCAGGTTTGCAGGA GCAGTGCGCATGTTGCTGCACTTCCCGTTTGTTGATCTGCGTGTCAGCTC GTGCGCAAGATCCTCATCATTGAACTAGAAGGAGGAGAAAAAGCAAATAA AAGAGGTGTTGACGTTGACCTCGATGTGCACCAGGTAACGCCCCTGCCGC CTTTGTTCAATGTCGATGCGCCTATTGCCCGCAACACCCTGTTGAGCTCT AACGGGGGCTAGCAGGAGCTAAGCTGAGCTCAGTGCTCGGCTGTTGGTAC ATGTGCATTATTCAGAAGTGTGGAGGGGGCCAAGACACCTCATACATACA TGCTCTACCGTTTCAGTACTACTGCGTAGCGTCTATGTGCGCCAGCAGCT ACCGAAAACGCTGACTGGTCAGCCAGAACTGAATGAAGAATTGCCTCCAG TGGGCTTGCAATGTGCTGATGCTCAGGTGCCATGTGATGCGGTGCACTAC TATTTATTTGTGTTCAACATGCGCTGCTTGCAAGACATGGTGTCCTGAAA TCGTGTGCTGGTCCAACTCTGGTGATTGACGACACTACATACCTGCCCCA CGACAGTGCTCAGCGCCATCGTTTTTGCCCCCCCTGCTCCGCAGGGCAAC GGCAACGCGGCGCTGTTTGCTGGCAATGATGCCGTCTACACCTTCAGCAT GCACTGCAAGGCAAACTACTTCAGCGCGCGGCAGTACAGCGACATGGATG TTGAAGTTGATGCCAGCGCAGGCGACGACGCGTACCTGTCTCTCGTCGAG CAGTGGGTAAGTGCAGTTGGTCCTGCAACATTTGCTGGCTTGATTACTAT TTTTGACTAAAACGTCAATTTTATTTCTAGCAACTGAACACCGCTTTGGA ATGAGGCAAAAACAGTTGGAACTTGTGGTTAGCGACGCCCAGAGGTGAGC ACCGTGTCATGCTAGAGCAGCGCTCAGCAAGAGAGGCAGCGTGACGTGGG TCTGGTCGCACAGGCAGCGAATCTGCGCGGCAAAGATGGTCCATGTTCAC CATTTGTGTGTTCCAGTTGGTTGAGTGCGGCTGACGCTCTCGCCGCCGTT GATTGATTGGGTGAGTGTACCCGGCGTTGGGTTAGGGTTAGGGTTAGGCT GGCGGCAGACTGCGGAAGAAATGTTGCAGGGAAAGCATAGGTAGACTGAT GTAATGCCGGTGGCTGAGTCGCATGCTGGAGTTGTAGCTTCGCGAACGCG AGCGTGCTGTACAGTTTTGCCCTGTACTTTGCGAGCGACCGCAACTCAAC TGCATGGTGATGACGCTTCATGTGCGCTGTTGCTCTGTGGAACGCATGGA CAACTCTCGGAACGTCGCAGAAGTACTTGAAGCGCATTTCAAGGCCTTGA TGAGTGGCAGACGCGCGGCTATCTCGCCAATAGAAGTATTTGCTATCAGT TGCTCCCCGTGTGGCTCCCTTGCAGTTGCACAAACGCCTATATTTGAGGT AGGTTCAAGCTCTATCATGCGTGCTACTACAGACACAGGTGGACTCTCTG CGCTGCTACTGCGGTGACAAGGCAGCAGTGGCAGCGGCGTGGTACATGTG CTGCATAGCAGGTGTCGCTGCCTCTGCAGCCTCCGATGTATGCCTGCACA GGTGCCCAAGTTGAGTGGACCAACGACACTGGTGCCGTTGTCTTGCCTCC CCCCATGCTACCGACGTCAATGGCCTGGTGGGTACATAGCGAGCTCATCA CAAATAGTGCTTGCTCTCGCGTGCCATGTACCGTATGTATGTTGCTCAGG TGCCCAAGCTGTTGGACCAAGTGCGTCCAGACCTGGTCTTTTACCAGGCA GGGGTGGACCCCCTGTGGTGCGACAGGCTGGGACACCTCAAGCTGACGCG CGAGGGCCTCTCGCGGCGCAATCGCATCGTGTATTCCGCCGCGCTGCAAC GCTGCACGCGACTGGTTGTCACCATGGGCGGCGGTTACCCAAGGGTATGT GTGCGTACGCATACAATCGAGGCATACTACAGTAGGGAAACACAGTAGCG GGACTACATTAGCGGTAAATAGTTACTGAAGGGTACGCTTGCTGTTGCAG AAAAGTGGGGAAATGCAGCGGCGGGACTACTGTACATGCACAGTATCAGT GGTAGGACACAAGGGTCAACACGCACTTGAACTCCAGCATCATCAGGTCG CCTTGTACACGAGAGCCTTGTGACTCTTTCCACTGCTGCATTGCACTTTT GAAGGGACAATACATCACAGTCAGCAGTGGTGGCACCTAGGGGGTAGAAC AGGACTTCAACTTCAACTGAACGCAATAGCACAGAAGCCGGCGGGCAGTA TATCACGATGGAATACGTGCTCAGCGCTGCTGCTGCTGCTGCTGCGTGAC AGCAGTGCCAATACTTTCTCATGCAAGCGTCGCAATGTACTTTGCCTGAT CTTGCAAGGCCTGCAGCTGCTCTGAGCACCCACGCAGTGCGTGTTTCTTG ACCTCCAGCACACGTGCGCCTGGCGTTGTGCGCAGACTGCTGTCGACGAC GGCGCAGAAACGCGCTGCGAAACAACCCTGTTGCAGTCCAAACATGTTGC TGTAGCAGCGTGTTCCGCAACACTGCTCTCCCGCTGATTGCGTGCACCGC TGCTGTGCTGATCATCGATGTACAGGACATGACTGCGGGGTCGGAGGACT ACCACGCTATCGTCAGCGCCCATGCGGATGTCTACCGTCAAGCCGCGCAC TCGCTGGCGCAACAGGGCGCCGCGCTGGTGCGGTGGCCGTGA
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Coding sequence (CDS) from alignment at Contig_17:336921..341812+

>mRNA_3351 ID=mRNA_3351|Name=jgi.p|Trimin1|161438|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1044bp|location=Sequence derived from alignment at Contig_17:336921..341812+ (Tribonema minus UTEX_B_3156 )
GATGTGTACGAGGTGCCGCTGCCAACAACCCACCGATTCCCAATGCCCAA
GTACCGGATGGTGAGAGAGATGATACAGGCAGAGCTGGCGGGGAGCAGCA
GCAGCGGCAGCAGCAGCAGCGGCAGCAGCAGCGGCGGCAGCAGCAGCAGC
AACAGCAGTGCTCCGATGCTCGCAACCTTCAGCGTGTCCCCGCTGGCGTC
GTACGATGACCTGATCACGACGCACTGCCCTGACTACGTCACGCGCGTGC
TCACCGGGAACCTGACGCCCAAGGAGAGCCGCAATGTCGGGTTCCCCTGG
AGCGAGGGGCACGTCAACCGCACGCTCAGCAGCATCGGCGGCACCGTCGC
GGCGGCGCACGCAGTGTGCACGAGCCCTGCCGCGCGCGACGCGGGCGCGC
CGTTCTGCCTCTTTGCGGGGCACGTCGCCGGCGGCACGCACCACGCCTTC
TACGACAGAGGGGAGGGGTTCTGCGTGTTCAGCGACATTGCCGTTGCCGC
AAATGTTGCCCTGCGCGACCACGCTGAGCTCGTGCGCAAGATCCTCATCA
TCGACCTCGATGTTCACCAGGGCAACGGCAACGCGGCGCTGTTTGCTGGC
AATGATGCCGTCTACACCTTCAGCATGCACTGCAAGGCAAACTACTTCAG
CGCGCGGCAGTACAGCGACATGGATGTTGAAGTTGATGCCAGCGCAGGCG
ACGACGCGTACCTGTCTCTCGTCGAGCAGTGGGTGCCCAAGCTGTTGGAC
CAAGTGCGTCCAGACCTGGTCTTTTACCAGGCAGGGGTGGACCCCCTGTG
GTGCGACAGGCTGGGACACCTCAAGCTGACGCGCGAGGGCCTCTCGCGGC
GCAATCGCATCGTGTATTCCGCCGCGCTGCAACGCTGCACGCGACTGGTT
GTCACCATGGGCGGCGGTTACCCAAGGGACATGACTGCGGGGTCGGAGGA
CTACCACGCTATCGTCAGCGCCCATGCGGATGTCTACCGTCAAGCCGCGC
ACTCGCTGGCGCAACAGGGCGCCGCGCTGGTGCGGTGGCCGTGA
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