mRNA_3273 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|138891
Unique Name	mRNA_3273
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|138891 vs. uniprot
Match: A0A835ZFW1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFW1_9STRA)

HSP 1 Score: 286 bits (733), Expect = 5.080e-98
Identity = 142/142 (100.00%), Postives = 142/142 (100.00%), Query Frame = 1

Query:    1 LPIDDHRDEILQHINDHRVTIIHGETGCGKSSRVPLMLLEELGSGRHGARMFVSQPRRIAAKALMDRVRQASCEDLIGMRLGHGMRTEGPQTRVWFVTAGYLVRLLAHHPEAFSEHTHLIIDEVHERSVDTDILCLLAKRLL 426
            LPIDDHRDEILQHINDHRVTIIHGETGCGKSSRVPLMLLEELGSGRHGARMFVSQPRRIAAKALMDRVRQASCEDLIGMRLGHGMRTEGPQTRVWFVTAGYLVRLLAHHPEAFSEHTHLIIDEVHERSVDTDILCLLAKRLL
Sbjct:    1 LPIDDHRDEILQHINDHRVTIIHGETGCGKSSRVPLMLLEELGSGRHGARMFVSQPRRIAAKALMDRVRQASCEDLIGMRLGHGMRTEGPQTRVWFVTAGYLVRLLAHHPEAFSEHTHLIIDEVHERSVDTDILCLLAKRLL 142

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BLAST of jgi.p|Trimin1|138891 vs. uniprot
Match: A0A7S2SUV2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUV2_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.740e-58
Identity = 100/155 (64.52%), Postives = 113/155 (72.90%), Query Frame = 1

Query:    1 LPIDDHRDEILQHINDHRVTIIHGETGCGKSSRVPLMLLEELGSGRHG------------ARMFVSQPRRIAAKALMDRVRQASCE-DLIGMRLGHGMRTEGPQTRVWFVTAGYLVRLLAHHPEAFSEHTHLIIDEVHERSVDTDILCLLAKRLL 426
            LPI DH D I  H+ DHR+TIIHGETGCGKSS VPLMLL    + R              A+MFV+QPRRIAA++L  RVRQ S E DL+G+RLGHG R E  QTRVWF T GY+  LLAHH E F +HTHLIIDEVHERS+DTDILCLLA+RLL
Sbjct:   70 LPIHDHEDTICNHVADHRITIIHGETGCGKSSTVPLMLLRHHDARREDKAFRGDPMYKKPAKMFVTQPRRIAARSLCQRVRQVSKEPDLVGLRLGHGERDEKSQTRVWFATVGYVALLLAHHQEKFRDHTHLIIDEVHERSIDTDILCLLARRLL 224

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BLAST of jgi.p|Trimin1|138891 vs. uniprot
Match: A0A3P3YNW4_PLABS (Uncharacterized protein n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YNW4_PLABS)

HSP 1 Score: 191 bits (485), Expect = 1.220e-53
Identity = 93/143 (65.03%), Postives = 120/143 (83.92%), Query Frame = 1

Query:    1 LPIDDHRDEILQHINDHRVTIIHGETGCGKSSRVPLMLLE-ELGSGRHGARMFVSQPRRIAAKALMDRVRQASCEDLIGMRLGHGMRTEGPQTRVWFVTAGYLVRLLAHHPEAFSEHTHLIIDEVHERSVDTDILCLLAKRLL 426
            LPID HRD I+ HI+ HRVT+I GETGCGKSSR+P M+L+ E+  GR   RM VSQPRRIAA+AL +R+R +    + G+R+GHG R+E PQTR+WFVT+GYLV+ ++HHP+AF++HTHLIIDEVHERSVD+D+LC+LA+RLL
Sbjct:  579 LPIDAHRDRIIDHIDRHRVTVIQGETGCGKSSRIPSMILDAEVRRGRL-PRMMVSQPRRIAARALTERLRTSRHGPVYGLRMGHGERSETPQTRIWFVTSGYLVQYMSHHPDAFAQHTHLIIDEVHERSVDSDLLCMLARRLL 720

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BLAST of jgi.p|Trimin1|138891 vs. uniprot
Match: A0A7S4MMP8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MMP8_9STRA)

HSP 1 Score: 184 bits (468), Expect = 2.370e-51
Identity = 98/149 (65.77%), Postives = 116/149 (77.85%), Query Frame = 1

Query:    1 LPIDDHRDEILQHINDHRVTIIHGETGCGKSSRVPLMLLE----ELGSGRHGARMFVSQPRRIAAKALMDRVRQASCE--DLIGMRLGHGMRT-EGPQTRVWFVTAGYLVRLLAHHPEAFSEHTHLIIDEVHERSVDTDILCLLAKRLL 426
            LPID+H +EIL+ I + RVTII GETGCGKSSRVP+MLL     E  S     +MF+SQPRRIAAK+L +RVRQ   +  D I +R+GHG+R  E P TR WFVT GYLVRLLA+HP++F+ HTHLIIDEVHERSVDTDILCLL +RLL
Sbjct:  669 LPIDEHEEEILRTIAEQRVTIIQGETGCGKSSRVPVMLLRAPPPEPTSNARSVKMFISQPRRIAAKSLAERVRQCEPDLRDCIALRMGHGVREYECPSTRAWFVTTGYLVRLLANHPKSFTSHTHLIIDEVHERSVDTDILCLLCRRLL 817

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BLAST of jgi.p|Trimin1|138891 vs. uniprot
Match: A0A0H5R4P4_9EUKA (Uncharacterized protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R4P4_9EUKA)

HSP 1 Score: 176 bits (447), Expect = 2.530e-51
Identity = 86/142 (60.56%), Postives = 108/142 (76.06%), Query Frame = 1

Query:    1 LPIDDHRDEILQHINDHRVTIIHGETGCGKSSRVPLMLLEELGSGRHGARMFVSQPRRIAAKALMDRVRQASCEDLIGMRLGHGMRTEGPQTRVWFVTAGYLVRLLAHHPEAFSEHTHLIIDEVHERSVDTDILCLLAKRLL 426
            LPID HR +IL HI  +RVT+I GETGCGKSSR+P M+ E         RMFVSQPRRIAA+AL  R+R      + G+R+GHG R E  +TRVWFVT+GYLV+ L+H+  +F +HTHLIIDEVHERS+D+D+LC+LA+RLL
Sbjct:    4 LPIDLHRQQILDHIEKNRVTVIQGETGCGKSSRIPQMIYESELDHNRTVRMFVSQPRRIAARALTSRLRTTEYGQIYGLRMGHGERFETSETRVWFVTSGYLVQYLSHNSASFRDHTHLIIDEVHERSIDSDLLCMLARRLL 145

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BLAST of jgi.p|Trimin1|138891 vs. uniprot
Match: A0A8J2X0N8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X0N8_9STRA)

HSP 1 Score: 181 bits (459), Expect = 3.800e-50
Identity = 93/143 (65.03%), Postives = 111/143 (77.62%), Query Frame = 1

Query:    1 LPIDDHRDEILQHINDHRVTIIHGETGCGKSSRVPLMLLEELGSGRHGARMFVSQPRRIAAKALMDRVRQASCE-DLIGMRLGHGMRTEGPQTRVWFVTAGYLVRLLAHHPEAFSEHTHLIIDEVHERSVDTDILCLLAKRLL 426
            LPID H D+I +H+  HRVT+IHGETGCGKSSRVPL+LLE        A+MFVSQPRRIAA+AL DRVR    + D I +RLGHG+R E    R+ FVT GYLVRL+AHHPE+  EH+H+I+DEVHER+VD DILCLL +RLL
Sbjct:    3 LPIDAHADKIAEHVARHRVTVIHGETGCGKSSRVPLILLE----ADPDAKMFVSQPRRIAARALCDRVRDTHSDPDDIALRLGHGVRDEALDARIIFVTCGYLVRLVAHHPESLREHSHVIVDEVHERTVDADILCLLVRRLL 141

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BLAST of jgi.p|Trimin1|138891 vs. uniprot
Match: A0A0H5QNT9_9EUKA (Uncharacterized protein n=2 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5QNT9_9EUKA)

HSP 1 Score: 176 bits (447), Expect = 1.560e-48
Identity = 86/142 (60.56%), Postives = 108/142 (76.06%), Query Frame = 1

Query:    1 LPIDDHRDEILQHINDHRVTIIHGETGCGKSSRVPLMLLEELGSGRHGARMFVSQPRRIAAKALMDRVRQASCEDLIGMRLGHGMRTEGPQTRVWFVTAGYLVRLLAHHPEAFSEHTHLIIDEVHERSVDTDILCLLAKRLL 426
            LPID HR +IL HI  +RVT+I GETGCGKSSR+P M+ E         RMFVSQPRRIAA+AL  R+R      + G+R+GHG R E  +TRVWFVT+GYLV+ L+H+  +F +HTHLIIDEVHERS+D+D+LC+LA+RLL
Sbjct:    4 LPIDLHRQQILDHIEKNRVTVIQGETGCGKSSRIPQMIYESELDHNRTVRMFVSQPRRIAARALTSRLRTTEYGQIYGLRMGHGERFETSETRVWFVTSGYLVQYLSHNSASFRDHTHLIIDEVHERSIDSDLLCMLARRLL 145

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BLAST of jgi.p|Trimin1|138891 vs. uniprot
Match: A0A7S3GZ88_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GZ88_9STRA)

HSP 1 Score: 164 bits (415), Expect = 8.170e-48
Identity = 79/142 (55.63%), Postives = 107/142 (75.35%), Query Frame = 1

Query:    1 LPIDDHRDEILQHINDHRVTIIHGETGCGKSSRVPLMLLEELGSGRHGARMFVSQPRRIAAKALMDRVRQASCEDLIGMRLGHGMRTEGPQTRVWFVTAGYLVRLLAHHPEAFSEHTHLIIDEVHERSVDTDILCLLAKRLL 426
            LP+D HR+ IL+HI  +RVTIIHGETGCGKSSR+P  LL++  +     ++FV+QPRRI    ++ R+R A   D +G+R+GHG+R E  +T+V +VT GYLV+L+AHHPEA    TH++IDEVHERSVD D++CLL + LL
Sbjct:   84 LPVDAHRETILRHIKSNRVTIIHGETGCGKSSRLPQFLLDDAEASNRPCKIFVAQPRRIGVVGMLKRLRPA-LGDKVGIRMGHGVRDETAETKVHYVTTGYLVQLVAHHPEALKRCTHIVIDEVHERSVDGDLICLLVRDLL 224

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BLAST of jgi.p|Trimin1|138891 vs. uniprot
Match: K0RU78_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RU78_THAOC)

HSP 1 Score: 173 bits (438), Expect = 2.600e-47
Identity = 97/151 (64.24%), Postives = 111/151 (73.51%), Query Frame = 1

Query:    1 LPIDDHRDEILQHINDHRVTIIHGETGCGKSSRVPLMLLE----ELGSGRHGARMFVSQPRRIAAKALMDRVRQASCE----DLIGMRLGHGMRT-EGPQTRVWFVTAGYLVRLLAHHPEAFSEHTHLIIDEVHERSVDTDILCLLAKRLL 426
            LPID+H  EIL+ +   R+TIIHGETGCGKSSRVP MLL     E  +     +M VSQPRRIAAKAL +RVR  SCE    D IG+R+GHG+R  E   TR WFVT GY+VRLLA+HP  F  H+HLIIDEVHERSVDTDILCLL +RLL
Sbjct:  662 LPIDEHEGEILRAVRTQRITIIHGETGCGKSSRVPCMLLRASPPEPTATAPEVKMIVSQPRRIAAKALAERVR--SCEPDLADKIGLRMGHGIREYETKDTRAWFVTTGYVVRLLANHPGWFDTHSHLIIDEVHERSVDTDILCLLCRRLL 810

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BLAST of jgi.p|Trimin1|138891 vs. uniprot
Match: A0A8J2SN25_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SN25_9STRA)

HSP 1 Score: 172 bits (435), Expect = 6.630e-47
Identity = 92/142 (64.79%), Postives = 111/142 (78.17%), Query Frame = 1

Query:    1 LPIDDHRDEILQHINDHRVTIIHGETGCGKSSRVPLMLLEELGSGRHGARMFVSQPRRIAAKALMDRVRQASCEDLIGMRLGHGMRTEGPQTRVWFVTAGYLVRLLAHHPEAFSEHTHLIIDEVHERSVDTDILCLLAKRLL 426
            LPID HR EIL  I  +RVTI+ GETGCGKSSR+PLMLLE        A+MFVSQPRRIAA+AL DRVRQ+  E+ +G+RLG G R E  +TR+WF + GYLVRL+A HP+A   HTH+I+DEVHERSVDT+ILCLL +RL+
Sbjct:  447 LPIDAHRLEILDTIARNRVTIVCGETGCGKSSRLPLMLLENDSK----AKMFVSQPRRIAARALCDRVRQSLGEE-VGLRLGFGERDESRKTRLWFCSTGYLVRLVAAHPQALKTHTHIIVDEVHERSVDTEILCLLLRRLV 583

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|138891 vs. uniprot

BLAST of jgi.p|Trimin1|138891 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZFW1_9STRA	5.080e-98	100.00	P-loop containing nucleoside triphosphate hydrolas...	[more]
A0A7S2SUV2_9STRA	1.740e-58	64.52	Hypothetical protein (Fragment) n=1 Tax=Rhizochrom...	[more]
A0A3P3YNW4_PLABS	1.220e-53	65.03	Uncharacterized protein n=2 Tax=Plasmodiophora bra...	[more]
A0A7S4MMP8_9STRA	2.370e-51	65.77	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
A0A0H5R4P4_9EUKA	2.530e-51	60.56	Uncharacterized protein n=1 Tax=Spongospora subter...	[more]
A0A8J2X0N8_9STRA	3.800e-50	65.03	Hypothetical protein n=1 Tax=Pelagomonas calceolat...	[more]
A0A0H5QNT9_9EUKA	1.560e-48	60.56	Uncharacterized protein n=2 Tax=Spongospora subter...	[more]
A0A7S3GZ88_9STRA	8.170e-48	55.63	Hypothetical protein (Fragment) n=1 Tax=Spumella e...	[more]
K0RU78_THAOC	2.600e-47	64.24	Uncharacterized protein (Fragment) n=1 Tax=Thalass...	[more]
A0A8J2SN25_9STRA	6.630e-47	64.79	Hypothetical protein n=2 Tax=Pelagomonas calceolat...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_14	contig	Contig_14:1298754..1301897 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|138891\|gw1.14.70.1
Description	helicase superfamily c-terminal domain
COG category	A
Max annot lvl	2836\|Bacillariophyta
EggNOG OGs	COG1643@1\|root,KOG0920@2759\|Eukaryota,2XEX5@2836\|Bacillariophyta
Evalue	4.27e-48
Seed ortholog	159749.K0RU78
Hectar predicted targeting category	other localisation
TranscriptId	139213
Track	FilteredModels1
ProteinId	138891

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|138891	gene_3273	Tribonema minus UTEX_B_3156	gene	Contig_14 1298754..1301897 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|138891	Trimin1\|138891\|gw1.14.70.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_14 1298754..1301897 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_3273_4	exon_3273_4	Tribonema minus UTEX_B_3156	exon	Contig_14 1298754..1298810 -
exon_3273_3	exon_3273_3	Tribonema minus UTEX_B_3156	exon	Contig_14 1299623..1299777 -
exon_3273_2	exon_3273_2	Tribonema minus UTEX_B_3156	exon	Contig_14 1300664..1300802 -
exon_3273_1	exon_3273_1	Tribonema minus UTEX_B_3156	exon	Contig_14 1301823..1301897 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_3273	CDS_3273	Tribonema minus UTEX_B_3156	CDS	Contig_14 1301823..1301897 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_14:1298754..1301897-
coding sequence from alignment at Contig_14:1298754..1301897-

spliced messenger RNA

>mRNA_3273 ID=mRNA_3273|Name=jgi.p|Trimin1|138891|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=426bp|location=Sequence derived from alignment at Contig_14:1298754..1301897- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CTGCCCATTGACGACCACCGCGATGAGATTCTGCAGCACATCAACGACCA
CAGGGTCACCATCATACACGGAGAGACGGGATGTGGCAAGAGCTCTCGCG
TCCCCCTCATGCTCCTGGAAGAACTTGGCTCTGGCCGCCACGGCGCCCGC
ATGTTTGTGTCGCAACCACGCCGCATCGCCGCCAAAGCCCTGATGGATCG
TGTCAGGCAGGCAAGCTGCGAGGACCTCATTGGCATGCGCCTGGGCCACG
GCATGAGAACAGAGGGCCCCCAGACGCGCGTGTGGTTTGTGACGGCGGGA
TACCTAGTGCGGCTCTTGGCGCATCACCCTGAGGCGTTCAGCGAGCACAC
GCACCTCATCATTGACGAGGTGCACGAGCGCTCTGTCGACACGGACATAC
TGTGCCTCCTGGCCAAGCGTCTGCTG

protein sequence of jgi.p|Trimin1|138891

>Trimin1|138891|gw1.14.70.1 ID=Trimin1|138891|gw1.14.70.1|Name=jgi.p|Trimin1|138891|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=142bp
LPIDDHRDEILQHINDHRVTIIHGETGCGKSSRVPLMLLEELGSGRHGAR
MFVSQPRRIAAKALMDRVRQASCEDLIGMRLGHGMRTEGPQTRVWFVTAG
YLVRLLAHHPEAFSEHTHLIIDEVHERSVDTDILCLLAKRLL

mRNA from alignment at Contig_14:1298754..1301897-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3273 ID=mRNA_3273|Name=jgi.p|Trimin1|138891|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3144bp|location=Sequence derived from alignment at Contig_14:1298754..1301897- (Tribonema minus UTEX_B_3156 )
CTGCCCATTGACGACCACCGCGATGAGATTCTGCAGCACATCAACGACCA
CAGGGTCACCATCATACACGGAGAGGTATGTATGTGTGCATGTCTCACTG
AGACTGAGGCACCATACACTGCGTAGCGATGCAGTCTTATGGATGTTCCC
TTCTTGAGAGTACCTACGCTGAAACGGTGTAAAATTGCAGATTTTTGTTG
TACTCTCTGCGCAACTGATATTTCTGATTTAAGCAACACTCACATCTTTT
GTGATTATTTGCATCGACAAGTGTTGTTGGTTATGATTGGGTAAGCCACC
CACTGACAAGCGCCACATCAGAGAGATCATCCTCAACGTCAGTGCTCAAT
GTTGGGCTTGCTACGAGGCATTCGTTGGGTTGGCATAGTCCGGCACATGC
TGCACTGCTGCAAGCGCGTCGCCATGTGAGGTAATCAGCTGAGCACTGGG
GTCGTCTGCTGAGCAGTGCTGCACATGCTCACTGAGGCAATTGAGGTAAT
TGGTCACAGGACATGGCATTGCACGTCTTGAAGTGCGCATGTGCCATAGC
ATCACTCCAGGTGGTTTGTTGCGGTTGATGGCGGTAGTGACTGCTCACAA
AAGGGTGCTGTAGACTGTCATCGCGACAATGATTGCAAAAACGGCTTTGT
ACAGCCGATGCGGATTGCCGCGTTCGTGCACTCTTTCCCCGTGATTGGTC
ATCGCATATTGTGCTATCGTGTGCGTAGATGGTACTGCAAGCAGGTTGGC
GCACGTATACAATCTGGAATGACAAAAGGTCTGTCGTCAGCAACTGGTGA
AAGGAGCAACTGGTGAATTGACATTTCTGCAGCTCCAAGTGAAATATAAT
GAAATTGCTACTCACGGTGATCTCCAATGTGCATTGACACACTTGATCAC
GAACTGCGTAGCAAGTTTGACATGGACCGTCTGGGCTTTTTGGCGCCCTC
AGCGAAAATGCACTAAAGTACGATTTATGGCACCACTACCTTTTATCGTC
ATTTGGCCACATCCACCTGCAAGTGTGCCGCTGCCTCGTACATGTGCGGG
ATACCCTCACCCACCCCTGTTACCTCTGTCATGTCATCGTTACAGACGGG
ATGTGGCAAGAGCTCTCGCGTCCCCCTCATGCTCCTGGAAGAACTTGGCT
CTGGCCGCCACGGCGCCCGCATGTTTGTGTCGCAACCACGCCGCATCGCC
GCCAAAGCCCTGATGGATCGTGTCAGGCAGGCAAGTGTCTTGCTGTCAAG
TTGTGATGCAGATTTGCTCATTGCATTGCAGCCGCAATGAGGTCGTTGAT
GAGTCAATACCTCTAGTACATTTACTTGAAGTAATGTTTGTGTCGCAACC
ACGCCGCATCGCCGCCAAGGCGCTCATGGATCGTGTCAGGCAGGCAAGTG
TCTCGCTGAAGTCCTGTTATGGATGTGCTCACTGCATTGCAGCAATGACG
AAGTCATTGATGAGTCTACATCTATACTATATTGACTTGAGGTAGTGTTC
GTGTGGCAACCATGTCTCATCGCCGCAAAGGCGCTGATGGATCGTGTCAG
GCAGGCGTCTAAATTTCGAGTTGTGATGCAGAGTTGCTCACTGCATTGCA
GCACAAACGAGGTCGTCGATGAGACTATATTTCTGCTCTACCGCATCTTG
AAGTAATACTTGTGTCGCAACGGCTCATGGATCTGGAAAGCGGGAGATTG
CACTCGCAATGCCATTCTCTTTGCTGAGAATGTATTGCGGCAGACATGAG
CTCGGCTGTTGTGTGTGTGAGCAGGAGTTGAGATTTCTGCTATCGTTCAA
CCACAAGTTTTCTTTGTTTGTGTCGCCGCAAAAGCGCCGGCGCAGCAGAT
CAGACTGGAACCTGTCCTGCTATGGTCATGATGCAACTGTGCCTACTGTG
TGACGTACATAATGATATAGTGCCATAACATCACGGGGCTGGCCTTTGAA
ACTCCTGTCGCATATGGGACGCGTTGGGGGTTGGCATGCCAACCCCCCCC
CGAGCTGCAAGCAGTGCCAAGCCCTCAGCCTGCGCCAGACGTTGGTCACA
TTTCTGACACCTGACACAGTACTGATGTGCTCGGGTGTTGTTGTTTCTAC
TCTGTCATCACAGGCACCAGGCTGCGAGGACCTCATTGGCATGCGCCTGG
GCCACGGCATGAGAACAGAGGGCCCCCAGACGCGCGTGTGGTTTGTGACG
GCGGGATACCTAGTGCGGCTCTTGGCGCATCACCCTGAGGCGTTCAGCGA
GCACACGCACCTCATCATTGACGAGGTGAGTACTTGAGGTTTTTTCTTAG
AAGTATGACAGCGGGATACCTAGTGCGACTCGCGCATCACCCCGAGGCGT
TCAGCGAGCACACGCGCCTCATCATCGTTGACGAGGTGAGTGCACAATCA
GTACTTGAAGTAGTTGCTTGAAGTATGCATGTTCCATTTTCCAAAAGAGC
AGTCGCATGGTCTATTATAGAAGCATGTTTTGCCTGTGCTTTGGGAGCAT
TTGAGGAATTTGAATCGTCATTTGATGCGGAGACACCCGCATCGCGCGGA
GGTGTGCTCAGCCAGCACAGGCACGTACAACATGATTGGTTTTGAGGCAA
GCTCTGCGGCAAATAGTGCAAAATAGTGCACTCACACTCAAGGCAGTAGG
AAGGAAAGGCTGCATCTGGCATTAGTCGCTTGGTCTAAGGCACCAGCATG
TCAAAGCACAGCCGTTGTTTGAGCACTATGTCCAATATCGGTGATTGTTG
AGCTGATGCTTGCAGTCATTCACCGGCTATTGCAGCGCTTGTGTGCAGCC
TGCCAAGGCTGGTAATAAATGCCTGCGGGCACACTTTGAATGATCATACC
TGCCGACCCTGTTGTCTCGGCATGCCTGCGCATGTATACTCGTAAATCCT
TGTTGTCTTGATGCATGTACCCTCCTCCTTCGTGTCGTGAGCAAGCAAGA
CATCAGCATACTCCTGACAATGATTTTCCGTGCGACATGTACTGTTTGCG
GCAACTTCCATGCTCATTATCCGCAAACTTCCTGGGCGCATACCTGAAGT
ATCACAACTGCAACCCTCCCGTGTATGTACTATGCAGGTGCACGAGCGCT
CTGTCGACACGGACATACTGTGCCTCCTGGCCAAGCGTCTGCTG

Coding sequence (CDS) from alignment at Contig_14:1298754..1301897-

>mRNA_3273 ID=mRNA_3273|Name=jgi.p|Trimin1|138891|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=426bp|location=Sequence derived from alignment at Contig_14:1298754..1301897- (Tribonema minus UTEX_B_3156 )
CTGCCCATTGACGACCACCGCGATGAGATTCTGCAGCACATCAACGACCA
CAGGGTCACCATCATACACGGAGAGACGGGATGTGGCAAGAGCTCTCGCG
TCCCCCTCATGCTCCTGGAAGAACTTGGCTCTGGCCGCCACGGCGCCCGC
ATGTTTGTGTCGCAACCACGCCGCATCGCCGCCAAAGCCCTGATGGATCG
TGTCAGGCAGGCAAGCTGCGAGGACCTCATTGGCATGCGCCTGGGCCACG
GCATGAGAACAGAGGGCCCCCAGACGCGCGTGTGGTTTGTGACGGCGGGA
TACCTAGTGCGGCTCTTGGCGCATCACCCTGAGGCGTTCAGCGAGCACAC
GCACCTCATCATTGACGAGGTGCACGAGCGCTCTGTCGACACGGACATAC
TGTGCCTCCTGGCCAAGCGTCTGCTG