mRNA_324 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|157546
Unique NamemRNA_324
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Match: A0A836CEX1_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEX1_9STRA)

HSP 1 Score: 781 bits (2018), Expect = 2.890e-285
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 1
Query:    1 MYLRGPILAAAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLTRYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVPVPVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALLSSASPDRQPEGWRDHLVAAVRQEAVNIDGDAATSPTSSTRDFESXXXXXXXXXXXXXSYTEA 1200
            MYLRGPILAAAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLTRYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVPVPVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALLSSASPDRQPEGWRDHLVAAVRQEAVNIDGDAATSPTSSTRDFESXXXXXXXXXXXXXSYTEA
Sbjct:    1 MYLRGPILAAAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLTRYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVPVPVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALLSSASPDRQPEGWRDHLVAAVRQEAVNIDGDAATSPTSSTRDFESXXXXXXXXXXXXXSYTEA 400          
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Match: A0A836CFT8_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT8_9STRA)

HSP 1 Score: 318 bits (814), Expect = 3.230e-103
Identity = 161/342 (47.08%), Postives = 220/342 (64.33%), Query Frame = 1
Query:   28 AAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLTRYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVPV-----PVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDG--GDFAITKFNRDATSIQFVYGIS-EALLSSASP 1029
            AA+L ATM +G+NLGNTLD A ++ D  V+ARRL A+R +G+ HVRIPV+W+P   + CR++ P FV  VE AV+ AI LG  VI+NAHHE WLT YDGS  M   F  +WR++A  F+  PQ+KL+FE+LNEP GTM           +P A  LTR LNA GY  +R++S  R+VLIQPN++G  + A   + TP +LPG G+D+YLA+T+HSY P  F  P GS++ F      EA + Q  + L+  +  + +     PVH+GEFGVGR N   RD+ +V  YYR  +  ARDA IP   WDDG   DF IT F+R+A  + F + ++ + L ++A+P
Sbjct:    5 AAELFATMGTGINLGNTLDNAQNNRDTEVIARRLTALRQKGFQHVRIPVTWQPMGCSKCRVNSPSFVALVEGAVNAAIALGFTVILNAHHEAWLTSYDGSSGMNAAFADLWRKVALHFKSVPQDKLLFELLNEPQGTM--------CPCTPAAQQLTRTLNATGYNAVRAISPTRIVLIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAITVHSYGPPKFALPKGSNAYFLDMADPEAAVCQHVKKLIAELLKLRLALGSTPVHLGEFGVGRENLADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRNANCVDFTFDLAGDVLGTTATP 338          
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Match: A0A836CL48_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL48_9STRA)

HSP 1 Score: 317 bits (812), Expect = 9.910e-103
Identity = 160/340 (47.06%), Postives = 221/340 (65.00%), Query Frame = 1
Query:   28 AAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLTRYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVPV-----PVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDG--GDFAITKFNRDATSIQFVYGISEALLSSAS 1026
            AA+L AT+ +G+NLGNTLDTA HS D +V+ RRL A+R +G+ HVRIPV+W+P   +  R++ P FV  VE AV  AI LG  VI+NAHHE WLT YD S AM   F  +WR+I+  F+  PQ+KL+FE+LNEP GTM           +P A  LTR LNA GY  +R+VS  R++LIQPN++G  + A   + TP +LPG G+D+YLAV++HSY P  F  P+GS++ F +    EA + +  ++L+  +  + +     PVH+GEFG+GR N   RD+ +V  YYR  +  ARDA IP   WDDG   DF IT F+RDAT + F + ++  +L +A+
Sbjct:    5 AAELFATLGTGINLGNTLDTAQHSRDTSVITRRLTALREKGFRHVRIPVTWQPMGCSTNRVNSPSFVAMVEGAVAAAIELGFTVILNAHHEAWLTAYDASPAMNAAFADLWRKISLHFKSVPQDKLLFELLNEPQGTM--------CPCTPAAQQLTRTLNATGYNAVRAVSPTRIILIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAVSVHSYGPPQFALPSGSNAYFLNMADPEAAVCKHVKTLIAELLKLRLALGSTPVHLGEFGIGRENFADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRDATFVNFTFDLAGEVLGTAT 336          
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Match: A0A836CFX5_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFX5_9STRA)

HSP 1 Score: 272 bits (695), Expect = 2.450e-85
Identity = 134/335 (40.00%), Postives = 208/335 (62.09%), Query Frame = 1
Query:   28 AAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLTR-YDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSV---PVPVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALLSS 1020
            A Q+L ++ +G+NLG   ++  HS D   +   L A++++G+GHVRIPV+W P    VC +D PEF+  ++ A D A+ LGL VI+NAHHE WL + YDGS A   +F  +WRRIA ++    Q +++FEVLNEP    G     G ++ +   + LTRK+N AGY GIR+VS  RVVL+QPN+ G+++    ++P    LPG G D+YL +  H+Y  + F    G +  + S   + AD+A+R   +++W  ++    V +H+GEFGVGR+++  RD+D+VRAYY+  S   R+  I   AW DGG FA+T  +   T + + +G+++ +L +
Sbjct:    5 ATQVLTSIGTGINLGQVFESKQHSRDADKIRPWLSAVKSKGFGHVRIPVTWYPGTAHVCMLDDPEFMHLLDDATDFAVKLGLTVIINAHHEDWLFQHYDGSAAYNTKFKELWRRIAAKYNAYTQQQVIFEVLNEPTAKFG----LGSAAATSACIDLTRKINCAGYAGIRAVSATRVVLVQPNNAGNIWSVPIVYPDKASLPGAGADKYLGIQFHTYDNYNFCLQGGRNDHYKSVADVSADVAKRLTMIVKWHGAIGKDTVAIHLGEFGVGRLDQRQRDADIVRAYYKLTSKLFREKRICVTAWSDGGWFALTLTDARQT-VTWPFGLADQVLKT 334          
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Match: A0A835Z601_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z601_9STRA)

HSP 1 Score: 266 bits (679), Expect = 6.830e-83
Identity = 134/335 (40.00%), Postives = 208/335 (62.09%), Query Frame = 1
Query:   25 AAAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLTR-YDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVP----VPVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALL 1014
            +A+Q+L  +  G+NLG T ++  +S  PA +   L  IR +G+GHVRIPV+W P +   C+++   F+  +++++++A+ +GL VI+N HHE W+   YDGS     +F  +W +IATR++  PQNKL+FEVLNEP G  G       S+ S E +ALTR +N  G   IR+V   R+VL+QPN MG+++   K++P+ + LPG G D+YL V  H+Y  + F    GS+  + S   L ADI +R E + +W  ++     V +H+GEFGVGR+++  RD+D+V+AYYR  S   R  GI   AW DGG F +   +   T +QF +G+++ ++
Sbjct:    5 SASQVLGDIGIGVNLGQTFESKMNSRQPAQVRPWLLGIRQKGFGHVRIPVTWYPGNSHACQLNDALFMQCLDNSIEYAVKIGLAVILNTHHEDWIIDGYDGSDLYNVKFKKLWTQIATRYKRYPQNKLIFEVLNEPSGKFGKPDE---SADSSECIALTRLINLVGLEAIRAVDSTRIVLVQPNAMGNVWSVPKVYPSKDTLPGSGADKYLGVQFHTYDHYKFCLQAGSNEYYKSLNELRADIQKRVEMIKKWHVTIGGNDVVALHLGEFGVGRLDQRQRDADIVKAYYRLTSLLYRQKGICVTAWSDGGWFNVASLDSRGT-VQFPFGLADMVI 335          
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Match: A0A835ZM96_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZM96_9STRA)

HSP 1 Score: 258 bits (659), Expect = 6.280e-80
Identity = 130/334 (38.92%), Postives = 204/334 (61.08%), Query Frame = 1
Query:   28 AAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWL-TRYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSV----PVPVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALL 1014
            A Q+L+ +  GLNLG   ++  +S  P  +   L A++A+G+GHVRIPV+W P+D   C +D  EFV  ++ A+ +A+ +GL +++NAHHE+WL   YDGS     +F ++W RIA ++R   Q +L+FEVLNEP G  G     G +S +   + LTR +N  GY GIR V   R+VL+QPND G+++   +++PT   LPG G D+ + +  H+Y  + F    G+++ + S   + ADI +R   L++W   +     V +H+GEFGVGR+++  RD+D+VRAYYR  S   RD  I   AW D G FA+T  +  +  + + +G+++ +L
Sbjct:    5 ATQILSEIGIGLNLGQVFESKQNSRRPDQVRPWLAAVKAKGFGHVRIPVTWYPSD--ACVLDDSEFVHLLDDAIQYAVKIGLTLVINAHHEKWLFDYYDGSDVFNAKFKALWSRIAYKYRAYTQQQLLFEVLNEPDGKFG----IGSASTTTGCIELTRTINRVGYEGIRYVDATRIVLVQPNDAGNIWAVPRVYPTKATLPGAGADKSVGIQCHTYDHYNFCLQGGTNAFYKSVDDISADIGKRVAMLMKWHTDIGGQDTVALHLGEFGVGRLDQRQRDADIVRAYYRITSKLFRDKSICCTAWSDNGWFALTTMDA-SRRVTWPFGLADQIL 331          
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Match: A0A1K1MUA2_9FLAO (Endoglucanase n=1 Tax=Sinomicrobium oceani TaxID=1150368 RepID=A0A1K1MUA2_9FLAO)

HSP 1 Score: 221 bits (564), Expect = 3.720e-65
Identity = 136/346 (39.31%), Postives = 189/346 (54.62%), Query Frame = 1
Query:   28 AAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRP------ADFAVCRIDV--PEFVDKVESAVDHAIGLGLVVIVNAHHEQWLT-RYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGG--SSQSPEALALTRKLNAAGYTGIRSV---SRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVPVPVHIGEFGVGRV-NRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALLSS 1020
            A +++  MK+G NLGNT D   ++T  + +   +D  +  G  H+RIPV+W        AD +   IDV  P F+D V+  VD+A+   + VI+N HHE WL   YDGS    D+F ++W  IAT FRD P N LVFEVLNEP GT+G   G G       P AL  TRK+N  GY  IR+    +  R+V++  N  G+     +++P    LPG G D YLA+ +HSY+PW+F G  GS+SAF      E+ +    + +    + + VPVH GEFGVGR  N   R++D+VR YY+  +       +    WDD G F +   N   T  QF YGI   +L +
Sbjct:   45 AGEIILDMKAGFNLGNTFDNGINTTTFSGIQPIVDLYKNAGMKHIRIPVTWMDRFESHLAD-SEGHIDVNHPRFLDLVQ-VVDYAVEQDMYVILNTHHEHWLKDHYDGSAGFNDKFHTLWTEIATYFRDYPVN-LVFEVLNEPEGTLGENDGSGPFPDPTDPTALEYTRKVNKVGYDAIRATGGNNATRLVMVGTNGQGNALYIDEVYPNKASLPGEGTDPYLAIQVHSYSPWSFCGETGSNSAFPGNSFFESGV----QDVSVHSKLLNVPVHYGEFGVGRSSNTAERNTDLVRGYYKTMADATLGQSMSYCVWDDRGWFGLV--NNSGT--QFTYGIVPFMLGN 379          
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Match: A0A1N6EXW3_9FLAO (Aryl-phospho-beta-D-glucosidase BglC, GH1 family n=4 Tax=Chryseobacterium group TaxID=2782232 RepID=A0A1N6EXW3_9FLAO)

HSP 1 Score: 219 bits (559), Expect = 1.890e-64
Identity = 128/344 (37.21%), Postives = 188/344 (54.65%), Query Frame = 1
Query:   25 AAAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVC-------RIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLT-RYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALAL--TRKLNAAGYTGIRSV---SRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVPVPVHIGEFGVGRV-NRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALL 1014
            +A +++A M  G NLGNT D   H T  A +   +D  +  G  HVRIP +W     +          ++ P F++ +++ +D+A+   L VI+N HHE WL   YDGS+    +F ++W  IAT F+D PQ KL+FEVLNEP G +G   G G      +ALAL  TRK+N  GY  IR+    + +R++++  N  G+      ++P+   LPGGG D YL++ +H+Y+PWAF G  GS++AF    S E  I    +++      + VPVH GEFGVGR  N   R++D+VR YYR  +       +  + WDD G FA+     + T   FV  I   +L
Sbjct:   42 SAKKIIADMGPGFNLGNTFDNGIHPTSLAAIKPVIDLYKNAGMKHVRIPTTWMDRFSSTLADNNGNINVNHPRFIE-LKAVIDYALSKDLYVILNTHHESWLKDHYDGSEQYDTKFRTLWTGIATYFKDYPQ-KLIFEVLNEPEGNLGELDGNGPFPDPTDALALQYTRKVNQVGYDAIRATHGNNEKRLIMVGTNGQGNALYISNVYPSKSSLPGGGNDDYLSIQVHTYSPWAFCGETGSNAAFPGTASFETGI----QNVKAHSIKLNVPVHYGEFGVGRSSNTAERNTDLVRNYYRTMARTTLAQSMSYSVWDDRGWFALI----NPTGTSFVNNIVPYML 375          
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Match: A0A4Q3UEW8_9BACT (Glycoside hydrolase family 5 protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A4Q3UEW8_9BACT)

HSP 1 Score: 219 bits (557), Expect = 2.690e-64
Identity = 132/342 (38.60%), Postives = 188/342 (54.97%), Query Frame = 1
Query:   28 AAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDV--------PEFVDKVESAVDHAIGLGLVVIVNAHHEQWLT-RYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSV---SRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVPVPVHIGEFGVGRV-NRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALL 1014
            AAQ+   M +G NLGNT D   HST PA +   +D   A G  HVRIPV+W          D         P F  ++ + VD+A+  GL VIVNAHHE WL   YDGS      F  +W  IA +F+++ Q KLVFE+LNEP    G   G       P+AL+ TRK+N  G+  +R     +R R+V++  N  G+     +++PT  +LPGGG+D YL VT+H+Y PW F G +GS++ +      EA IA+    +    + + VPV+ GEFGVGR  ++  RD+D+VR YYR     A+  G+    WDD G F +T  + D    +F++ I  +++
Sbjct:   28 AAQVNRQMATGFNLGNTFDLGLHSTAPADVKPLIDLYVAAGMRHVRIPVTWGEPIKGSLLADRTGKLNPNNPRF-RQLGTVVDYALSKGLYVIVNAHHEHWLKDHYDGSPTYDRAFADLWTGIAQQFKNRSQ-KLVFEILNEPEKAFGDWSGPV-KPFDPQALSYTRKVNEIGWRAVRQAGGANRTRIVMVGTNGQGNQSMLDELYPTAAILPGGGKDPYLMVTVHTYDPWPFCGQDGSNAKWPG----EAAIAKPIRDVAAHARMLGVPVNYGEFGVGREKDQSERDTDLVRGYYRTVRRTAQAEGMSVTPWDDRGWFGLTTRSNDG-KYRFLHRIVPSMM 361          
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Match: A0A812JPA8_9DINO (CelCCD protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812JPA8_9DINO)

HSP 1 Score: 216 bits (550), Expect = 8.500e-63
Identity = 118/319 (36.99%), Postives = 186/319 (58.31%), Query Frame = 1
Query:   25 AAAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWR---PADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLTR-YDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALAL--TRKLNAAGYTGIRSVS--RRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVPVPVHIGEFGVGRVN--RWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAI 951
            + +  +  M  G+N+GN  D    + DPAV+ +++     EG+ H+R+PV+W     AD         E   +V   VD+A+GLGL V++N HHE WL   YDGS+   D+F ++W  IA  F  K  ++L FEVLNEP    G    + G+    + +A+  TR++N  GY+ IRSV+  + R++ + PN M S+  A  ++P+   LPG G D  + VT+H+Y P+ F G NG  S +AS  +++ D++ +F+ +  W     +PV++GE+GVGR    +W RD+++VR YY+  +   R++G+  AAWDD G F I
Sbjct:   80 SCSSTVQNMSRGINIGNVYDYDQGNRDPAVVKQQVKWAYDEGFRHIRLPVTWDGYFDAD--------SELTKQVTEVVDYALGLGLHVVINTHHEHWLKDGYDGSQHYKDQFWNLWTGIAGHFAYK-SSRLSFEVLNEPDKAFGS---WNGNPDPFDQIAIDRTREINGLGYSAIRSVAGNQDRMIFLHPNAMSSIGTAKSIYPSKGSLPGEGNDACVGVTVHTYDPYDFCGENGQTSYYASSNAMKKDLSSQFKDIRDWAFDTFIPVYVGEYGVGRQTDRQWDRDNEIVREYYKFTANHFRESGMAVAAWDDPGWFGI 386          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CEX1_9STRA2.890e-285100.00Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A836CFT8_9STRA3.230e-10347.08Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A836CL48_9STRA9.910e-10347.06Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A836CFX5_9STRA2.450e-8540.00Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835Z601_9STRA6.830e-8340.00Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835ZM96_9STRA6.280e-8038.92Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A1K1MUA2_9FLAO3.720e-6539.31Endoglucanase n=1 Tax=Sinomicrobium oceani TaxID=1... [more]
A0A1N6EXW3_9FLAO1.890e-6437.21Aryl-phospho-beta-D-glucosidase BglC, GH1 family n... [more]
A0A4Q3UEW8_9BACT2.690e-6438.60Glycoside hydrolase family 5 protein n=1 Tax=bacte... [more]
A0A812JPA8_9DINO8.500e-6336.99CelCCD protein n=1 Tax=Symbiodinium sp. CCMP2592 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_3contigContig_3:934647..935849 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|157546|e_gw1.3.162.1
CAZyGH5,GH9
BRITEko00000,ko00001,ko01000
KEGG ReactionR06200,R11307,R11308
KEGG Pathwayko00500,ko01100,map00500,map01100
KEGG koko:K01179
EC3.2.1.4
DescriptionBelongs to the glycosyl hydrolase 5 (cellulase A) family
COG categoryG
Max annot lvl976|Bacteroidetes
EggNOG OGsCOG2730@1|root,COG2730@2|Bacteria,4NK8X@976|Bacteroidetes
Evalue9.85e-63
Seed ortholog1168289.AJKI01000036_gene3408
Hectar predicted targeting categoryother localisation
TranscriptId157868
TrackFilteredModels1
ProteinId157546
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157546gene_324Tribonema minus UTEX_B_3156 geneContig_3 934647..935849 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_324_1exon_324_1Tribonema minus UTEX_B_3156 exonContig_3 934647..935849 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_324CDS_324Tribonema minus UTEX_B_3156 CDSContig_3 934647..935849 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157546Trimin1|157546|e_gw1.3.162.1Tribonema minus UTEX_B_3156 polypeptideContig_3 934647..935849 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_324 ID=mRNA_324|Name=jgi.p|Trimin1|157546|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1203bp|location=Sequence derived from alignment at Contig_3:934647..935849- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTACCTGCGAGGGCCGATACTCGCCGCTGCGCAACTCCTGGCCACCAT
GAAGAGCGGATTGAACCTCGGTAATACTTTGGACACGGCCACGCACAGCA
CCGATCCGGCAGTGATGGCTCGCAGACTGGATGCCATCCGTGCCGAAGGG
TACGGCCATGTACGCATACCCGTGTCATGGCGCCCCGCGGATTTCGCCGT
CTGCCGCATCGACGTCCCGGAGTTCGTAGACAAGGTCGAGTCCGCCGTCG
ACCACGCCATCGGACTGGGACTGGTCGTCATCGTCAACGCCCACCACGAG
CAATGGCTCACCAGATATGACGGCTCGAAAGCGATGACCGACGAGTTCAC
CTCGATGTGGAGACGCATCGCGACTCGGTTCCGCGACAAGCCGCAGAACA
AGCTGGTGTTCGAAGTGCTCAACGAGCCGCACGGGACGATGGGCGGCGGA
GGGGGGTTCGGAGGCTCGTCGCAGTCACCGGAAGCACTGGCGCTCACCCG
CAAGTTGAACGCAGCCGGCTACACGGGCATCCGTTCTGTCAGTCGCCGTC
GCGTCGTCTTGATCCAACCCAACGACATGGGGAGTATGTACCAGGCTGGC
AAGATGTGGCCGACACCGGAAATGTTGCCGGGGGGCGGCAGGGATCAGTA
CCTGGCCGTGACGCTTCACTCGTACGCTCCGTGGGCGTTTGTGGGACCGA
ACGGGAGCGACTCAGCTTTCGCGTCACAGAAATCGTTGGAGGCTGACATC
GCGCAGCGCTTCGAGTCGCTGCTGCGGTGGATGCAAAGTGTACCTGTGCC
TGTGCACATCGGAGAGTTTGGAGTCGGCAGGGTGAACCGATGGCTGAGGG
ACTCTGACATGGTGCGCGCCTACTACCGCTGCTTCTCAGCTCGGGCACGG
GATGCTGGGATTCCGGCGGCGGCATGGGACGACGGCGGCGACTTTGCGAT
AACGAAGTTCAACCGCGACGCCACCAGCATCCAGTTCGTGTACGGGATAT
CCGAGGCGCTGCTCAGCAGTGCCTCCCCGGATCGCCAGCCGGAAGGGTGG
CGAGATCACCTGGTTGCTGCCGTTCGACAGGAAGCGGTCAACATCGACGG
AGACGCTGCCACGTCGCCGACCTCATCGACGCGCGACTTCGAGTCGTCGA
CGGGCAGCTTAGAGTCGTCGACGGGCGGCGTTCAGTCGTACACAGAAGCT
TGA
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protein sequence of jgi.p|Trimin1|157546

>Trimin1|157546|e_gw1.3.162.1 ID=Trimin1|157546|e_gw1.3.162.1|Name=jgi.p|Trimin1|157546|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=401bp
MYLRGPILAAAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEG
YGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHE
QWLTRYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGG
GGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAG
KMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADI
AQRFESLLRWMQSVPVPVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARAR
DAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALLSSASPDRQPEGW
RDHLVAAVRQEAVNIDGDAATSPTSSTRDFESSTGSLESSTGGVQSYTEA
*
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mRNA from alignment at Contig_3:934647..935849-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_324 ID=mRNA_324|Name=jgi.p|Trimin1|157546|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1203bp|location=Sequence derived from alignment at Contig_3:934647..935849- (Tribonema minus UTEX_B_3156 )
ATGTACCTGCGAGGGCCGATACTCGCCGCTGCGCAACTCCTGGCCACCAT GAAGAGCGGATTGAACCTCGGTAATACTTTGGACACGGCCACGCACAGCA CCGATCCGGCAGTGATGGCTCGCAGACTGGATGCCATCCGTGCCGAAGGG TACGGCCATGTACGCATACCCGTGTCATGGCGCCCCGCGGATTTCGCCGT CTGCCGCATCGACGTCCCGGAGTTCGTAGACAAGGTCGAGTCCGCCGTCG ACCACGCCATCGGACTGGGACTGGTCGTCATCGTCAACGCCCACCACGAG CAATGGCTCACCAGATATGACGGCTCGAAAGCGATGACCGACGAGTTCAC CTCGATGTGGAGACGCATCGCGACTCGGTTCCGCGACAAGCCGCAGAACA AGCTGGTGTTCGAAGTGCTCAACGAGCCGCACGGGACGATGGGCGGCGGA GGGGGGTTCGGAGGCTCGTCGCAGTCACCGGAAGCACTGGCGCTCACCCG CAAGTTGAACGCAGCCGGCTACACGGGCATCCGTTCTGTCAGTCGCCGTC GCGTCGTCTTGATCCAACCCAACGACATGGGGAGTATGTACCAGGCTGGC AAGATGTGGCCGACACCGGAAATGTTGCCGGGGGGCGGCAGGGATCAGTA CCTGGCCGTGACGCTTCACTCGTACGCTCCGTGGGCGTTTGTGGGACCGA ACGGGAGCGACTCAGCTTTCGCGTCACAGAAATCGTTGGAGGCTGACATC GCGCAGCGCTTCGAGTCGCTGCTGCGGTGGATGCAAAGTGTACCTGTGCC TGTGCACATCGGAGAGTTTGGAGTCGGCAGGGTGAACCGATGGCTGAGGG ACTCTGACATGGTGCGCGCCTACTACCGCTGCTTCTCAGCTCGGGCACGG GATGCTGGGATTCCGGCGGCGGCATGGGACGACGGCGGCGACTTTGCGAT AACGAAGTTCAACCGCGACGCCACCAGCATCCAGTTCGTGTACGGGATAT CCGAGGCGCTGCTCAGCAGTGCCTCCCCGGATCGCCAGCCGGAAGGGTGG CGAGATCACCTGGTTGCTGCCGTTCGACAGGAAGCGGTCAACATCGACGG AGACGCTGCCACGTCGCCGACCTCATCGACGCGCGACTTCGAGTCGTCGA CGGGCAGCTTAGAGTCGTCGACGGGCGGCGTTCAGTCGTACACAGAAGCT TGA
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Coding sequence (CDS) from alignment at Contig_3:934647..935849-

>mRNA_324 ID=mRNA_324|Name=jgi.p|Trimin1|157546|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1203bp|location=Sequence derived from alignment at Contig_3:934647..935849- (Tribonema minus UTEX_B_3156 )
ATGTACCTGCGAGGGCCGATACTCGCCGCTGCGCAACTCCTGGCCACCAT
GAAGAGCGGATTGAACCTCGGTAATACTTTGGACACGGCCACGCACAGCA
CCGATCCGGCAGTGATGGCTCGCAGACTGGATGCCATCCGTGCCGAAGGG
TACGGCCATGTACGCATACCCGTGTCATGGCGCCCCGCGGATTTCGCCGT
CTGCCGCATCGACGTCCCGGAGTTCGTAGACAAGGTCGAGTCCGCCGTCG
ACCACGCCATCGGACTGGGACTGGTCGTCATCGTCAACGCCCACCACGAG
CAATGGCTCACCAGATATGACGGCTCGAAAGCGATGACCGACGAGTTCAC
CTCGATGTGGAGACGCATCGCGACTCGGTTCCGCGACAAGCCGCAGAACA
AGCTGGTGTTCGAAGTGCTCAACGAGCCGCACGGGACGATGGGCGGCGGA
GGGGGGTTCGGAGGCTCGTCGCAGTCACCGGAAGCACTGGCGCTCACCCG
CAAGTTGAACGCAGCCGGCTACACGGGCATCCGTTCTGTCAGTCGCCGTC
GCGTCGTCTTGATCCAACCCAACGACATGGGGAGTATGTACCAGGCTGGC
AAGATGTGGCCGACACCGGAAATGTTGCCGGGGGGCGGCAGGGATCAGTA
CCTGGCCGTGACGCTTCACTCGTACGCTCCGTGGGCGTTTGTGGGACCGA
ACGGGAGCGACTCAGCTTTCGCGTCACAGAAATCGTTGGAGGCTGACATC
GCGCAGCGCTTCGAGTCGCTGCTGCGGTGGATGCAAAGTGTACCTGTGCC
TGTGCACATCGGAGAGTTTGGAGTCGGCAGGGTGAACCGATGGCTGAGGG
ACTCTGACATGGTGCGCGCCTACTACCGCTGCTTCTCAGCTCGGGCACGG
GATGCTGGGATTCCGGCGGCGGCATGGGACGACGGCGGCGACTTTGCGAT
AACGAAGTTCAACCGCGACGCCACCAGCATCCAGTTCGTGTACGGGATAT
CCGAGGCGCTGCTCAGCAGTGCCTCCCCGGATCGCCAGCCGGAAGGGTGG
CGAGATCACCTGGTTGCTGCCGTTCGACAGGAAGCGGTCAACATCGACGG
AGACGCTGCCACGTCGCCGACCTCATCGACGCGCGACTTCGAGTCGTCGA
CGGGCAGCTTAGAGTCGTCGACGGGCGGCGTTCAGTCGTACACAGAAGCT
TGA
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