mRNA_324 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Match: A0A836CEX1_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEX1_9STRA) HSP 1 Score: 781 bits (2018), Expect = 2.890e-285 Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 1 Query: 1 MYLRGPILAAAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLTRYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVPVPVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALLSSASPDRQPEGWRDHLVAAVRQEAVNIDGDAATSPTSSTRDFESXXXXXXXXXXXXXSYTEA 1200 MYLRGPILAAAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLTRYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVPVPVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALLSSASPDRQPEGWRDHLVAAVRQEAVNIDGDAATSPTSSTRDFESXXXXXXXXXXXXXSYTEA Sbjct: 1 MYLRGPILAAAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLTRYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVPVPVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALLSSASPDRQPEGWRDHLVAAVRQEAVNIDGDAATSPTSSTRDFESXXXXXXXXXXXXXSYTEA 400
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Match: A0A836CFT8_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT8_9STRA) HSP 1 Score: 318 bits (814), Expect = 3.230e-103 Identity = 161/342 (47.08%), Postives = 220/342 (64.33%), Query Frame = 1 Query: 28 AAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLTRYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVPV-----PVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDG--GDFAITKFNRDATSIQFVYGIS-EALLSSASP 1029 AA+L ATM +G+NLGNTLD A ++ D V+ARRL A+R +G+ HVRIPV+W+P + CR++ P FV VE AV+ AI LG VI+NAHHE WLT YDGS M F +WR++A F+ PQ+KL+FE+LNEP GTM +P A LTR LNA GY +R++S R+VLIQPN++G + A + TP +LPG G+D+YLA+T+HSY P F P GS++ F EA + Q + L+ + + + PVH+GEFGVGR N RD+ +V YYR + ARDA IP WDDG DF IT F+R+A + F + ++ + L ++A+P Sbjct: 5 AAELFATMGTGINLGNTLDNAQNNRDTEVIARRLTALRQKGFQHVRIPVTWQPMGCSKCRVNSPSFVALVEGAVNAAIALGFTVILNAHHEAWLTSYDGSSGMNAAFADLWRKVALHFKSVPQDKLLFELLNEPQGTM--------CPCTPAAQQLTRTLNATGYNAVRAISPTRIVLIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAITVHSYGPPKFALPKGSNAYFLDMADPEAAVCQHVKKLIAELLKLRLALGSTPVHLGEFGVGRENLADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRNANCVDFTFDLAGDVLGTTATP 338
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Match: A0A836CL48_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL48_9STRA) HSP 1 Score: 317 bits (812), Expect = 9.910e-103 Identity = 160/340 (47.06%), Postives = 221/340 (65.00%), Query Frame = 1 Query: 28 AAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLTRYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVPV-----PVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDG--GDFAITKFNRDATSIQFVYGISEALLSSAS 1026 AA+L AT+ +G+NLGNTLDTA HS D +V+ RRL A+R +G+ HVRIPV+W+P + R++ P FV VE AV AI LG VI+NAHHE WLT YD S AM F +WR+I+ F+ PQ+KL+FE+LNEP GTM +P A LTR LNA GY +R+VS R++LIQPN++G + A + TP +LPG G+D+YLAV++HSY P F P+GS++ F + EA + + ++L+ + + + PVH+GEFG+GR N RD+ +V YYR + ARDA IP WDDG DF IT F+RDAT + F + ++ +L +A+ Sbjct: 5 AAELFATLGTGINLGNTLDTAQHSRDTSVITRRLTALREKGFRHVRIPVTWQPMGCSTNRVNSPSFVAMVEGAVAAAIELGFTVILNAHHEAWLTAYDASPAMNAAFADLWRKISLHFKSVPQDKLLFELLNEPQGTM--------CPCTPAAQQLTRTLNATGYNAVRAVSPTRIILIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAVSVHSYGPPQFALPSGSNAYFLNMADPEAAVCKHVKTLIAELLKLRLALGSTPVHLGEFGIGRENFADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRDATFVNFTFDLAGEVLGTAT 336
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Match: A0A836CFX5_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFX5_9STRA) HSP 1 Score: 272 bits (695), Expect = 2.450e-85 Identity = 134/335 (40.00%), Postives = 208/335 (62.09%), Query Frame = 1 Query: 28 AAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLTR-YDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSV---PVPVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALLSS 1020 A Q+L ++ +G+NLG ++ HS D + L A++++G+GHVRIPV+W P VC +D PEF+ ++ A D A+ LGL VI+NAHHE WL + YDGS A +F +WRRIA ++ Q +++FEVLNEP G G ++ + + LTRK+N AGY GIR+VS RVVL+QPN+ G+++ ++P LPG G D+YL + H+Y + F G + + S + AD+A+R +++W ++ V +H+GEFGVGR+++ RD+D+VRAYY+ S R+ I AW DGG FA+T + T + + +G+++ +L + Sbjct: 5 ATQVLTSIGTGINLGQVFESKQHSRDADKIRPWLSAVKSKGFGHVRIPVTWYPGTAHVCMLDDPEFMHLLDDATDFAVKLGLTVIINAHHEDWLFQHYDGSAAYNTKFKELWRRIAAKYNAYTQQQVIFEVLNEPTAKFG----LGSAAATSACIDLTRKINCAGYAGIRAVSATRVVLVQPNNAGNIWSVPIVYPDKASLPGAGADKYLGIQFHTYDNYNFCLQGGRNDHYKSVADVSADVAKRLTMIVKWHGAIGKDTVAIHLGEFGVGRLDQRQRDADIVRAYYKLTSKLFREKRICVTAWSDGGWFALTLTDARQT-VTWPFGLADQVLKT 334
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Match: A0A835Z601_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z601_9STRA) HSP 1 Score: 266 bits (679), Expect = 6.830e-83 Identity = 134/335 (40.00%), Postives = 208/335 (62.09%), Query Frame = 1 Query: 25 AAAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLTR-YDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVP----VPVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALL 1014 +A+Q+L + G+NLG T ++ +S PA + L IR +G+GHVRIPV+W P + C+++ F+ +++++++A+ +GL VI+N HHE W+ YDGS +F +W +IATR++ PQNKL+FEVLNEP G G S+ S E +ALTR +N G IR+V R+VL+QPN MG+++ K++P+ + LPG G D+YL V H+Y + F GS+ + S L ADI +R E + +W ++ V +H+GEFGVGR+++ RD+D+V+AYYR S R GI AW DGG F + + T +QF +G+++ ++ Sbjct: 5 SASQVLGDIGIGVNLGQTFESKMNSRQPAQVRPWLLGIRQKGFGHVRIPVTWYPGNSHACQLNDALFMQCLDNSIEYAVKIGLAVILNTHHEDWIIDGYDGSDLYNVKFKKLWTQIATRYKRYPQNKLIFEVLNEPSGKFGKPDE---SADSSECIALTRLINLVGLEAIRAVDSTRIVLVQPNAMGNVWSVPKVYPSKDTLPGSGADKYLGVQFHTYDHYKFCLQAGSNEYYKSLNELRADIQKRVEMIKKWHVTIGGNDVVALHLGEFGVGRLDQRQRDADIVKAYYRLTSLLYRQKGICVTAWSDGGWFNVASLDSRGT-VQFPFGLADMVI 335
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Match: A0A835ZM96_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZM96_9STRA) HSP 1 Score: 258 bits (659), Expect = 6.280e-80 Identity = 130/334 (38.92%), Postives = 204/334 (61.08%), Query Frame = 1 Query: 28 AAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWL-TRYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSV----PVPVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALL 1014 A Q+L+ + GLNLG ++ +S P + L A++A+G+GHVRIPV+W P+D C +D EFV ++ A+ +A+ +GL +++NAHHE+WL YDGS +F ++W RIA ++R Q +L+FEVLNEP G G G +S + + LTR +N GY GIR V R+VL+QPND G+++ +++PT LPG G D+ + + H+Y + F G+++ + S + ADI +R L++W + V +H+GEFGVGR+++ RD+D+VRAYYR S RD I AW D G FA+T + + + + +G+++ +L Sbjct: 5 ATQILSEIGIGLNLGQVFESKQNSRRPDQVRPWLAAVKAKGFGHVRIPVTWYPSD--ACVLDDSEFVHLLDDAIQYAVKIGLTLVINAHHEKWLFDYYDGSDVFNAKFKALWSRIAYKYRAYTQQQLLFEVLNEPDGKFG----IGSASTTTGCIELTRTINRVGYEGIRYVDATRIVLVQPNDAGNIWAVPRVYPTKATLPGAGADKSVGIQCHTYDHYNFCLQGGTNAFYKSVDDISADIGKRVAMLMKWHTDIGGQDTVALHLGEFGVGRLDQRQRDADIVRAYYRITSKLFRDKSICCTAWSDNGWFALTTMDA-SRRVTWPFGLADQIL 331
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Match: A0A1K1MUA2_9FLAO (Endoglucanase n=1 Tax=Sinomicrobium oceani TaxID=1150368 RepID=A0A1K1MUA2_9FLAO) HSP 1 Score: 221 bits (564), Expect = 3.720e-65 Identity = 136/346 (39.31%), Postives = 189/346 (54.62%), Query Frame = 1 Query: 28 AAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRP------ADFAVCRIDV--PEFVDKVESAVDHAIGLGLVVIVNAHHEQWLT-RYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGG--SSQSPEALALTRKLNAAGYTGIRSV---SRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVPVPVHIGEFGVGRV-NRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALLSS 1020 A +++ MK+G NLGNT D ++T + + +D + G H+RIPV+W AD + IDV P F+D V+ VD+A+ + VI+N HHE WL YDGS D+F ++W IAT FRD P N LVFEVLNEP GT+G G G P AL TRK+N GY IR+ + R+V++ N G+ +++P LPG G D YLA+ +HSY+PW+F G GS+SAF E+ + + + + + VPVH GEFGVGR N R++D+VR YY+ + + WDD G F + N T QF YGI +L + Sbjct: 45 AGEIILDMKAGFNLGNTFDNGINTTTFSGIQPIVDLYKNAGMKHIRIPVTWMDRFESHLAD-SEGHIDVNHPRFLDLVQ-VVDYAVEQDMYVILNTHHEHWLKDHYDGSAGFNDKFHTLWTEIATYFRDYPVN-LVFEVLNEPEGTLGENDGSGPFPDPTDPTALEYTRKVNKVGYDAIRATGGNNATRLVMVGTNGQGNALYIDEVYPNKASLPGEGTDPYLAIQVHSYSPWSFCGETGSNSAFPGNSFFESGV----QDVSVHSKLLNVPVHYGEFGVGRSSNTAERNTDLVRGYYKTMADATLGQSMSYCVWDDRGWFGLV--NNSGT--QFTYGIVPFMLGN 379
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Match: A0A1N6EXW3_9FLAO (Aryl-phospho-beta-D-glucosidase BglC, GH1 family n=4 Tax=Chryseobacterium group TaxID=2782232 RepID=A0A1N6EXW3_9FLAO) HSP 1 Score: 219 bits (559), Expect = 1.890e-64 Identity = 128/344 (37.21%), Postives = 188/344 (54.65%), Query Frame = 1 Query: 25 AAAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVC-------RIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLT-RYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALAL--TRKLNAAGYTGIRSV---SRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVPVPVHIGEFGVGRV-NRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALL 1014 +A +++A M G NLGNT D H T A + +D + G HVRIP +W + ++ P F++ +++ +D+A+ L VI+N HHE WL YDGS+ +F ++W IAT F+D PQ KL+FEVLNEP G +G G G +ALAL TRK+N GY IR+ + +R++++ N G+ ++P+ LPGGG D YL++ +H+Y+PWAF G GS++AF S E I +++ + VPVH GEFGVGR N R++D+VR YYR + + + WDD G FA+ + T FV I +L Sbjct: 42 SAKKIIADMGPGFNLGNTFDNGIHPTSLAAIKPVIDLYKNAGMKHVRIPTTWMDRFSSTLADNNGNINVNHPRFIE-LKAVIDYALSKDLYVILNTHHESWLKDHYDGSEQYDTKFRTLWTGIATYFKDYPQ-KLIFEVLNEPEGNLGELDGNGPFPDPTDALALQYTRKVNQVGYDAIRATHGNNEKRLIMVGTNGQGNALYISNVYPSKSSLPGGGNDDYLSIQVHTYSPWAFCGETGSNAAFPGTASFETGI----QNVKAHSIKLNVPVHYGEFGVGRSSNTAERNTDLVRNYYRTMARTTLAQSMSYSVWDDRGWFALI----NPTGTSFVNNIVPYML 375
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Match: A0A4Q3UEW8_9BACT (Glycoside hydrolase family 5 protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A4Q3UEW8_9BACT) HSP 1 Score: 219 bits (557), Expect = 2.690e-64 Identity = 132/342 (38.60%), Postives = 188/342 (54.97%), Query Frame = 1 Query: 28 AAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDV--------PEFVDKVESAVDHAIGLGLVVIVNAHHEQWLT-RYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSV---SRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVPVPVHIGEFGVGRV-NRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAITKFNRDATSIQFVYGISEALL 1014 AAQ+ M +G NLGNT D HST PA + +D A G HVRIPV+W D P F ++ + VD+A+ GL VIVNAHHE WL YDGS F +W IA +F+++ Q KLVFE+LNEP G G P+AL+ TRK+N G+ +R +R R+V++ N G+ +++PT +LPGGG+D YL VT+H+Y PW F G +GS++ + EA IA+ + + + VPV+ GEFGVGR ++ RD+D+VR YYR A+ G+ WDD G F +T + D +F++ I +++ Sbjct: 28 AAQVNRQMATGFNLGNTFDLGLHSTAPADVKPLIDLYVAAGMRHVRIPVTWGEPIKGSLLADRTGKLNPNNPRF-RQLGTVVDYALSKGLYVIVNAHHEHWLKDHYDGSPTYDRAFADLWTGIAQQFKNRSQ-KLVFEILNEPEKAFGDWSGPV-KPFDPQALSYTRKVNEIGWRAVRQAGGANRTRIVMVGTNGQGNQSMLDELYPTAAILPGGGKDPYLMVTVHTYDPWPFCGQDGSNAKWPG----EAAIAKPIRDVAAHARMLGVPVNYGEFGVGREKDQSERDTDLVRGYYRTVRRTAQAEGMSVTPWDDRGWFGLTTRSNDG-KYRFLHRIVPSMM 361
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Match: A0A812JPA8_9DINO (CelCCD protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812JPA8_9DINO) HSP 1 Score: 216 bits (550), Expect = 8.500e-63 Identity = 118/319 (36.99%), Postives = 186/319 (58.31%), Query Frame = 1 Query: 25 AAAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWR---PADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLTR-YDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALAL--TRKLNAAGYTGIRSVS--RRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVPVPVHIGEFGVGRVN--RWLRDSDMVRAYYRCFSARARDAGIPAAAWDDGGDFAI 951 + + + M G+N+GN D + DPAV+ +++ EG+ H+R+PV+W AD E +V VD+A+GLGL V++N HHE WL YDGS+ D+F ++W IA F K ++L FEVLNEP G + G+ + +A+ TR++N GY+ IRSV+ + R++ + PN M S+ A ++P+ LPG G D + VT+H+Y P+ F G NG S +AS +++ D++ +F+ + W +PV++GE+GVGR +W RD+++VR YY+ + R++G+ AAWDD G F I Sbjct: 80 SCSSTVQNMSRGINIGNVYDYDQGNRDPAVVKQQVKWAYDEGFRHIRLPVTWDGYFDAD--------SELTKQVTEVVDYALGLGLHVVINTHHEHWLKDGYDGSQHYKDQFWNLWTGIAGHFAYK-SSRLSFEVLNEPDKAFGS---WNGNPDPFDQIAIDRTREINGLGYSAIRSVAGNQDRMIFLHPNAMSSIGTAKSIYPSKGSLPGEGNDACVGVTVHTYDPYDFCGENGQTSYYASSNAMKKDLSSQFKDIRDWAFDTFIPVYVGEYGVGRQTDRQWDRDNEIVREYYKFTANHFRESGMAVAAWDDPGWFGI 386 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157546 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_324 ID=mRNA_324|Name=jgi.p|Trimin1|157546|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1203bp|location=Sequence derived from alignment at Contig_3:934647..935849- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTACCTGCGAGGGCCGATACTCGCCGCTGCGCAACTCCTGGCCACCATback to top protein sequence of jgi.p|Trimin1|157546 >Trimin1|157546|e_gw1.3.162.1 ID=Trimin1|157546|e_gw1.3.162.1|Name=jgi.p|Trimin1|157546|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=401bp MYLRGPILAAAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGback to top mRNA from alignment at Contig_3:934647..935849- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_324 ID=mRNA_324|Name=jgi.p|Trimin1|157546|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1203bp|location=Sequence derived from alignment at Contig_3:934647..935849- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_3:934647..935849- >mRNA_324 ID=mRNA_324|Name=jgi.p|Trimin1|157546|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1203bp|location=Sequence derived from alignment at Contig_3:934647..935849- (Tribonema minus UTEX_B_3156 )back to top |