mRNA_3185 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|347643
Unique Name	mRNA_3185
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

[Close]

BLAST of jgi.p|Trimin1|347643 vs. uniprot
Match: A0A836CK79_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK79_9STRA)

HSP 1 Score: 1102 bits (2850), Expect = 0.000e+0
Identity = 618/618 (100.00%), Postives = 618/618 (100.00%), Query Frame = 1

Query:    1 MLAFAAARDSSSSKRHLKLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQNWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQHARDALDAIINGATPGLQAHNGSYSSGLSVSGTFPTTTTLNPAAANHAWTLRHPTNAAVIVLQQLLGGGVPLHEAALLSNMTPTTVPGDYIMCPKDADFALFAQPYADFLREQYAHGVRAFVCIGTRNEAAVLDALCPRGHTAVCLAEHNNSRLLLVLGVGENGSDGRQFLLLVPHEHMSHVMWQALSRSSRLWLLAGLVHCVSALQALRGKARPDAKGLLELVGPEKAEGKRSGWYSSGAYAESVMRGARRLQFIRAFGEEEGLAKWQAWYTDCKRRAGKKSHEAWEAGEYTNIVKEDPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXEANWVQGVNVPDTCLQRVRAIVRDVAASSKALTGLTLSEDGDEDGAYTLYTAPNKPANAAAYNDVLRAVTAVTGLGADAFKTHLGSKRGRESRVCKADDNVKDFARQMQLDGVALWKMKPEAVKDLAIDEKGTSVTGTAGLTKGKALAVVMDRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA 1854
            MLAFAAARDSSSSKRHLKLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQNWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQHARDALDAIINGATPGLQAHNGSYSSGLSVSGTFPTTTTLNPAAANHAWTLRHPTNAAVIVLQQLLGGGVPLHEAALLSNMTPTTVPGDYIMCPKDADFALFAQPYADFLREQYAHGVRAFVCIGTRNEAAVLDALCPRGHTAVCLAEHNNSRLLLVLGVGENGSDGRQFLLLVPHEHMSHVMWQALSRSSRLWLLAGLVHCVSALQALRGKARPDAKGLLELVGPEKAEGKRSGWYSSGAYAESVMRGARRLQFIRAFGEEEGLAKWQAWYTDCKRRAGKKSHEAWEAGEYTNIVKEDPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXEANWVQGVNVPDTCLQRVRAIVRDVAASSKALTGLTLSEDGDEDGAYTLYTAPNKPANAAAYNDVLRAVTAVTGLGADAFKTHLGSKRGRESRVCKADDNVKDFARQMQLDGVALWKMKPEAVKDLAIDEKGTSVTGTAGLTKGKALAVVMDRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA
Sbjct:    1 MLAFAAARDSSSSKRHLKLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQNWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQHARDALDAIINGATPGLQAHNGSYSSGLSVSGTFPTTTTLNPAAANHAWTLRHPTNAAVIVLQQLLGGGVPLHEAALLSNMTPTTVPGDYIMCPKDADFALFAQPYADFLREQYAHGVRAFVCIGTRNEAAVLDALCPRGHTAVCLAEHNNSRLLLVLGVGENGSDGRQFLLLVPHEHMSHVMWQALSRSSRLWLLAGLVHCVSALQALRGKARPDAKGLLELVGPEKAEGKRSGWYSSGAYAESVMRGARRLQFIRAFGEEEGLAKWQAWYTDCKRRAGKKSHEAWEAGEYTNIVKEDPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXEANWVQGVNVPDTCLQRVRAIVRDVAASSKALTGLTLSEDGDEDGAYTLYTAPNKPANAAAYNDVLRAVTAVTGLGADAFKTHLGSKRGRESRVCKADDNVKDFARQMQLDGVALWKMKPEAVKDLAIDEKGTSVTGTAGLTKGKALAVVMDRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA 618

[Close]

BLAST of jgi.p|Trimin1|347643 vs. uniprot
Match: A0A835Z1A9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1A9_9STRA)

HSP 1 Score: 160 bits (406), Expect = 1.070e-43
Identity = 81/89 (91.01%), Postives = 84/89 (94.38%), Query Frame = 1

Query: 1588 VKDFARQMQLDGVALWKMKPEAVKDLAIDEKGTSVTGTAGLTKGKALAVVMDRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA 1854
             KD A++M LDGVALWKM+PEAVKDLAIDEKGTSVTG AGLTKGKALAVVM RYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA
Sbjct:    7 AKDVAQEMLLDGVALWKMEPEAVKDLAIDEKGTSVTGAAGLTKGKALAVVMHRYNTGQQIYQTVLPSIHPAGYRPVTLKAVQRPPPSSA 95

[Close]

BLAST of jgi.p|Trimin1|347643 vs. uniprot
Match: A0A835YTA4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTA4_9STRA)

HSP 1 Score: 142 bits (359), Expect = 3.820e-35
Identity = 103/106 (97.17%), Postives = 105/106 (99.06%), Query Frame = 1

Query:    1 MLAFAAARDSSSSKRHLKLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQNWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQHARDAL 318
            MLAFAAARDSSSSKRH+KLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQ+WEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQ ARDAL
Sbjct:    1 MLAFAAARDSSSSKRHIKLSTRLQQSLIADPTTPAPRPXXXXXXXXXXXXXXXXXXXXXXXLIQSWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQRARDAL 106

[Close]

BLAST of jgi.p|Trimin1|347643 vs. uniprot
Match: A0A836CKF5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKF5_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.320e-10
Identity = 47/96 (48.96%), Postives = 58/96 (60.42%), Query Frame = 1

Query: 1291 ANWVQGVNVPDTCLQRVRAIVRDVAASSKALTGLTLSEDGDEDGAYTLYTAPNKPANAAAYNDVLRAVTAVTGLGADAFKTHLGSKRG--RESRVC 1572
            ANWV+G +VP   L+RVR IV+ +AA  +AL GLTL+    E G Y L TA N+ A    Y  VL A       G+ AFKTHLGS+RG  + SR C
Sbjct:  558 ANWVEGADVPAQHLERVRTIVKAIAALDEALRGLTLTAVPGETGVYHLSTATNQRATPEVYIAVLAAA------GSSAFKTHLGSRRGGYKSSRDC 647

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|347643 vs. uniprot

BLAST of jgi.p|Trimin1|347643 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A836CK79_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835Z1A9_9STRA	1.070e-43	91.01	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YTA4_9STRA	3.820e-35	97.17	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CKF5_9STRA	1.320e-10	48.96	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_14	contig	Contig_14:630337..637319 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|347643\|estExt_Genemark1.C_Ctg_140066
Hectar predicted targeting category	mitochondrion
TranscriptId	347965
Track	FilteredModels1
ProteinId	347643

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347643	gene_3185	Tribonema minus UTEX_B_3156	gene	Contig_14 630337..637319 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|347643	Trimin1\|347643\|estExt_Genemark1.C_Ctg_140066	Tribonema minus UTEX_B_3156	polypeptide	Contig_14 630337..637319 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_3185_8	exon_3185_8	Tribonema minus UTEX_B_3156	exon	Contig_14 630337..630534 -
exon_3185_7	exon_3185_7	Tribonema minus UTEX_B_3156	exon	Contig_14 631101..631207 -
exon_3185_6	exon_3185_6	Tribonema minus UTEX_B_3156	exon	Contig_14 632332..632601 -
exon_3185_5	exon_3185_5	Tribonema minus UTEX_B_3156	exon	Contig_14 633435..633506 -
exon_3185_4	exon_3185_4	Tribonema minus UTEX_B_3156	exon	Contig_14 634545..634616 -
exon_3185_3	exon_3185_3	Tribonema minus UTEX_B_3156	exon	Contig_14 635738..636530 -
exon_3185_2	exon_3185_2	Tribonema minus UTEX_B_3156	exon	Contig_14 636631..636789 -
exon_3185_1	exon_3185_1	Tribonema minus UTEX_B_3156	exon	Contig_14 637134..637319 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_3185	CDS_3185	Tribonema minus UTEX_B_3156	CDS	Contig_14 637134..637319 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_14:630337..637319-
coding sequence from alignment at Contig_14:630337..637319-

spliced messenger RNA

>mRNA_3185 ID=mRNA_3185|Name=jgi.p|Trimin1|347643|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1857bp|location=Sequence derived from alignment at Contig_14:630337..637319- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTTGCCTTCGCCGCAGCCCGCGACAGCAGCAGCAGCAAGCGGCACCT
TAAGCTTTCGACCAGGCTGCAGCAATCCCTTATCGCCGACCCGACCACGC
CAGCGCCCCGTCCGCCGCGGGCGAAGAAGGCCAGAGTGGCGGCGTCGAGT
TCTGCGGCTGCAGATGCTGGGGAGCTGGGAGAGCTGATACAGAACTGGGA
GCCTGATGCAGAGGCTTCACTGCGACACATCGAAGCCAGTGGCGCCGTCT
CCGCAGAACAGCGCCGAGCGCAGATCATCAGCCAGATCTCATGCGACCAG
CACGCCCGAGACGCCCTCGACGCCATCATCAACGGCGCCACCCCTGGCCT
ACAGGCTCACAATGGCAGCTACAGCAGCGGCCTCAGCGTCAGCGGCACCT
TCCCGACTACTACAACATTGAACCCTGCAGCAGCGAACCACGCCTGGACT
CTGCGGCATCCCACCAATGCGGCGGTGATCGTGCTGCAGCAGCTGCTGGG
CGGAGGCGTGCCGCTGCACGAGGCCGCGCTCCTAAGCAACATGACGCCCA
CCACAGTCCCTGGCGATTACATCATGTGCCCCAAGGACGCTGACTTCGCC
CTCTTCGCACAGCCTTACGCGGACTTTCTGCGAGAGCAGTACGCCCATGG
CGTGCGCGCCTTCGTTTGCATCGGCACCCGCAACGAGGCGGCGGTCCTGG
ACGCGCTTTGCCCTCGTGGCCACACCGCCGTCTGCCTTGCTGAGCACAAC
AATAGCCGGCTGCTGCTGGTGCTGGGCGTAGGCGAGAACGGCTCAGACGG
GAGGCAGTTCCTGCTGCTGGTGCCGCATGAACACATGTCGCACGTGATGT
GGCAGGCGCTGAGCCGGTCCAGCAGACTGTGGCTGCTGGCGGGCCTGGTT
CACTGCGTCAGTGCGCTCCAAGCGCTGCGGGGGAAAGCTCGGCCGGACGC
GAAGGGGTTACTGGAGCTCGTGGGGCCGGAGAAAGCGGAGGGGAAGCGCT
CTGGATGGTACAGCAGCGGAGCGTACGCGGAGAGCGTAATGCGAGGTGCA
CGCCGGCTTCAGTTCATTCGCGCCTTCGGTGAGGAGGAGGGTCTTGCTAA
GTGGCAGGCGTGGTACACGGACTGCAAGCGGCGGGCAGGCAAGAAGTCAC
ATGAAGCGTGGGAGGCGGGCGAGTACACCAACATCGTGAAGGAAGACCCA
AGCGCTGCAGGCAAGAAGTCACATGAAGCGTGGGAGGCGGGCGAGTACAC
CAACATCGTGAAGGAAGACCCAAGCGCTGCAGGGAAGGAAGCGAATTGGG
TGCAAGGCGTCAACGTGCCCGACACATGCCTGCAGCGCGTGCGCGCCATC
GTCCGCGACGTCGCCGCCAGCAGCAAGGCTTTGACGGGGCTCACGCTCAG
CGAAGACGGCGACGAGGACGGCGCTTACACCCTGTACACGGCGCCCAACA
AGCCCGCCAACGCCGCGGCCTACAATGACGTGCTTCGCGCTGTGACCGCT
GTGACGGGGCTGGGCGCTGACGCTTTCAAGACGCACCTGGGCAGCAAGCG
CGGTCGCGAGAGCAGAGTATGCAAGGCTGATGACAACGTGAAGGACTTCG
CGCGGCAGATGCAGTTGGATGGGGTGGCCCTCTGGAAGATGAAGCCTGAA
GCTGTGAAAGACTTGGCCATAGATGAGAAGGGCACTTCGGTGACAGGTAC
GGCTGGCCTGACCAAGGGCAAGGCGCTGGCGGTGGTCATGGATAGATACA
ATACGGGTCAGCAGATCTACCAGACAGTGCTGCCCAGCATTCACCCTGCC
GGCTACAGGCCTGTGACACTCAAAGCTGTTCAGAGGCCGCCTCCGTCCTC
CGCTTGA

protein sequence of jgi.p|Trimin1|347643

>Trimin1|347643|estExt_Genemark1.C_Ctg_140066 ID=Trimin1|347643|estExt_Genemark1.C_Ctg_140066|Name=jgi.p|Trimin1|347643|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=619bp
MLAFAAARDSSSSKRHLKLSTRLQQSLIADPTTPAPRPPRAKKARVAASS
SAAADAGELGELIQNWEPDAEASLRHIEASGAVSAEQRRAQIISQISCDQ
HARDALDAIINGATPGLQAHNGSYSSGLSVSGTFPTTTTLNPAAANHAWT
LRHPTNAAVIVLQQLLGGGVPLHEAALLSNMTPTTVPGDYIMCPKDADFA
LFAQPYADFLREQYAHGVRAFVCIGTRNEAAVLDALCPRGHTAVCLAEHN
NSRLLLVLGVGENGSDGRQFLLLVPHEHMSHVMWQALSRSSRLWLLAGLV
HCVSALQALRGKARPDAKGLLELVGPEKAEGKRSGWYSSGAYAESVMRGA
RRLQFIRAFGEEEGLAKWQAWYTDCKRRAGKKSHEAWEAGEYTNIVKEDP
SAAGKKSHEAWEAGEYTNIVKEDPSAAGKEANWVQGVNVPDTCLQRVRAI
VRDVAASSKALTGLTLSEDGDEDGAYTLYTAPNKPANAAAYNDVLRAVTA
VTGLGADAFKTHLGSKRGRESRVCKADDNVKDFARQMQLDGVALWKMKPE
AVKDLAIDEKGTSVTGTAGLTKGKALAVVMDRYNTGQQIYQTVLPSIHPA
GYRPVTLKAVQRPPPSSA*

mRNA from alignment at Contig_14:630337..637319-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_3185 ID=mRNA_3185|Name=jgi.p|Trimin1|347643|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6983bp|location=Sequence derived from alignment at Contig_14:630337..637319- (Tribonema minus UTEX_B_3156 )
ATGCTTGCCTTCGCCGCAGCCCGCGACAGCAGCAGCAGCAAGCGGCACCT
TAAGCTTTCGACCAGGCTGCAGCAATCCCTTATCGCCGACCCGACCACGC
CAGCGCCCCGTCCGCCGCGGGCGAAGAAGGCCAGAGTGGCGGCGTCGAGT
TCTGCGGCTGCAGATGCTGGGGAGCTGGGAGAGCTGGTGAGTTGATGCAT
GAACGGCTTGATTGCTGATGCTAGCTGCTGCAAGCCACTTTTGCCAACTC
TGCCCTCTTCTTGCTGGACGATGCGGCGCCGTCCACTGCTACAAAGCCTC
TATATACTTGAATAATCGATGTGTGAACAAAAAAGCTGATGACATGTACA
TTCGCGACAGCAGCATCTCTGTGGATTTCATTCGGGCATGTGCATGTATG
TTAGTCATGTACTAATACATCCGATAATGTCTCATCCCGGCCATATGACA
CTGACTGCACATTGCTCTGCTGCGTGTACATTTTGCAGTGCCAACAGGCA
GACCAGCACCTGCCACCGGAAGTGCGGCAGATACAGAACTGGGAGCCTGA
TGCAGAGGCTTCACTGCGACACATCGAAGCCAGTGGCGCCGTCTCCGCAG
AACAGCGCCGAGCGCAGATCATCAGCCAGATCTCATGCGACCAGCACGCC
CGAGACGCCCTCGACGCCATCATCAACGGCGCCACCCCTGTGCGCGCCGC
AGGCATTGAAGCGGCCACGACTCGCGTCAACGCGACCAATGCAGCTATCC
ACCGTGCGTGACGCAGCTAACCGAGCCCGCTTGCACGAGGGCCTACAGGC
TCACAATGGCAGCTACAGCAGCGGCCTCAGCGTCAGCGGCACCTTCCCGA
CTACTACAACATTGAACCCTGCAGCAGCGAACCACGCCTGGACTCTGCGG
CATCCCACCAATGCGGCGGTGATCGTGCTGCAGCAGCTGCTGGGCGGAGG
CGTGCCGCTGCACGAGGCCGCGCTCCTAAGCAACATGACGCCCACCACAG
TCCCTGGCGATTACATCATGTGCCCCAAGGACGCTGACTTCGCCCTCTTC
GCACAGCCTTACGCGGACTTTCTGCGAGAGCAGTACGCCCATGGCGTGCG
CGCCTTCGTTTGCATCGGCACCCGCAACGAGGCGGCGGTCCTGGACGCGC
TTTGCCCTCGTGGCCACACCGCCGTCTGCCTTGCTGAGCACAACAATAGC
CGGCTGCTGCTGGTGCTGGGCGTAGGCGAGAACGGCTCAGACGGGAGGCA
GTTCCTGCTGCTGGTGCCGCATGAACACATGTCGCACGTGATGTGGCAGG
CGCTGAGCCGGTCCAGCAGACTGTGGCTGCTGGCGGGCCTGGTTCACTGC
GTCAGTGCGCTCCAAGCGCTGCGGGGGAAAGCTCGGCCGGACGCGAAGGG
GTTACTGGAGCTCGTGGGGCCGGAGAAAGCGGAGGGGAAGCGCTCTGGAT
GGTACAGCAGCGGAGCGTACGCGGAGAGCGTAATGCGAGGTGCACGCCGG
CTTCAGTTCATTCGCGCCTTCGGTGAGGAGGAGGGTCTTGCTAAGTGGCA
GGCGTGGTACACGGACTGCAAGCGGCGGGCAGGTGCGTTGCTGGTGTTGG
CGCTGCTGCGGTGATTGTCGTACCCTGACACTTGTGGTTTCTAGAGCGAT
GGTTGCGCAAATGTTGAGTTCAGGTTTGAATCTTGTCCAGGTGCCAGCAA
ATGAGCTTTACAGCTGTCAAAGGTGCATGACGCACAAAACACTAGCTGCC
ACAGTCTGCAGCGGTGGCGGCTGCAGTGACGGTTCTTGTTGTTGCACAAA
ATATAAATGCCGCATGATATAAAAATGACACCGCTTAGTATTGTTACTAA
TATCAAAACGTATCAACAGATCGCAGAGCTCCTGGTATGTTTGCTGTCGG
CTTTTCGGCGCTATCGATGTTGTTAACCATGGCGGCAGCGAAGTGGCAGC
GGCGGAAACGAGGTGAGTGCTTATGATAGCCATGGTTGAGCTTGTTGGCT
TATTTACCTAGACATGGCAAAGTGCATGAGCGCGTGTATTCGTTTTCCAA
CCGAGGTGAGCCTTGCATGCAATCGGTGGTCTACTTGCAATTGGCGCGCT
GGCGCTCATCATACAAATGTTTTGTGTTTGGGCGCCGCGGCGGCGGGCGG
CGGCACGGCGGCGGGGCGGCAGCGGCGGCACAGGAATGCATGCTGCTGAC
TGACTTGCGTGCTCGCATTTCAGCGCTGCACTAGGCGCACTCCAAGCTAC
ACACCTACAGGCTTCCATGCACATGTGATCACTTGCCTTGCTGCACACCA
TGTCGGATTTGCAATCAGCACTTGCATCCGCAACTCATTGACGGCAGCGG
GCTTGACTGGCGCAACAGTTTGCAGTTCAGTGTGCACATGCAAGCAATGC
TGCTCTTGCAAACATCATCACAAGCACTTGAAGTTGACGTGCCTTTTGCT
GACCACGCAGTAGCAGTGCCACTTTGCGCGTTTTCAGCAAGAGGGGAAAA
GGATATATCAAATAAGAAATAGGCCATATTTTGGCAGCAAGACAAAGGGA
AACAGCCCAGACTAGAAGATATAACGTGCCAACCCCTAACCTGGCTCCTC
TTTAGTTGCATGACCTGACCCTTCTCCTCTTTAGTTGCATGACCTGACCC
TTCTGCCATTTAAGACACCAATAACGCTCTGCACTCGCTGTGATGTGCTG
CAGGCAAGAAGTCACATGAAGCGTGGGAGGCGGGCGAGTACACCAACATC
GTGAAGGAAGACCCAAGCGCTGCAGGTGTGCACCCACCTTATCAAATCTT
GAAGCATCTGTTGTCAACGGTGTAAAGGCCACCAAAAGTTGTGATTGGCG
CACCCTGGCTATTAGTGCTTGAAGTTGACATACCTGTTGCTGCATGTGTG
AGTCGTAGCCATGGCTCAGCTTGCTGGCTGAGTTAACCATACATGGCAAA
GTGACATGCGATCAAGGCTTGTATTCGTTTCGCATCTCAGGTGAGCATTG
CATGCAATTGGTGGTATAGTTGCAATTGTTGGCTGATGGCTTTTGGGCAC
TATCGATAATGTTAACCATGGCGGCAGCAAGTGTTGGCGGCAGAGATGAT
GTGAGTGCTTTGATAGCCATGGTTGAGCTTGTTGGCTTATTACCTACACA
TGGCAAAGTGCATGAGCGTGTGTATTCGTTTCCCAACTAAGGTGAGCCTT
GCCTGCTGCAGTGGGTGGTCTACTTGCAATTGGCGCGCTGGCGCTCATCA
TACAAATGTTTTGTGTTTGGGCGCCGCGGCGGCGGGCGGCGGCACGGCGG
CGGGGCGGCAGCGGCGGCACAGGAATGCATGCTGCTGACTGACTTGCGTG
CTCGCATTTCAGCGCTGCACTAGGCGCACTCCAAGCTACACACCTACAGG
CTTCCATGCACATGTGATCACTTGCCTTGCTGCACACCATGTCGGATTTG
CAATCAGCACTTGCATCCGCAACTCATTGACGGCAGCGGGCTTGACTGGC
GCAACAGTTTGCAGTTCAGTGTGCACATGCAAGCAATGCTGCTCTTGCAA
ACATCATCACAAGCACTTGAAGTTGACGTGCCTTTTGCTGACCACGCAGC
AGCAGTGCCACTTTGCGCGTTTTCAGCAAGAGGGGAAAAGGATATATCAA
ATAAGAAATAGGCCATATTTTGGCAGCAAGACAAAGGGAAACAGCCCAGA
CTAGAAGATATAACGTGCCAACCCCTAACCTGGCTCCTCTTTAGTTGCAT
GACCTGACCCTTCTGCCGTTTAAGACACCAATAACGCTCTGCACTCGCTG
TGATGTGCTGCAGGCAAGAAGTCACATGAAGCGTGGGAGGCGGGCGAGTA
CACCAACATCGTGAAGGAAGACCCAAGCGCTGCAGGTGTGCACCCACCTT
ATCAAATCTTGAAGCATCTGTTGTCAACGGTGTAAAGGCCACCAAAAGTT
GTGATTGGCGCACCCTGGCTATTAGTGCTTGAAGTTGACATACCTGTTGC
TGCATGTGTGAGTCGTAGCCATGGCTCAGCTTGTTGGCTGAGTTAACCAT
ACATGGCAAAGTGACATGCGATCAAGGCTTGTATTCGTTTCGCATCTCAG
GTGAGCATTGCATGCAATTGGTGGTATAGTTGCAATTGTTGGCTGATGGC
TTTTGGGCACTATCGATAATGTTAACCATGGCGGCAGCAAGTGTTGGCGG
CAGAGATGATGTGAGTGCTTTGATAGCCATGGTTGAGCTTGTTGGCTTAT
TACCTACACATGGCAAAGTGCATGAGCGTGTGTATTCGTTTTCCAACTGA
GGTGAGCCTTGCCTGCTGCAGTGGGTGGTCTACTTGCAATTGGCGCGCTG
GCGCTCATCATACAAATGTTTTGTGTTTGGGCGCCGCGGCGGCGGGCGGC
GGCACGGCGGCGGGGCGGCAGCGGCGGCACTCGAATGCATGCTGCTTGCT
GACTTGGTTGGGTGCTGGCATTACAGTGGTATCACATGCGGTGAACAAGT
AACAACCTACAGGCCTCCATGCACACGTAATTACTTGCCTCACTGCGCGC
TACGCCGGCTGCCCAATCAGCACTTGCATCCTCAACTGATCTACGGCAGC
GGGCTTGAACTGGTTCAACGGTTTGCACATGCAAGCAATGCTGCTCTGGC
TCACACTACCACAGGTACTTAAAGTTGACATGCCATTCGCTGCTGCTTCT
GCTGCTGCTACTGCGCAGGGAAGGAAGCGAATTGGGTGCAAGGCGTCAAC
GTGCCCGACACATGCCTGCAGCGCGTGCGCGCCATCGTCCGCGACGTCGC
CGCCAGCAGCAAGGCTTTGACGGGGCTCACGCTCAGCGAAGACGGCGACG
AGGACGGCGCTTACACCCTGTACACGGCGCCCAACAAGCCCGCCAACGCC
GCGGCCTACAATGACGTGCTTCGCGCTGTGACCGCTGTGACGGGGCTGGG
CGCTGACGCTTTCAAGACGCACCTGGGCAGCAAGCGCGGTGAGTGGTGCT
CACTGGCATCAGTCACATAACCTGCTGGTATTGATTCAGGATAGCGCTCT
GGATGTGGCATCACATGTTCGGTTTCATGCTGTGGGGTTGGCGCAGAGCA
TCCATGGCAATGACAATTTCAGCATGATGCCACTGAGCGCAGTACAATGT
ACAGTATGCAGCCTCTCAGTTGAAGTTCACACCACATTGAGTGTTTTTTC
GTTGCACAAAATGTAACTGCCGCATGATATAAAAATGACACAGCTCATTA
TTATTATTTTGCAACAATAAATGCATCACACCATTGCAGGGCTCCTGGTA
TGTATGCTGTCGGCTTTTCGGCGCTATCGATGTTGTTAACCATGGCGGCA
GCGAAGTGGCAGCGGCGGAAACGAGGTGAGTGCTTATGATAGCCATGGTT
GAGCTTGTTGGCTTATTACCTACACATGGCAAAGTGCATGAGGAGCGGGT
GTATTCGTTTTCAGCTGAGGTGAGCCTTGCATGCAAACTGGTGGTCTACT
TGCAATTGGCGCGCTGGCGCTCATCGTACAAATGATTTGTGTTTGGGGGC
CGCGGCGGCTGGCGGCGGCACGGCGGCGGGGCGGCAGCGGCGGCACACGA
ATGCATGCTGCTTGCTGACTTAGTTGCGTGCTCGCATTACAGTGGTATCA
CATGCGGTGCACAAGTAAAAACCTACAGGCCTCCATGCACACGTAATCAC
TTGCCTCACTGCGCGCTACGCCAGCTGCGCAATCAGCACTGGAATTTGCA
ACTGATCTATGGCAGCGGGCTTGAACTGGTGCAACAGTTTACAGATCTGA
CTGCGCATGTAAGCGAGGCTACACTGGCAAACATTTGGCACAAGCACCTG
AAGTTGACATGCCTCTTGGTACTTGAAGTTGACATGCCTTCTGCTGCATA
TGAGTTTGCTGTCAGTAATTGCAAGATAGTGCCCGAGCTTTGGTGCACTT
GGTGCAAGCGTTTGCCATTGACGCCGATGCATACACTTGTATGAGAGCGT
GGGCAGGACTGGCGGTGGCACGGCAAAGGTGTAGCAAAGTACACTGCAGC
AACTGCTGCTCCATGTTCAACCGCTCATGGCTTTGTGTTGCTGTTGTGCC
ATACTGCTGCAGGTCGCGAGAGCAGAGTATGCAAGGCTGATGACAACGTG
AAGGACTTCGCGCGGCAGATGCAGTTGGATGGGGTGGCCCTCTGGAAGAT
GAAGCCTGAAGCTGTGAAAGTGAGTGCGGAACACTTAACCTCTCACACCT
CTTGTTGCCACAATGACACCAAGGAAACACTTCAGTGACAACTTGTGTCA
TTACTTGATCAAGCATGCGTGCAGCCGTGTTGTACACGCCTGATATCTGG
CTTGTCAGTGAGGGACCCATACTTGTTCTACAACACCTCGAACAAGCTTT
GTGCATGTGGCACCAACTAGAGAACGCTTCCATGAGTGCAATATGTGGCC
CAGCCGCATCACGCAGGGTAATTGCAGTATATTGATCATCATATTCATTG
TTTTCTGTGTCTTTGTAGTGATCTGACGCGTACGCACATCAGCAGTGTAG
AGGCAGCCATGCGATGCGAGGGTCCTGCAATTCGATCCTGACATGCGGTG
CAACTTGAGCATGCCGGGGTACTGCAATTGTCGTTTCTGGATCGGTGTCT
GCCGCAGCACCTGCGCCTGCGACATGCGGCAATTGTTGGACTTCAGGAGA
GACCTGCTCCACTGCCTGATGCCTTATCAAATGCAGCTGCTGCATGCTCA
TTGTACGTGTATGTCTGCTGTCGCTGCTGGCGCAGGACTTGGCCATAGAT
GAGAAGGGCACTTCGGTGACAGGTACGGCTGGCCTGACCAAGGGCAAGGC
GCTGGCGGTGGTCATGGATAGATACAATACGGGTCAGCAGATCTACCAGA
CAGTGCTGCCCAGCATTCACCCTGCCGGCTACAGGCCTGTGACACTCAAA
GCTGTTCAGAGGCCGCCTCCGTCCTCCGCTTGA

Coding sequence (CDS) from alignment at Contig_14:630337..637319-

>mRNA_3185 ID=mRNA_3185|Name=jgi.p|Trimin1|347643|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1857bp|location=Sequence derived from alignment at Contig_14:630337..637319- (Tribonema minus UTEX_B_3156 )
ATGCTTGCCTTCGCCGCAGCCCGCGACAGCAGCAGCAGCAAGCGGCACCT
TAAGCTTTCGACCAGGCTGCAGCAATCCCTTATCGCCGACCCGACCACGC
CAGCGCCCCGTCCGCCGCGGGCGAAGAAGGCCAGAGTGGCGGCGTCGAGT
TCTGCGGCTGCAGATGCTGGGGAGCTGGGAGAGCTGATACAGAACTGGGA
GCCTGATGCAGAGGCTTCACTGCGACACATCGAAGCCAGTGGCGCCGTCT
CCGCAGAACAGCGCCGAGCGCAGATCATCAGCCAGATCTCATGCGACCAG
CACGCCCGAGACGCCCTCGACGCCATCATCAACGGCGCCACCCCTGGCCT
ACAGGCTCACAATGGCAGCTACAGCAGCGGCCTCAGCGTCAGCGGCACCT
TCCCGACTACTACAACATTGAACCCTGCAGCAGCGAACCACGCCTGGACT
CTGCGGCATCCCACCAATGCGGCGGTGATCGTGCTGCAGCAGCTGCTGGG
CGGAGGCGTGCCGCTGCACGAGGCCGCGCTCCTAAGCAACATGACGCCCA
CCACAGTCCCTGGCGATTACATCATGTGCCCCAAGGACGCTGACTTCGCC
CTCTTCGCACAGCCTTACGCGGACTTTCTGCGAGAGCAGTACGCCCATGG
CGTGCGCGCCTTCGTTTGCATCGGCACCCGCAACGAGGCGGCGGTCCTGG
ACGCGCTTTGCCCTCGTGGCCACACCGCCGTCTGCCTTGCTGAGCACAAC
AATAGCCGGCTGCTGCTGGTGCTGGGCGTAGGCGAGAACGGCTCAGACGG
GAGGCAGTTCCTGCTGCTGGTGCCGCATGAACACATGTCGCACGTGATGT
GGCAGGCGCTGAGCCGGTCCAGCAGACTGTGGCTGCTGGCGGGCCTGGTT
CACTGCGTCAGTGCGCTCCAAGCGCTGCGGGGGAAAGCTCGGCCGGACGC
GAAGGGGTTACTGGAGCTCGTGGGGCCGGAGAAAGCGGAGGGGAAGCGCT
CTGGATGGTACAGCAGCGGAGCGTACGCGGAGAGCGTAATGCGAGGTGCA
CGCCGGCTTCAGTTCATTCGCGCCTTCGGTGAGGAGGAGGGTCTTGCTAA
GTGGCAGGCGTGGTACACGGACTGCAAGCGGCGGGCAGGCAAGAAGTCAC
ATGAAGCGTGGGAGGCGGGCGAGTACACCAACATCGTGAAGGAAGACCCA
AGCGCTGCAGGCAAGAAGTCACATGAAGCGTGGGAGGCGGGCGAGTACAC
CAACATCGTGAAGGAAGACCCAAGCGCTGCAGGGAAGGAAGCGAATTGGG
TGCAAGGCGTCAACGTGCCCGACACATGCCTGCAGCGCGTGCGCGCCATC
GTCCGCGACGTCGCCGCCAGCAGCAAGGCTTTGACGGGGCTCACGCTCAG
CGAAGACGGCGACGAGGACGGCGCTTACACCCTGTACACGGCGCCCAACA
AGCCCGCCAACGCCGCGGCCTACAATGACGTGCTTCGCGCTGTGACCGCT
GTGACGGGGCTGGGCGCTGACGCTTTCAAGACGCACCTGGGCAGCAAGCG
CGGTCGCGAGAGCAGAGTATGCAAGGCTGATGACAACGTGAAGGACTTCG
CGCGGCAGATGCAGTTGGATGGGGTGGCCCTCTGGAAGATGAAGCCTGAA
GCTGTGAAAGACTTGGCCATAGATGAGAAGGGCACTTCGGTGACAGGTAC
GGCTGGCCTGACCAAGGGCAAGGCGCTGGCGGTGGTCATGGATAGATACA
ATACGGGTCAGCAGATCTACCAGACAGTGCTGCCCAGCATTCACCCTGCC
GGCTACAGGCCTGTGACACTCAAAGCTGTTCAGAGGCCGCCTCCGTCCTC
CGCTTGA