mRNA_3161 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|160699 vs. uniprot
Match: A0A835Z8F6_9STRA (G-patch domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8F6_9STRA) HSP 1 Score: 392 bits (1006), Expect = 3.610e-135 Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 1
Query: 1 MNGVLGKRALKDLGARANDAAGSGYSSFSQRMMTKMGWQEGQGLGKDGQGMNSYIKVKRKEDDAGLGREKQEREKAANQWYFNAFEDAIAAAHALDPKLRKKLKNKGEKKRKREVNEATIYQEMFEKSGGARMGMRARASQKAKWERTLDAGSAXXXXXXXXXXXXXXXXXSATESLTVSVTDPVALDADAGDGVESAETLSSSEESATDGERAAQEADXXSRLAAKRRRKEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLQGDGGDE 834
MNGVLGKRALKDLGARANDAAGSGYSSFSQRMMTKMGWQEGQGLGKDGQGMNSYIKVKRKEDDAGLGREKQEREKAANQWYFNAFEDAIAAAHALDPKLRKKLKNKGEKKRKREVNEATIYQEMFEKSGGARMGMRARASQKAKWERTLDAGSAXXXXXXXXXXXXXXXXXSATESLTVSVTDPVALDADAGDGVESAETLSSSEESATDGERAAQEADXXSRLAAKRRRKEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLQGDGGDE
Sbjct: 1 MNGVLGKRALKDLGARANDAAGSGYSSFSQRMMTKMGWQEGQGLGKDGQGMNSYIKVKRKEDDAGLGREKQEREKAANQWYFNAFEDAIAAAHALDPKLRKKLKNKGEKKRKREVNEATIYQEMFEKSGGARMGMRARASQKAKWERTLDAGSAXXXXXXXXXXXXXXXXXSATESLTVSVTDPVALDADAGDGVESAETLSSSEESATDGERAAQEADXXSRLAAKRRRKEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLQGDGGDE 278
BLAST of jgi.p|Trimin1|160699 vs. uniprot
Match: D8LE93_ECTSI (G-patch domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE93_ECTSI) HSP 1 Score: 137 bits (345), Expect = 4.290e-35 Identity = 75/149 (50.34%), Postives = 100/149 (67.11%), Query Frame = 1
Query: 10 VLGKRALKDLGARANDAAGSGYSSFSQRMMTKMGWQEGQGLGKDGQGMNSYIKVKRKEDDAGLGREKQEREKAANQWYFNAFEDAIAAAHALDPKLRKKLKNK----GEKKRKREVNEATIYQEMFEKSGGARMGMRARASQKAKWERT 444
+LGKR LK L + AND AG+GYS F++ MM KMGW EGQGLGK+ QG ++Y++VK+K+D++GLG+EK ++ K +QWYFNAF+ A+A K GE K + T+Y +MF+ +GGARMGMRARASQ K RT
Sbjct: 5 LLGKRELKRLSSVANDGAGAGYSGFAKGMMAKMGWAEGQGLGKEEQGRSTYVQVKKKDDNSGLGKEKAQQNKVNDQWYFNAFDSALANMGGKKKKXXXXXXXDKTADGEGKPEAAAEATTMYDKMFKATGGARMGMRARASQNGKLSRT 153
BLAST of jgi.p|Trimin1|160699 vs. uniprot
Match: A0A7S2V0B5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0B5_9STRA) HSP 1 Score: 105 bits (263), Expect = 2.620e-24 Identity = 61/165 (36.97%), Postives = 92/165 (55.76%), Query Frame = 1
Query: 10 VLGKRALKDLGARANDAAGSGYSSFSQRMMTKMGWQEGQGLGKDGQGMNSYIKVKRKEDDAGLGREKQEREKAANQWYFNAFEDAIAAAHALDPKLRKKLKNKGEKKRKREVNEAT-----------------IYQEMFEKSGGARMGMRARASQKAKWERTLDA 453
V+GK+ +K + ++A+GS S F++R M KMGW+EG GLGK+ G +++V ++E+ GLG E++ERE ++QW+ NAFE + +KK ++QE+F+ +GGARMGMRARA+Q AKWERT +A
Sbjct: 3 VVGKKQMKWMSTNLSEASGSAVSDFARRQMEKMGWKEGMGLGKNSDGRTEHVRVVKREESMGLGVEQKERESVSDQWWLNAFESVSNNLAKANTDNKKKXXXXXXXXXXXXXXXXXXXXXXXXXXPDAAAGQEVWQELFKATGGARMGMRARATQSAKWERTEEA 167
BLAST of jgi.p|Trimin1|160699 vs. uniprot
Match: A0A024UV82_9STRA (G-patch domain-containing protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UV82_9STRA) HSP 1 Score: 102 bits (253), Expect = 1.340e-22 Identity = 63/154 (40.91%), Postives = 91/154 (59.09%), Query Frame = 1
Query: 10 VLGKRALKDLGARANDAAGSGYSSFSQRMMTKMGWQEGQGLGKDGQGMNSYIKVKRKEDDAGLGREKQEREKAANQWYFNAFEDAIAAAHALDPKLRKKLKNK--------GEKKRKREVNEATIYQE-----MFEKSGGARMGMRARASQKAK 432
++GK+ LG AN+A SG SSF++R M KMGW EG+GLGKD QGM ++IKVKR+E++ G+G E +E+E +NQW++N + + +A+ +DP + K KRK E NE+ + E +F +GG G RA S K K
Sbjct: 8 LVGKKFQAKLGGMANEAVASGVSSFAKRQMEKMGWTEGKGLGKDEQGMATHIKVKRREENMGVGVETKEKEDQSNQWWYNVYNN-VASKIVVDPSSDDETKKAKXXXXXXXXXXKRKLEANESNLIDEPTDEQLFAATGGKLFGRRAYGSCKGK 160
BLAST of jgi.p|Trimin1|160699 vs. uniprot
Match: A0A4D9CRY8_9STRA (G-patch domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CRY8_9STRA) HSP 1 Score: 101 bits (251), Expect = 3.270e-21 Identity = 61/183 (33.33%), Postives = 100/183 (54.64%), Query Frame = 1
Query: 10 VLGKRALKDLGARANDAAGSGYSSFSQRMMTKMGWQEGQGLGKDGQGMNSYIKVKRKEDDAGLGREKQEREKAANQWYFNAFEDAI----AAAHALDPKLR--------------------------------KKLKNKGEKKRKREVNEATI--YQEMFEKSGGARMGMRARASQKAKWERT 444
++GKR LKDL ++ N +GS S +++ ++ K GW EG+GLGK+ G+ +Y+KVK++E+ AGLG E+ +R K W++++FE A+ + H+ K + G ++ ++ T+ ++++F+ +GG RMGMRARASQKAKWERT
Sbjct: 3 LVGKRGLKDLESKINHVSGSKMSVWAKNLLMKQGWAEGKGLGKNEDGIKNYVKVKQREESAGLGLEEHDRSKGLESWWYDSFECALRNFKSVGHSSSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAKSREQSGISQQPTDIGGFTVPSFEDLFKATGGKRMGMRARASQKAKWERT 185
BLAST of jgi.p|Trimin1|160699 vs. uniprot
Match: W4GKL0_9STRA (G-patch domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GKL0_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 2.000e-19 Identity = 61/155 (39.35%), Postives = 87/155 (56.13%), Query Frame = 1
Query: 10 VLGKRALKDLGARANDAAGSGYSSFSQRMMTKMGWQEGQGLGKDGQGMNSYIKVKRKEDDAGLGREKQEREKAANQWYFNAFEDAIAAAHALDPKLRKKLKNKGEKKRK--------------REVNEATIYQEMFEKSGGARMGMRARASQKAK 432
++GK+ LG AN+A SG SSF++R M KMGW EG+GLGKD QGM ++IKVKR+E++AG+G E +E+E NQW++N + + +A+ +D KK K ++E T Q +F +GG G RA S K K
Sbjct: 8 LVGKKFQAKLGGMANEAVASGVSSFAKRQMEKMGWTEGKGLGKDEQGMATHIKVKRREENAGVGVETKEKEDQTNQWWYNVYNN-VASKIVVDXXXXXXXXXAKAKKAKXXXXXXXXXKRDADNPIDEPTDEQ-LFAATGGKMFGRRAYGSCKGK 160
BLAST of jgi.p|Trimin1|160699 vs. uniprot
Match: A0A1Z5JEE6_FISSO (G-patch domain-containing protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEE6_FISSO) HSP 1 Score: 93.2 bits (230), Expect = 2.270e-19 Identity = 62/154 (40.26%), Postives = 89/154 (57.79%), Query Frame = 1
Query: 10 VLGKRALKDLGARANDAAGSGYSSFSQRMMTKMGWQEGQGLGKDGQGMNSYIKVKRKEDDAGLGREKQEREK--AANQWYFNAFEDAIAAAHALDPKLRKKLKNKGEKKRKREVNEATIYQEMFEKSGGARMGMRARASQK-AKWERTLDAGSA 462
+ G + K G+ + + S+F+++ + KMGW EG GLGK G+ +++KVK++E+ AGLG EK EK A QW+ ++ D +A +L K K K KRKRE + +E+FE +GGAR GMRA SQK AKW R+ SA
Sbjct: 10 LAGSKLRKKHGSSLQEHLSAPTSAFARKQLEKMGWTEGTGLGKKRDGITTHVKVKKREEKAGLGIEKVATEKRAAGEQWWKDSLGDTLA-------RLGSKQKKKKSSKRKREYTD----EELFEATGGARFGMRAAPSQKLAKWRRSESGASA 152
BLAST of jgi.p|Trimin1|160699 vs. uniprot
Match: A0A7R9YDY2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YDY2_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.360e-18 Identity = 61/151 (40.40%), Postives = 88/151 (58.28%), Query Frame = 1
Query: 10 VLGKRALKDLGARANDAAGSGYSSFSQRMMTKMGWQEGQGLGKDGQGMNSYIKVKRKEDDAGLGREKQEREK-AANQWYFNAFEDAIAAAHALDPKLRKKLKNKGEKKRKREVNEATIYQEMFEKSGGARMGMRARASQKAKW---ERTLD 450
++ K L+ L + N++ SG S F++R + KMGW EG+GLGK G S+++VK++ED+AGLG E + A W+ +AF A+ +KL G K+ KRE +E+F+ +GGAR+GMRARA Q KW ER LD
Sbjct: 4 LVSKDTLRGLRGKLNESVASGPSDFARRQLMKMGWSEGKGLGKREHGTVSHVRVKKREDNAGLGTETSRLQAIVAGDWWTDAFAGAV-----------QKL---GGKRAKREPT----MEELFKATGGARLGMRARAKQNGKWARAERGLD 136
BLAST of jgi.p|Trimin1|160699 vs. uniprot
Match: A0A812HZM3_9DINO (Gpatch4 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812HZM3_9DINO) HSP 1 Score: 91.7 bits (226), Expect = 4.790e-18 Identity = 56/153 (36.60%), Postives = 82/153 (53.59%), Query Frame = 1
Query: 13 LGKRALKDLGARANDAAGSGYSSFSQRMMTKMGWQEGQGLGKDGQGMNSYIKVKRKEDDAGLGREKQEREKAANQWYFNAFEDAIAAAHALDPKLRKKLKNKGEKKRKREVNEATIYQEMFEKSGGARMGMRARASQKAKWER---TLDAGSA 462
+GKR +K LGARA + GS SSF+++MM K GW+EG GLGK G+ +++ V +K++ G+G KQE +QW+F+++ A H + +E+F GG R+GMRAR Q KWER T++A A
Sbjct: 11 IGKRGMKQLGARAVEGRGSSVSSFAKKMMAKFGWEEGMGLGKGNDGITTHVVVNKKDESEGIGFNKQEN--WTDQWWFSSY----AGLHKVP-----------------------TDEELFAACGGRRLGMRARGDQSGKWERAEATVEAAVA 134
BLAST of jgi.p|Trimin1|160699 vs. uniprot
Match: A0A067CL68_SAPPC (G-patch domain-containing protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CL68_SAPPC) HSP 1 Score: 89.0 bits (219), Expect = 1.070e-17 Identity = 53/148 (35.81%), Postives = 86/148 (58.11%), Query Frame = 1
Query: 10 VLGKRALKDLGARANDAAGSGYSSFSQRMMTKMGWQEGQGLGKDGQGMNSYIKVKRKEDDAGLGREKQEREKAANQWYFNAFEDAIAAAHALDPKLRKKLKNKGE-------KKRKREVNEATIYQEMFEKSGGARMGMRARASQKAK 432
++GK+ L LG AN++A S SSF+++ M KMGW +G+GLGK+ QG+ ++IKVKR+E++ G+G E + E+ +NQW++N + + +A+ +D KKR R + +++F +GG G RA S K K
Sbjct: 8 IVGKKFLAQLGGMANESAASEVSSFAKKQMAKMGWSQGKGLGKEEQGIATHIKVKRREENTGVGTEAAKTEEQSNQWWYNVY-NKMASKIVVDAXXXXXXXXXXXXXXXXXXKKRSRAEMDVPTDEQLFAATGGKLFGRRAYGSCKGK 154 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|160699 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_3161 ID=mRNA_3161|Name=jgi.p|Trimin1|160699|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=837bp|location=Sequence derived from alignment at Contig_14:425387..426535+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAACGGAGTCTTGGGCAAGCGTGCCCTCAAAGACCTCGGCGCTCGCGCback to top protein sequence of jgi.p|Trimin1|160699 >Trimin1|160699|e_gw1.14.31.1 ID=Trimin1|160699|e_gw1.14.31.1|Name=jgi.p|Trimin1|160699|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=279bp MNGVLGKRALKDLGARANDAAGSGYSSFSQRMMTKMGWQEGQGLGKDGQGback to top mRNA from alignment at Contig_14:425387..426535+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_3161 ID=mRNA_3161|Name=jgi.p|Trimin1|160699|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1149bp|location=Sequence derived from alignment at Contig_14:425387..426535+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_14:425387..426535+ >mRNA_3161 ID=mRNA_3161|Name=jgi.p|Trimin1|160699|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=837bp|location=Sequence derived from alignment at Contig_14:425387..426535+ (Tribonema minus UTEX_B_3156 )back to top |