mRNA_292 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Match: A0A836CE44_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE44_9STRA) HSP 1 Score: 687 bits (1773), Expect = 7.470e-250 Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 1 Query: 1 MLERVTLACHGGGKAGLDDFEAARTRCGSFPQALGVRRCLPRPRGSTDVLAGYRVVRRIGGGGTGSVYAARDEYGADVALKVVANDAAAYGREVRALQALQHRNIVQMVDTQGGQEGKGPYLIVMELAEWGSLAGVVLRSAEAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAAETRGRPRGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRGLFDSILYGRANLTACQGERGNDADDEADLANFVAWGLTKAPRGRPSMEQVLQHPWLTKAAALQHSDCSLARGCSSPGRQEPEGGSSPASSSQTC 1029 MLERVTLACHGGGKAGLDDFEAARTRCGSFPQALGVRRCLPRPRGSTDVLAGYRVVRRIGGGGTGSVYAARDEYGADVALKVVANDAAAYGREVRALQALQHRNIVQMVDTQGGQEGKGPYLIVMELAEWGSLAGVVLRSAEAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAAETRGRPRGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRGLFDSILYGRANLTACQGERGNDADDEADLANFVAWGLTKAPRGRPSMEQVLQHPWLTKAAALQHSDCSLARGCSSPGRQEPEGGSSPASSSQTC Sbjct: 1 MLERVTLACHGGGKAGLDDFEAARTRCGSFPQALGVRRCLPRPRGSTDVLAGYRVVRRIGGGGTGSVYAARDEYGADVALKVVANDAAAYGREVRALQALQHRNIVQMVDTQGGQEGKGPYLIVMELAEWGSLAGVVLRSAEAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAAETRGRPRGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRGLFDSILYGRANLTACQGERGNDADDEADLANFVAWGLTKAPRGRPSMEQVLQHPWLTKAAALQHSDCSLARGCSSPGRQEPEGGSSPASSSQTC 343
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Match: A0A835YXT3_9STRA (Kinase-like domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXT3_9STRA) HSP 1 Score: 226 bits (575), Expect = 3.060e-68 Identity = 125/276 (45.29%), Postives = 175/276 (63.41%), Query Frame = 1 Query: 148 LAGYRVVRRIGGGGTGSVYAARDEYGADVALKVVANDAAAYGREVRALQALQHRNIVQMVDTQGGQEGK--GPYLIVMELAEWGSLAGVVLRSAEAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAAETR-GRPRGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRGLFDSILYG-----RANLTACQGERGNDADDEADLANFVAWGLTKAPRGRPSMEQVLQHPWLTKAAALQHSDCS 951 + G+ +++R+G G T +VY A E VALKVV D Y RE+R L+ ++H IV++ ++ + + GP+LIVMEL WGSL+G+VL +EAA + +VA ALQ+IH +GY HGD+KP N+LR G +K+CDFGCC++ +T RP+GTPAFM PEA++G G T A D W LAAT FC+VRG PPF G+ L + I+YG R+ C ++E++LA+ V WGL+K R RPS++ VL HPW+ A L+ D S Sbjct: 14 VRGFGIIKRLGSGATATVYEACTEKNEVVALKVVMRDRNTYMRELRVLKEMRHDRIVKLFRSEENESYRKTGPFLIVMELEPWGSLSGLVLWGSEAAQCMRDVAIALQYIHRKGYIHGDIKPANLLRDGCGRIKVCDFGCCKKIATDDDTVFRRPQGTPAFMSPEAYRGHGG--TTACDVWSLAATIFCVVRGHPPFM--GQNLVEKIMYGAPDSHRSAPVVC-------CEEESNLAHLVNWGLSKPARDRPSVDDVLHHPWMANAEDLRARDAS 278
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Match: A0A835ZCT2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCT2_9STRA) HSP 1 Score: 124 bits (312), Expect = 3.500e-29 Identity = 100/278 (35.97%), Postives = 129/278 (46.40%), Query Frame = 1 Query: 157 YRVVRRIGGGGTGSVYAARDEYGADVALKVVANDAA--AYGREVRALQALQ-HRNIVQMVDTQGGQEGKGPYLIVMELAEWGSLAGVVLRSAEAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAAETRGRPR--GTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRG-------------LFDSILYGRANLTACQG-------ERGNDADDEADLANFVAWGLTKAPRGRPSMEQVLQHPWL 915 Y V R+G G T VY ALKV+ + RE+ ALQAL+ H NI+ + Q+ +L V E+AE GSL GV++ E E+ L +H +G+ H DVKP NILR A+GT KL DFGCC R E +T GTPAFM PE F+ T AVD W A+T +V G PF RG + DSI++ L E+ +DD +F GL K P R ++ Q QH WL Sbjct: 6 YVVSGRLGAGVTAQVYECHSPQYGKAALKVIEKSTGRESLHRELMALQALKDHSNIISLFSIIDDQKSDITWL-VEEMAERGSLVGVMMSGMECQRMGYEIVCGLAHMHSKGFIHRDVKPANILRAANGTSKLADFGCCVRMEEGGDTARNKHFMGTPAFMAPETFKD--GVVTPAVDVWSFASTLHYVVYGTLPFDTRVRGGTKGKNAAVDDAAIEDSIMFYEPYLGTNARPRHMKNMEKRWHSDDVTKFNHFCKMGLHKNPTHRCTLGQWRQHEWL 280
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Match: UPI0007865A55 (serine/threonine protein kinase n=2 Tax=Demequina TaxID=577469 RepID=UPI0007865A55) HSP 1 Score: 125 bits (313), Expect = 2.610e-28 Identity = 103/258 (39.92%), Postives = 128/258 (49.61%), Query Frame = 1 Query: 142 DVLAGYRVVRRIGGGGTGSVYAARDEYGADVALKVV-AND----AAAYGREVRALQALQHRNIVQMVDTQGGQEGKGPYLIVMELA----------EWGSLAGVVLRSAEAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAAETR-GRPRGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRGLFDSILYGRANL------TACQGERGNDADDEADLANFVA 849 DV+ GYRVV R+G GG+GSVY DE GA+ ALK+V A + AA REVRALQ+L+H + Q++D + + +V EL E G LAG L AA+ ASAL+ +H G H DV P NI+ DG V L DFG R + A TR G GTP ++ PE G G A D W AAT + GR PF AG G L ANL TA + G D D + + VA Sbjct: 10 DVVGGYRVVGRLGTGGSGSVYRVVDEGGAEAALKLVDAREDHVAAARLAREVRALQSLRHPAVPQILDAELDDDET---FVVFELVPGKTLFDDIQEHGPLAGHAL-----AAFAERTASALEAVHAAGVVHRDVTPSNIMMGPDGPV-LIDFGLAHRTDDARLTREGLVSGTPGYVAPEVIDGAEPG--AQADRWSWAATVAYAMTGRAPFG-AGTGAISRTLEAEANLPDVAGATALRAALGRDVDARPGMRDVVA 255
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Match: A0A835ZKY0_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKY0_9STRA) HSP 1 Score: 118 bits (295), Expect = 3.760e-28 Identity = 78/195 (40.00%), Postives = 93/195 (47.69%), Query Frame = 1 Query: 448 VASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCER----PEAAAETRGRPRGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGR--GLFDSILYGRANL-------------------------TACQGERGN---DADDEADLANFVAWGLTKAPRGRPSMEQVLQHPWLTKAAA 930 VASAL +H GYAH DVKPGN++R G+VKL DFG R P + A GTPAFM PEA G G T A D W L AT LV GR PF+ G L + I+YG +G RG DA + A+L + + WGL+K P RPS+EQ L HPW A Sbjct: 1 VASALLAVHASGYAHNDVKPGNLMRTRSGSVKLGDFGSATRLPGSPASCAAPPAAAHGTPAFMSPEACSGRGG--TEASDVWSLTATLSALVFGRLPFACDGGEGALAERIMYGSPRYDDGDDDEWGXXXXXXXXXXXESRDGAPDRGGRGGGLRDAHERANLLHLLGWGLSKLPAARPSLEQFLAHPWAAAGRA 193
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Match: A0A836CFM8_9STRA (Kinase-like domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFM8_9STRA) HSP 1 Score: 121 bits (303), Expect = 4.930e-28 Identity = 97/278 (34.89%), Postives = 132/278 (47.48%), Query Frame = 1 Query: 172 RIGGGGTGSVYAARDEYGADVALKVVANDAAAYG--REVRALQALQ-HRNIVQMVDTQGGQEGKGPYLIVMELAEWGSLAGVVLRSAEAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCER-PEAAAETRGRP-RGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRG-----------LFDSILYGRANLTACQGERGND--------------ADDEADLANFVAWGLTKAPRGRPSMEQVLQHPWL 915 R+G G T V+ ALK++ RE+ ALQAL+ H NI+ + L+V E+AE GSL GV++ E +++ S L +H +G+ H DVKP NI+R A+G KL DFGCC R E +E + R GTPAFM PE F+ T AVD W LA+T +V G PF+ RG + DSI+Y C+ GN+ +DD +F GL K+P R ++ Q QH WL Sbjct: 58 RLGRGATAQVFECHSPQFGKAALKILEKTTGCESLHREIMALQALKNHSNIISLYTIIDDPTSDITCLVV-EMAERGSLVGVMVSGLECQRVTSDIVSGLMHMHSKGFLHCDVKPANIVRTAEGVSKLADFGCCVRMAEGGSEAQHRYFMGTPAFMAPEMFKD--GIVTPAVDVWSLASTLHYVVYGTLPFNSHLRGGSARRVREEGDIEDSIMY-------CEPSLGNNVRSRYLTNIESNWHSDDVTKFNHFCKTGLQKSPARRSTLGQWRQHEWL 325
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Match: A0A5J9SXK1_9POAL (Protein kinase domain-containing protein (Fragment) n=2 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9SXK1_9POAL) HSP 1 Score: 118 bits (296), Expect = 2.240e-26 Identity = 97/282 (34.40%), Postives = 137/282 (48.58%), Query Frame = 1 Query: 142 DVLAG--YRVVRRIGGGGTGSV-YAARDEYGADVALKVVANDAAA--YGREVRALQALQHRNIVQMVDTQGGQEGKGPYLIVMELAEWGSLAGVVLRSA------EAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAA--ETRGRP-RGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRGLFDSILYGRANLTACQGERGNDADDEADLANFVAWGLTKAPRGRPSMEQVLQHPWLTKAAALQHSD 945 D AG R +R +G G +G+V + A DE ++ A AA RE R L L+ ++V + + + G Y++ +E A GSLA R+ + AAY A+VA L ++H HGDVK N++ ADG KL DFGC R + + RP G+PAFM PE +G G AA D W LA T + G P+S +F ++ R T E +EA +F+ L + PR RP+ EQ+LQHP+L A+ L D Sbjct: 2 DAAAGKQLRRLRTLGSGASGAVVWLASDEASGELLAVKSAGPVAAEQLAREARVLSGLRSPHVVPCLGARA--DAGGEYMLFLEFAPRGSLADEAARNGGRLAERDVAAYAADVARGLAYLHGESLVHGDVKAANVMVGADGRAKLADFGCARRVDGCDGDDDSNRPIGGSPAFMAPEVARGEEQG--AAADVWALACTVIEMATGAAPWSGGVDDVFAAVH--RIGFTDAVPEVPAWMSEEAK--SFLRVCLARNPRDRPTAEQLLQHPFLASASELAKQD 275
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Match: A0A835KHD7_9POAL (Protein kinase domain-containing protein n=1 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835KHD7_9POAL) HSP 1 Score: 117 bits (293), Expect = 1.110e-25 Identity = 99/283 (34.98%), Postives = 141/283 (49.82%), Query Frame = 1 Query: 136 STDVLAG-YRVVRRIGGGGTGS-VYAARDEYGADV-ALKVVA-NDAAAYGREVRALQALQHRNIVQMVDTQGGQEGK-GPYLIVMELAEWGSLAGVVLRSA-------EAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAAETRGRPRGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRGLFDSILYGRANLTACQGERGNDADDE------ADLANFVAWGLTKAPRGRPSMEQVLQHPWLTKAAA 930 +T V +G + VR +G G +G+ V+ A DE ++ A+K A A A RE + L+ ++V + GG++ + G Y + +E A G+LA RS +AAAY A+VA L ++H G HGDVKP N++ DG KL DFGC + A A G GTPAFM PE +G G A D W L T + GR P+S G+ +L + DA E A+ +F+A L + P RP+ Q+L+HP+L AAA Sbjct: 3 ATAVSSGRWTRVRTLGRGASGAEVFLAADEASGELFAVKAAAAGGAEALRRERGVMAGLRSPHVVPCI---GGRDARDGSYQLFLEFAPGGTLADAAARSPGGHLGERDAAAYAADVARGLAYVHGAGLVHGDVKPRNVVIGRDGRAKLADFGCAQSAAAGAAAIG---GTPAFMAPEVARGEEQG--PAADVWALGCTLLEMATGRAPWS----GVVADVLAAVRLIGY------TDASPEVPRWLSAEAKDFLAGCLARRPCDRPTAAQLLEHPFLASAAA 267
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Match: A0A3L6SUW8_PANMI (Mitogen-activated protein kinase kinase kinase ANP1-like n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6SUW8_PANMI) HSP 1 Score: 115 bits (288), Expect = 3.200e-25 Identity = 97/273 (35.53%), Postives = 133/273 (48.72%), Query Frame = 1 Query: 166 VRRIGGGGTGS-VYAARDEYGADV-ALKVV-ANDAAAYGREVRALQALQHRNIVQMVDTQGGQEGKGPYLIVMELAEWGSLAGVVLRSA------EAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAAETRGRPRGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFS-VAGRGLFDSILYGRANLTACQGERGNDADDE------ADLANFVAWGLTKAPRGRPSMEQVLQHPWLTKAAALQ 936 VR +G G +G+ V+ A DE ++ A+K A+ A A RE + L+ ++V + +GG++G Y + +E A G+LA R +AAAY A+VA L ++H G HGDVKP N++ DG KL DFGC AAA G GTPAFM PE +G G A D W L T + G P+S V G L L G DA E A+ +FV L + P RP+ Q+L+HP+L A L+ Sbjct: 14 VRTLGRGASGAEVFLATDEASGELFAVKAAPASAAEALRRERGVMAGLRSPHVVPCIGGRGGRDGS--YELFLEFAPGGTLADAAARCGGRLAERDAAAYAADVARGLAYVHGAGLVHGDVKPRNVVIGGDGRAKLADFGCARSAGAAAGAIG---GTPAFMAPEVARGEEQG--PAADVWALGCTVLEIATGCAPWSGVVGDVLAAVRLIGYT-----------DAAPEVPRWLSAEARDFVGRCLARRPGDRPTAAQLLEHPFLASAGGLK 268
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Match: UPI0019D6A737 (mitogen-activated protein kinase kinase kinase 17-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D6A737) HSP 1 Score: 115 bits (287), Expect = 4.260e-25 Identity = 96/276 (34.78%), Postives = 133/276 (48.19%), Query Frame = 1 Query: 166 VRRIGGGGTGS-VYAARDEYGADV-ALKVVANDAAAYGREVR----ALQALQHRNIVQMVDTQGGQEGKGPYLIVMELAEWGSLAGVVLRSA------EAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAAETRGRPRGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFS-VAGRGLFDSILYGRANLTACQGERGNDADDE------ADLANFVAWGLTKAPRGRPSMEQVLQHPWLTKAAALQ 936 VR +G G +G+ V+ A DE ++ A+K A+A +R + L+ ++V + + G++G Y + +E A G+LA R +AAAY A+VA L ++H G HGDVKP N++ DG KL DFGC R AA G GTPAFM PE +G G G A D W L T + GR P+S V G L L G DA E A+ +FV L + P RP+ Q+L+HP+L A A + Sbjct: 11 VRTLGRGASGAEVFLAADEASGELFAVKAAPAPASAAAEALRQERGVMSGLRSPHVVPCLGGRAGRDGS--YELFLEFAPGGTLADAAARRGGRLPERDAAAYAADVARGLAYVHGAGLVHGDVKPRNVVIGGDGRAKLADFGCARRAGAAGAPIG---GTPAFMAPEVARGEGQG--PAADVWALGCTVIEMATGRAPWSGVVGDVLAAVRLIGYT-----------DAAPEVPRWLSAEARDFVDRCLARRPGDRPTAAQLLEHPFLASADAAK 268 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_292 ID=mRNA_292|Name=jgi.p|Trimin1|157388|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1032bp|location=Sequence derived from alignment at Contig_3:884154..885185- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCTGGAGCGAGTCACCCTCGCGTGCCACGGGGGCGGCAAGGCGGGCCTback to top protein sequence of jgi.p|Trimin1|157388 >Trimin1|157388|e_gw1.3.116.1 ID=Trimin1|157388|e_gw1.3.116.1|Name=jgi.p|Trimin1|157388|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=344bp MLERVTLACHGGGKAGLDDFEAARTRCGSFPQALGVRRCLPRPRGSTDVLback to top mRNA from alignment at Contig_3:884154..885185- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_292 ID=mRNA_292|Name=jgi.p|Trimin1|157388|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1032bp|location=Sequence derived from alignment at Contig_3:884154..885185- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_3:884154..885185- >mRNA_292 ID=mRNA_292|Name=jgi.p|Trimin1|157388|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1032bp|location=Sequence derived from alignment at Contig_3:884154..885185- (Tribonema minus UTEX_B_3156 )back to top |