mRNA_292 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|157388
Unique NamemRNA_292
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Match: A0A836CE44_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE44_9STRA)

HSP 1 Score: 687 bits (1773), Expect = 7.470e-250
Identity = 343/343 (100.00%), Postives = 343/343 (100.00%), Query Frame = 1
Query:    1 MLERVTLACHGGGKAGLDDFEAARTRCGSFPQALGVRRCLPRPRGSTDVLAGYRVVRRIGGGGTGSVYAARDEYGADVALKVVANDAAAYGREVRALQALQHRNIVQMVDTQGGQEGKGPYLIVMELAEWGSLAGVVLRSAEAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAAETRGRPRGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRGLFDSILYGRANLTACQGERGNDADDEADLANFVAWGLTKAPRGRPSMEQVLQHPWLTKAAALQHSDCSLARGCSSPGRQEPEGGSSPASSSQTC 1029
            MLERVTLACHGGGKAGLDDFEAARTRCGSFPQALGVRRCLPRPRGSTDVLAGYRVVRRIGGGGTGSVYAARDEYGADVALKVVANDAAAYGREVRALQALQHRNIVQMVDTQGGQEGKGPYLIVMELAEWGSLAGVVLRSAEAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAAETRGRPRGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRGLFDSILYGRANLTACQGERGNDADDEADLANFVAWGLTKAPRGRPSMEQVLQHPWLTKAAALQHSDCSLARGCSSPGRQEPEGGSSPASSSQTC
Sbjct:    1 MLERVTLACHGGGKAGLDDFEAARTRCGSFPQALGVRRCLPRPRGSTDVLAGYRVVRRIGGGGTGSVYAARDEYGADVALKVVANDAAAYGREVRALQALQHRNIVQMVDTQGGQEGKGPYLIVMELAEWGSLAGVVLRSAEAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAAETRGRPRGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRGLFDSILYGRANLTACQGERGNDADDEADLANFVAWGLTKAPRGRPSMEQVLQHPWLTKAAALQHSDCSLARGCSSPGRQEPEGGSSPASSSQTC 343          
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Match: A0A835YXT3_9STRA (Kinase-like domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXT3_9STRA)

HSP 1 Score: 226 bits (575), Expect = 3.060e-68
Identity = 125/276 (45.29%), Postives = 175/276 (63.41%), Query Frame = 1
Query:  148 LAGYRVVRRIGGGGTGSVYAARDEYGADVALKVVANDAAAYGREVRALQALQHRNIVQMVDTQGGQEGK--GPYLIVMELAEWGSLAGVVLRSAEAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAAETR-GRPRGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRGLFDSILYG-----RANLTACQGERGNDADDEADLANFVAWGLTKAPRGRPSMEQVLQHPWLTKAAALQHSDCS 951
            + G+ +++R+G G T +VY A  E    VALKVV  D   Y RE+R L+ ++H  IV++  ++  +  +  GP+LIVMEL  WGSL+G+VL  +EAA  + +VA ALQ+IH +GY HGD+KP N+LR   G +K+CDFGCC++     +T   RP+GTPAFM PEA++G G   T A D W LAAT FC+VRG PPF   G+ L + I+YG     R+    C        ++E++LA+ V WGL+K  R RPS++ VL HPW+  A  L+  D S
Sbjct:   14 VRGFGIIKRLGSGATATVYEACTEKNEVVALKVVMRDRNTYMRELRVLKEMRHDRIVKLFRSEENESYRKTGPFLIVMELEPWGSLSGLVLWGSEAAQCMRDVAIALQYIHRKGYIHGDIKPANLLRDGCGRIKVCDFGCCKKIATDDDTVFRRPQGTPAFMSPEAYRGHGG--TTACDVWSLAATIFCVVRGHPPFM--GQNLVEKIMYGAPDSHRSAPVVC-------CEEESNLAHLVNWGLSKPARDRPSVDDVLHHPWMANAEDLRARDAS 278          
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Match: A0A835ZCT2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCT2_9STRA)

HSP 1 Score: 124 bits (312), Expect = 3.500e-29
Identity = 100/278 (35.97%), Postives = 129/278 (46.40%), Query Frame = 1
Query:  157 YRVVRRIGGGGTGSVYAARDEYGADVALKVVANDAA--AYGREVRALQALQ-HRNIVQMVDTQGGQEGKGPYLIVMELAEWGSLAGVVLRSAEAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAAETRGRPR--GTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRG-------------LFDSILYGRANLTACQG-------ERGNDADDEADLANFVAWGLTKAPRGRPSMEQVLQHPWL 915
            Y V  R+G G T  VY          ALKV+       +  RE+ ALQAL+ H NI+ +      Q+    +L V E+AE GSL GV++   E      E+   L  +H +G+ H DVKP NILR A+GT KL DFGCC R E   +T       GTPAFM PE F+      T AVD W  A+T   +V G  PF    RG             + DSI++    L            E+   +DD     +F   GL K P  R ++ Q  QH WL
Sbjct:    6 YVVSGRLGAGVTAQVYECHSPQYGKAALKVIEKSTGRESLHRELMALQALKDHSNIISLFSIIDDQKSDITWL-VEEMAERGSLVGVMMSGMECQRMGYEIVCGLAHMHSKGFIHRDVKPANILRAANGTSKLADFGCCVRMEEGGDTARNKHFMGTPAFMAPETFKD--GVVTPAVDVWSFASTLHYVVYGTLPFDTRVRGGTKGKNAAVDDAAIEDSIMFYEPYLGTNARPRHMKNMEKRWHSDDVTKFNHFCKMGLHKNPTHRCTLGQWRQHEWL 280          
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Match: UPI0007865A55 (serine/threonine protein kinase n=2 Tax=Demequina TaxID=577469 RepID=UPI0007865A55)

HSP 1 Score: 125 bits (313), Expect = 2.610e-28
Identity = 103/258 (39.92%), Postives = 128/258 (49.61%), Query Frame = 1
Query:  142 DVLAGYRVVRRIGGGGTGSVYAARDEYGADVALKVV-AND----AAAYGREVRALQALQHRNIVQMVDTQGGQEGKGPYLIVMELA----------EWGSLAGVVLRSAEAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAAETR-GRPRGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRGLFDSILYGRANL------TACQGERGNDADDEADLANFVA 849
            DV+ GYRVV R+G GG+GSVY   DE GA+ ALK+V A +    AA   REVRALQ+L+H  + Q++D +   +      +V EL           E G LAG  L     AA+    ASAL+ +H  G  H DV P NI+   DG V L DFG   R + A  TR G   GTP ++ PE   G   G  A  D W  AAT    + GR PF  AG G     L   ANL      TA +   G D D    + + VA
Sbjct:   10 DVVGGYRVVGRLGTGGSGSVYRVVDEGGAEAALKLVDAREDHVAAARLAREVRALQSLRHPAVPQILDAELDDDET---FVVFELVPGKTLFDDIQEHGPLAGHAL-----AAFAERTASALEAVHAAGVVHRDVTPSNIMMGPDGPV-LIDFGLAHRTDDARLTREGLVSGTPGYVAPEVIDGAEPG--AQADRWSWAATVAYAMTGRAPFG-AGTGAISRTLEAEANLPDVAGATALRAALGRDVDARPGMRDVVA 255          
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Match: A0A835ZKY0_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKY0_9STRA)

HSP 1 Score: 118 bits (295), Expect = 3.760e-28
Identity = 78/195 (40.00%), Postives = 93/195 (47.69%), Query Frame = 1
Query:  448 VASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCER----PEAAAETRGRPRGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGR--GLFDSILYGRANL-------------------------TACQGERGN---DADDEADLANFVAWGLTKAPRGRPSMEQVLQHPWLTKAAA 930
            VASAL  +H  GYAH DVKPGN++R   G+VKL DFG   R    P + A       GTPAFM PEA  G G   T A D W L AT   LV GR PF+  G    L + I+YG                                +G RG    DA + A+L + + WGL+K P  RPS+EQ L HPW     A
Sbjct:    1 VASALLAVHASGYAHNDVKPGNLMRTRSGSVKLGDFGSATRLPGSPASCAAPPAAAHGTPAFMSPEACSGRGG--TEASDVWSLTATLSALVFGRLPFACDGGEGALAERIMYGSPRYDDGDDDEWGXXXXXXXXXXXESRDGAPDRGGRGGGLRDAHERANLLHLLGWGLSKLPAARPSLEQFLAHPWAAAGRA 193          
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Match: A0A836CFM8_9STRA (Kinase-like domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFM8_9STRA)

HSP 1 Score: 121 bits (303), Expect = 4.930e-28
Identity = 97/278 (34.89%), Postives = 132/278 (47.48%), Query Frame = 1
Query:  172 RIGGGGTGSVYAARDEYGADVALKVVANDAAAYG--REVRALQALQ-HRNIVQMVDTQGGQEGKGPYLIVMELAEWGSLAGVVLRSAEAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCER-PEAAAETRGRP-RGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRG-----------LFDSILYGRANLTACQGERGND--------------ADDEADLANFVAWGLTKAPRGRPSMEQVLQHPWL 915
            R+G G T  V+          ALK++          RE+ ALQAL+ H NI+ +             L+V E+AE GSL GV++   E     +++ S L  +H +G+ H DVKP NI+R A+G  KL DFGCC R  E  +E + R   GTPAFM PE F+      T AVD W LA+T   +V G  PF+   RG           + DSI+Y       C+   GN+              +DD     +F   GL K+P  R ++ Q  QH WL
Sbjct:   58 RLGRGATAQVFECHSPQFGKAALKILEKTTGCESLHREIMALQALKNHSNIISLYTIIDDPTSDITCLVV-EMAERGSLVGVMVSGLECQRVTSDIVSGLMHMHSKGFLHCDVKPANIVRTAEGVSKLADFGCCVRMAEGGSEAQHRYFMGTPAFMAPEMFKD--GIVTPAVDVWSLASTLHYVVYGTLPFNSHLRGGSARRVREEGDIEDSIMY-------CEPSLGNNVRSRYLTNIESNWHSDDVTKFNHFCKTGLQKSPARRSTLGQWRQHEWL 325          
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Match: A0A5J9SXK1_9POAL (Protein kinase domain-containing protein (Fragment) n=2 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9SXK1_9POAL)

HSP 1 Score: 118 bits (296), Expect = 2.240e-26
Identity = 97/282 (34.40%), Postives = 137/282 (48.58%), Query Frame = 1
Query:  142 DVLAG--YRVVRRIGGGGTGSV-YAARDEYGADVALKVVANDAAA--YGREVRALQALQHRNIVQMVDTQGGQEGKGPYLIVMELAEWGSLAGVVLRSA------EAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAA--ETRGRP-RGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRGLFDSILYGRANLTACQGERGNDADDEADLANFVAWGLTKAPRGRPSMEQVLQHPWLTKAAALQHSD 945
            D  AG   R +R +G G +G+V + A DE   ++     A   AA    RE R L  L+  ++V  +  +   +  G Y++ +E A  GSLA    R+       + AAY A+VA  L ++H     HGDVK  N++  ADG  KL DFGC  R +     +   RP  G+PAFM PE  +G   G  AA D W LA T   +  G  P+S     +F ++   R   T    E      +EA   +F+   L + PR RP+ EQ+LQHP+L  A+ L   D
Sbjct:    2 DAAAGKQLRRLRTLGSGASGAVVWLASDEASGELLAVKSAGPVAAEQLAREARVLSGLRSPHVVPCLGARA--DAGGEYMLFLEFAPRGSLADEAARNGGRLAERDVAAYAADVARGLAYLHGESLVHGDVKAANVMVGADGRAKLADFGCARRVDGCDGDDDSNRPIGGSPAFMAPEVARGEEQG--AAADVWALACTVIEMATGAAPWSGGVDDVFAAVH--RIGFTDAVPEVPAWMSEEAK--SFLRVCLARNPRDRPTAEQLLQHPFLASASELAKQD 275          
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Match: A0A835KHD7_9POAL (Protein kinase domain-containing protein n=1 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835KHD7_9POAL)

HSP 1 Score: 117 bits (293), Expect = 1.110e-25
Identity = 99/283 (34.98%), Postives = 141/283 (49.82%), Query Frame = 1
Query:  136 STDVLAG-YRVVRRIGGGGTGS-VYAARDEYGADV-ALKVVA-NDAAAYGREVRALQALQHRNIVQMVDTQGGQEGK-GPYLIVMELAEWGSLAGVVLRSA-------EAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAAETRGRPRGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRGLFDSILYGRANLTACQGERGNDADDE------ADLANFVAWGLTKAPRGRPSMEQVLQHPWLTKAAA 930
            +T V +G +  VR +G G +G+ V+ A DE   ++ A+K  A   A A  RE   +  L+  ++V  +   GG++ + G Y + +E A  G+LA    RS        +AAAY A+VA  L ++H  G  HGDVKP N++   DG  KL DFGC +   A A   G   GTPAFM PE  +G   G   A D W L  T   +  GR P+S    G+   +L     +         DA  E      A+  +F+A  L + P  RP+  Q+L+HP+L  AAA
Sbjct:    3 ATAVSSGRWTRVRTLGRGASGAEVFLAADEASGELFAVKAAAAGGAEALRRERGVMAGLRSPHVVPCI---GGRDARDGSYQLFLEFAPGGTLADAAARSPGGHLGERDAAAYAADVARGLAYVHGAGLVHGDVKPRNVVIGRDGRAKLADFGCAQSAAAGAAAIG---GTPAFMAPEVARGEEQG--PAADVWALGCTLLEMATGRAPWS----GVVADVLAAVRLIGY------TDASPEVPRWLSAEAKDFLAGCLARRPCDRPTAAQLLEHPFLASAAA 267          
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Match: A0A3L6SUW8_PANMI (Mitogen-activated protein kinase kinase kinase ANP1-like n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6SUW8_PANMI)

HSP 1 Score: 115 bits (288), Expect = 3.200e-25
Identity = 97/273 (35.53%), Postives = 133/273 (48.72%), Query Frame = 1
Query:  166 VRRIGGGGTGS-VYAARDEYGADV-ALKVV-ANDAAAYGREVRALQALQHRNIVQMVDTQGGQEGKGPYLIVMELAEWGSLAGVVLRSA------EAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAAETRGRPRGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFS-VAGRGLFDSILYGRANLTACQGERGNDADDE------ADLANFVAWGLTKAPRGRPSMEQVLQHPWLTKAAALQ 936
            VR +G G +G+ V+ A DE   ++ A+K   A+ A A  RE   +  L+  ++V  +  +GG++G   Y + +E A  G+LA    R        +AAAY A+VA  L ++H  G  HGDVKP N++   DG  KL DFGC     AAA   G   GTPAFM PE  +G   G   A D W L  T   +  G  P+S V G  L    L G             DA  E      A+  +FV   L + P  RP+  Q+L+HP+L  A  L+
Sbjct:   14 VRTLGRGASGAEVFLATDEASGELFAVKAAPASAAEALRRERGVMAGLRSPHVVPCIGGRGGRDGS--YELFLEFAPGGTLADAAARCGGRLAERDAAAYAADVARGLAYVHGAGLVHGDVKPRNVVIGGDGRAKLADFGCARSAGAAAGAIG---GTPAFMAPEVARGEEQG--PAADVWALGCTVLEIATGCAPWSGVVGDVLAAVRLIGYT-----------DAAPEVPRWLSAEARDFVGRCLARRPGDRPTAAQLLEHPFLASAGGLK 268          
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Match: UPI0019D6A737 (mitogen-activated protein kinase kinase kinase 17-like n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D6A737)

HSP 1 Score: 115 bits (287), Expect = 4.260e-25
Identity = 96/276 (34.78%), Postives = 133/276 (48.19%), Query Frame = 1
Query:  166 VRRIGGGGTGS-VYAARDEYGADV-ALKVVANDAAAYGREVR----ALQALQHRNIVQMVDTQGGQEGKGPYLIVMELAEWGSLAGVVLRSA------EAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAAETRGRPRGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFS-VAGRGLFDSILYGRANLTACQGERGNDADDE------ADLANFVAWGLTKAPRGRPSMEQVLQHPWLTKAAALQ 936
            VR +G G +G+ V+ A DE   ++ A+K     A+A    +R     +  L+  ++V  +  + G++G   Y + +E A  G+LA    R        +AAAY A+VA  L ++H  G  HGDVKP N++   DG  KL DFGC  R  AA    G   GTPAFM PE  +G G G   A D W L  T   +  GR P+S V G  L    L G             DA  E      A+  +FV   L + P  RP+  Q+L+HP+L  A A +
Sbjct:   11 VRTLGRGASGAEVFLAADEASGELFAVKAAPAPASAAAEALRQERGVMSGLRSPHVVPCLGGRAGRDGS--YELFLEFAPGGTLADAAARRGGRLPERDAAAYAADVARGLAYVHGAGLVHGDVKPRNVVIGGDGRAKLADFGCARRAGAAGAPIG---GTPAFMAPEVARGEGQG--PAADVWALGCTVIEMATGRAPWSGVVGDVLAAVRLIGYT-----------DAAPEVPRWLSAEARDFVDRCLARRPGDRPTAAQLLEHPFLASADAAK 268          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|157388 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CE44_9STRA7.470e-250100.00Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835YXT3_9STRA3.060e-6845.29Kinase-like domain-containing protein n=2 Tax=Trib... [more]
A0A835ZCT2_9STRA3.500e-2935.97Kinase-like domain-containing protein n=1 Tax=Trib... [more]
UPI0007865A552.610e-2839.92serine/threonine protein kinase n=2 Tax=Demequina ... [more]
A0A835ZKY0_9STRA3.760e-2840.00Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A836CFM8_9STRA4.930e-2834.89Kinase-like domain-containing protein n=2 Tax=Trib... [more]
A0A5J9SXK1_9POAL2.240e-2634.40Protein kinase domain-containing protein (Fragment... [more]
A0A835KHD7_9POAL1.110e-2534.98Protein kinase domain-containing protein n=1 Tax=D... [more]
A0A3L6SUW8_PANMI3.200e-2535.53Mitogen-activated protein kinase kinase kinase ANP... [more]
UPI0019D6A7374.260e-2534.78mitogen-activated protein kinase kinase kinase 17-... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_3contigContig_3:884154..885185 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|157388|e_gw1.3.116.1
Descriptionserine threonine protein kinase
COG categoryKLT
Max annot lvl201174|Actinobacteria
EggNOG OGsCOG0515@1|root,COG0515@2|Bacteria,2GIV0@201174|Actinobacteria
Evalue1.89e-26
Seed ortholog479433.Caci_3275
Hectar predicted targeting categoryother localisation
TranscriptId157710
TrackFilteredModels1
ProteinId157388
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157388gene_292Tribonema minus UTEX_B_3156 geneContig_3 884154..885185 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_292_1exon_292_1Tribonema minus UTEX_B_3156 exonContig_3 884154..885185 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_292CDS_292Tribonema minus UTEX_B_3156 CDSContig_3 884154..885185 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|157388Trimin1|157388|e_gw1.3.116.1Tribonema minus UTEX_B_3156 polypeptideContig_3 884154..885185 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_292 ID=mRNA_292|Name=jgi.p|Trimin1|157388|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1032bp|location=Sequence derived from alignment at Contig_3:884154..885185- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGGAGCGAGTCACCCTCGCGTGCCACGGGGGCGGCAAGGCGGGCCT
CGATGACTTCGAGGCCGCCCGCACGCGCTGCGGCAGCTTCCCGCAGGCTC
TCGGTGTCAGGCGCTGCCTCCCTCGCCCGAGGGGCTCGACCGACGTGCTG
GCCGGCTACCGGGTGGTGAGGAGGATCGGGGGGGGTGGGACGGGGAGCGT
GTACGCGGCGCGCGATGAGTACGGCGCGGACGTGGCTCTGAAGGTCGTCG
CAAACGACGCGGCGGCCTACGGAAGGGAAGTCCGCGCCCTGCAGGCGCTG
CAGCACCGCAACATCGTGCAGATGGTGGACACGCAGGGAGGCCAGGAGGG
CAAGGGCCCCTACCTCATTGTCATGGAGCTCGCGGAGTGGGGTTCGCTGG
CGGGGGTGGTGCTGCGCAGCGCGGAGGCGGCCGCCTACGTGGCGGAGGTG
GCGAGTGCTCTGCAGTTCATTCACGAGAGGGGCTACGCGCACGGGGACGT
CAAGCCGGGCAACATTCTGAGGTTCGCAGACGGGACGGTCAAGTTGTGCG
ATTTTGGTTGCTGCGAGAGGCCGGAGGCGGCGGCGGAGACCAGGGGGCGC
CCCCGCGGAACTCCCGCTTTCATGCCTCCGGAGGCGTTTCAGGGCACCGG
CAGCGGCTGGACGGCGGCGGTGGACTCGTGGGGGCTGGCCGCCACATCCT
TCTGCCTGGTCCGCGGCCGCCCTCCCTTCTCCGTGGCAGGCAGGGGCCTG
TTCGACAGCATCCTCTACGGGAGGGCGAACCTGACAGCGTGCCAGGGGGA
GAGGGGCAACGACGCGGACGACGAGGCGGACCTGGCGAACTTCGTCGCGT
GGGGGCTGACCAAGGCCCCCCGCGGGCGACCCTCCATGGAGCAGGTGCTG
CAGCACCCCTGGCTGACCAAGGCCGCCGCCCTCCAGCACAGCGACTGCTC
CCTCGCCCGAGGGTGCAGCAGCCCGGGCCGGCAGGAGCCTGAGGGCGGGT
CGTCCCCGGCATCGAGCTCGCAGACATGCTAG
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protein sequence of jgi.p|Trimin1|157388

>Trimin1|157388|e_gw1.3.116.1 ID=Trimin1|157388|e_gw1.3.116.1|Name=jgi.p|Trimin1|157388|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=344bp
MLERVTLACHGGGKAGLDDFEAARTRCGSFPQALGVRRCLPRPRGSTDVL
AGYRVVRRIGGGGTGSVYAARDEYGADVALKVVANDAAAYGREVRALQAL
QHRNIVQMVDTQGGQEGKGPYLIVMELAEWGSLAGVVLRSAEAAAYVAEV
ASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCERPEAAAETRGR
PRGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRGL
FDSILYGRANLTACQGERGNDADDEADLANFVAWGLTKAPRGRPSMEQVL
QHPWLTKAAALQHSDCSLARGCSSPGRQEPEGGSSPASSSQTC*
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mRNA from alignment at Contig_3:884154..885185-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_292 ID=mRNA_292|Name=jgi.p|Trimin1|157388|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1032bp|location=Sequence derived from alignment at Contig_3:884154..885185- (Tribonema minus UTEX_B_3156 )
ATGCTGGAGCGAGTCACCCTCGCGTGCCACGGGGGCGGCAAGGCGGGCCT CGATGACTTCGAGGCCGCCCGCACGCGCTGCGGCAGCTTCCCGCAGGCTC TCGGTGTCAGGCGCTGCCTCCCTCGCCCGAGGGGCTCGACCGACGTGCTG GCCGGCTACCGGGTGGTGAGGAGGATCGGGGGGGGTGGGACGGGGAGCGT GTACGCGGCGCGCGATGAGTACGGCGCGGACGTGGCTCTGAAGGTCGTCG CAAACGACGCGGCGGCCTACGGAAGGGAAGTCCGCGCCCTGCAGGCGCTG CAGCACCGCAACATCGTGCAGATGGTGGACACGCAGGGAGGCCAGGAGGG CAAGGGCCCCTACCTCATTGTCATGGAGCTCGCGGAGTGGGGTTCGCTGG CGGGGGTGGTGCTGCGCAGCGCGGAGGCGGCCGCCTACGTGGCGGAGGTG GCGAGTGCTCTGCAGTTCATTCACGAGAGGGGCTACGCGCACGGGGACGT CAAGCCGGGCAACATTCTGAGGTTCGCAGACGGGACGGTCAAGTTGTGCG ATTTTGGTTGCTGCGAGAGGCCGGAGGCGGCGGCGGAGACCAGGGGGCGC CCCCGCGGAACTCCCGCTTTCATGCCTCCGGAGGCGTTTCAGGGCACCGG CAGCGGCTGGACGGCGGCGGTGGACTCGTGGGGGCTGGCCGCCACATCCT TCTGCCTGGTCCGCGGCCGCCCTCCCTTCTCCGTGGCAGGCAGGGGCCTG TTCGACAGCATCCTCTACGGGAGGGCGAACCTGACAGCGTGCCAGGGGGA GAGGGGCAACGACGCGGACGACGAGGCGGACCTGGCGAACTTCGTCGCGT GGGGGCTGACCAAGGCCCCCCGCGGGCGACCCTCCATGGAGCAGGTGCTG CAGCACCCCTGGCTGACCAAGGCCGCCGCCCTCCAGCACAGCGACTGCTC CCTCGCCCGAGGGTGCAGCAGCCCGGGCCGGCAGGAGCCTGAGGGCGGGT CGTCCCCGGCATCGAGCTCGCAGACATGCTAG
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Coding sequence (CDS) from alignment at Contig_3:884154..885185-

>mRNA_292 ID=mRNA_292|Name=jgi.p|Trimin1|157388|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1032bp|location=Sequence derived from alignment at Contig_3:884154..885185- (Tribonema minus UTEX_B_3156 )
ATGCTGGAGCGAGTCACCCTCGCGTGCCACGGGGGCGGCAAGGCGGGCCT
CGATGACTTCGAGGCCGCCCGCACGCGCTGCGGCAGCTTCCCGCAGGCTC
TCGGTGTCAGGCGCTGCCTCCCTCGCCCGAGGGGCTCGACCGACGTGCTG
GCCGGCTACCGGGTGGTGAGGAGGATCGGGGGGGGTGGGACGGGGAGCGT
GTACGCGGCGCGCGATGAGTACGGCGCGGACGTGGCTCTGAAGGTCGTCG
CAAACGACGCGGCGGCCTACGGAAGGGAAGTCCGCGCCCTGCAGGCGCTG
CAGCACCGCAACATCGTGCAGATGGTGGACACGCAGGGAGGCCAGGAGGG
CAAGGGCCCCTACCTCATTGTCATGGAGCTCGCGGAGTGGGGTTCGCTGG
CGGGGGTGGTGCTGCGCAGCGCGGAGGCGGCCGCCTACGTGGCGGAGGTG
GCGAGTGCTCTGCAGTTCATTCACGAGAGGGGCTACGCGCACGGGGACGT
CAAGCCGGGCAACATTCTGAGGTTCGCAGACGGGACGGTCAAGTTGTGCG
ATTTTGGTTGCTGCGAGAGGCCGGAGGCGGCGGCGGAGACCAGGGGGCGC
CCCCGCGGAACTCCCGCTTTCATGCCTCCGGAGGCGTTTCAGGGCACCGG
CAGCGGCTGGACGGCGGCGGTGGACTCGTGGGGGCTGGCCGCCACATCCT
TCTGCCTGGTCCGCGGCCGCCCTCCCTTCTCCGTGGCAGGCAGGGGCCTG
TTCGACAGCATCCTCTACGGGAGGGCGAACCTGACAGCGTGCCAGGGGGA
GAGGGGCAACGACGCGGACGACGAGGCGGACCTGGCGAACTTCGTCGCGT
GGGGGCTGACCAAGGCCCCCCGCGGGCGACCCTCCATGGAGCAGGTGCTG
CAGCACCCCTGGCTGACCAAGGCCGCCGCCCTCCAGCACAGCGACTGCTC
CCTCGCCCGAGGGTGCAGCAGCCCGGGCCGGCAGGAGCCTGAGGGCGGGT
CGTCCCCGGCATCGAGCTCGCAGACATGCTAG
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