mRNA_2905 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|347172 vs. uniprot
Match: A0A835YLD5_9STRA (Rec8 like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLD5_9STRA) HSP 1 Score: 1279 bits (3310), Expect = 0.000e+0 Identity = 708/708 (100.00%), Postives = 708/708 (100.00%), Query Frame = 1 Query: 1 MFYSSTILSKKGPLGKIWLAAHYDKKLTKNQIYAMDITESVDSIVHPNVPLALRVSGHLLLGVVRIYSRKVQYLLSDCSEAQVKMKMAFRPGVVDLPTGASEAPAAAINMPGWGEFDLTLSGGDDYGGFFGGGRMSMPLADTWMAAAAMTVARPQVTVAQPQDITLSDPESLALLGSARRSSGGFGDGWMDVSGGPGSAAGSARKGDSRVSDIEQLRDGSVDGSALRRAQRPSIDLGGRPSTAGFGDLDTERYDDLGEGMPTLPAEFLEEEGGAAAADLGDGYGGYDYEPEPLAQDESAVLGGAPVRMSFAGESDMEVSRREGEELEGGDLGPGELPADFDEMPQEPEAEGMSKVERARAEXXXXXXXDMEEGAEAGKKRGAPPGKQKRGAKKRRAIQLDQRAAMDRKEFRAMGLAAEQTLRERRYPLAPPPQRAAPAFVAEQLSEPLMAGLAPELMELLSWTMQPGPVPLRLLRIKEREAPPPTPPREGAPDETMEDIEVTRREAEGLRSAGRPSIGVSRLDVSGAGEGVLPGEEQHDFDFGGGGGEEFLQEEGMDMGGPEYDPPMEEQPLAEEEGALGAVDDLDYLREGEEERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXASTRPTAIMLRLLRKHVDGGGGAAAYGDIARGAKRGANRRRNIAAGFFQLLQLKTWDFVELTQGEPFGDITITAGPRFEEEVPQ 2124 MFYSSTILSKKGPLGKIWLAAHYDKKLTKNQIYAMDITESVDSIVHPNVPLALRVSGHLLLGVVRIYSRKVQYLLSDCSEAQVKMKMAFRPGVVDLPTGASEAPAAAINMPGWGEFDLTLSGGDDYGGFFGGGRMSMPLADTWMAAAAMTVARPQVTVAQPQDITLSDPESLALLGSARRSSGGFGDGWMDVSGGPGSAAGSARKGDSRVSDIEQLRDGSVDGSALRRAQRPSIDLGGRPSTAGFGDLDTERYDDLGEGMPTLPAEFLEEEGGAAAADLGDGYGGYDYEPEPLAQDESAVLGGAPVRMSFAGESDMEVSRREGEELEGGDLGPGELPADFDEMPQEPEAEGMSKVERARAEXXXXXXXDMEEGAEAGKKRGAPPGKQKRGAKKRRAIQLDQRAAMDRKEFRAMGLAAEQTLRERRYPLAPPPQRAAPAFVAEQLSEPLMAGLAPELMELLSWTMQPGPVPLRLLRIKEREAPPPTPPREGAPDETMEDIEVTRREAEGLRSAGRPSIGVSRLDVSGAGEGVLPGEEQHDFDFGGGGGEEFLQEEGMDMGGPEYDPPMEEQPLAEEEGALGAVDDLDYLREGEEERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXASTRPTAIMLRLLRKHVDGGGGAAAYGDIARGAKRGANRRRNIAAGFFQLLQLKTWDFVELTQGEPFGDITITAGPRFEEEVPQ Sbjct: 1 MFYSSTILSKKGPLGKIWLAAHYDKKLTKNQIYAMDITESVDSIVHPNVPLALRVSGHLLLGVVRIYSRKVQYLLSDCSEAQVKMKMAFRPGVVDLPTGASEAPAAAINMPGWGEFDLTLSGGDDYGGFFGGGRMSMPLADTWMAAAAMTVARPQVTVAQPQDITLSDPESLALLGSARRSSGGFGDGWMDVSGGPGSAAGSARKGDSRVSDIEQLRDGSVDGSALRRAQRPSIDLGGRPSTAGFGDLDTERYDDLGEGMPTLPAEFLEEEGGAAAADLGDGYGGYDYEPEPLAQDESAVLGGAPVRMSFAGESDMEVSRREGEELEGGDLGPGELPADFDEMPQEPEAEGMSKVERARAEXXXXXXXDMEEGAEAGKKRGAPPGKQKRGAKKRRAIQLDQRAAMDRKEFRAMGLAAEQTLRERRYPLAPPPQRAAPAFVAEQLSEPLMAGLAPELMELLSWTMQPGPVPLRLLRIKEREAPPPTPPREGAPDETMEDIEVTRREAEGLRSAGRPSIGVSRLDVSGAGEGVLPGEEQHDFDFGGGGGEEFLQEEGMDMGGPEYDPPMEEQPLAEEEGALGAVDDLDYLREGEEERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXASTRPTAIMLRLLRKHVDGGGGAAAYGDIARGAKRGANRRRNIAAGFFQLLQLKTWDFVELTQGEPFGDITITAGPRFEEEVPQ 708
BLAST of jgi.p|Trimin1|347172 vs. uniprot
Match: A0A7S2S5L9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S5L9_9STRA) HSP 1 Score: 221 bits (563), Expect = 1.990e-58 Identity = 239/748 (31.95%), Postives = 325/748 (43.45%), Query Frame = 1 Query: 1 MFYSSTILSKKGPLGKIWLAAHYDKKLTKNQIYAMDITESVDSIVHPNVPLALRVSGHLLLGVVRIYSRKVQYLLSDCSEAQVKMKMAFRPGVVDLPTGASEAPAAAINMPGWGEFDLTLSGGDDYGGFFGGGRMSMPLADTWMAAAAMTVARPQVTVAQPQDITLSDPE----SLALLGSARRSSG------------------GFGDGWMDVSGGPGSAAGSARKGDSRVSDIEQLRDGSVDGSALRRAQRPSIDLGGRPSTAGFGDLDTERYDDLGEGMPTLPAEFLEEEGGAAAADLGDGYGGYDYEPEPLAQDESAVLGGAPVRMSFAGESDMEVSRREGEELEGGDLGPGELPADFDEMPQEPEAEGMSKVERARAEXXXXXXXDMEEGAEAGKKRGAPPGKQKRGAKKRRAIQ--LDQRAAMDRKEFRAMGLAAEQTLRERRYPLAPPPQRAAPA-----FVAEQLSEPLMAGLAPELMELLSWTMQPGPVPLRLLRIKEREAPPPTPPREG----APDETMEDIE-VTRREAEGLRSAGRPSIGVSRLDVSGAGE----GVLPGEEQHDFDFGGGGGEEFLQEEGMDM-GGPEYDPPMEEQPLAEEEGA--LGAVDDLDYLREGEEERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXASTRPTAIMLRLLRKHVDGGGGAAAYGDIARGAKRGANRRRNIAAGFFQLLQLKTWDFVELTQGEPFGDITITAGPRFEEEVP 2121 MFYS IL+KKGPLGKIWLAAH+DKKLTK QI+ DI SVDSIV+P+VPLALRVSGHLLLGVVRIYSRKV+YL++DC+EA VK+K+AFRPG VDLP +E ++AIN+ + EFD+ L + +P ++ WMAAA+ T+AR QDITL+D E L+L R +G G GD D GG A D++V IE + G D S R R + LG S D PA LEE+ GA L D GGA + G+ ++ +G ++G PA Q P P + K+ K+R I + + ++ R G L PP QRA A + E++++P LAPEL+E+ SWTM+ +P L R EA P RE AP++T++DIE + E S + +G D++ + + P EE FD E+ D+ G PE + + + + GA LGAV+ EE+ A +TR M+ +H G Y +A + R A FF+LLQLKTWD++EL QGE +GDIT++ G +F+ VP Sbjct: 1 MFYSQIILAKKGPLGKIWLAAHWDKKLTKVQIFQTDIERSVDSIVNPSVPLALRVSGHLLLGVVRIYSRKVKYLMNDCTEALVKIKLAFRPGAVDLPEDQAEGASSAINVANFEEFDMQLDLAMPFT------LEHLPASEQWMAAASQTMAR-------RQDITLADAEVTASQLSLPSLRTRGAGDAEEWGEEFDPRDERANIGLGDELDDNLGG-------ALDPDAQVDSIEDIEVGRRDSSIQSRGSR-GLSLGQDLSKFSVDSAD--------------PAPTLEEDFGADLEPLPXXXXXXXXXXXXXXXDPMDTDGGAAMAFDPEGDLSFGMASEDGAAVDG-------APAHPSPSTQPP-----------------------------------PVARPKKNRKRRLLIDGATELAGSQIKENLRDTGDIVRVFL--------PPRQRARGAEERLPALEERMAQPNHRNLAPELLEMFSWTMRANDMPFAL-REGWTEAGPTASGRESIAEAAPEDTVDDIEQALGHDEEPGPSFAQDVVGFPEEDLAFPEDENAMDLPPDEEPEPFD---------PAEDYNDLPGAPESPLRLGDSVITRDSGAFRLGAVNAF-----AEEDTAEGGALDTGRAEEGGGAGGAGHWHP-----NTREVMNMVERALQH----NGEVRYNKMAHVGTKKQVDRLTAANTFFELLQLKTWDYIELGQGEAYGDITVSKGRKFDLGVP 639
BLAST of jgi.p|Trimin1|347172 vs. uniprot
Match: A0A7S3YM80_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YM80_HETAK) HSP 1 Score: 205 bits (522), Expect = 3.440e-57 Identity = 110/177 (62.15%), Postives = 131/177 (74.01%), Query Frame = 1 Query: 1 MFYSSTILSKKGPLGKIWLAAHYDKKLTKNQIYAMDITESVDSIVHPNVPLALRVSGHLLLGVVRIYSRKVQYLLSDCSEAQVKMKMAFRPGVVDLPTGASEAPAAAINMPGWGEFDLTLSGGDDYGGFFGGGRMSMPL-------ADTWMAAAAMTVARPQVTVAQPQDITLSDPE 510 MFYS IL+KKGPLGK+WLAAH+DKKLTK QI++ DI ES DSIV+P VPLALRVSGHLLLG+ RIYSRKV+YL++DCSEA VK+KMAFRPGVVDLP+GASEAPAAAIN+ +GEFD+ + M+MPL AD WMAAA+ T+ R QDIT+ D + Sbjct: 3 MFYSQYILAKKGPLGKVWLAAHWDKKLTKIQIFSTDIVESADSIVNPTVPLALRVSGHLLLGLTRIYSRKVKYLMTDCSEALVKIKMAFRPGVVDLPSGASEAPAAAINVANFGEFDMYMD-------------MAMPLSFDDIPAADQWMAAASQTITR-------RQDITMPDSQ 159
BLAST of jgi.p|Trimin1|347172 vs. uniprot
Match: A0A4D9CUA7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUA7_9STRA) HSP 1 Score: 204 bits (518), Expect = 1.010e-51 Identity = 106/179 (59.22%), Postives = 132/179 (73.74%), Query Frame = 1 Query: 1 MFYSSTILSKKGPLGKIWLAAHYDKKLTKNQIYAMDITESVDSIVHPNVPLALRVSGHLLLGVVRIYSRKVQYLLSDCSEAQVKMKMAFRPGVVDLPTGASEAPAAAINMPGWGEFDLTLSGGDDYGGF-----------FGGGRM------SMPLADTWMAAAAMTVARPQVTVAQPQ 486 MF++S++L+KKGPLGK+WLAAH+DKKLTK Q++ DIT+SVDSIVHP VPLALRVSGHLLLGVVRIYSRKV+YL+ DCS+A K+KMAFRPG+VDLPTGASEAP AAIN+ +G+FD D+ GF FGGG ++P+AD W+ AA T+AR + Q + Sbjct: 1 MFFASSLLTKKGPLGKVWLAAHWDKKLTKMQVFQTDITKSVDSIVHPTVPLALRVSGHLLLGVVRIYSRKVKYLMEDCSQALTKIKMAFRPGIVDLPTGASEAPLAAINVQNFGQFDQDFL---DFAGFQGRTEKGRDGLFGGGLGGRPDLDTLPMADQWVTAATQTLARRETITLQDE 176
BLAST of jgi.p|Trimin1|347172 vs. uniprot
Match: A0A5D6XFG6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XFG6_9STRA) HSP 1 Score: 207 bits (527), Expect = 1.490e-51 Identity = 238/735 (32.38%), Postives = 311/735 (42.31%), Query Frame = 1 Query: 1 MFYSSTILSKKGPLGKIWLAAHYDKKLTKNQIYAMDITESVDSIVHPNVPLALRVSGHLLLGVVRIYSRKVQYLLSDCSEAQVKMKMAFRPGVVDLPTGASEAPAAAINMPGWGEFDLTLSGGDDYGGFFGGGRMSMPLADTWMAAAAMTVARPQVTVAQPQDITLSDPESLALLGSARRSSGGFGDGWMDVSGGPGSAAGSA-----------RKG---DSRVSDIEQLRDGSVDGSALRRAQRPSIDLGGRPSTAGFGDLDTERYDDLGEGMPTLPAEFLEEEGGAAAADLGDGYGGYDYEPEPLAQDESAVLGGAPVRMSFAGESDMEVSRREGEELEGGDLGPGELPADFDEMPQEPEAEGMSKVERARAEXXXXXXXDMEEGAEAGKKRGAPPGKQKRGAKKRRAIQLDQRAAMDRKEFRAMGLAAEQTLRERRYPLAPPPQR------AAPAFVAEQLSEPLMAGLAPELMELLSWTMQPGPVPLRLLRIKEREAPPPTPPREGAPDETMEDIEVTRREA-----EGLRSAGRPSIGVSRLDVSGAGEGVLPGEEQ-HDFDFGGGGGEEFLQEEGMDMGGP-EYDPPMEEQPLAEEEGALGAVDDLD-YLREGEEERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXASTRPTAIMLRLLRKHVDGGGGAAAYGDIARGAKRGANRRRNIAAGFFQLLQLKTWDFVELTQGEPFGDITITAGPRFEEEVP 2121 MFYS +L+KKGPLGKIWLAAH+DKKL K QI+ D+ SV SIV+P VPLALRVSGHLLLGVVRIYSRKV+YL +DCSEA VK+K+AFRPGVVDLP +A A AIN+ +GEFDL L+ D +S P D W+AA++ T AR QDITL+DP +L A FGD D G S G A R+G S VSD+E RD S A PS+D G G LD D+ G P ++ G AA + D + + +P S SD+ VS +RA + E+ A + + KK+R I D + E + +R R P A A+ +P G++ L+ + S+TM+ P I E +A GA E +D+E TRR + E R + P G S LD S E EE H +F E + D+G P EY P EE + L AV+DL + E +E+ A T +L++LR ++ Y + + + RR AA FF+LLQLKT D+V+L Q P+GDI I RF E VP Sbjct: 1 MFYSQIVLAKKGPLGKIWLAAHWDKKLNKQQIFTADLQSSVASIVNPQVPLALRVSGHLLLGVVRIYSRKVKYLYADCSEALVKIKLAFRPGVVDLPAATQQASAHAINVSSFGEFDLELTYSID--------AISTPSLDEWIAASSQTAAR-------RQDITLADPLRRSLGDDA------FGD--RDGFGAEDSFGGGAWQAFDLDDAPDREGVLDASTVSDVEIARDAS--------AVLPSLDESGL-----VGALDKSVADESAFGGEDPPDVVFNDDYGDAALEF----------------DPALEVPPSPASNSLDISSDLNVSINN----------------------------------NSRASLDVALANEDEDAAASLR------------PKKKRRIGRDSVTELSSAELKKGMTDVSDIVRVRDMSFRKPGSAGTGIASAVAVSGADLFGKPCNVGISEALLGMFSYTMKKRKFPF----IPEDDA--------GAEAEKSDDVEQTRRMSANSALENRRDSILPEYG-SELDDSLLEEKSFQVEENNHALEF------EAPEHPDYDLGAPTEY--PDEELEDLNVDIELAAVNDLQGNIDETIDEQQANYSTAQHKWHPH--------------------TVKVLKVLRVSLENKD-EVTYKQLTKNTQS----RRTAAALFFELLQLKTLDYVDLDQSRPYGDIKIAKATRFAETVP 591
BLAST of jgi.p|Trimin1|347172 vs. uniprot
Match: K3W5D2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W5D2_GLOUD) HSP 1 Score: 197 bits (500), Expect = 3.070e-50 Identity = 223/729 (30.59%), Postives = 312/729 (42.80%), Query Frame = 1 Query: 1 MFYSSTILSKKGPLGKIWLAAHYDKKLTKNQIYAMDITESVDSIVHPNVPLALRVSGHLLLGVVRIYSRKVQYLLSDCSEAQVKMKMAFRPGVVDLPTGASEAPAAAINMPGWGEFDLTLSGGDDYGGFFGGGRMSMPLADTWMAAAAMTVARPQVTVAQPQDITLSDP-------ESLALLGSARRSSGGFGDGWM-----DVSGGPGSAAGSARKGDSRVSDIEQLRDGSVDGSALRRAQRPSIDLGGRPSTAGFGDLDTERYDDLGEGMPTLPAEFLEEEGGAAAADLGDGYGGYDYEPEPLAQDESAVLGGAPVRMSFAGESDMEVSRREGEELEGGDLGPGELPADFDEMPQEPEAEGMSKVERARAEXXXXXXXDMEEGAEAGKKRGAPPGKQKRGAKKRRAIQLDQRAAMDRKEFRAMGLAAEQTLRERRYPLAPPPQRAAPAFVAEQLSEPLMAGLAPELMELLSWTMQPGPVPLRLLRIKEREAPPPTPPREGAPDETMEDIEVTRR-EAEGLRSAGRPSIGVSRLDVSGAGEGVLPGEEQHD---FDFGGGGGEEFLQEEGMDMGG---PEYDPPMEEQPLAEEEGALGAVDDLDYLREGEEERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXASTR---PTAIMLRLLRKHVDGGGGAAAYGDIARGAKRGANRRRNIAAGFFQLLQLKTWDFVELTQGEPFGDITITAGPRFEEEVP 2121 MFYS IL+KKGPLGKIWLAAH+DKKL K QI+ DI SVDSIV+P VPLALRVSGHLLLGVVRIYSRKV+YL SDCSEA VK+K+AFRPGVVDLP +A A AIN+ +GEFD+ L+ D +S P D W+ A++ T AR QDITL+DP E + G S G GD W D++ G S VSD+E RD S A P +D G + +D ++ G G P +E G A D + G+D P P + S +D+ S ++ RA + EE A+ + KK+R I D + F G+ + R P + + E ++P M ++ EL+ + ++TM+ K+R+ P + + A D+ E++E TRR A ++ GR S +SG + +L + H+ FD G G+D+ P+YD LGA + +Y E E+ A + T ++++LR+ + Y + + + RR AA FF+LLQLKT ++V++ Q P+GDI IT RF E +P Sbjct: 1 MFYSQIILAKKGPLGKIWLAAHWDKKLNKQQIFTADIQSSVDSIVNPQVPLALRVSGHLLLGVVRIYSRKVKYLFSDCSEALVKIKLAFRPGVVDLPANNQQASAHAINVSNFGEFDVELTYSID--------AISAPSLDEWINASSQTTAR-------RQDITLADPLQRVQEDELVERDGFGVEDSFGGGD-WQAFDLDDMADKEGVLNAS------NVSDVEVARDAS--------AVLPQLDESGLMNA-----MDKSNAEESGFGDAFQPDLAFNDEYGDMAPDALEIDNGFDVPPSPASN-------------SLDISTDLNAS--------------------------------INSTSRASLDFALAD----EEQAQTVR------------PKKKRKIGRDSVTELS-SAFLKKGMTDTSDITRTRDVAYRKPSSLSVSVGPELFAKPCMLNMSDELLGMFTYTMK-----------KKRKFPFVSEENDEA-DKADEEVEQTRRLSALSMQDGGRGS------SISGY-DSILDDADHHNDKSFDLG-------ESHRGLDIEETEFPDYD--------------LGAPMEPEYPEEELEDLNVDIELAAVNDLQGNMDDSMNDQHVGISTAQHKWHPHTVKVMKVLRQSLHDKS-EVTYKQLTKNTQN----RRTAAALFFELLQLKTLNYVDVDQSRPYGDIKITKATRFSETIP 587
BLAST of jgi.p|Trimin1|347172 vs. uniprot
Match: A0A8K1FQI0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FQI0_PYTOL) HSP 1 Score: 194 bits (492), Expect = 3.830e-49 Identity = 131/273 (47.99%), Postives = 163/273 (59.71%), Query Frame = 1 Query: 1 MFYSSTILSKKGPLGKIWLAAHYDKKLTKNQIYAMDITESVDSIVHPNVPLALRVSGHLLLGVVRIYSRKVQYLLSDCSEAQVKMKMAFRPGVVDLPTGASEAPAAAINMPGWGEFDLTLSGGDDYGGFFGGGRMSMPLADTWMAAAAMTVARPQ-VTVAQPQDITLSDPESLALLGSARRSSGGFGDGW----MDVSGGPGSAAGSARKGDSRVSDIEQLRDGS------VDGSALRR---AQRPSIDLGGRPSTAGFGDLDT---ERYDDL 768 MFYS +L+KKGPLGKIWLAAH+DKKL K QI+ DI SVDSIV+P VPLALRVSGHLLLGVVRIYSRKV+YL SDCSEA VK+K+AFRPGVVDLP +A A AIN+ +GEF+ L+ D ++ P D W+ A++ TVAR Q +T+A+P + + E G S G G+ W ++ GG G A R S VS+IE RD +D S + R + +D G +P GF D YDDL Sbjct: 1 MFYSQIVLAKKGPLGKIWLAAHWDKKLNKQQIFTADIQSSVDSIVNPQVPLALRVSGHLLLGVVRIYSRKVKYLFSDCSEALVKIKLAFRPGVVDLPVNNQQASAHAINVSNFGEFEAELTYSID--------AITAPSLDEWITASSQTVARRQDITLAEPLERVQEEDELAERDGFGFEDSFGGGE-WQAFDLEADGGFGDAG---RFSTSFVSEIEVGRDADTSIAPVLDDSLITRRFDGDKSIMDDGSQP---GFEQPDLAFDNAYDDL 258
BLAST of jgi.p|Trimin1|347172 vs. uniprot
Match: H3GTZ6_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GTZ6_PHYRM) HSP 1 Score: 190 bits (483), Expect = 5.840e-48 Identity = 227/736 (30.84%), Postives = 316/736 (42.93%), Query Frame = 1 Query: 1 MFYSSTILSKKGPLGKIWLAAHYDKKLTKNQIYAMDITESVDSIVHPNVPLALRVSGHLLLGVVRIYSRKVQYLLSDCSEAQVKMKMAFRPGVVDLPTGASEAPAAAINMPGWGEFDLTLSGGDDYGGFFGGGRMSMPLADTWMAAAAMTVARPQ-VTVAQPQDITLSDPESLALLGSARRSSGGFGDGWM--DVSGGPGSAAGSARKGDSRVSDIEQLRDGS-----VDGSAL-----RRAQRPSIDLGGRPSTAGFGDLDTERYDDLGEGMPTLPAEFLEEEGGAAAADLGDGYGGYDYEPEPLAQDESAVLGGAPVRMSFAGESDMEVSRREGEELEGGDLGPGELPADFDEMPQEPEAEGMSKVERARAEXXXXXXXDMEEGAEAGKKRGAPPGKQKRGAKKRRAIQLDQRAAMDRKEFR-AMGLAAEQTLRERRYPLAPPPQRAAPAFVAEQLSEPLMAGLAPELMELLSWTMQPGPVPLRLLRIKEREAPPPTPPREGAPDETM---EDIEVTRREAEGLRSAGRPSIGVSRLDVSGAGEGVLPGEEQHDFDFGGGGGEEFL-----QEEGMDMGGPEYD-----PPMEEQPLAE--EEGALGAVDDLDYLREGEEERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXASTRPTAIMLRLLRKHVDGGGGAAAYGDIARGAKRGANRRRNIAAGFFQLLQLKTWDFVELTQGEPFGDITITAGPRFEEEVP 2121 MFYS IL+KKGPLGKIWLAAH+DKKL K QI+ DI SV IV+P VPLALRVSGHLLLGVVRIYSRKV+YL +DCSEA VK+K+AFRPGVVDLP +A A+AIN+ +GEF+ ++ D +++P D W+AA++ T+AR Q +T+A P D + S G G W D+ GS+ S VSDIE R+ +D SA+ + R S+ +G GF D E MP P + +E E A ++S + GA + +S +D+ VS G + A D A +VE +R KK+R I D + + MG ++ T P + A A+ S P M ++ EL+ + TM+ P G+ D T+ EDIE+TRR + + R S + LDV+ G HD + G EF Q E D G P+Y+ P E+Q L + + LGAV+D+ +G E T ++++LRK ++ Y + + + RR AA FF+LLQLKT D+V++ Q P+ DI I+ RF E +P Sbjct: 1 MFYSQIILAKKGPLGKIWLAAHWDKKLNKQQIFTADIHSSVQDIVNPQVPLALRVSGHLLLGVVRIYSRKVKYLYADCSEALVKIKLAFRPGVVDLPQANQQAAASAINVSNFGEFEAEVTYTID--------ALAVPSLDEWIAASSQTMARRQDITLADPLDRIREENAFAERDAIVMEDSFGEGGNWQAFDLD----DNFGSSGLDMSAVSDIEVAREADAPMLPMDDSAIVNDGEKSMDRSSLVVGEEQPEFGFNDAPFE--------MP--PDDAMEIENPA---------------------EDSMNISGAMLDIS----ADLNVSLN------------GSMRASLDA------ALANVEVETSRP-------------------------------KKKRKIAHDTVTELTSSYLKQGMGDTSDITRTSGIVYFKKPGSKRDFAG-ADMFSRPCMVNMSEELLSMFKITMKKRKFPF------------------GSRDRTVNQPEDIELTRR----MSANSRLSTNSAGLDVT---TGSCDASMMHDIEEGN--HFEFADMGPTQAEREDEGFPDYEIGAPFEPEEQQDLEDLNVDLELGAVNDIRGDADGVTEVGQDASTAQHKWHPH--------------------TVKVMKVLRKSLNDKE-EVTYKQLT----KKTHDRRTAAALFFELLQLKTLDYVDVDQTAPYSDIKISKAARFSEYIP 587
BLAST of jgi.p|Trimin1|347172 vs. uniprot
Match: D7G3D1_ECTSI (Rad21_Rec8_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G3D1_ECTSI) HSP 1 Score: 190 bits (483), Expect = 2.370e-47 Identity = 192/502 (38.25%), Postives = 253/502 (50.40%), Query Frame = 1 Query: 1 MFYSSTILSKKGPLGKIWLAAHYDKKLTKNQIYAMDITESVDSIVHPNVPLALRVSGHLLLGVVRIYSRKVQYLLSDCSEAQVKMKMAFRPGVVDLPTGASEAPAAAINMPGWGEFD-LTLSGG--DDYGGFFGGGRMSMPLADTWMAAAAMTVARPQVTVAQPQDITLSDP-ESLALL-GSARRSSGGFGDGWMDVS--GGPGSA---AGSARKGD-------SRVSDIEQLRDGSVDGSALRRAQRP-SIDLGGRPSTAGFGDLDTERYDDLGEGMPTLPAEFLEEEGG------AAAADLG-DGYGGYDYEPEPLAQDESAVLGGAPVRMSFAGESDMEVSRREGEELEGGDLGPGELPADFDEMPQEPEAEGMSKVERARAEXXXXXXXDMEEGAEAGKKRGAPPGKQKRGAKKRRAIQLDQRAAMDRKEFRAMGLAAEQTLRERRYPLAPPPQRAAPAFVA--EQLSEPLMAGLAPELMELLSWTMQPG--PVPLRL 1419 MFYS IL+KKGPLGKIW+AAH+DKKL K QI+ +I SV++I+ P VPLALR+SGHLLLG+VRIYSRKV+YL+SD SEA VK++MAFRPG D+PTGA+ A AI G+GEFD L + G D + F D WM A +AR DITL+DP E+++ + G R S G+ MD S GG G+ AGS + SRVSDIE +RDG D S LR S+D+ A G +D YDDLG PT P E + GG A D G DG G+D EPE A E + ++ G+ EG ++ PG + D D + + + G S+ E D +G ++ P ++R + LDQ +D +A R+R P+R A + EQL+ PLM LAP + ++L M PG P P+RL Sbjct: 1 MFYSQIILAKKGPLGKIWIAAHWDKKLNKAQIFQTNINTSVENILQPTVPLALRMSGHLLLGLVRIYSRKVKYLMSDASEALVKIQMAFRPGATDMPTGATVAAPGAIEAQGFGEFDELGMDGVHVDVFSNAFA--------VDNWMEEAPANLAR-------RTDITLTDPAENMSSISGQDRNGSFMLGESSMDFSPFGGGGAXXXXAGSESRMSMDRSSRVSRVSDIEAVRDG--DNSRLRSGHLSMSMDV----MAADEGQMDGG-YDDLG--PPTHPNELADIGGGRELDDAAEMMDFGNDGGDGFD-EPEVDAP-----------------EFNPDMEEHLGQGGEGEEVLPGAVQLDDDTL--DFDDAGFSRSELPPV-GGAEAAVDQSDGEPQEEEDHEPKVXXXXTRXRKRKLVLDQVTLIDMATMKAQLQDTSDITRKRWRG----PRRIVQASLTPEEQLAAPLMPWLAPPIQDMLRACMHPGGFPFPVRL 453
BLAST of jgi.p|Trimin1|347172 vs. uniprot
Match: A0A6A3TN23_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TN23_9STRA) HSP 1 Score: 188 bits (478), Expect = 2.580e-47 Identity = 100/169 (59.17%), Postives = 124/169 (73.37%), Query Frame = 1 Query: 1 MFYSSTILSKKGPLGKIWLAAHYDKKLTKNQIYAMDITESVDSIVHPNVPLALRVSGHLLLGVVRIYSRKVQYLLSDCSEAQVKMKMAFRPGVVDLPTGASEAPAAAINMPGWGEFDLTLSGGDDYGGFFGGGRMSMPLADTWMAAAAMTVARPQVTVAQPQDITLSDP 507 MFYS IL+KKGPLGKIWLAAH+DKKL K QI+ DI SV SIV+P VPLALRVSGHLLLGVVRIYSRKV+YL +DCSEA VK+K+AFRPGVVDLP + +A + AIN+ +GEF+ ++ + +++P D W+AA++ TVAR QDITL+DP Sbjct: 1 MFYSQIILAKKGPLGKIWLAAHWDKKLNKQQIFTADIHSSVQSIVNPQVPLALRVSGHLLLGVVRIYSRKVKYLYADCSEALVKIKLAFRPGVVDLPAASQQAASHAINVSNFGEFEAEVTYSIE--------AITVPSLDEWVAASSQTVAR-------RQDITLADP 154 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347172 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_2905 ID=mRNA_2905|Name=jgi.p|Trimin1|347172|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2558bp|location=Sequence derived from alignment at Contig_8:1838606..1848899+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTTCTATTCCAGTACTATCCTCTCGAAGAAGGGGCCTCTGGGGAAAATback to top protein sequence of jgi.p|Trimin1|347172 >Trimin1|347172|estExt_Genemark1.C_Ctg_80217 ID=Trimin1|347172|estExt_Genemark1.C_Ctg_80217|Name=jgi.p|Trimin1|347172|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=709bp MFYSSTILSKKGPLGKIWLAAHYDKKLTKNQIYAMDITESVDSIVHPNVPback to top mRNA from alignment at Contig_8:1838606..1848899+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_2905 ID=mRNA_2905|Name=jgi.p|Trimin1|347172|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=10294bp|location=Sequence derived from alignment at Contig_8:1838606..1848899+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_8:1838606..1848899+ >mRNA_2905 ID=mRNA_2905|Name=jgi.p|Trimin1|347172|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2127bp|location=Sequence derived from alignment at Contig_8:1838606..1848899+ (Tribonema minus UTEX_B_3156 )back to top |