mRNA_2887 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|159087 vs. uniprot
Match: A0A836C9S8_9STRA (GPN-loop GTPase 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9S8_9STRA) HSP 1 Score: 681 bits (1756), Expect = 3.410e-247 Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 1
Query: 1 MADDGGEEDQLPCFGQIVVGPPGSGKTTFCHGMSQYLTALGREVAIINLDPANHGERLPYKPAVDIEDLVSLEGVMSTLGLGPNGAIIYSIEFLEKNLDWLLDKLRAHRAKYLLFDFPGQAGVELFTHYTCIQNIVQTLQKHDYRLTAVHLVDAYHCSDASRFISVVLVSLMSMMRLELPHVNVLSKVDLIEQYGPLAFNLDFFTECTDMTRILDYIDAPARGADELDRDLQGAHERPQGDATSKKLSRLTREICDVVESFGLVSFTTLDIQDGESVGRVLSKIDKANGYVVQSAAAAAAAQQGRDPRAAANALFQSAFSGNEADYEHLASVRERHMGRTSGDDT 1035
MADDGGEEDQLPCFGQIVVGPPGSGKTTFCHGMSQYLTALGREVAIINLDPANHGERLPYKPAVDIEDLVSLEGVMSTLGLGPNGAIIYSIEFLEKNLDWLLDKLRAHRAKYLLFDFPGQAGVELFTHYTCIQNIVQTLQKHDYRLTAVHLVDAYHCSDASRFISVVLVSLMSMMRLELPHVNVLSKVDLIEQYGPLAFNLDFFTECTDMTRILDYIDAPARGADELDRDLQGAHERPQGDATSKKLSRLTREICDVVESFGLVSFTTLDIQDGESVGRVLSKIDKANGYVVQSAAAAAAAQQGRDPRAAANALFQSAFSGNEADYEHLASVRERHMGRTSGDDT
Sbjct: 1 MADDGGEEDQLPCFGQIVVGPPGSGKTTFCHGMSQYLTALGREVAIINLDPANHGERLPYKPAVDIEDLVSLEGVMSTLGLGPNGAIIYSIEFLEKNLDWLLDKLRAHRAKYLLFDFPGQAGVELFTHYTCIQNIVQTLQKHDYRLTAVHLVDAYHCSDASRFISVVLVSLMSMMRLELPHVNVLSKVDLIEQYGPLAFNLDFFTECTDMTRILDYIDAPARGADELDRDLQGAHERPQGDATSKKLSRLTREICDVVESFGLVSFTTLDIQDGESVGRVLSKIDKANGYVVQSAAAAAAAQQGRDPRAAANALFQSAFSGNEADYEHLASVRERHMGRTSGDDT 345
BLAST of jgi.p|Trimin1|159087 vs. uniprot
Match: A0A6H5KRZ6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ6_9PHAE) HSP 1 Score: 334 bits (856), Expect = 1.050e-108 Identity = 201/439 (45.79%), Postives = 251/439 (57.18%), Query Frame = 1
Query: 40 FGQIVVGPPGSGKTTFCHGMSQYLTALGREVAIINLDPANHGERLPYKPAVDIEDLVSLEGVMSTLGLGPNGAIIYSIEFLEKNLDWLLDKLRAHRAKYLLFDFPGQAGVELFTHYTCIQNIVQTLQKHDYRLTAVHLVDAYHCSDASRFISVVLVSLMSMMRLELPHVNVLSKVDLIEQYGPLAFNLDFFTECTDMTRILDYIDAPARGAD---------------------ELDRDLQG--------------------AHERPQGDAT----------------------------------------------SKKLSRLTREICDVVESFGLVSFTTLDIQ----------------------DGESVGRVLSKIDKANGYVVQSAAAAAAAQQGRDPRAAANALFQSAFSG-NEADYEHLASVRERHMGRTSG 1026
FGQ+VVGPPGSGKTT+C GM QY+ A+GR+ A+INLDPANHGE LPY AVDI++LVS+EGVM LGPNGA++Y +E+LEKN+DWL++KL K+L+FDFPGQ VELFTH C+QN+VQ LQK D RL AVHLVDAYHC + S FIS L+SLM M+RLELPHVNVLSKVDLIEQ GPL FNL+FFTEC DM +L Y+DAP D + DRD G A ERP D T +++ ++T EICDVV+S+GLV F L+IQ D E+VGRVLS+IDK NGY++ + AA A + ++LF++AFS +E +E + SV+ER+M T G
Sbjct: 4 FGQVVVGPPGSGKTTYCLGMCQYMKAIGRDTAVINLDPANHGEGLPYAAAVDIQELVSVEGVMEEFNLGPNGAMLYCLEYLEKNVDWLMEKLDGLTQKHLIFDFPGQ--VELFTHCFCVQNLVQRLQKDDVRLAAVHLVDAYHCGNPSLFISAALLSLMVMLRLELPHVNVLSKVDLIEQMGPLPFNLEFFTECQDMRELLAYLDAPPDTGDSGETTIPGDGANGELNEVAGSDRDRDRGGETGTSGAEHGDRREGDEAPVAAERPASDRTDGSPPRDEGRGAXXXXXXXXXXXXXXASGNGPCLGGGSGGGRRRGRNERFYKMTEEICDVVDSYGLVCFYPLNIQXXXXXXXPRSSSAGHPCVNVKQDAETVGRVLSQIDKCNGYMLGAHDTAAPAAGAGAGEGSVSSLFRTAFSDTHEPMFEKVGSVQERYMPDTYG 440
BLAST of jgi.p|Trimin1|159087 vs. uniprot
Match: A0A8B8E2W6_CRAVI (GPN-loop GTPase 2 n=3 Tax=Crassostrea TaxID=6564 RepID=A0A8B8E2W6_CRAVI) HSP 1 Score: 311 bits (797), Expect = 4.900e-102 Identity = 164/330 (49.70%), Postives = 227/330 (68.79%), Query Frame = 1
Query: 40 FGQIVVGPPGSGKTTFCHGMSQYLTALGREVAIINLDPANHGERLPYKPAVDIEDLVSLEGVMSTLGLGPNGAIIYSIEFLEKNLDWLLDKLRAHRAKYLLFDFPGQAGVELFTHYTCIQNIVQTLQKHDYRLTAVHLVDAYHCSDASRFISVVLVSLMSMMRLELPHVNVLSKVDLIEQYGPLAFNLDFFTECTDMTRILDYIDAPARGADELDRDLQGAHERPQGDATSKKLSRLTREICDVVESFGLVSFTTLDIQDGESVGRVLSKIDKANGYVVQSAAAAAAAQQGRDPRAAANALFQSAFSGNEADYEHLASVRERHMGRTSGD 1029
FGQIV+GPPGSGKTT+CHGMS++L+A GREVA+INLDPAN + LPYK VDI L++L VM LGPNG +IY +E+LEKN+DWL ++L + KYLLFDFPGQ VEL+THY C++NI+ LQK DYRL +VHLVD+++CSDAS+FISV+L SL +M++LELPHVNVLSK DLIE++G L+FNLDF+T+ D+ +LD + +GD + +K +L + ++V+ + LVSF L+++D ES+ RV+ ++DKANGYV + RD ++ + Q+ F +YE + VRE++M +GD
Sbjct: 2 FGQIVIGPPGSGKTTYCHGMSEFLSAFGREVAVINLDPAN--DHLPYKCDVDISTLITLSDVMDATKLGPNGGLIYCMEYLEKNIDWLQNELGKLKNKYLLFDFPGQ--VELYTHYKCVRNILSQLQKWDYRLVSVHLVDSHYCSDASKFISVLLTSLSTMLQLELPHVNVLSKCDLIEKFGKLSFNLDFYTDVLDLGYLLDEL---------------------KGDKSLQKYKKLNSALVELVQDYSLVSFVPLNVEDKESMLRVMKQVDKANGYVFGDL-------EERDIQSMMSCAVQAEF-----EYEKIKDVREKYMDTDTGD 294
BLAST of jgi.p|Trimin1|159087 vs. uniprot
Match: A0A210QZ02_MIZYE (GPN-loop GTPase 2 n=2 Tax=Pectinidae TaxID=6566 RepID=A0A210QZ02_MIZYE) HSP 1 Score: 311 bits (797), Expect = 6.610e-102 Identity = 170/328 (51.83%), Postives = 222/328 (67.68%), Query Frame = 1
Query: 40 FGQIVVGPPGSGKTTFCHGMSQYLTALGREVAIINLDPANHGERLPYKPAVDIEDLVSLEGVMSTLGLGPNGAIIYSIEFLEKNLDWLLDKLRAHRAKYLLFDFPGQAGVELFTHYTCIQNIVQTLQKHDYRLTAVHLVDAYHCSDASRFISVVLVSLMSMMRLELPHVNVLSKVDLIEQYGPLAFNLDFFTECTDMTRILDYIDAPARGADELDRDLQGAHERPQGDATSKKLSRLTREICDVVESFGLVSFTTLDIQDGESVGRVLSKIDKANGYVVQSAAAAAAAQQGRDPRAAANALFQSAFSGNEADYEHLASVRERHMGRTS 1023
FGQ+V+GPPGSGKTT+C GMS++LT+LGREVA+INLDPAN E LP+K A+DI DLV LE VM L LGPNG +IY +E+LEKN+DWL +L KYLLFD PGQ VEL+TH+ ++NIV LQK DYRL AVHLVD+++CSDAS+FISV+L SL +M++LELPHVNVLSK DLI++YG L+FNLDF+TE D+T +LD + DA K +L + D++E + LVSF TLD+Q+ ES+ RV+ +DKANGY+ + RD ++ S G E +YE + VRE++M +S
Sbjct: 2 FGQVVIGPPGSGKTTYCLGMSEFLTSLGREVAVINLDPAN--EHLPFKCALDIADLVKLEDVMELLKLGPNGGLIYCMEYLEKNIDWLKKELEKIGNKYLLFDLPGQ--VELYTHHNSVRNIVTQLQKWDYRLVAVHLVDSHYCSDASKFISVLLTSLSTMLQLELPHVNVLSKCDLIQKYGKLSFNLDFYTEVLDLTYLLDQF---------------------KNDAQFHKYKKLNTALVDIIEEYSLVSFITLDVQEKESMLRVMKVVDKANGYLFGDL-------EERDLQS-----LMSCAVGAEFEYEKIKDVREKYMDVSS 292
BLAST of jgi.p|Trimin1|159087 vs. uniprot
Match: UPI001EB04A9B (GPN-loop GTPase 2-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EB04A9B) HSP 1 Score: 299 bits (765), Expect = 3.770e-97 Identity = 158/324 (48.77%), Postives = 215/324 (66.36%), Query Frame = 1
Query: 40 FGQIVVGPPGSGKTTFCHGMSQYLTALGREVAIINLDPANHGERLPYKPAVDIEDLVSLEGVMSTLGLGPNGAIIYSIEFLEKNLDWLLDKLRAHRAKYLLFDFPGQAGVELFTHYTCIQNIVQTLQKHDYRLTAVHLVDAYHCSDASRFISVVLVSLMSMMRLELPHVNVLSKVDLIEQYGPLAFNLDFFTECTDMTRILDYIDAPARGADELDRDLQGAHERPQGDATSKKLSRLTREICDVVESFGLVSFTTLDIQDGESVGRVLSKIDKANGYVVQSAAAAAAAQQGRDPRAAANALFQSAFSGNEADYEHLASVRERHM 1011
+GQ+V+GPPGSGKTT+C GMS++LT LGREVA++NLDPAN + LPYK AVDI DL++L VM L LGPNG +IY +E+LEKNLDWL ++L + Y+LFDFPGQ VEL+TH+ ++N++ LQK Y L AVHLVD+++C+DA +F+SV+L SL +M+++ELPHVNVLSK DLIE+YG LAFNLDF+TE D+ +L+++ Q D +K +L + V++ + LVSF L+IQD ESV RV+ +DKANGYV G +L A G E +Y+ + VRE++M
Sbjct: 3 WGQVVIGPPGSGKTTYCTGMSEFLTGLGREVAVVNLDPAN--DTLPYKCAVDISDLITLSDVMDNLKLGPNGGLIYCMEYLEKNLDWLKEQLEKVKVNYILFDFPGQ--VELYTHHNSVRNVLAELQKCGYNLVAVHLVDSHYCNDAGKFVSVLLTSLSTMLQMELPHVNVLSKADLIERYGKLAFNLDFYTEVLDLNFLLEHL---------------------QDDPVFQKYKKLNEALIGVIQDYSLVSFVMLNIQDKESVLRVMKSVDKANGYVF-----------GDTEERNIQSLLSCAV-GAEFEYDKIKDVREKYM 289
BLAST of jgi.p|Trimin1|159087 vs. uniprot
Match: A0A2B4SMR5_STYPI (GPN-loop GTPase 2 n=3 Tax=Scleractinia TaxID=6125 RepID=A0A2B4SMR5_STYPI) HSP 1 Score: 298 bits (764), Expect = 4.830e-97 Identity = 159/327 (48.62%), Postives = 219/327 (66.97%), Query Frame = 1
Query: 31 LPCFGQIVVGPPGSGKTTFCHGMSQYLTALGREVAIINLDPANHGERLPYKPAVDIEDLVSLEGVMSTLGLGPNGAIIYSIEFLEKNLDWLLDKLRAHRAKYLLFDFPGQAGVELFTHYTCIQNIVQTLQKHDYRLTAVHLVDAYHCSDASRFISVVLVSLMSMMRLELPHVNVLSKVDLIEQYGPLAFNLDFFTECTDMTRILDYIDAPARGADELDRDLQGAHERPQGDATSKKLSRLTREICDVVESFGLVSFTTLDIQDGESVGRVLSKIDKANGYVVQSAAAAAAAQQGRDPRAAANALFQSAFSGNEADYEHLASVRERHM 1011
+P FGQI++GPPGSGK+TFC GMS++LT LGR+VA++NLDPAN + L YK A+DI L++L+ VM L LGPNG +IY IE+LEKNLDWL KL+ + Y LFD PGQ VEL+TH+T ++N+V+ L+K D+RL AVHLVD++HCSD ++FISV+L SL +M+ +ELPHVNVLSK+DL+E YG LAFNLDF+T+ D+ +LD+I + D ++K +L + +VE +GLVSF TLDIQ ES+ +V ID+ANGY D R + L SA G + ++ A+++E++M
Sbjct: 1 MPSFGQIIIGPPGSGKSTFCAGMSEFLTNLGRKVAVVNLDPAN--DSLGYKCAIDISTLITLDDVMENLKLGPNGGLIYCIEYLEKNLDWLERKLKDLKGYYFLFDCPGQ--VELYTHHTSVRNVVRQLEKWDFRLAAVHLVDSHHCSDPTKFISVLLTSLSTMIHVELPHVNVLSKIDLVEHYGKLAFNLDFYTDVLDLNFLLDHI---------------------KDDPFTQKYKKLNEALVGLVEDYGLVSFKTLDIQSKESMHQVTKSIDQANGYAFGEL---------EDDRGNFSQLMSSAV-GTDFEFFRTAAIQEKYM 292
BLAST of jgi.p|Trimin1|159087 vs. uniprot
Match: UPI001B8892A6 (GPN-loop GTPase 2-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B8892A6) HSP 1 Score: 298 bits (762), Expect = 1.260e-96 Identity = 160/324 (49.38%), Postives = 215/324 (66.36%), Query Frame = 1
Query: 40 FGQIVVGPPGSGKTTFCHGMSQYLTALGREVAIINLDPANHGERLPYKPAVDIEDLVSLEGVMSTLGLGPNGAIIYSIEFLEKNLDWLLDKLRAHRAKYLLFDFPGQAGVELFTHYTCIQNIVQTLQKHDYRLTAVHLVDAYHCSDASRFISVVLVSLMSMMRLELPHVNVLSKVDLIEQYGPLAFNLDFFTECTDMTRILDYIDAPARGADELDRDLQGAHERPQGDATSKKLSRLTREICDVVESFGLVSFTTLDIQDGESVGRVLSKIDKANGYVVQSAAAAAAAQQGRDPRAAANALFQSAFSGNEADYEHLASVRERHM 1011
FGQ+V+GPPGSGKTT+C GMS +LT LGR+VA++NLDPAN + LPYK AVDI DL++L VM L LGPNG +IY +E+LEKNLDWL +L + KYLLFDFPGQ VEL+TH+ ++ ++Q L + D+RL AVHLVD+++C+D +FISV+L SL++M+++ELPHVNVLSK DLIE+YG LAFNLDF+TE D++ ILD + Q D +K +L + ++E++ LVSF L+IQD ESV RV IDKANG++ G A+ A G E +YE + +RE++M
Sbjct: 3 FGQVVIGPPGSGKTTYCAGMSDFLTGLGRDVAVVNLDPAN--DNLPYKCAVDISDLITLSDVMDNLKLGPNGGLIYCMEYLEKNLDWLQAQLEKVKDKYLLFDFPGQ--VELYTHHGSVKTMLQQLVRWDHRLVAVHLVDSHYCNDPGKFISVLLTSLLTMLQIELPHVNVLSKADLIEKYGKLAFNLDFYTEVLDLSYILDQL---------------------QDDKFLQKYKKLNEALIGIIENYSLVSFVALNIQDKESVLRVTRVIDKANGFIF-----------GDSEERNIQAMLSCAM-GAEFEYEKIKDIREKYM 289
BLAST of jgi.p|Trimin1|159087 vs. uniprot
Match: A0A8K1CAY4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAY4_PYTOL) HSP 1 Score: 298 bits (764), Expect = 1.910e-96 Identity = 150/297 (50.51%), Postives = 211/297 (71.04%), Query Frame = 1
Query: 40 FGQIVVGPPGSGKTTFCHGMSQYLTALGREVAIINLDPANHGERLPYKPAVDIEDLVSLEGVMSTLGLGPNGAIIYSIEFLEKNLDWLLDKLRAHRAKYLLFDFPGQAGVELFTHYTCIQNIVQTLQKHDYRLTAVHLVDAYHCSDASRFISVVLVSLMSMMRLELPHVNVLSKVDLIEQYGPLAFNLDFFTECTDMTRILDYIDAPARGADE----------------LDRDLQGAHERPQGDATSKKLSRLTREICDVVESFGLVSFTTLDIQDGESVGRVLSKIDKANGYVVQS 882
F Q+V+GPPGSGKTT+C+GM Q+L A GR+ ++N+DPAN E LPY+PA+DI D+V LE VM L LGPNG ++Y +++++ N DWL ++L+A KY+LFDFPGQ VEL+TH + + NI+ +QK +YR++ VHLVDA+HC+D+S+FISVVL+SL SM+RLELPH+NVLSK+DL++QYG LAFNLDF+T+ D+ +LD +D P+ ++ LD D + H R A +++ R+ + DVVE F LV+F L IQD ES+ +++ IDKANG+V S
Sbjct: 3 FAQMVLGPPGSGKTTYCNGMQQFLQANGRDAVVVNMDPAN--ENLPYEPAIDIADMVCLETVMEELELGPNGGLVYCMDYIDHNFDWLEERLQALEGKYVLFDFPGQ--VELYTHESSVYNILHKIQKLNYRISVVHLVDAHHCTDSSKFISVVLLSLSSMVRLELPHINVLSKIDLMQQYGKLAFNLDFYTDVLDLRYLLDRLDNPSLNLNDXXXXXXXXXGQVRRVQLDDD-ESPHSRRPPSALAERFRRMNEALIDVVEDFSLVNFQPLQIQDAESLQKLIQVIDKANGFVFSS 294
BLAST of jgi.p|Trimin1|159087 vs. uniprot
Match: A0A8B6GLJ9_MYTGA (GPN-loop GTPase 2 n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6GLJ9_MYTGA) HSP 1 Score: 297 bits (760), Expect = 2.620e-96 Identity = 159/324 (49.07%), Postives = 217/324 (66.98%), Query Frame = 1
Query: 40 FGQIVVGPPGSGKTTFCHGMSQYLTALGREVAIINLDPANHGERLPYKPAVDIEDLVSLEGVMSTLGLGPNGAIIYSIEFLEKNLDWLLDKLRAHRAKYLLFDFPGQAGVELFTHYTCIQNIVQTLQKHDYRLTAVHLVDAYHCSDASRFISVVLVSLMSMMRLELPHVNVLSKVDLIEQYGPLAFNLDFFTECTDMTRILDYIDAPARGADELDRDLQGAHERPQGDATSKKLSRLTREICDVVESFGLVSFTTLDIQDGESVGRVLSKIDKANGYVVQSAAAAAAAQQGRDPRAAANALFQSAFSGNEADYEHLASVRERHM 1011
FGQ+V+GPPG GKTT+CHGMSQ+LT LGREVA+INLDPAN + LPY A+DI DL++L VM TL LGPNG ++Y +E+LEKN+DW +L+ KYLLFDFPGQ VEL+TH+ ++N++Q LQK D RL AVHLVD+++CSD+S+FISV+L SL +M+++ELPHVNVLSK DLIE++G L+FNLDF+TE D+ +LD + +D+Q K +L + D++E + LVSF L +++ ES+ R+L ++DKANGYV G L A G E +YE + +RE++M
Sbjct: 5 FGQVVIGPPGCGKTTYCHGMSQFLTQLGREVAVINLDPAN--DSLPYNCALDISDLITLSDVMDTLKLGPNGGLLYCMEYLEKNIDWFEKELKKLEGKYLLFDFPGQ--VELYTHHNAVRNVLQKLQKWDCRLVAVHLVDSHYCSDSSKFISVLLTSLSTMLQIELPHVNVLSKCDLIEKFGKLSFNLDFYTEVLDLHYLLDDF--------KESQDVQ-------------KYKKLNSALIDIIEEYSLVSFVPLFVEEKESMLRMLKQVDKANGYVF-----------GDTEERNIQTLLSCAV-GAEFEYEKIKDIREKYM 291
BLAST of jgi.p|Trimin1|159087 vs. uniprot
Match: H3GAP0_PHYRM (GPN-loop GTPase 2 n=19 Tax=Peronosporaceae TaxID=4777 RepID=H3GAP0_PHYRM) HSP 1 Score: 296 bits (759), Expect = 3.590e-96 Identity = 145/278 (52.16%), Postives = 203/278 (73.02%), Query Frame = 1
Query: 40 FGQIVVGPPGSGKTTFCHGMSQYLTALGREVAIINLDPANHGERLPYKPAVDIEDLVSLEGVMSTLGLGPNGAIIYSIEFLEKNLDWLLDKLRAHRAKYLLFDFPGQAGVELFTHYTCIQNIVQTLQKHDYRLTAVHLVDAYHCSDASRFISVVLVSLMSMMRLELPHVNVLSKVDLIEQYGPLAFNLDFFTECTDMTRILDYIDAPARGADELDRDLQGAHERPQGDATSKKLSRLTREICDVVESFGLVSFTTLDIQDGESVGRVLSKIDKANGYV 873
F QIV+GPPGSGKTT+C+GM Q+L A GR+VA++N+DPAN E+LPY VD+ ++V LE VM L LGPNG ++Y +E+++ N DWL DKL A + KY+LFDFPGQ VEL+TH + +I+ LQK YRL VHLVDA+HC+D+++F+SVV++SL SM+RLELPH+NVLSK+DL++QYG LAFNLDF+T+ D+ +L+ +D P DE + L+ H +++ R+ + DV+E F LVSF L IQD ++ ++++ IDKANG+V
Sbjct: 3 FAQIVLGPPGSGKTTYCNGMQQFLQANGRDVAVVNMDPAN--EQLPYVADVDVSEMVCLENVMEELELGPNGGLVYCMEYIDLNFDWLEDKLAAFKGKYVLFDFPGQ--VELYTHEKSVHSILYKLQKLGYRLAVVHLVDAHHCTDSAKFVSVVMLSLSSMVRLELPHINVLSKMDLMQQYGKLAFNLDFYTDVLDLRYLLERLDEPDAADDEDEISLEPRHTTVPNSRLAERFRRMNEALVDVIEDFSLVSFLPLQIQDPATLQKLVAAIDKANGFV 276 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|159087 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_2887 ID=mRNA_2887|Name=jgi.p|Trimin1|159087|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1038bp|location=Sequence derived from alignment at Contig_8:1671415..1679279- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCTGACGATGGTGGCGAGGAGGACCAGCTGCCTTGCTTTGGCCAGATback to top protein sequence of jgi.p|Trimin1|159087 >Trimin1|159087|e_gw1.8.284.1 ID=Trimin1|159087|e_gw1.8.284.1|Name=jgi.p|Trimin1|159087|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=346bp MADDGGEEDQLPCFGQIVVGPPGSGKTTFCHGMSQYLTALGREVAIINLDback to top mRNA from alignment at Contig_8:1671415..1679279- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_2887 ID=mRNA_2887|Name=jgi.p|Trimin1|159087|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7865bp|location=Sequence derived from alignment at Contig_8:1671415..1679279- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_8:1671415..1679279- >mRNA_2887 ID=mRNA_2887|Name=jgi.p|Trimin1|159087|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1038bp|location=Sequence derived from alignment at Contig_8:1671415..1679279- (Tribonema minus UTEX_B_3156 )back to top |