mRNA_2875 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|142615 vs. uniprot
Match: A0A835YJC8_9STRA (P-type ATPase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJC8_9STRA) HSP 1 Score: 329 bits (844), Expect = 2.150e-114 Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 1
Query: 1 DGYGKTLQKPKVIGSAIEGALAMLAKDWGFNPNSMKRALFDPNVDLAYPFNAAKSSSSVLVTRKDNSGGLRLFCKGASSHVLKDCAFFTGPDGKPQPLMSDSPKRRELEEMILGMADKALCTICIAHIDFASTADLPSGWQTECPDSNQMICDAVVGIM 477
DGYGKTLQKPKVIGSAIEGALAMLAKDWGFNPNSMKRALFDPNVDLAYPFNAAKSSSSVLVTRKDNSGGLRLFCKGASSHVLKDCAFFTGPDGKPQPLMSDSPKRRELEEMILGMADKALCTICIAHIDFASTADLPSGWQTECPDSNQMICDAVVGIM
Sbjct: 1 DGYGKTLQKPKVIGSAIEGALAMLAKDWGFNPNSMKRALFDPNVDLAYPFNAAKSSSSVLVTRKDNSGGLRLFCKGASSHVLKDCAFFTGPDGKPQPLMSDSPKRRELEEMILGMADKALCTICIAHIDFASTADLPSGWQTECPDSNQMICDAVVGIM 159
BLAST of jgi.p|Trimin1|142615 vs. uniprot
Match: A0A835ZDK6_9STRA (Calcium-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDK6_9STRA) HSP 1 Score: 233 bits (595), Expect = 2.670e-68 Identity = 116/157 (73.89%), Postives = 131/157 (83.44%), Query Frame = 1
Query: 10 GKTLQKPKVIGSAIEGALAMLAKDWGFNPNSMKRALFDPNVDLAYPFNAAKSSSSVLVTRKD-NSGGLRLFCKGASSHVLKDCAFFTGPDGKPQPLMSDSPKRRELEEMILGMADKALCTICIAHIDFASTADLPSGWQTECPDSNQMICDAVVGIM 477
GK L KPKVIGSA EGAL +LA DWGFN S+K++LFDP VD YPFN+AK SSVLVTRK+ ++ GLRLFCKGAS VL+DCAFFTGPDGKPQPL KRRE+EEMI GMAD+AL TICIAHIDF S ADLP+GW+TE PDS+QM+CDAVVGIM
Sbjct: 516 GKQLHKPKVIGSATEGALVILAMDWGFNAVSLKKSLFDPAVDREYPFNSAKKRSSVLVTRKEADARGLRLFCKGASERVLQDCAFFTGPDGKPQPLTD--AKRREMEEMIFGMADRALRTICIAHIDFDSVADLPAGWETESPDSDQMVCDAVVGIM 670
BLAST of jgi.p|Trimin1|142615 vs. uniprot
Match: A0A835ZLB8_9STRA (Calcium-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLB8_9STRA) HSP 1 Score: 206 bits (524), Expect = 1.110e-58 Identity = 102/161 (63.35%), Postives = 121/161 (75.16%), Query Frame = 1
Query: 1 DGYGKTLQKPKVIGSAIEGALAMLAKDWGFNPNSMKRALFDPNVDLAYPFNAAKSSSSVLVTRKDNSG--GLRLFCKGASSHVLKDCAFFTGPDGKPQPLMSDSPKRRELEEMILGMADKALCTICIAHIDFASTADLPSGWQTECPDSNQMICDAVVGIM 477
D +GK L KPKVIGSA EGAL +L DWGFN ++K+ALFDP VD YPFN+AK SSVLV G+RL+CKGAS VL DCAF T PDGKPQPL + KR EL+EMI GMAD+AL TIC+AH D+A TA+LP+GW+T PDS+ M+CDA+VGIM
Sbjct: 478 DEHGKVLHKPKVIGSATEGALVILTTDWGFNVVTLKKALFDPAVDREYPFNSAKKRSSVLVXXXXXXXXXGVRLYCKGASERVLGDCAFITDPDGKPQPLTAH--KRHELDEMIFGMADRALRTICLAHKDYAGTAELPAGWETASPDSDDMVCDAIVGIM 636
BLAST of jgi.p|Trimin1|142615 vs. uniprot
Match: A0A6H5JXE6_9PHAE (Calcium-transporting ATPase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JXE6_9PHAE) HSP 1 Score: 153 bits (386), Expect = 4.840e-40 Identity = 80/159 (50.31%), Postives = 107/159 (67.30%), Query Frame = 1
Query: 1 DGYGKTLQKPKVIGSAIEGALAMLAKDWGFNPNSMKRALFDPNVDLAYPFNAAKSSSSVLVTRKDNSGGLRLFCKGASSHVLKDCAFFTGPDGKPQPLMSDSPKRRELEEMILGMADKALCTICIAHIDFASTADLPSGWQTECPDSNQMICDAVVGIM 477
D G L KPKVIGSA EGAL +LA +WGFN ++K F+ D YPFN+AK SSVL+T D G LRL+ KGAS +L DC + G+ + + KR+ELE +IL MA+ AL T+C+AH+D+AST+DL G++ + PD++ M+ DAVVGIM
Sbjct: 458 DENGDELHKPKVIGSATEGALVILAAEWGFNAANVKDTFFNSERDCEYPFNSAKKRSSVLITNPD--GTLRLYSKGASETILADCTRHSTQSGEIVDMTPE--KRQELEGLILSMANNALRTLCLAHMDYASTSDLDEGYEIDSPDADTMVLDAVVGIM 612
BLAST of jgi.p|Trimin1|142615 vs. uniprot
Match: A0A7S3HU65_9STRA (Calcium-transporting ATPase n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HU65_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.210e-32 Identity = 66/159 (41.51%), Postives = 93/159 (58.49%), Query Frame = 1
Query: 1 DGYGKTLQKPKVIGSAIEGALAMLAKDWGFNPNSMKRALFDPNVDLAYPFNAAKSSSSVLVTRKDNSGGLRLFCKGASSHVLKDCAFFTGPDGKPQPLMSDSPKRRELEEMILGMADKALCTICIAHIDFASTADLPSGWQTECPDSNQMICDAVVGIM 477
D G+TL +P +IG+ EGAL M+ WGF+ K F+ D + FN+AK S+ +V R D G +RL+CKGAS +LKDC F G P + K++ L+ I MADKAL T+C+AH D+ + A LP WQ PD + ++ D +VGI+
Sbjct: 422 DQEGRTLDRPAIIGNKTEGALIMMTNQWGFDHEDFKTKNFNEATDKIFSFNSAKKRSTAIVHRAD--GSVRLYCKGASEWILKDCTHFLSNAGVPTEM--SELKKQTLDVTINNMADKALRTLCLAHKDYPNAAALPENWQENPPDHDNLVLDCIVGII 576
BLAST of jgi.p|Trimin1|142615 vs. uniprot
Match: A0A7S3HT93_9STRA (Calcium-transporting ATPase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HT93_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.210e-32 Identity = 66/159 (41.51%), Postives = 93/159 (58.49%), Query Frame = 1
Query: 1 DGYGKTLQKPKVIGSAIEGALAMLAKDWGFNPNSMKRALFDPNVDLAYPFNAAKSSSSVLVTRKDNSGGLRLFCKGASSHVLKDCAFFTGPDGKPQPLMSDSPKRRELEEMILGMADKALCTICIAHIDFASTADLPSGWQTECPDSNQMICDAVVGIM 477
D G+TL +P +IG+ EGAL M+ WGF+ K F+ D + FN+AK S+ +V R D G +RL+CKGAS +LKDC F G P + K++ L+ I MADKAL T+C+AH D+ + A LP WQ PD + ++ D +VGI+
Sbjct: 436 DQEGRTLDRPAIIGNKTEGALIMMTNQWGFDHEDFKTKNFNEATDKIFSFNSAKKRSTAIVHRAD--GSVRLYCKGASEWILKDCTHFLSNAGVPTEM--SELKKQTLDVTINNMADKALRTLCLAHKDYPNAAALPENWQENPPDHDNLVLDCIVGII 590
BLAST of jgi.p|Trimin1|142615 vs. uniprot
Match: A0A482SEH8_9ARCH (HAD family hydrolase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEH8_9ARCH) HSP 1 Score: 131 bits (330), Expect = 1.570e-32 Identity = 62/159 (38.99%), Postives = 97/159 (61.01%), Query Frame = 1
Query: 1 DGYGKTLQKPKVIGSAIEGALAMLAKDWGFNPNSMKRALFDPNVDLAYPFNAAKSSSSVLVTRKDNSGGLRLFCKGASSHVLKDCAFFTGPDGKPQPLMSDSPKRRELEEMILGMADKALCTICIAHIDFASTADLPSGWQTECPDSNQMICDAVVGIM 477
D G +++P++IG+ EGAL M+ + WG + +K + D Y FN+AK S+ +V + D G +R++CKGAS +LKDC + P + P+ ++ KR LE I GMA+ AL T+C+AH DF S +DLP+ W+ PD+ ++ D +VGI+
Sbjct: 143 DQDGNVMERPQIIGNKTEGALIMMIRAWGVDYEEVKAKNYHEGTDRVYNFNSAKKRSTAVVHKPD--GSVRIYCKGASEWILKDCTHYLSPSSQEMPMTNE--KRLALERHINGMAENALRTLCLAHRDFKSVSDLPAKWEDNPPDNANLVLDCIVGII 297
BLAST of jgi.p|Trimin1|142615 vs. uniprot
Match: A0A482RX48_9ARCH (HAD family hydrolase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RX48_9ARCH) HSP 1 Score: 125 bits (313), Expect = 7.150e-32 Identity = 62/159 (38.99%), Postives = 96/159 (60.38%), Query Frame = 1
Query: 1 DGYGKTLQKPKVIGSAIEGALAMLAKDWGFNPNSMKRALFDPNVDLAYPFNAAKSSSSVLVTRKDNSGGLRLFCKGASSHVLKDCAFFTGPDGKPQPLMSDSPKRRELEEMILGMADKALCTICIAHIDFASTADLPSGWQTECPDSNQMICDAVVGIM 477
D G+ L +P ++G+ EGAL ++ + WG + ++K+ +F D + FN+AK S+ +V D G +R++CKGAS +LKDC+ P P+ + KR LE IL MA+ AL T+C+AH DF S ADLP+ W+ PD+ ++ D +VGI+
Sbjct: 47 DAEGRELDRPIIVGNKTEGALILMVQAWGHDYETVKKEIFLDGRDRVFNFNSAKKRSTAVVHMAD--GTVRVYCKGASEWILKDCSHCLTPTCTEAPMTEE--KRATLERHILSMAEGALRTLCLAHRDFKSAADLPANWEESPPDNAHLVLDCIVGII 201
BLAST of jgi.p|Trimin1|142615 vs. uniprot
Match: A0A7S3Y3V0_HETAK (Calcium-transporting ATPase n=5 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y3V0_HETAK) HSP 1 Score: 125 bits (314), Expect = 2.350e-30 Identity = 70/160 (43.75%), Postives = 95/160 (59.38%), Query Frame = 1
Query: 1 DGYGKTLQKPKVIGSAIEGALAMLAKDWGFNPNSMKRALFDPNVDLAYPFNAAKSSSSVLVTRKDNSGGLRLFCKGASSHVLKDCAFFTGPDGKPQPLMSDSPKRRELEEMILGMADKALCTICIAHIDFASTADLPSGWQTECPD--SNQMICDAVVGI 474
D G+ L KPK+ GSA EGAL MLA+ WG +P + + A+FDP D A+PFN+ K S+ +V R D G +RL+ KGAS +L +CA T G +PL RR L + MAD AL T+ +AH +F S DLP GW+ D + ++ D +VGI
Sbjct: 441 DKDGRPLPKPKIQGSATEGALLMLAEAWGVDPVARRAAVFDPERDCAFPFNSTKKRSTAVVVRPD--GKVRLYVKGASEIILANCAAKTAAGGAAEPLTEAD--RRALGTRLSKMADSALRTLGVAHREFPSVGDLPEGWKDNLGDLDAEGLVLDCLVGI 596
BLAST of jgi.p|Trimin1|142615 vs. uniprot
Match: W7TSK5_9STRA (Calcium-transporting ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSK5_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.510e-29 Identity = 60/156 (38.46%), Postives = 92/156 (58.97%), Query Frame = 1
Query: 10 GKTLQKPKVIGSAIEGALAMLAKDWGFNPNSMKRALFDPNVDLAYPFNAAKSSSSVLVTRKDNSGGLRLFCKGASSHVLKDCAFFTGPDGKPQPLMSDSPKRRELEEMILGMADKALCTICIAHIDFASTADLPSGWQTECPDSNQMICDAVVGIM 477
G L +PK++GSA EGAL ++ WG + +K F D +PFN+ K ++ L+ +K+ GGLR+ KGA+ VL DC +T DG P+ + R +++ +L MA++AL T+CIAH DF LP+ W+ PD ++CD +VGI+
Sbjct: 463 GTVLARPKIVGSATEGALLLMIHAWGLHFTHLKDRHFHKATDRVFPFNSGKKRATALIHKKN--GGLRVLVKGATEWVLNDCTAYTLSDGATMPMTPEV--RAQIDAHVLSMANRALRTLCIAHRDFPPGEALPADWEDVPPDHENLVCDGIVGII 614 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|142615 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_2875 ID=mRNA_2875|Name=jgi.p|Trimin1|142615|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=477bp|location=Sequence derived from alignment at Contig_8:1573310..1574270+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GATGGGTACGGCAAAACCCTCCAGAAGCCCAAGGTCATTGGCAGTGCCATback to top protein sequence of jgi.p|Trimin1|142615 >Trimin1|142615|gw1.8.178.1 ID=Trimin1|142615|gw1.8.178.1|Name=jgi.p|Trimin1|142615|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=159bp DGYGKTLQKPKVIGSAIEGALAMLAKDWGFNPNSMKRALFDPNVDLAYPFback to top mRNA from alignment at Contig_8:1573310..1574270+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_2875 ID=mRNA_2875|Name=jgi.p|Trimin1|142615|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=961bp|location=Sequence derived from alignment at Contig_8:1573310..1574270+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_8:1573310..1574270+ >mRNA_2875 ID=mRNA_2875|Name=jgi.p|Trimin1|142615|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=477bp|location=Sequence derived from alignment at Contig_8:1573310..1574270+ (Tribonema minus UTEX_B_3156 )back to top |