mRNA_2845 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Match: A0A835YJA7_9STRA (Carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJA7_9STRA) HSP 1 Score: 473 bits (1216), Expect = 1.120e-168 Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1
Query: 1 MLLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNFHDQKGIIKVRKSALAMRHVHLYTSL 696
MLLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNFHDQKGIIKVRKSALAMRHVHLYTSL
Sbjct: 1 MLLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNFHDQKGIIKVRKSALAMRHVHLYTSL 232
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Match: D8LLJ1_ECTSI (Carbonic anhydrase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ1_ECTSI) HSP 1 Score: 267 bits (682), Expect = 3.820e-85 Identity = 114/206 (55.34%), Postives = 165/206 (80.10%), Query Frame = 1
Query: 4 LLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNF 621
++D N++WV EDPDFFK S+H PE+ FIGCSD+RLSV+ MLG G++F+HRN+ANQ ++ D++ + L YAV+YL V+NII+CGHY+CGGV+AAM N+DHG++E W+MG+++VAR H+ EL A+ D +L+HRR+VELNVQEQ +KL+ P++Q++ A+ G PH+HA++FD+ EGL+KELDVD + ++K+ SH SMY+F
Sbjct: 181 VMDANKKWVANVKAEDPDFFKRLASIHTPEHFFIGCSDSRLSVEAMLGCGPGEVFIHRNIANQFMHNDVSILASLHYAVDYLGVKNIILCGHYECGGVRAAMANNDHGLVENWVMGVKEVARMHQDELMALGDDELIHRRLVELNVQEQCVKLFNTPILQKAHAERGGPHVHAVIFDMAEGLIKELDVDLQALVKRTSHFQSMYDF 386
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Match: A0A6S9IM72_HETAK (Carbonic anhydrase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IM72_HETAK) HSP 1 Score: 255 bits (652), Expect = 1.550e-82 Identity = 116/206 (56.31%), Postives = 151/206 (73.30%), Query Frame = 1
Query: 4 LLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNF 621
L +NNR+WV + DPD+FKN P+YLFIGC+D+R+ Q +LGL+ G+LFVHRNVAN VVN D+N + L Y+VE LKVE+II+CGHY+CGG+KAA NHDHG++E W+ IRD+ R H +EL AI+ + HRR+VELNVQEQ + LYANP+VQ++Q P IH V+D+ EGL+KEL +DFK I K YS+YNF
Sbjct: 42 LFENNRKWVAEQKKNDPDYFKNLAKGQSPKYLFIGCADSRIPAQEVLGLKCGELFVHRNVANLVVNGDMNLLAVLQYSVEVLKVEDIIVCGHYECGGIKAACANHDHGLVEHWLRNIRDINRLHAEELEAIECEEARHRRLVELNVQEQCINLYANPIVQKAQLATSLPRIHGFVYDIAEGLVKELPIDFKAEISKIKQHYSLYNF 247
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Match: A0A835ZBM8_9STRA (Carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBM8_9STRA) HSP 1 Score: 246 bits (627), Expect = 2.690e-78 Identity = 113/206 (54.85%), Postives = 152/206 (73.79%), Query Frame = 1
Query: 4 LLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNF 621
+ D+N+RWV+ L EDP+ F P+YL+IGCSD+R+ QNMLGL G+LFVHRNVAN VNTD + ++ LTYAVE L+V +II+CGHY CGGV+AAM N DHG++E W+M IR+V R H+ EL I + + H+R+VELNVQE + L+ANPVVQ+ QA +P IH V+D+G GLLK+L +DF+ I+KY ++YS+Y F
Sbjct: 23 IFDSNKRWVQDCLEEDPEIFTRLKYAQAPKYLYIGCSDSRVPAQNMLGLTTGELFVHRNVANLCVNTDYSLLSVLTYAVEVLEVTDIIVCGHYGCGGVRAAMENKDHGLLEHWLMHIRNVQRLHQAELAEIPNEEERHQRLVELNVQEACMNLFANPVVQKKQATDAQPRIHGWVYDIGSGLLKDLKIDFRTEIRKYKNIYSLYEF 228
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Match: A0A7S1N9X7_9EUGL (Carbonic anhydrase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N9X7_9EUGL) HSP 1 Score: 248 bits (632), Expect = 6.370e-78 Identity = 112/212 (52.83%), Postives = 157/212 (74.06%), Query Frame = 1
Query: 4 LLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNFHDQKGI 639
+ +NNR+W E+ DP+FFK +P+YLFIGC+D+R+ Q ++G++ G++FVHRNVAN VVN DLN ++ + YAVE L V++II+CGHY+CGGV+AA N DHG++E WI IRDV R HR EL A+ ++ HRR+VELNVQEQ + L+ANP++QR QA G P IH +V+DVGEGLL++LD+DFK I++ H+Y +F + K +
Sbjct: 137 IFENNRKWAEQMRKTDPNFFKRLKQGQEPKYLFIGCADSRIPAQELMGMKAGEMFVHRNVANLVVNNDLNLLSVIAYAVEVLHVKDIIVCGHYECGGVRAAESNKDHGLVEHWIRNIRDVVRLHRNEL-AVLTGEMRHRRLVELNVQEQCINLFANPIIQRRQAAHGLPRIHGMVYDVGEGLLRKLDLDFKHSIREMRHIYDTGHFSNWKAM 347
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Match: A0A1W6IYH0_SACJA (Carbonic anhydrase n=2 Tax=Saccharina japonica TaxID=88149 RepID=A0A1W6IYH0_SACJA) HSP 1 Score: 244 bits (624), Expect = 2.020e-77 Identity = 114/206 (55.34%), Postives = 149/206 (72.33%), Query Frame = 1
Query: 4 LLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNF 621
+ NNR WVE ++EDPD FK + +P+YL+IGCSD+R+ QNM+GL G+LFV RNVAN VNTD + + LTYAV L+V +II+CGHY CGGV+AAM N DHG++E W++ IR+V R H EL+ I D D H+R+VELNVQE + L+ANP+VQ+ QA +P IH V+DV GLLK+LD+DFK I+KY VY +Y F
Sbjct: 86 IFQNNRDWVEGTISEDPDTFKRLATSQQPKYLYIGCSDSRVPAQNMMGLTTGELFVVRNVANLCVNTDHSLLAALTYAVNVLEVTDIIVCGHYGCGGVRAAMENVDHGLLEHWLLNIRNVQRLHLDELKTIPDVDERHKRLVELNVQESCINLFANPIVQKKQATSSQPKIHGWVYDVATGLLKKLDIDFKSEIRKYQDVYRLYEF 291
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Match: D8LR72_ECTSI (Carbonic anhydrase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR72_ECTSI) HSP 1 Score: 244 bits (624), Expect = 4.880e-77 Identity = 114/203 (56.16%), Postives = 145/203 (71.43%), Query Frame = 1
Query: 13 NNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNF 621
NNR WVE +L +DPD FK + KP Y++IGCSD+R+ QNM+GL G+LFV RNVAN VNTD + + L YAV L+V +II+CGHY CGGV+AAM N DHG++E W++ IR+V R H +EL+ I D D RR+VELNVQE + L+ANP+VQ+ QA P IH +DVG GLLKELD+DFK I+KY VY +Y F
Sbjct: 94 NNRAWVEERLAQDPDTFKRLANSQKPRYMYIGCSDSRVPAQNMMGLNTGELFVVRNVANLCVNTDHSLLAALAYAVNVLEVTDIIVCGHYGCGGVRAAMENIDHGLLEHWLLNIRNVVRLHNEELQGISDMDEKSRRLVELNVQESCINLFANPIVQKKQATHSMPKIHGWAYDVGNGLLKELDIDFKAEIRKYRDVYRLYEF 296
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Match: A0A7S2XTK6_9STRA (Carbonic anhydrase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTK6_9STRA) HSP 1 Score: 239 bits (610), Expect = 5.010e-76 Identity = 109/207 (52.66%), Postives = 147/207 (71.01%), Query Frame = 1
Query: 4 LLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMR-NHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNF 621
+ +NN++WV + L EDPD+FK KP YLFIGCSD+R+ ++GL G +FVHRNVAN VVN D+N ++ L Y+VE LKV ++I+CGHY CGGVKAA DHG++E W+ I+DV R H+ EL I+D + H R+VEL+VQEQ + L+ANP+VQRSQ G P IH V+D+G G L+EL++DFKK + K +YS Y+F
Sbjct: 45 IFENNKKWVHKHLEEDPDYFKKLKMGQKPRYLFIGCSDSRVPANEIMGLSAGDVFVHRNVANLVVNGDMNLLSVLQYSVEVLKVRDVIVCGHYGCGGVKAASTIGTDHGLLEHWLRNIKDVIRVHQDELNTIEDEEKRHERLVELSVQEQCINLFANPIVQRSQVTHGYPRIHGFVYDIGNGYLRELEIDFKKEVSKLKDIYSHYDF 251
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Match: A0A0L0G5A6_9EUKA (Carbonic anhydrase n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G5A6_9EUKA) HSP 1 Score: 238 bits (608), Expect = 4.270e-75 Identity = 113/205 (55.12%), Postives = 151/205 (73.66%), Query Frame = 1
Query: 4 LLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMR-NHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMY 615
++ NNR WVE++L +PD+FKNQ P+YL+IGCSDAR+ +N+ GL G++FVHRN+AN VVNTD+N ++ LTYAVE LKV++II+CGHY CGGVK A NHD GIIE W+ IRDV R H EL +I D ++ +RR+VELNV EQ + L+ VVQ S+ + G P IH LV+D+G+GLLKEL++D +K+Y VY +Y
Sbjct: 102 IMGNNRAWVEKRLETEPDYFKNQKLGQTPKYLWIGCSDARVPAENLTGLNDGEIFVHRNIANMVVNTDINMLSVLTYAVEVLKVKHIIVCGHYGCGGVKTATEANHDLGIIEHWLRNIRDVKRLHMTELNSIVDEEVRYRRLVELNVVEQCINLFKTGVVQNSRTESGYPLIHGLVYDIGDGLLKELNLDLIGYMKQYRSVYRLY 306
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Match: H6WB75_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB75_VAULI) HSP 1 Score: 224 bits (572), Expect = 1.240e-69 Identity = 99/206 (48.06%), Postives = 145/206 (70.39%), Query Frame = 1
Query: 4 LLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNF 621
L +NN++WV + +DP+ F +P+YL+IGCSD+R+ QNMLGL+ G+LFV RNVAN +N+D + ++ L +++E L+V ++I+CGHY CGGV AAM+N DHG++E W+ IR+V R H+ EL I D +R+VELNVQE L L++NP+VQ+ QA +P IH V+D+ G +K+L +DFK IKKY +Y +Y+F
Sbjct: 57 LFENNKKWVRESVEKDPEVFTRLKDAQQPKYLYIGCSDSRVPAQNMLGLQAGELFVIRNVANLCINSDFSLLSVLLFSIEVLEVTDVIVCGHYGCGGVNAAMKNKDHGLLEHWLHHIRNVQRLHKSELVQIPDESQRFKRLVELNVQESCLNLFSNPIVQKKQATASQPRIHGWVYDIATGYVKDLKIDFKTEIKKYRDIYRLYDF 262 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_2845 ID=mRNA_2845|Name=jgi.p|Trimin1|159284|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=699bp|location=Sequence derived from alignment at Contig_8:1260529..1264012- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCTCCTCGACAACAACCGGCGCTGGGTGGAGAGGAAGCTCACAGAGGAback to top protein sequence of jgi.p|Trimin1|159284 >Trimin1|159284|e_gw1.8.74.1 ID=Trimin1|159284|e_gw1.8.74.1|Name=jgi.p|Trimin1|159284|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=233bp MLLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLback to top mRNA from alignment at Contig_8:1260529..1264012- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_2845 ID=mRNA_2845|Name=jgi.p|Trimin1|159284|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3484bp|location=Sequence derived from alignment at Contig_8:1260529..1264012- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_8:1260529..1264012- >mRNA_2845 ID=mRNA_2845|Name=jgi.p|Trimin1|159284|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=699bp|location=Sequence derived from alignment at Contig_8:1260529..1264012- (Tribonema minus UTEX_B_3156 )back to top |