mRNA_2845 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|159284
Unique NamemRNA_2845
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Match: A0A835YJA7_9STRA (Carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJA7_9STRA)

HSP 1 Score: 473 bits (1216), Expect = 1.120e-168
Identity = 232/232 (100.00%), Postives = 232/232 (100.00%), Query Frame = 1
Query:    1 MLLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNFHDQKGIIKVRKSALAMRHVHLYTSL 696
            MLLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNFHDQKGIIKVRKSALAMRHVHLYTSL
Sbjct:    1 MLLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNFHDQKGIIKVRKSALAMRHVHLYTSL 232          
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Match: D8LLJ1_ECTSI (Carbonic anhydrase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLJ1_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 3.820e-85
Identity = 114/206 (55.34%), Postives = 165/206 (80.10%), Query Frame = 1
Query:    4 LLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNF 621
            ++D N++WV     EDPDFFK   S+H PE+ FIGCSD+RLSV+ MLG   G++F+HRN+ANQ ++ D++ +  L YAV+YL V+NII+CGHY+CGGV+AAM N+DHG++E W+MG+++VAR H+ EL A+ D +L+HRR+VELNVQEQ +KL+  P++Q++ A+ G PH+HA++FD+ EGL+KELDVD + ++K+ SH  SMY+F
Sbjct:  181 VMDANKKWVANVKAEDPDFFKRLASIHTPEHFFIGCSDSRLSVEAMLGCGPGEVFIHRNIANQFMHNDVSILASLHYAVDYLGVKNIILCGHYECGGVRAAMANNDHGLVENWVMGVKEVARMHQDELMALGDDELIHRRLVELNVQEQCVKLFNTPILQKAHAERGGPHVHAVIFDMAEGLIKELDVDLQALVKRTSHFQSMYDF 386          
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Match: A0A6S9IM72_HETAK (Carbonic anhydrase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9IM72_HETAK)

HSP 1 Score: 255 bits (652), Expect = 1.550e-82
Identity = 116/206 (56.31%), Postives = 151/206 (73.30%), Query Frame = 1
Query:    4 LLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNF 621
            L +NNR+WV  +   DPD+FKN      P+YLFIGC+D+R+  Q +LGL+ G+LFVHRNVAN VVN D+N +  L Y+VE LKVE+II+CGHY+CGG+KAA  NHDHG++E W+  IRD+ R H +EL AI+  +  HRR+VELNVQEQ + LYANP+VQ++Q     P IH  V+D+ EGL+KEL +DFK  I K    YS+YNF
Sbjct:   42 LFENNRKWVAEQKKNDPDYFKNLAKGQSPKYLFIGCADSRIPAQEVLGLKCGELFVHRNVANLVVNGDMNLLAVLQYSVEVLKVEDIIVCGHYECGGIKAACANHDHGLVEHWLRNIRDINRLHAEELEAIECEEARHRRLVELNVQEQCINLYANPIVQKAQLATSLPRIHGFVYDIAEGLVKELPIDFKAEISKIKQHYSLYNF 247          
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Match: A0A835ZBM8_9STRA (Carbonic anhydrase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBM8_9STRA)

HSP 1 Score: 246 bits (627), Expect = 2.690e-78
Identity = 113/206 (54.85%), Postives = 152/206 (73.79%), Query Frame = 1
Query:    4 LLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNF 621
            + D+N+RWV+  L EDP+ F        P+YL+IGCSD+R+  QNMLGL  G+LFVHRNVAN  VNTD + ++ LTYAVE L+V +II+CGHY CGGV+AAM N DHG++E W+M IR+V R H+ EL  I + +  H+R+VELNVQE  + L+ANPVVQ+ QA   +P IH  V+D+G GLLK+L +DF+  I+KY ++YS+Y F
Sbjct:   23 IFDSNKRWVQDCLEEDPEIFTRLKYAQAPKYLYIGCSDSRVPAQNMLGLTTGELFVHRNVANLCVNTDYSLLSVLTYAVEVLEVTDIIVCGHYGCGGVRAAMENKDHGLLEHWLMHIRNVQRLHQAELAEIPNEEERHQRLVELNVQEACMNLFANPVVQKKQATDAQPRIHGWVYDIGSGLLKDLKIDFRTEIRKYKNIYSLYEF 228          
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Match: A0A7S1N9X7_9EUGL (Carbonic anhydrase n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1N9X7_9EUGL)

HSP 1 Score: 248 bits (632), Expect = 6.370e-78
Identity = 112/212 (52.83%), Postives = 157/212 (74.06%), Query Frame = 1
Query:    4 LLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNFHDQKGI 639
            + +NNR+W E+    DP+FFK      +P+YLFIGC+D+R+  Q ++G++ G++FVHRNVAN VVN DLN ++ + YAVE L V++II+CGHY+CGGV+AA  N DHG++E WI  IRDV R HR EL A+   ++ HRR+VELNVQEQ + L+ANP++QR QA  G P IH +V+DVGEGLL++LD+DFK  I++  H+Y   +F + K +
Sbjct:  137 IFENNRKWAEQMRKTDPNFFKRLKQGQEPKYLFIGCADSRIPAQELMGMKAGEMFVHRNVANLVVNNDLNLLSVIAYAVEVLHVKDIIVCGHYECGGVRAAESNKDHGLVEHWIRNIRDVVRLHRNEL-AVLTGEMRHRRLVELNVQEQCINLFANPIIQRRQAAHGLPRIHGMVYDVGEGLLRKLDLDFKHSIREMRHIYDTGHFSNWKAM 347          
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Match: A0A1W6IYH0_SACJA (Carbonic anhydrase n=2 Tax=Saccharina japonica TaxID=88149 RepID=A0A1W6IYH0_SACJA)

HSP 1 Score: 244 bits (624), Expect = 2.020e-77
Identity = 114/206 (55.34%), Postives = 149/206 (72.33%), Query Frame = 1
Query:    4 LLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNF 621
            +  NNR WVE  ++EDPD FK   +  +P+YL+IGCSD+R+  QNM+GL  G+LFV RNVAN  VNTD + +  LTYAV  L+V +II+CGHY CGGV+AAM N DHG++E W++ IR+V R H  EL+ I D D  H+R+VELNVQE  + L+ANP+VQ+ QA   +P IH  V+DV  GLLK+LD+DFK  I+KY  VY +Y F
Sbjct:   86 IFQNNRDWVEGTISEDPDTFKRLATSQQPKYLYIGCSDSRVPAQNMMGLTTGELFVVRNVANLCVNTDHSLLAALTYAVNVLEVTDIIVCGHYGCGGVRAAMENVDHGLLEHWLLNIRNVQRLHLDELKTIPDVDERHKRLVELNVQESCINLFANPIVQKKQATSSQPKIHGWVYDVATGLLKKLDIDFKSEIRKYQDVYRLYEF 291          
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Match: D8LR72_ECTSI (Carbonic anhydrase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR72_ECTSI)

HSP 1 Score: 244 bits (624), Expect = 4.880e-77
Identity = 114/203 (56.16%), Postives = 145/203 (71.43%), Query Frame = 1
Query:   13 NNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNF 621
            NNR WVE +L +DPD FK   +  KP Y++IGCSD+R+  QNM+GL  G+LFV RNVAN  VNTD + +  L YAV  L+V +II+CGHY CGGV+AAM N DHG++E W++ IR+V R H +EL+ I D D   RR+VELNVQE  + L+ANP+VQ+ QA    P IH   +DVG GLLKELD+DFK  I+KY  VY +Y F
Sbjct:   94 NNRAWVEERLAQDPDTFKRLANSQKPRYMYIGCSDSRVPAQNMMGLNTGELFVVRNVANLCVNTDHSLLAALAYAVNVLEVTDIIVCGHYGCGGVRAAMENIDHGLLEHWLLNIRNVVRLHNEELQGISDMDEKSRRLVELNVQESCINLFANPIVQKKQATHSMPKIHGWAYDVGNGLLKELDIDFKAEIRKYRDVYRLYEF 296          
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Match: A0A7S2XTK6_9STRA (Carbonic anhydrase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XTK6_9STRA)

HSP 1 Score: 239 bits (610), Expect = 5.010e-76
Identity = 109/207 (52.66%), Postives = 147/207 (71.01%), Query Frame = 1
Query:    4 LLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMR-NHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNF 621
            + +NN++WV + L EDPD+FK      KP YLFIGCSD+R+    ++GL  G +FVHRNVAN VVN D+N ++ L Y+VE LKV ++I+CGHY CGGVKAA     DHG++E W+  I+DV R H+ EL  I+D +  H R+VEL+VQEQ + L+ANP+VQRSQ   G P IH  V+D+G G L+EL++DFKK + K   +YS Y+F
Sbjct:   45 IFENNKKWVHKHLEEDPDYFKKLKMGQKPRYLFIGCSDSRVPANEIMGLSAGDVFVHRNVANLVVNGDMNLLSVLQYSVEVLKVRDVIVCGHYGCGGVKAASTIGTDHGLLEHWLRNIKDVIRVHQDELNTIEDEEKRHERLVELSVQEQCINLFANPIVQRSQVTHGYPRIHGFVYDIGNGYLRELEIDFKKEVSKLKDIYSHYDF 251          
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Match: A0A0L0G5A6_9EUKA (Carbonic anhydrase n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G5A6_9EUKA)

HSP 1 Score: 238 bits (608), Expect = 4.270e-75
Identity = 113/205 (55.12%), Postives = 151/205 (73.66%), Query Frame = 1
Query:    4 LLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMR-NHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMY 615
            ++ NNR WVE++L  +PD+FKNQ     P+YL+IGCSDAR+  +N+ GL  G++FVHRN+AN VVNTD+N ++ LTYAVE LKV++II+CGHY CGGVK A   NHD GIIE W+  IRDV R H  EL +I D ++ +RR+VELNV EQ + L+   VVQ S+ + G P IH LV+D+G+GLLKEL++D    +K+Y  VY +Y
Sbjct:  102 IMGNNRAWVEKRLETEPDYFKNQKLGQTPKYLWIGCSDARVPAENLTGLNDGEIFVHRNIANMVVNTDINMLSVLTYAVEVLKVKHIIVCGHYGCGGVKTATEANHDLGIIEHWLRNIRDVKRLHMTELNSIVDEEVRYRRLVELNVVEQCINLFKTGVVQNSRTESGYPLIHGLVYDIGDGLLKELNLDLIGYMKQYRSVYRLY 306          
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Match: H6WB75_VAULI (Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB75_VAULI)

HSP 1 Score: 224 bits (572), Expect = 1.240e-69
Identity = 99/206 (48.06%), Postives = 145/206 (70.39%), Query Frame = 1
Query:    4 LLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGLEMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVKAAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSHVYSMYNF 621
            L +NN++WV   + +DP+ F       +P+YL+IGCSD+R+  QNMLGL+ G+LFV RNVAN  +N+D + ++ L +++E L+V ++I+CGHY CGGV AAM+N DHG++E W+  IR+V R H+ EL  I D     +R+VELNVQE  L L++NP+VQ+ QA   +P IH  V+D+  G +K+L +DFK  IKKY  +Y +Y+F
Sbjct:   57 LFENNKKWVRESVEKDPEVFTRLKDAQQPKYLYIGCSDSRVPAQNMLGLQAGELFVIRNVANLCINSDFSLLSVLLFSIEVLEVTDVIVCGHYGCGGVNAAMKNKDHGLLEHWLHHIRNVQRLHKSELVQIPDESQRFKRLVELNVQESCLNLFSNPIVQKKQATASQPRIHGWVYDIATGYVKDLKIDFKTEIKKYRDIYRLYDF 262          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|159284 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YJA7_9STRA1.120e-168100.00Carbonic anhydrase n=1 Tax=Tribonema minus TaxID=3... [more]
D8LLJ1_ECTSI3.820e-8555.34Carbonic anhydrase n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6S9IM72_HETAK1.550e-8256.31Carbonic anhydrase n=1 Tax=Heterosigma akashiwo Ta... [more]
A0A835ZBM8_9STRA2.690e-7854.85Carbonic anhydrase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7S1N9X7_9EUGL6.370e-7852.83Carbonic anhydrase n=1 Tax=Eutreptiella gymnastica... [more]
A0A1W6IYH0_SACJA2.020e-7755.34Carbonic anhydrase n=2 Tax=Saccharina japonica Tax... [more]
D8LR72_ECTSI4.880e-7756.16Carbonic anhydrase n=1 Tax=Ectocarpus siliculosus ... [more]
A0A7S2XTK6_9STRA5.010e-7652.66Carbonic anhydrase n=1 Tax=Fibrocapsa japonica Tax... [more]
A0A0L0G5A6_9EUKA4.270e-7555.12Carbonic anhydrase n=1 Tax=Sphaeroforma arctica JP... [more]
H6WB75_VAULI1.240e-6948.06Carbonic anhydrase n=1 Tax=Vaucheria litorea TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_8contigContig_8:1260529..1264012 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|159284|e_gw1.8.74.1
BRITEko00000,ko00001,ko01000
KEGG rclassRC02807
KEGG ReactionR00132,R10092
KEGG Pathwayko00910,map00910
KEGG koko:K01673
EC4.2.1.1
Descriptioncarbonate dehydratase activity
COG categoryP
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0288@1|root,KOG1578@2759|Eukaryota
Evalue6.26e-86
Seed ortholog2880.D8LLJ1
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptioncarbonic anhydrase
Ec32 orthologEc-22_001150.1
TranscriptId159606
TrackFilteredModels1
ProteinId159284
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|159284gene_2845Tribonema minus UTEX_B_3156 geneContig_8 1260529..1264012 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|159284Trimin1|159284|e_gw1.8.74.1Tribonema minus UTEX_B_3156 polypeptideContig_8 1260529..1264012 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_2845_6exon_2845_6Tribonema minus UTEX_B_3156 exonContig_8 1260529..1260669 -
exon_2845_5exon_2845_5Tribonema minus UTEX_B_3156 exonContig_8 1261134..1261241 -
exon_2845_4exon_2845_4Tribonema minus UTEX_B_3156 exonContig_8 1261644..1261712 -
exon_2845_3exon_2845_3Tribonema minus UTEX_B_3156 exonContig_8 1262362..1262484 -
exon_2845_2exon_2845_2Tribonema minus UTEX_B_3156 exonContig_8 1263184..1263288 -
exon_2845_1exon_2845_1Tribonema minus UTEX_B_3156 exonContig_8 1263860..1264012 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_2845CDS_2845Tribonema minus UTEX_B_3156 CDSContig_8 1263860..1264012 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_2845 ID=mRNA_2845|Name=jgi.p|Trimin1|159284|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=699bp|location=Sequence derived from alignment at Contig_8:1260529..1264012- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTCCTCGACAACAACCGGCGCTGGGTGGAGAGGAAGCTCACAGAGGA
CCCCGACTTCTTCAAGAACCAGCTCTCTGTGCACAAGCCTGAGTACCTGT
TCATCGGCTGCTCCGACGCGCGCCTGAGCGTGCAGAACATGCTGGGACTC
GAGATGGGCCAGCTGTTTGTGCACCGCAACGTCGCCAACCAGGTGGTCAA
CACGGACCTCAACTTCATCACGTGCCTCACGTACGCGGTGGAGTACCTCA
AAGTTGAGAACATCATCATCTGCGGCCACTACGACTGCGGCGGCGTGAAG
GCCGCCATGCGCAACCACGACCATGGCATCATTGAGCAGTGGATCATGGG
CATCCGCGACGTCGCGCGCTACCACCGCAAGGAGCTGCGGGCCATCAAGG
ACCCGGACCTGGTGCACCGCCGCATGGTCGAGCTCAACGTGCAGGAGCAG
GCCCTCAAGCTGTACGCCAATCCCGTGGTCCAGCGCAGCCAGGCGCAGGG
TGGCAAGCCCCACATCCACGCGCTCGTCTTTGACGTCGGCGAGGGCCTGC
TCAAGGAGCTCGACGTGGACTTCAAGAAGATCATCAAGAAGTACAGCCAC
GTGTACTCCATGTACAACTTCCACGACCAGAAGGGCATCATCAAGGTGCG
CAAATCTGCACTCGCGATGCGCCATGTGCACCTCTACACAAGCCTTTGA
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protein sequence of jgi.p|Trimin1|159284

>Trimin1|159284|e_gw1.8.74.1 ID=Trimin1|159284|e_gw1.8.74.1|Name=jgi.p|Trimin1|159284|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=233bp
MLLDNNRRWVERKLTEDPDFFKNQLSVHKPEYLFIGCSDARLSVQNMLGL
EMGQLFVHRNVANQVVNTDLNFITCLTYAVEYLKVENIIICGHYDCGGVK
AAMRNHDHGIIEQWIMGIRDVARYHRKELRAIKDPDLVHRRMVELNVQEQ
ALKLYANPVVQRSQAQGGKPHIHALVFDVGEGLLKELDVDFKKIIKKYSH
VYSMYNFHDQKGIIKVRKSALAMRHVHLYTSL*
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mRNA from alignment at Contig_8:1260529..1264012-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_2845 ID=mRNA_2845|Name=jgi.p|Trimin1|159284|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3484bp|location=Sequence derived from alignment at Contig_8:1260529..1264012- (Tribonema minus UTEX_B_3156 )
ATGCTCCTCGACAACAACCGGCGCTGGGTGGAGAGGAAGCTCACAGAGGA CCCCGACTTCTTCAAGAACCAGCTCTCTGTGCACAAGCCTGAGTACCTGT TCATCGGCTGCTCCGACGCGCGCCTGAGCGTGCAGAACATGCTGGGACTC GAGGTAGGACGCAGAGTCTTCTGTGGTACTCAGTGCCTATTGTGTGACTT AGGGTCTCGTGCATGACTCTGTGGTGTTCAGCGACTTGACTGGCGATGTC TGTGGCGACATCTCGGCGAACACGAGTGCCCGCATGAGTTTGCGAAGGCC TGTCGCAGTCTCACCTGGGCAGGTGCATACATATCTGTTGCTGAAGATGC TGGAACTCGCAGTGAGACTGTGACTGAGACTCTCTTGTGATGAGTGAGCG CGAGGTCGCGAACGCGCGCTGGAGCGTCAACTGGGTGCATACATACCTAC CTGCTGCGCTTACACATTCTGCGGCGCTCTCTTGTTACGCCAACTGGGTC CTGTGTGTGTGCAGATGGGCCAGCTGTTTGTCAGCTGGATGCATACAGTA GCTGTTCCGATGCATGGCTGAATATTCAAGAAGGAGCACAAACGACAGCA TTTGCCACGCTCAACTCCAAGCTCTGCAGAAAAATCAAAAGGTGGTACAG CGGAGAGCCTTCCATCGCGTTGCGCTCACACATCCTGCGGCGCTCGCTCG TTACACACGTTTCTGTGTGTGCAGATGGGCCAGCTGTTTGTGCACCGCAA CGTCGCCAACCAGGTGGTCAACACGGACCTCAACTTCATCACGTGCCTCA CGTACGCGGTGGAGTACCTCAAAGTTGAGGTAAGACGAGCGGGATGGGCA TTTAGAGGGCCACGCATGCTGGTGGAAGTGCGTACTCGAAGTGTGTTATG GTTTTGCAATGCGAAGTAAGCTTGCCTCGCAGTGCGATTTTGCGTTCTGT TGCAGTAGCAAGAGTGCGGTGTCGATGCCGCCAAACCGTTCTCAATGGAG ACGGATTGCGTCAGGAATGCGGTGCGCTCCATTGTACATCTGTCCCTTAC GCCGTGCTTCACGACCTCACCACTTGCAGCCACTAAACGGTGGCGGCATG AGCGCGCTGTCCTCACCCTGCACTCACCTGTACCGGCAGTTTACTGAGCA GAACATCGTTGTCTGCGGCCAATGGCGGCTTGTACACACTGTCCTCACCC TGCACTCAACTGTACCCTCACTGTACTGCTCATAACAGCATCACCTGCAG CCACTTATGCCGGCATGAGCGCGTTGTCCTCACCCTGTCCCCACCCTGTA CTCACGTGTACCCACACTGTACCAGCAGACCATCATAATCTGTGGCCACT TCGACTGTGGCGGTGTGAAGGCCGCCATGCGCAACTGCTGCCCTCACCCT GTACTCACCTGTACCCTCACTGTACCACCCATAACATCACACCCTGCGGC CACTGCTGGCGGCATGCGCGCCCTGTCCTCACCCTGTACTCACCTGTACC CACACTGTACCCTGACTGTACCGCGCAGAACATCATCATCTGCGGCCACT ACGACTGCGGCGGCGTGAAGGCCGCCATGCGCAACCACGACCATGGCATC ATTGAGCAGTGGATCATGGGCATCCGCGACGTCGCGCGCTACCACCGCAA GGTATGTATGTAGGGTTGCACAGAAGCACATTTTGAAGTTTATTTCTCAG TTCAAGTGGCCCTGCTGTGGTGGACTGCATGCTCGGAATCAAGCAGACTC ACGAATACGCCCATCGCGTAGCATGTTATCACGTTGAGGTTTGCTTAAGA CGTATTCCTGGTTCCCAAATATGCCTCAAAATACGCCGTCTTTGTGTGGC CAAATACGTTTTCGTGCAACCCTACATGTATGTTGTGTCTAAGTGCCCTT CCACCCAGTTGTATTGCGTTTGTGCTGCAGCTGGGGTTGGGGGTGGGGGG AGGAGGGGGGGTATTCAAACACTCGGTCATGCTCAAATTGTCTGAGCTTG GGTGCCGCCGGCGTCGGCGGGGAGGGTAGGGGGGAGTGGGGGGAGGAAAA TGCTTGGTCATATGCTATCATTGTCCTAGCAGCGCTGCATCGTGTTATAT CCAAAAGCATGCCGGCGAAGTGGATCCTGTAGTGGAGACGCACTAGATGG ACATCGTACACCAGCACCGCAACGTACGCAGGCACCAAAGCAGTCTCTGT TCTACTGCGTTCATCTTGAGGTGGTGCGCAGCTTTCTGAACTGGCAGCGG CTGACTTGCGGTATGCGCCCTTTTTGTCATTTTTTTCCCCCATCGCTCAG GAGCTGCGGGCCATCAAGGACCCGGACCTGGTGCACCGCCGCATGGTCGA GCTCAACGTGCAGGAGCAGGTACGTACTTTGAGTATATGTCAATGAATGC CACCTTTACCTACGCCCCCCTAGCCCTAGCCCAAGGCAGCACACAGGCGG TGCCACACAGTCACGATTACTTGGGTGGAACTGGGTGTGGACAACTGGCT GCCCGCTCACGACAGTATGGGTGTACCGGAGATTGTACCAGCGGTCATGA CTTCATATTGCAGTTGATGCATTACCTTGAGCATGCAGGCGGGACGTCGA AGCATTGTTAGTGAGCTTTCTCATCATGCCTCGACTTGGACTCGTATCAG GGCAGTTGCGTGCACCAGCTTTTGAGACCGTTGCACCGTGACGGCGTCAG CGCTTGCGACGCATTTGTGATGGAAGGTCTTACTCGGTCCCTCTCTGAGT GTTCAACTTCAAACCGCGCAGGCCCTCAAGCTGTACGCCAATCCCGTGGT CCAGCGCAGCCAGGCGCAGGGTGGCAAGCCCCACATCCACGCGCTCGTCT TTGACGTCGGCGAGGGCCTGCTCAAGGAGGTATGTATGCTGGCATGCATG CCTGCGCTCACGGTACTTTCTGGCGATAGAATTCCGCTACTAGGGTGGTG TGGCGCTTGCGTGCATGCATGCATGCCGCCATGTGAGTGATACTCCCCGG CAATAGCATCCCTCTATCAGGGTGGTTTTGCGCTCATCGCTCGTCTCCTC GCGAGGTAGATGTACGCTGCAAGGCGCACGTTGCACGGTGTGCCTTGAGT TCCTTGTTGAAGTAGGTGTATGTTGCGTTGACACTGCCATGGCAAGCCCT ACTCGTCTCTGACGTCGGCGAGGGCCCGCTCAAGGACGAATTTATGTATG CTGCTGTGTGCATGATACATATCGGGCATGCAACTGCGAATAGTGTGAGC AGTGTACTTATTGAGATGACTCAGCGCTGAGTCACTGTCGCAACGTCTCA TCGTCCATATGCGCTCTCCCTGAAATCGCAAATGCAACTGCAGCTCGACG TGGACTTCAAGAAGATCATCAAGAAGTACAGCCACGTGTACTCCATGTAC AACTTCCACGACCAGAAGGGCATCATCAAGGTGCGCAAATCTGCACTCGC GATGCGCCATGTGCACCTCTACACAAGCCTTTGA
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Coding sequence (CDS) from alignment at Contig_8:1260529..1264012-

>mRNA_2845 ID=mRNA_2845|Name=jgi.p|Trimin1|159284|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=699bp|location=Sequence derived from alignment at Contig_8:1260529..1264012- (Tribonema minus UTEX_B_3156 )
ATGCTCCTCGACAACAACCGGCGCTGGGTGGAGAGGAAGCTCACAGAGGA
CCCCGACTTCTTCAAGAACCAGCTCTCTGTGCACAAGCCTGAGTACCTGT
TCATCGGCTGCTCCGACGCGCGCCTGAGCGTGCAGAACATGCTGGGACTC
GAGATGGGCCAGCTGTTTGTGCACCGCAACGTCGCCAACCAGGTGGTCAA
CACGGACCTCAACTTCATCACGTGCCTCACGTACGCGGTGGAGTACCTCA
AAGTTGAGAACATCATCATCTGCGGCCACTACGACTGCGGCGGCGTGAAG
GCCGCCATGCGCAACCACGACCATGGCATCATTGAGCAGTGGATCATGGG
CATCCGCGACGTCGCGCGCTACCACCGCAAGGAGCTGCGGGCCATCAAGG
ACCCGGACCTGGTGCACCGCCGCATGGTCGAGCTCAACGTGCAGGAGCAG
GCCCTCAAGCTGTACGCCAATCCCGTGGTCCAGCGCAGCCAGGCGCAGGG
TGGCAAGCCCCACATCCACGCGCTCGTCTTTGACGTCGGCGAGGGCCTGC
TCAAGGAGCTCGACGTGGACTTCAAGAAGATCATCAAGAAGTACAGCCAC
GTGTACTCCATGTACAACTTCCACGACCAGAAGGGCATCATCAAGGTGCG
CAAATCTGCACTCGCGATGCGCCATGTGCACCTCTACACAAGCCTTTGA
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