mRNA_2817 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|130991 vs. uniprot
Match: A0A835YTZ1_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTZ1_9STRA) HSP 1 Score: 575 bits (1483), Expect = 2.190e-207 Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 1 Query: 1 HGYVAARHVADFGHVICGATKKRTFRVVNTGRAGAVSWAFDKALLAGSGFALEPDRVARLPEGAAASVTATFQARRAFENGPREVALPIAVKNGPATLLVLRACVAVPAVAVSAALLEFGDVVVGRSCTSCLQLHNPGPVPADWELKAPLNISDARDEARFEVAPRGGRLAPGARANVAVEFVPLEGQAYATKLPLRVANSAKTHMICLQGVGVHPRVAFDPPRALLGPVLPGAPWARAIVAMRNDGAVPIEVFSLDFDAQYGAEERALAVARGYDERDVLRVPPRQPGEGL 876 HGYVAARHVADFGHVICGATKKRTFRVVNTGRAGAVSWAFDKALLAGSGFALEPDRVARLPEGAAASVTATFQARRAFENGPREVALPIAVKNGPATLLVLRACVAVPAVAVSAALLEFGDVVVGRSCTSCLQLHNPGPVPADWELKAPLNISDARDEARFEVAPRGGRLAPGARANVAVEFVPLEGQAYATKLPLRVANSAKTHMICLQGVGVHPRVAFDPPRALLGPVLPGAPWARAIVAMRNDGAVPIEVFSLDFDAQYGAEERALAVARGYDERDVLRVPPRQPGEGL Sbjct: 1 HGYVAARHVADFGHVICGATKKRTFRVVNTGRAGAVSWAFDKALLAGSGFALEPDRVARLPEGAAASVTATFQARRAFENGPREVALPIAVKNGPATLLVLRACVAVPAVAVSAALLEFGDVVVGRSCTSCLQLHNPGPVPADWELKAPLNISDARDEARFEVAPRGGRLAPGARANVAVEFVPLEGQAYATKLPLRVANSAKTHMICLQGVGVHPRVAFDPPRALLGPVLPGAPWARAIVAMRNDGAVPIEVFSLDFDAQYGAEERALAVARGYDERDVLRVPPRQPGEGL 292
BLAST of jgi.p|Trimin1|130991 vs. uniprot
Match: A0A6H5K5Z3_9PHAE (MSP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Z3_9PHAE) HSP 1 Score: 275 bits (704), Expect = 1.470e-80 Identity = 146/291 (50.17%), Postives = 198/291 (68.04%), Query Frame = 1 Query: 7 YVAARHVADFGHVICGATKKRTFRVVNTGRAGAVSWAFDKALLAGSGFALEPDRVARLPEGAAASVTATFQARRAFENGPREVALPIAVKNGPATLLVLRACVAVPAVAVSAALLEFGDVVVGRSCTSCLQLHNPGPVPADWELKAPLNISDARDEARFEVAPRGGRLAPGARANVAVEFVPLEGQAYATKLPLRVANSAKTHMICLQGVGVHPRVAFDPPRALLGPVLPGAPWARAI-VAMRNDGAVPIEVFSLDFDAQYGAEERALAVARGYDERDVLRVPPRQPGEGL 876 Y ARHVADFG+V+ G TK + FRV NTG+ G VSW+F+K +AGSG+++EP++V RLPEGA+A+ +A+FQAR+ F +G R + LPI +KNGP T++VLRA V P V +S L+F V+VG+S T +Q+HN PV A+W+ K D RDEA+F++ PRGG L R NV VEFVP + + Y+ K+ +RVA++ K + LQG G PRV FDPP +GPVLP AP + V + ND A +E+FSLDFD + EE L+ A + +VLR+PPR PG+GL Sbjct: 1856 YTVARHVADFGNVVVGFTKTKAFRVANTGKLGPVSWSFNKNSIAGSGYSIEPEKVVRLPEGASAAFSASFQARKGFPHGIRSLELPIKLKNGPQTVVVLRANVTSPEVELSHEELDFDSVLVGQSKTKYIQVHNTSPVVAEWDFKR--LFGDPRDEAKFKLTPRGGSLHKDQRVNVQVEFVPTDDRVYSLKMAVRVASTTKNASVVLQGRGAQPRVRFDPPMLDMGPVLPHAPQGDSREVTVFNDSAWDVEIFSLDFDKAHLVEEEILSRATCFAADEVLRLPPRLPGQGL 2144
BLAST of jgi.p|Trimin1|130991 vs. uniprot
Match: D7FJY6_ECTSI (Hydrocephalus-inducing protein, Hydin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJY6_ECTSI) HSP 1 Score: 271 bits (693), Expect = 4.390e-79 Identity = 144/291 (49.48%), Postives = 196/291 (67.35%), Query Frame = 1 Query: 7 YVAARHVADFGHVICGATKKRTFRVVNTGRAGAVSWAFDKALLAGSGFALEPDRVARLPEGAAASVTATFQARRAFENGPREVALPIAVKNGPATLLVLRACVAVPAVAVSAALLEFGDVVVGRSCTSCLQLHNPGPVPADWELKAPLNISDARDEARFEVAPRGGRLAPGARANVAVEFVPLEGQAYATKLPLRVANSAKTHMICLQGVGVHPRVAFDPPRALLGPVLPGAPWARAI-VAMRNDGAVPIEVFSLDFDAQYGAEERALAVARGYDERDVLRVPPRQPGEGL 876 Y ARHVADFG+V+ G TK + FRV NTG+ G VSW+F+K LAGSG+++EP++V RLPEGA+A+ +A+FQAR+ F +G R + LPI +KNGP T++VLRA V P +S L+F V+VG+S T +Q+HN PV A+W+ K D RDE +F++ P+GG L R NV VEFVP + + Y+ K+ +RVA++ K + LQG G PRV FDPP +GPVLP AP + V + ND A +E+FSLDFD + EE L+ A + +VLR+PPR PG+GL Sbjct: 1836 YTVARHVADFGNVVVGFTKTKAFRVANTGKLGPVSWSFNKNSLAGSGYSIEPEKVVRLPEGASAAFSASFQARKGFPHGIRSLELPITLKNGPQTVVVLRANVTSPEAELSHEELDFDSVLVGQSKTKYIQVHNISPVIAEWDFKR--LFGDPRDEVKFKMTPKGGSLHKDQRVNVQVEFVPTDDRVYSLKMAVRVASTTKNASVVLQGRGAQPRVRFDPPMLDMGPVLPHAPQGDSREVTVFNDSAWDVEIFSLDFDKAHLVEEEILSRATCFAADEVLRLPPRLPGQGL 2124
BLAST of jgi.p|Trimin1|130991 vs. uniprot
Match: A0A7S2QVW6_9STRA (Hypothetical protein n=2 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QVW6_9STRA) HSP 1 Score: 250 bits (638), Expect = 1.030e-71 Identity = 130/291 (44.67%), Postives = 185/291 (63.57%), Query Frame = 1 Query: 7 YVAARHVADFGHVICGATKKRTFRVVNTGRAGAVSWAFDKALLAGSGFALEPDRVARLPEGAAASVTATFQARRAFENGPREVALPIAVKNGPATLLVLRACVAVPAVAVSAALLEFGDVVVGRSCTSCLQLHNPGPVPADWELKAPLNISDARDEARFEVAPRGGRLAPGARANVAVEFVPLEGQAYATKLPLRVANSAKTHMICLQGVGVHPRVAFDPPRALLGPVLPGAPWA-RAIVAMRNDGAVPIEVFSLDFDAQYGAEERALAVARGYDERDVLRVPPRQPGEGL 876 ++ ARHV++FGHVI G T+KRTF++ NT G +SW FDK +LAG+GF+LEP++V RLPE + S TF A++ F G REV +P+ VKNGP+ +++LRA V VP + VS ++FG V VG LQL N PV ADW+ K + + +DE F++ PRGG LAPG NV++EFVP++ + +A K+PL+VA+ K I L G+G + P A GP+LP P ++ + N+ + +EV+S+DFD +Y EE L GY E V+++P R PGE L Sbjct: 966 FIIARHVSNFGHVILGQTRKRTFKITNTSALGQLSWVFDKNILAGTGFSLEPEKVVRLPENQSVSFNVTFSAKKNFALGEREVIVPLDVKNGPSMIIILRAIVTVPELTVSQDHVDFGPVWVGCVKRVFLQLKNVSPVNADWDFKKAMG--NTKDELNFKIEPRGGLLAPGQCTNVSIEFVPVDERPHALKIPLKVASGNKAKNILLTGMGEQVHLTLSPSLAEFGPILPKTPGGITKVITLTNESSKSVEVYSVDFDKKYITEEEILMKVSGYGEDGVMQLPVRSPGEPL 1254
BLAST of jgi.p|Trimin1|130991 vs. uniprot
Match: F0Y448_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y448_AURAN) HSP 1 Score: 244 bits (624), Expect = 7.770e-70 Identity = 134/298 (44.97%), Postives = 187/298 (62.75%), Query Frame = 1 Query: 1 HGYVAARHVADFGHVICGATKKRTFRVVNTGRAGAVSWAFDKALLAGSGFALEPDRVARLPEGAAASVTATFQARRAFENGPREVALPIAVKNGPATLLVLRACVAVPAVAVSAALLEFGDVVVGRSCTSCLQLHNPGPVPADWELKAPLNISDARDEARFEVAPRGGRLAPGARANVAVEFVPLEGQAYATKLPLRVANSAKTHMICLQGVGVHPRVAFDPPRALLGPVLP-----GAPWARAI-VAMRNDGAVPIEVFSLDFDAQYGAEERALAVARGYDERDVLRVPPRQPGEGL 876 HG+V A H DFG+V+ G +KRTFR+ N+ G +SW F+K +LA +GF++EP++V RL EGA A+ F A+++ G +E+ LP+ VKNGP T +VL+A V +P +++SA L+FG V VG T +Q+HN PV A+W+ K + ARDEARF ++PR G L PG + NVAVEFVP++ + + KLPL+V S KT ++ G GV ++ F P +GPVLP G P A V M+N P+EVFSLDFD +Y EE L+ + E +LR+P R GE L Sbjct: 1542 HGFVLAWHACDFGNVVSGTHRKRTFRITNSSLTGPLSWFFEKKVLANTGFSIEPEKVVRLAEGATATFEVNFNAKKSLRLGHKELLLPVDVKNGPLTCIVLQANVTMPDISLSAEALDFGPVWVGCGRTMHVQIHNTSPVLAEWDFKKAMGA--ARDEARFTLSPRSGALLPGRKQNVAVEFVPVDDRPCSLKLPLKVNQSTKTWLVNFAGAGVTAKLQFSPSVVEIGPVLPFEDGTGRPGTTATTVTMKNASDRPVEVFSLDFDDEYVTEEAFLSTYDAFGEDGLLRLPVRNLGEKL 1837
BLAST of jgi.p|Trimin1|130991 vs. uniprot
Match: A0A1V9Z071_9STRA (Hydrocephalus-inducing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z071_9STRA) HSP 1 Score: 244 bits (622), Expect = 1.430e-69 Identity = 136/291 (46.74%), Postives = 180/291 (61.86%), Query Frame = 1 Query: 4 GYVAARHVADFGHVICGATKKRTFRVVNTGRAGAVSWAFDKALLAGSGFALEPDRVARLPEGAAASVTATFQARRAFENGPREVALPIAVKNGPATLLVLRACVAVPAVAVSAALLEFGDVVVGRSCTSCLQLHNPGPVPADWELKAPLNISDARDEARFEVAPRGGRLAPGARANVAVEFVPLEGQAYATKLPLRVANSAKTHMICLQGVGVHPRVAFDPPRALLGPVLPGAPWARAIVAMRNDGAVPIEVFSLDFDAQYGAEERALAVARGYDERDVLRVPPRQPGEGL 876 GY+ A+++ DFG+V+ G + + F + NTG+ S+ DK L G GFA++P+RV RLPE TF AR+ +G V L + VKNGP +LL +A V VP + + A ++FG VVVGRS QL+N PV +W LK P+ ARD + F + P GG L PG R N+ VEF+PLEG+ Y K+P++++++ KT I QG G RVAFDPP A LGPVLP A V MRN+ P+EV+SLDFDAQY EE L A GY + D LR+P R PG+GL Sbjct: 1557 GYLLAQYILDFGNVVTGTHRVKKFVITNTGQI-PTSFQLDKNLALGRGFAIDPERVVRLPEKKGVEFNVTFTARKNGRHGAHGVNLLLDVKNGPPSLLTFKANVTVPDLVLLAENIDFGKVVVGRSHVVHSQLYNNSPVVVEWSLKKPMG--SARDVSYFRMEPMGGLLHPGTRCNLKVEFMPLEGRLYHVKVPVKISSNPKTRAISCQGEGTELRVAFDPPMAELGPVLPFATPVERTVVMRNESDHPVEVYSLDFDAQYRDEEEILRDASGYGDDDYLRLPLRLPGQGL 1844
BLAST of jgi.p|Trimin1|130991 vs. uniprot
Match: A0A067C275_SAPPC (MSP domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C275_SAPPC) HSP 1 Score: 235 bits (599), Expect = 1.730e-66 Identity = 133/291 (45.70%), Postives = 176/291 (60.48%), Query Frame = 1 Query: 4 GYVAARHVADFGHVICGATKKRTFRVVNTGRAGAVSWAFDKALLAGSGFALEPDRVARLPEGAAASVTATFQARRAFENGPREVALPIAVKNGPATLLVLRACVAVPAVAVSAALLEFGDVVVGRSCTSCLQLHNPGPVPADWELKAPLNISDARDEARFEVAPRGGRLAPGARANVAVEFVPLEGQAYATKLPLRVANSAKTHMICLQGVGVHPRVAFDPPRALLGPVLPGAPWARAIVAMRNDGAVPIEVFSLDFDAQYGAEERALAVARGYDERDVLRVPPRQPGEGL 876 G++ A+++ DFG+V+ G + + F V NTG A S+ DK L GFA++P+RV RLPE TF AR+ +GP V L + VKNGP +L+ +A V VP + + A L+FG VVVGRS Q N PV +W LK P+ ARD F + P GG L PG R N+ VEF+PLEG+ Y K+P++++++ KT I QG G RV+FDPP A LGPVLP +P IV MRN+ +EV+SLDFD Q+ EE L A GY + D LR+P R PG GL Sbjct: 1570 GFLLAQYILDFGNVVTGTHRVKKFVVTNTGHVPA-SFQVDKNLALSRGFAIDPERVVRLPEKKGVEFNVTFTARKNGRHGPHGVNLLLDVKNGPPSLVTFKANVTVPDLVLLADNLDFGKVVVGRSHVVHSQFFNNSPVVVEWALKKPMG--SARDVGYFRMEPTGGLLHPGTRCNIKVEFMPLEGRLYHVKVPVKISSNPKTRSITCQGEGSELRVSFDPPMAELGPVLPCSPPIERIVTMRNESDHAVEVYSLDFDTQFKTEEDILRDASGYGDDDYLRLPLRLPGTGL 1857
BLAST of jgi.p|Trimin1|130991 vs. uniprot
Match: A0A485LSA9_9STRA (Aste57867_25117 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSA9_9STRA) HSP 1 Score: 229 bits (583), Expect = 2.410e-64 Identity = 123/291 (42.27%), Postives = 176/291 (60.48%), Query Frame = 1 Query: 4 GYVAARHVADFGHVICGATKKRTFRVVNTGRAGAVSWAFDKALLAGSGFALEPDRVARLPEGAAASVTATFQARRAFENGPREVALPIAVKNGPATLLVLRACVAVPAVAVSAALLEFGDVVVGRSCTSCLQLHNPGPVPADWELKAPLNISDARDEARFEVAPRGGRLAPGARANVAVEFVPLEGQAYATKLPLRVANSAKTHMICLQGVGVHPRVAFDPPRALLGPVLPGAPWARAIVAMRNDGAVPIEVFSLDFDAQYGAEERALAVARGYDERDVLRVPPRQPGEGL 876 G++ ++++ DFG+V+ G + + F + NTG+ S+ DK L GF++EP+RV RLPE + T TFQAR+ +G V + + VKNGP++LL L+A V VP + S LEFG V+VGRS Q HN PV +W LK P+ S RD F + P+ G L PG R N+ +EF+P+EG+ + K+P+++ + +T I G G RV+F PP A LGP+LP A ++ M+N+ IEV+SLDFD QY EE L A GY + D+LR+P R PG+ L Sbjct: 1868 GFILSQYILDFGNVVSGTHRVKKFLLTNTGQV-PTSFQIDKNLALSRGFSIEPERVVRLPEKKSIEFTVTFQARKNGRHGAHGVNIVLDVKNGPSSLLTLKANVTVPDIVFSQEALEFGQVLVGRSHVMHTQFHNTSPVCVEWSLKKPIGSS--RDVGYFRMEPQSGLLHPGTRCNLRIEFIPVEGRLFHVKVPVKINANPRTRAISCSGEGTELRVSFAPPMAELGPLLPFATPVERLITMKNESDYAIEVYSLDFDTQYKDEEEVLRNASGYSDDDLLRLPLRLPGDPL 2155
BLAST of jgi.p|Trimin1|130991 vs. uniprot
Match: A0A8J2SKS6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SKS6_9STRA) HSP 1 Score: 228 bits (582), Expect = 3.280e-64 Identity = 124/291 (42.61%), Postives = 176/291 (60.48%), Query Frame = 1 Query: 7 YVAARHVADFGHVICGATKKRTFRVVNTGRAGAVSWAFDKALLAGSGFALEPDRVARLPEGAAASVTATFQARRAFENGPREVALPIAVKNGPATLLVLRACVAVPAVAVSAALLEFGDVVVGRSCTSCLQLHNPGPVPADWELKAPLNISDARDEARFEVAPRGGRLAPGARANVAVEFVPLEGQAYATKLPLRVANSAKTHMICLQGVGVHPRVAFDPPRALLGPVLPGAPWARAIVAMRNDGAVPIEVFSLDFDAQYGAEERALAVARGYD-ERDVLRVPPRQPGEGL 876 +V A H+ DF HV+ GATKKR F + N +G +SW+ DK LL +GF+++P++ L EG A + F+A++ G RE+ LPI +NGP T++VLRA + VP V S LEFGDV G T+ +QLHN PVPA+W+ KAPL ARD RF + PR G L P + NVAVEF P++ + + +LPL+VANS + + G G+ ++ F+P +GP+LP + V +RN P+EVFSLDFD + EE L D + +++R+P R+PG L Sbjct: 1442 FVLAWHLCDFKHVVSGATKKRKFLIKNDSESGRLSWSVDKKLLTNTGFSVDPEKFV-LAEGEATTFEVNFKAQKNLPLGDRELRLPITQRNGPVTMVVLRASICVPEVVASHDALEFGDVWTGCGRTAYVQLHNVSPVPAEWDFKAPLG--KARDAHRFTLTPRSGVLKPSEKVNVAVEFAPVDDRPCSLRLPLKVANSTSSSTLLFTGKGIAAKLKFEPSLVEVGPILPFSDIVSGAVTLRNASDRPVEVFSLDFDTDFMTEEEQLRERDDLDWDNNLIRLPVREPGSQL 1729
BLAST of jgi.p|Trimin1|130991 vs. uniprot
Match: A0A397B3D7_9STRA (MSP domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397B3D7_9STRA) HSP 1 Score: 227 bits (579), Expect = 8.030e-64 Identity = 128/292 (43.84%), Postives = 178/292 (60.96%), Query Frame = 1 Query: 4 GYVAARHVADFGHVICGATKKRTFRVVNTGRAGAVSWAFDKALLAGSGFALEPDRVARLPEGAAASVTATFQARRAFENGPREVALPIAVKNGPATLLVLRACVAVPAVAVSAALLEFGDVVVGRSCTSCLQLHNPGPVPADWELKAPLNISDARDEARFEVAPRGGRLAPGARANVAVEFVPLEGQAYATKLPLRVANSAKTHMICLQGVGVHPRVAFDPPRALLGPVLP-GAPWARAIVAMRNDGAVPIEVFSLDFDAQYGAEERALAVARGYDERDVLRVPPRQPGEGL 876 G++ ++++ DFG+V+ G + + F + NTG+ S+ DK + GF++EP+RV RL E + T TFQAR+ +G + + VKNGP +LL L+A V VP +A+S LE+G VVVGRS Q HN PV +W LK P+ S RD F + P+GG L PG R NV +EF+PLEG+ Y K+P+++ + +T I G G RV+F+PP A LGP+LP G P R I M+N+ IEV+SLDFD QY EE L A GY + ++LR+P R PGE L Sbjct: 1544 GFILSQYILDFGNVVSGTHRVKKFLLTNTGQV-PTSFQIDKNVALAKGFSIEPERVVRLLEKKSIEFTVTFQARKNGRHGTHGANIFLEVKNGPCSLLTLKANVTVPDIAISQDSLEYGQVVVGRSLVMHTQFHNTSPVGVEWSLKKPIGSS--RDVGYFRMEPQGGVLHPGTRCNVRIEFIPLEGRLYHVKVPVKINANPRTRAISCSGEGTELRVSFNPPMAELGPLLPFGTPVERHIT-MKNESDYAIEVYSLDFDHQYKDEEDVLRNASGYSDDELLRLPLRLPGEPL 1831 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|130991 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_2817 ID=mRNA_2817|Name=jgi.p|Trimin1|130991|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=876bp|location=Sequence derived from alignment at Contig_8:940691..942526+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CATGGCTACGTGGCGGCGCGGCACGTCGCCGACTTCGGCCACGTCATCTGback to top protein sequence of jgi.p|Trimin1|130991 >Trimin1|130991|gw1.8.30.1 ID=Trimin1|130991|gw1.8.30.1|Name=jgi.p|Trimin1|130991|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=292bp HGYVAARHVADFGHVICGATKKRTFRVVNTGRAGAVSWAFDKALLAGSGFback to top mRNA from alignment at Contig_8:940691..942526+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_2817 ID=mRNA_2817|Name=jgi.p|Trimin1|130991|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1836bp|location=Sequence derived from alignment at Contig_8:940691..942526+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_8:940691..942526+ >mRNA_2817 ID=mRNA_2817|Name=jgi.p|Trimin1|130991|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=876bp|location=Sequence derived from alignment at Contig_8:940691..942526+ (Tribonema minus UTEX_B_3156 )back to top |