mRNA_2637 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|150974 vs. uniprot
Match: A0A836C9S6_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9S6_9STRA) HSP 1 Score: 504 bits (1298), Expect = 1.360e-180 Identity = 250/250 (100.00%), Postives = 250/250 (100.00%), Query Frame = 1 Query: 1 QFGLSFTPGGLLFPYQLGICDAFMEAGFLTPEVPIAGSSAGALTTVVVGAGLDLREVLEETEALCEDCRTGGTRGRLRSVLVASLAKMLPEDVHERLNARAAPASVGYTALLPLPSGTLVSEFTSKEDVIGCLLASCHVPWWFNGSPVGRVRGQFVVDGFFGTPRGNFGAFPVPRAARTLRVSAFPSAIARIDAAHESEVIAPDLLGEGAFAADMLVMALNPGSTEQLTKLFEDGRKTGEIWLQKYGDMY 750 QFGLSFTPGGLLFPYQLGICDAFMEAGFLTPEVPIAGSSAGALTTVVVGAGLDLREVLEETEALCEDCRTGGTRGRLRSVLVASLAKMLPEDVHERLNARAAPASVGYTALLPLPSGTLVSEFTSKEDVIGCLLASCHVPWWFNGSPVGRVRGQFVVDGFFGTPRGNFGAFPVPRAARTLRVSAFPSAIARIDAAHESEVIAPDLLGEGAFAADMLVMALNPGSTEQLTKLFEDGRKTGEIWLQKYGDMY Sbjct: 1 QFGLSFTPGGLLFPYQLGICDAFMEAGFLTPEVPIAGSSAGALTTVVVGAGLDLREVLEETEALCEDCRTGGTRGRLRSVLVASLAKMLPEDVHERLNARAAPASVGYTALLPLPSGTLVSEFTSKEDVIGCLLASCHVPWWFNGSPVGRVRGQFVVDGFFGTPRGNFGAFPVPRAARTLRVSAFPSAIARIDAAHESEVIAPDLLGEGAFAADMLVMALNPGSTEQLTKLFEDGRKTGEIWLQKYGDMY 250
BLAST of jgi.p|Trimin1|150974 vs. uniprot
Match: A0A835YPA3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPA3_9STRA) HSP 1 Score: 271 bits (692), Expect = 5.680e-87 Identity = 134/251 (53.39%), Postives = 173/251 (68.92%), Query Frame = 1 Query: 7 GLSFTPGGLLFPYQLGICDAFMEAGFLTPEVPIAGSSAGALTTVVVGAGLDLREVLEETEALCEDCRTGGTRGRLRSVLVASLAKMLPEDVHERLNARAAPASVGY---TALLPLPSGTLVSEFTSKEDVIGCLLASCHVPWWFNGSPVGRVRGQFVVDGFFGTPRGNFGAFPVPRAARTLRVSAFPSAIARIDAAHESEVIAPDLLGEGAFAADMLVMALNPGSTEQLTKLFEDGRKTGEIWLQKYGDMY 750 G SFTPGGLLFPYQ+GI A +EAG L P+ G SAG+LT V V +GL V+EE +ALC DCR GT RL L+ SL MLP DVH LNARA V Y TA L LP GT+ +E+ S+EDVI CLLASCHVP+W NG P VRG++ +DGFFGTP +FGA +P A T+RVSAFP+ ARI+A+ E +I+PDLLG AA M+ +A+NPGS +Q+ L++DG ++ ++WL ++G+ + Sbjct: 68 GFSFTPGGLLFPYQIGIAKALVEAGLLKDSTPLVGGSAGSLTAVTVASGLCTDAVMEEVQALCADCRAHGTGLRLHGALLKSLHAMLPRDVHATLNARAGACGVLYATVTAALSLPVGTVATEYESREDVIHCLLASCHVPFWLNGLPATSVRGRYAIDGFFGTPAKHFGAPDIPYAQHTVRVSAFPAQFARIEASTEGGLISPDLLGSRRSAAAMMSLAMNPGSAQQVKDLYDDGLQSAQLWLDQHGERF 318
BLAST of jgi.p|Trimin1|150974 vs. uniprot
Match: D8LBD4_ECTSI (PNPLA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBD4_ECTSI) HSP 1 Score: 210 bits (534), Expect = 1.500e-63 Identity = 115/255 (45.10%), Postives = 150/255 (58.82%), Query Frame = 1 Query: 1 QFGLSFTPGGLLFPYQLGICDAFMEAGFLTPEVPIAGSSAGALTTVVVGAGLDLREVLEETEALCEDCRTGGTRGRLRSVLVASLAKMLPEDVHERLNARAAPASVGYTAL-LP-LPSGTLVSEFTSKEDVIGCLLASCHVPWWFNGSPVGRVRGQFVVDGFFGTPRGNFGAFPVPRAARTLRVSAFPSAIARIDAAHESEVIAPDLLGE---GAFAADMLVMALNPGSTEQLTKLFEDGRKTGEIWLQKYGDMY 750 Q G SFTPGGLLFPY LG+ GFL+ + P+AGSSAGAL VVVG GL + E + + +DC GG RLR+++ L LPED HE LN R +VG T L P L VS F S+ D+I LL SCHVP+WF+G P +VRGQ VDGFF PR FGA +P A +R++ FP+ + + ++I+PDLL G F ++L ALNPG+ +LF G ++G +W KYG+ Y Sbjct: 43 QIGFSFTPGGLLFPYHLGVAKCLEMEGFLSNDTPLAGSSAGALAAVVVGCGLSIDTAAELSGRVFDDCSDGGAAFRLRNIVQKGLDGALPEDAHEILNNREGAVTVGITQLGFPSLKKSVFVSNFESRADLIEVLLGSCHVPFWFSGQPYMQVRGQPTVDGFFAMPRAQFGAPDIPTADEVVRITVFPTTSVPMQSDKPGDLISPDLLDRYQSGRFM-ELLNYALNPGNDFVQEELFNAGFESGGVWCDKYGEDY 296
BLAST of jgi.p|Trimin1|150974 vs. uniprot
Match: A0A6S9HSH1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HSH1_HETAK) HSP 1 Score: 177 bits (449), Expect = 3.000e-50 Identity = 106/257 (41.25%), Postives = 144/257 (56.03%), Query Frame = 1 Query: 1 QFGLSFTPGGLLFPYQLGICDAFMEAGFLTPEVPIAGSSAGALTTVVVGAGLDLREVLEETEALCEDCRTGGTRGRLRSVLVASLAKMLPEDVHERLNARAAPASVGYTAL----LPLPSGTLVSEFTSKEDVIGCLLASCHVPWWFNGSPVGRVRGQFVVDGFFGTPRGNFGAFPVP--RAARTLRVSAFPSAIARIDAAHESEVIAPDLLGEGAFAA---DMLVMALNPGSTEQLTKLFEDGRKTGEIWLQKYGD 744 +FG SF+PGGLLFPYQ+GI +EAG +T + P+ G+SAGAL V +GAGLD+ + L + R G R + L L LPEDVHE LN R V T L LP P G ++ + SK DVI L+ASC+VP W +P+ R RG+ +DGFFG P+G FGA + RA T+RV P A + +VI+P + + +F D+L ALNP E+L +L+ G++ G W +GD Sbjct: 61 RFGFSFSPGGLLFPYQIGIAKYLLEAGLITEDTPLCGASAGALCAVALGAGLDIDVLFAACGDLMAELRPKGARHHIWHALRRQLETFLPEDVHEVLNRRPGGVGVAVTFLVGGYLPYPRGEVIFHWRSKADVIEVLMASCNVPMWTTWTPMVRCRGRPAMDGFFGQPKGCFGAAALHPHRARHTVRVLPGPQADVDVRCTIPGDVISPSV--DPSFTQTFKDLLQDALNPYGQERLEELYAQGQRDGARW-HAHGD 314
BLAST of jgi.p|Trimin1|150974 vs. uniprot
Match: A0A6S9J7B1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9J7B1_HETAK) HSP 1 Score: 171 bits (434), Expect = 1.930e-48 Identity = 102/250 (40.80%), Postives = 140/250 (56.00%), Query Frame = 1 Query: 1 QFGLSFTPGGLLFPYQLGICDAFMEAGFLTPEVPIAGSSAGALTTVVVGAGLDLREVLEET-EALCEDCRTGGTRGRLRSVLVASLAKMLPEDVHERLNARAAPASVGYTALLPLPSGTLVSEFTSKEDVIGCLLASCHVPWWFNGSPVGRVRGQFVVDGFFGTPRGNFGAFPV--PRAARTLRVSAFPSAIARIDAAHESEVIAPDLLGEGAFA-ADMLVMALNPGSTEQLTKLFEDGRKTGEIWLQKY 738 +FG +F+PGGLLFPYQLG+ A +E G LT + PI+G+SAGAL +VV A +D E L+ E L E GG + +R L + L +LP DV + LN R V T + PLP G +V+EF S+ DV+ LLASC VP+WF P RG+ VDGFF PR FG + AA T+RV FPSA + + ++++PD+ E +A ++L +AL+ L L G W K+ Sbjct: 77 RFGFAFSPGGLLFPYQLGVAKALVETGLLTDKTPISGASAGALVSVVAAANIDFAEALDGCGEILAECAAKGGAQYNIRGALESQLNDLLPLDVADLLNNRPGGCGVVVTEMSPLPRGRVVTEFRSRRDVVELLLASCCVPFWFTPGPAIMCRGRPHVDGFFAFPREAFGCPDLGPAGAATTVRVLPFPSASLGMQSTVPGDILSPDIDPEFPYAFQELLALALSTYDGALLRGLHGAGEAHAGRWAAKH 326
BLAST of jgi.p|Trimin1|150974 vs. uniprot
Match: A0A8J5XDS6_DIALT (PNPLA domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XDS6_DIALT) HSP 1 Score: 157 bits (398), Expect = 2.330e-42 Identity = 97/254 (38.19%), Postives = 142/254 (55.91%), Query Frame = 1 Query: 13 SFTPGGLLFPYQLGICDAFMEAGFLTPEV-PIAGSSAGALTTVVVGAGLDLREVLEETEALCEDCRTGGTRGRLRSVLVASLAKMLPEDVHERLNARAAPASVGYTALLPLPSGTLVSEFTSKEDVIGCLLASCHVPWWFNGSPVGRVRGQFVVDGFFGTPRGNFGAFPVPRAARTLRVSAFPS----AIARIDAAHESEVIAPDLLGEGAFAA------DMLVMALNPGSTEQLTKLFEDGRKTGEIWLQKYG 741 SF+ GGLLFPYQLG+ + ++G + P V P++GSSAG+L V+ GLDL V+ EA+ DCR GGT GRL S+L L LP D ERL+ +V Y +LPLP + F ++D+ L ASC+ P++ +P+ R RG +DG+F PR P+ A RT+ VSAFP+ + + AH+ +I P++ +G F + L AL S + +LFE GR+ G +W +++G Sbjct: 136 SFSVGGLLFPYQLGVGVSLTDSGHIVPGVTPLSGSSAGSLVATVLALGLDLELVMARLEAILADCRAGGTAGRLGSILERELVSALPADCAERLSNGC--LTVAYMRMLPLPRAVRCAAFKDRDDLFEVLRASCNWPFFLARAPLVRCRGNLSLDGYFVAPRTLGCLVPMHNAHRTVAVSAFPAFAVPTMRELVPAHD--LIHPNM--DGRFPGPPEGLPEWLQSALQAYSPARAHELFEMGRRHGSLWAERHG 383
BLAST of jgi.p|Trimin1|150974 vs. uniprot
Match: A0A383W6K6_TETOB (PNPLA domain-containing protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W6K6_TETOB) HSP 1 Score: 152 bits (385), Expect = 9.310e-41 Identity = 95/250 (38.00%), Postives = 133/250 (53.20%), Query Frame = 1 Query: 1 QFGLSFTPGGLLFPYQLGICDAFMEAGFLTPEVPIAGSSAGALTTVVVGAGLDLREVLEETEALCEDCRTGGTRGRLRSVLVASLAKMLPEDVHERLNARAAPASVGYTALLPLPSGTLVSEFTSKEDVIGCLLASCHVPWWFNGSPVGRVRGQFVVDGFFGTPRGNFGAFP-VPRAARTLRVSAFPSA-IARIDAAHESEVIAPDLLGEGAFAAD-MLVMALNPGSTEQLTKLFEDGRKTGEIWLQKYG 741 + F+ GGLLFPY LG+ + G +TP+ +AG+SAG+L + +GL L + E L +DCR GTR RL+ VL L ++LP+D+ +R + + V T L P + LVS F+ +ED++G LL SCH+PW+F+GS R DG F NF P VP A T R+ PS +ARI S I+PD E ++ ML A P EQL L E G++ W+Q+ G Sbjct: 82 KLAFGFSAGGLLFPYYLGVAEELQRLGVMTPDSQLAGASAGSLIVACLKSGLPLATITEACFQLADDCRRNGTRHRLKLVLERVLREVLPQDIAQRCSGQ---VHVAVTRLTPGVTPRLVSRFSDREDLLGALLTSCHIPWYFDGSLFTSFRNTPCFDGGFT----NF--LPDVPGADATCRICCLPSKQLARIG----SIAISPDAFAEWPYSLQQMLGWAFEPADEEQLRVLIECGKRDALAWVQQSG 318
BLAST of jgi.p|Trimin1|150974 vs. uniprot
Match: A0A835LUE2_9MAGN (Patatin n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835LUE2_9MAGN) HSP 1 Score: 149 bits (377), Expect = 1.700e-39 Identity = 92/244 (37.70%), Postives = 125/244 (51.23%), Query Frame = 1 Query: 7 GLSFTPGGLLFPYQLGICDAFMEAGFLTPEVPIAGSSAGALTTVVVGAGLDLREVLEETEALCEDCRTGGTRGRLRSVLVASLAKMLPEDVHERLNARAAPASVGYTALLPLPSGTLVSEFTSKEDVIGCLLASCHVPWWFNGSPVGRVRGQFVVDGFFGTPRGNFGAFPVPRAARTLRVSAFPSAIARIDAAHESEVIAPDLLGEG-AFAADMLVMALNPGSTEQLTKLFEDGRKTGEIWLQK 735 G SF+ GLLFPY LG+ +E G++ P+AGSSAGA+ V+ +G ++E LE T+ L EDCR GT RL +VL L K LP+DVH R N R V T +L P G LV +F SKED+I + S +P + P R + +DG G P A++T+RV AFP+ + E I+PD E A A ++ AL P L +LFE G +W + Sbjct: 129 GFSFSAAGLLFPYHLGVAHLLIEKGYIKDTTPLAGSSAGAIVCAVIASGSSMKEALEATKVLAEDCRLRGTAFRLGAVLRELLVKFLPDDVHTRSNGR---VRVAVTQILWRPRGLLVDQFDSKEDLINAVFTSSFIPGYLAPRPATLFRNRVCIDG------GVTLFMPPTSASKTVRVCAFPAERLGL----EGIGISPDCNPENRASARELFNWALEPAEDHVLDRLFELGYLDASVWADQ 359
BLAST of jgi.p|Trimin1|150974 vs. uniprot
Match: UPI00053C60AA (patanin-like phospholipase domain-containing protein isoform X2 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C60AA) HSP 1 Score: 149 bits (376), Expect = 2.580e-39 Identity = 89/247 (36.03%), Postives = 127/247 (51.42%), Query Frame = 1 Query: 7 GLSFTPGGLLFPYQLGICDAFMEAGFLTPEVPIAGSSAGALTTVVVGAGLDLREVLEETEALCEDCRTGGTRGRLRSVLVASLAKMLPEDVHERLNARAAPASVGYTALLPLPSGTLVSEFTSKEDVIGCLLASCHVPWWFNGSPVGRVRGQFVVDG---FFGTPRGNFGAFPVPRAARTLRVSAFPSAIARIDAAHESEVIAPDLLGEGAFAADMLV-MALNPGSTEQLTKLFEDGRKTGEIWLQK 735 G SF+ GGLLFPY LG+ +E G++ P+AGSSAGA+ V+ GL +++ LE T+ + +DCR GT RL ++L L ++LP+D H N R V T + P G LV +F SK D+I L S +P +F+ SP R + +DG FF P A++T+RVSAFP++ + + I+PD E L+ A P E L +LFE G W +K Sbjct: 124 GFSFSVGGLLFPYHLGVAQFLIEKGYIKETTPLAGSSAGAIICAVIACGLSMQKALEATKTIADDCRRKGTAFRLGALLRDCLEELLPDDAHTSCNGR---IRVAVTQITWRPRGLLVDQFDSKGDLINALFTSSFIPGYFSASPATVFRNRLCIDGGLTFF---------MPPTSASKTIRVSAFPASTFGV----KGIAISPDCNPENRATPRQLINWAFEPAEDEALDRLFELGYADAASWAEK 354
BLAST of jgi.p|Trimin1|150974 vs. uniprot
Match: A0A835THB5_CHLIN (PNPLA domain-containing protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A835THB5_CHLIN) HSP 1 Score: 145 bits (367), Expect = 3.150e-39 Identity = 91/243 (37.45%), Postives = 119/243 (48.97%), Query Frame = 1 Query: 1 QFGLSFTPGGLLFPYQLGICDAFMEAGFLTPEVPIAGSSAGALTTVVVGAGLDLREVLEETEALCEDCRTGGTRGRLRSVLVASLAKMLPEDVHERLNARAAPASVGYTALLPLPSGTLVSEFTSKEDVIGCLLASCHVPWWFNGSPVGRVRGQFVVDGFFGTPRGNFGAFPVPRAARTLRVSAFPSAIARIDAAHESEVIAPDLLGEGAF-AADMLVMALNPGSTEQLTKLFEDGRKTGEIW 726 +G F+ GGLLFPY LGI + L PE P+AG+SAG++ V +GL E+L L DCR GGTR RL+SVL L LP+D+HER N R A + T L P + +S F S+ DVI LL S H+P+WF+GS R DG G P RVS FPS + + ++PD + + ML A P S E L +L E G++ W Sbjct: 10 DYGFGFSAGGLLFPYFLGISEQLQSMNVLLPETPVAGASAGSIIAVCAKSGLSEEELLVAFLDLARDCRQGGTRTRLKSVLRRVLETALPDDIHERCNGR---AHLAVTRLWPEFTPQTISSFRSRSDVIDTLLTSSHIPYWFDGSLFTMYRSGIYFDG------GITNFIPSTPTDVCYRVSCFPSQQLKT---FKDISLSPDTFEQWPYDMGTMLGWAFEPASEEMLLRLVEKGKRDARSW 240 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|150974 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_2637 ID=mRNA_2637|Name=jgi.p|Trimin1|150974|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=750bp|location=Sequence derived from alignment at Contig_7:1614587..1618077- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CAGTTTGGTCTCAGCTTTACTCCTGGCGGGCTCTTATTTCCGTACCAATTback to top protein sequence of jgi.p|Trimin1|150974 >Trimin1|150974|gw1.7.276.1 ID=Trimin1|150974|gw1.7.276.1|Name=jgi.p|Trimin1|150974|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=250bp QFGLSFTPGGLLFPYQLGICDAFMEAGFLTPEVPIAGSSAGALTTVVVGAback to top mRNA from alignment at Contig_7:1614587..1618077- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_2637 ID=mRNA_2637|Name=jgi.p|Trimin1|150974|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3491bp|location=Sequence derived from alignment at Contig_7:1614587..1618077- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_7:1614587..1618077- >mRNA_2637 ID=mRNA_2637|Name=jgi.p|Trimin1|150974|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=750bp|location=Sequence derived from alignment at Contig_7:1614587..1618077- (Tribonema minus UTEX_B_3156 )back to top |