mRNA_2503 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|85562 vs. uniprot
Match: A0A835YVI1_9STRA (Inositol-1-monophosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVI1_9STRA) HSP 1 Score: 597 bits (1538), Expect = 1.640e-214 Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 1
Query: 61 MIRGAEAIMADGLSRKRHRKVPEALTQRLGGVEAGLAERMETATELALAAGEAIKLVIDQAKDIENKGANDLVTATDKANEELIFQGLRRAFPGDEFIGEESSAAAGEIAALTAAPTWIVDPVDGTTNFVHGFPMTCVSIGFARGGRVDLGVIYNPCSGEMYQAIRGHGAWLNGKRIRASGSTTLAGSLVITEYGCQREEAAMTRMMDCTRAVLRKCRNLRQVGSGALDLAFVACGRFDAVYSGVAGEGWKPWDYAAGLVMAEEAGATMLSVEGQPFDLFGDSVLCCATRELAMEIAEIVRTAQA 975
MIRGAEAIMADGLSRKRHRKVPEALTQRLGGVEAGLAERMETATELALAAGEAIKLVIDQAKDIENKGANDLVTATDKANEELIFQGLRRAFPGDEFIGEESSAAAGEIAALTAAPTWIVDPVDGTTNFVHGFPMTCVSIGFARGGRVDLGVIYNPCSGEMYQAIRGHGAWLNGKRIRASGSTTLAGSLVITEYGCQREEAAMTRMMDCTRAVLRKCRNLRQVGSGALDLAFVACGRFDAVYSGVAGEGWKPWDYAAGLVMAEEAGATMLSVEGQPFDLFGDSVLCCATRELAMEIAEIVRTAQA
Sbjct: 1 MIRGAEAIMADGLSRKRHRKVPEALTQRLGGVEAGLAERMETATELALAAGEAIKLVIDQAKDIENKGANDLVTATDKANEELIFQGLRRAFPGDEFIGEESSAAAGEIAALTAAPTWIVDPVDGTTNFVHGFPMTCVSIGFARGGRVDLGVIYNPCSGEMYQAIRGHGAWLNGKRIRASGSTTLAGSLVITEYGCQREEAAMTRMMDCTRAVLRKCRNLRQVGSGALDLAFVACGRFDAVYSGVAGEGWKPWDYAAGLVMAEEAGATMLSVEGQPFDLFGDSVLCCATRELAMEIAEIVRTAQA 305
BLAST of jgi.p|Trimin1|85562 vs. uniprot
Match: D8LTH8_ECTSI (Inositol-1-monophosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTH8_ECTSI) HSP 1 Score: 343 bits (881), Expect = 2.840e-114 Identity = 172/276 (62.32%), Postives = 214/276 (77.54%), Query Frame = 1
Query: 139 QRLGGVEAGLAERMETATELALAAGEAIKLVIDQAKD-IENKGANDLVTATDKANEELIFQGLRRAFPGDEFIGEESSAAAGEIAALTAAPTWIVDPVDGTTNFVHGFPMTCVSIGFARGGRVDLGVIYNPCSGEMYQAIRGHGAWLNGKRIRASGSTTLAGSLVITEYGCQREEAAMTRMMDCTRAVLRKCRNLRQVGSGALDLAFVACGRFDAVYSGVAGEGWKPWDYAAGLVMAEEAGATMLSVEGQPFDLFGDSVLCCATRELAMEIAEIVR 963
Q L E+ L ER++ ATE+AL AG A+KLVI+ K+ I +KGA DLVTATDKANE+LIF +R++FPGD IGEESSA AG IAALT PTWIVDPVDGTTNFVHGFPMTCVSIGF RG ++++GV+Y+PC+ E+YQA+RG GA++NG++ +S T L ++VITEYG QR+ A+ +MM+ T VLRKCR LRQVGSG LDL +V CGR DA+YSGVAGEGW+PWDYAAG + EEAG + V+G PF +F SVL A+RELA E+ +R
Sbjct: 51 QELSKCESALLERLKLATEVALQAGAAMKLVINTKKEGIVHKGATDLVTATDKANEKLIFDAVRKSFPGDVLIGEESSADAGSIAALTDEPTWIVDPVDGTTNFVHGFPMTCVSIGFGRGSKMEVGVVYDPCADELYQAVRGFGAFVNGRKASSSDCTELGNAVVITEYGYQRDPVAVRKMMEVTEKVLRKCRGLRQVGSGCLDLCWVGCGRVDALYSGVAGEGWQPWDYAAGWLFIEEAGGVVKQVDGSPFHVFSKSVLSAASRELADELVSTIR 326
BLAST of jgi.p|Trimin1|85562 vs. uniprot
Match: A0A7S1TRK1_9STRA (Inositol-1-monophosphatase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRK1_9STRA) HSP 1 Score: 265 bits (678), Expect = 1.180e-84 Identity = 135/247 (54.66%), Postives = 169/247 (68.42%), Query Frame = 1
Query: 241 AKDIENKGANDLVTATDKANEELIFQGLRRAFPGDEFIGEESSAAAGEIAALTAAPTWIVDPVDGTTNFVHGFPMTCVSIGFARGGRVDLGVIYNPCSGEMYQAIRGHGAWLNGKRIRASGSTTLAGSLVITEYGCQREEAAMTRMMDCTRAVLRKCRNLRQVGSGALDLAFVACGRFDAVYSGVAGEG----WKPWDYAAGLVMAEEAGATMLSVEGQPFDLFGDSVLCCATRELAMEIAEIVRTA 969
AK I +KG DLVTATDKANE+LIF+GLR AFP FIGEESSA +G +AALT PTWIVDP+DGTTNFV G P+TCVSIG GG+ LGV+YNPCS E+Y ++GHG++LNG R++ + TLA ++VI EYG +RE+ + M + K R LRQ GSGALD+ FVA GR DAVY+GVA G W PWDY AG+V+ EEAG + G+ FDLF CA + E+ ++ +A
Sbjct: 2 AKKITSKGVADLVTATDKANEDLIFKGLREAFPDHSFIGEESSAESGAVAALTDTPTWIVDPIDGTTNFVSGIPLTCVSIGLCVGGKPVLGVVYNPCSDELYVGLKGHGSYLNGVRLQVGDTDTLADAVVIQEYGYEREDGILALMSTSAALLGNKVRALRQFGSGALDICFVAAGRCDAVYAGVAHSGLCSAWWPWDYCAGIVIGEEAGCVFKNFAGEDFDLFYRKNFICAAPGIMEELRAVLNSA 248
BLAST of jgi.p|Trimin1|85562 vs. uniprot
Match: A0A7R9U8Z7_9STRA (Inositol-1-monophosphatase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8Z7_9STRA) HSP 1 Score: 267 bits (682), Expect = 2.590e-84 Identity = 153/314 (48.73%), Postives = 194/314 (61.78%), Query Frame = 1
Query: 43 AGAAVLMIRGAEAIMADGLSRKRHR-KVPEALTQRLGGVEAGLAERMETATELALAAGEAIKLVIDQAKDIENKGANDLVTATDKANEELIFQGLRRAFPGDEFIGEESSAAAGEIAALTAAPTWIVDPVDGTTNFVHGFPMTCVSIGFARGGRVDLGVIYNPCSGEMYQAIRGHGAWLNGKRIRASGSTTLAGSLVITEYGCQREEAAMTRMMDCTRAVLRKCRNLRQVGSGALDLAFVACGRFDAVYSGVAGEG----WKPWDYAAGLVMAEEAGATMLSVEGQPFDLFGDSVLCCATRELAMEIAEIVRTA 969
AG A L G A L R+R R ++P AL + +G ++ E +E A ELA AG + I + K I +KG D+VT TDKANEELIF+GLRR FP D FIGEESS+ A L TWIVDP+DGTTNFV G P+TCVSIG GGR LGV++NPC EMY +RGHGA+LNG+R++ S +T L ++VI EYG +RE+ + M + K R LRQ GSG LD+ +VA GR DAVY+GVA EG W PWDY AG+V+ EEAGA +G FD+F C T + E+ ++ A
Sbjct: 7 AGIAALAAFGLLAAATATLWRRRRRSRLPSAL-RAVGALQ----EELEAAVELAELAGARLNAAISETKRIASKGVADIVTETDKANEELIFEGLRRRFPADAFIGEESSSGGVSAANLGPNKTWIVDPIDGTTNFVAGLPLTCVSIGLCVGGRPVLGVVFNPCMDEMYIGVRGHGAYLNGQRLKVSDTTRLDEAVVIQEYGYEREDGILALMSTSAALLGNKVRALRQFGSGCLDICWVAAGRCDAVYAGVAHEGLCKGWMPWDYCAGVVIGEEAGAVFKKFDGTDFDIFYRKDFLCCTPGVLDELRGVLNQA 315
BLAST of jgi.p|Trimin1|85562 vs. uniprot
Match: W7TWA1_9STRA (Inositol-1-monophosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TWA1_9STRA) HSP 1 Score: 245 bits (625), Expect = 1.350e-75 Identity = 136/294 (46.26%), Postives = 190/294 (64.63%), Query Frame = 1
Query: 97 LSRKRHRKVPEALTQRLGGVEAGLAERMETATELALAAGEAIKLVIDQ---AKDIENKGANDLVTATDKANEELIFQGLRRAFPGDEFIGEESSAAAGEIAALTAAPTWIVDPVDGTTNFVHGFPMTCVSIGFARGGRVDLGVIYNPCSGEMYQAIRGHGAWLNGKRIRASGST-TLAGSLVITEYGCQREEAAMTRMMDCTRAVLR-KCRNLRQVGSGALDLAFVACGRFDAVYSGVAGEGWKPWDYAAGLVMAEEAGATMLSVEGQPFDLFGDSVLCCATRELAMEIAEIVR 963
L K ++P AL ++ A + AT+ AL+AG +K ++ +K + +KG DLVT TDK NE I LR+ FP IGEE ++ AG I LT APTWI+DP+DGTTNFVHG P++CVSI A V +GVIY+P E++ A RG G++LNGK ++ +G T L +++I E+G +R EA + +++ + +LR + LRQ GSG LDLA+VA GR D VY GVAG+GWKPWDYAAG ++A EAGATM +++GQ FD+FG S++C A +A ++ R
Sbjct: 39 LKGKAKARIPSAL------FKSEWAREIHIATQAALSAGVNLKACSEKDPTSKCVSHKGEIDLVTETDKENEREIVALLRKHFPSYLVIGEEEASDAGAIPPLTRAPTWIIDPIDGTTNFVHGCPLSCVSIALAVDKAVVVGVIYDPFKDELFLAARGRGSYLNGKPLQTAGGTHELHQAVIIQEFGYERSEAGIRKLLQVSERLLRGNVQALRQFGSGVLDLAYVAAGRVDGVYCGVAGDGWKPWDYAAGSLVATEAGATMSTLQGQEFDVFGSSMVCAANESIARKLVGAAR 326
BLAST of jgi.p|Trimin1|85562 vs. uniprot
Match: A0A6H5KD97_9PHAE (Inositol-1-monophosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD97_9PHAE) HSP 1 Score: 239 bits (610), Expect = 1.890e-73 Identity = 133/276 (48.19%), Postives = 185/276 (67.03%), Query Frame = 1
Query: 169 AERMETATELALAAGEAI---KLVIDQ---AKD---IENKGANDLVTATDKANEELIFQGLRRAFPGDEFIGEESSAAAGEIAALTA--APTWIVDPVDGTTNFVHGFPMTCVSIGFARGGRVDLGVIYNPCSGEMYQAIRGHGAWLNGKRIRASGSTTLAGSLVITEYGCQREEAAMTRMMDCTRAVLRKCRNLRQVGSGALDLAFVACGRFDAVYSGVAGEGWKPWDYAAGLVMAEEAGATMLSVEGQPFDLFGDSVLCCATRELAMEIAEIVR 963
A RM AT LA AG+A+ K Q KD + KG +DLVT TD++NE LI +GL FP D F+GEE+SA G + + TW+VDP+DGTTNFVHGFP+TCVSIG A+G V +GV++NP + E+YQAI+G G++LNGKR+ S ++ + ++V+ EY REE ++ +M+D T A+ R +RQ G GA+DL F+A G DAV+ GVAG WKPWD+AAG+++A EAGA + + +G F L GD++L AT ELA + E+++
Sbjct: 43 ASRMLVATALAQEAGQAMLDAKAHCAQEGKGKDGGGVSYKGRHDLVTETDRSNEALIQRGLHEKFPEDHFLGEETSADRGGAPSELSNNVLTWVVDPIDGTTNFVHGFPVTCVSIGLAKGDEVVVGVVFNPFTQELYQAIKGGGSFLNGKRLEVSKTSAMEQAMVMAEYSSVREEESLRKMLDTTGAIAGAARAVRQTGCGAMDLCFLARGSVDAVFGGVAGV-WKPWDWAAGVLIATEAGAAISAGDGGDFGLMGDTMLGAATAELASSLREVLK 317
BLAST of jgi.p|Trimin1|85562 vs. uniprot
Match: K8Z378_NANGC (Myo-inositol-1(Or 4)-monophosphatase n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z378_NANGC) HSP 1 Score: 236 bits (601), Expect = 3.120e-70 Identity = 132/277 (47.65%), Postives = 182/277 (65.70%), Query Frame = 1
Query: 97 LSRKRHRKVPEALTQRLGGVEAGLAERMETATELALAAGEAIKLVIDQ---AKDIENKGANDLVTATDKANEELIFQGLRRAFPGDEFIGEESSAAAGEIAALTAAPTWIVDPVDGTTNFVHGFPMTCVSIGFARGGRVDLGVIYNPCSGEMYQAIRGHGAWLNGKRIRASGST-TLAGSLVITEYGCQREEAAMTRMMDCTRAVLR-KCRNLRQVGSGALDLAFVACGRFDAVYSGVAGEGWKPWDYAAGLVMAEEAGATMLSVEGQPFDLFGDSV 912
L K ++P AL ++ A + AT+ AL+AG +K ++ +K + +KG DLVT TDK NE I LR+ FP IGEE ++ AG I LT APTWI+DP+DGTTNFVHG P++CVSI A V +GVIY+P E++ A RG G++LNGK ++ +G T L +++I E+G +R EA + +++ + +LR + LRQ GSG LDLA+VA GR D VY GVAG+GWKPWDYAAG ++A EAGATM +++GQ FD+FG S+
Sbjct: 39 LKGKAKARIPSAL------FKSEWAREIHIATQAALSAGVNLKACSEKDPTSKCVSHKGEIDLVTETDKENEREIVALLRKHFPSYLVIGEEEASDAGAIPPLTRAPTWIIDPIDGTTNFVHGCPLSCVSIALAVDKAVVVGVIYDPFKDELFLAARGRGSYLNGKPLQTAGGTHELHQAVIIQEFGYERSEAGIRKLLQVSERLLRGNVQALRQFGSGVLDLAYVAAGRVDGVYCGVAGDGWKPWDYAAGSLVATEAGATMSTLQGQEFDVFGSSM 309
BLAST of jgi.p|Trimin1|85562 vs. uniprot
Match: A0A2K3DP54_CHLRE (Inositol-1-monophosphatase n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3DP54_CHLRE) HSP 1 Score: 218 bits (555), Expect = 2.580e-65 Identity = 129/262 (49.24%), Postives = 160/262 (61.07%), Query Frame = 1
Query: 178 METATELALAAGEAIKLVIDQAKDIENK-GANDLVTATDKANEELIFQGLRRAFPGDEFIGEESSAAAGEIAALTAAPTWIVDPVDGTTNFVHGFPMTCVSIGFARGGRVDLGVIYNPCSGEMYQAIRGHGAWLNGKRIRASGSTTLAGSLVITEYGCQREEAAMTRMMDCTRAVLRKCRNLRQVGSGALDLAFVACGRFDAVYSGVAGEGWKPWDYAAGLVMAEEAGATMLSVEGQPFDLFGDSVLCCATRELAMEIAEIV 960
+E A + A+AAG+ IK K +E K DLVTATDKA E+LIF +R AFP FIGEES+AAAG AALT APTW+VDP+DGTTNFVHGFP C SI G RV +GV+YNP GE++ A G GA LNG + S +T LAG+L+ TE G R+E + RA+ K R++R GS AL L VA GR DA Y G WD AAG +M EAG T+L G P+D+ VL TR+L +A ++
Sbjct: 16 LEVAIDAAVAAGDVIKGSFKGPKQVEEKLNHADLVTATDKAAEDLIFGRIRAAFPDHAFIGEESAAAAGGAAALTDAPTWMVDPLDGTTNFVHGFPFVCTSIALVVGRRVVVGVVYNPVLGELFAAAAGGGACLNGAPLATSAATELAGALMGTEVGTARDEETVDSTFGRVRALTSKMRSVRCGGSCALGLCNVAAGRLDAFYEINFG---GCWDSAAGALMVSEAGGTVLDPAGGPWDVMSRRVLAAGTRQLGEAVAAVL 274
BLAST of jgi.p|Trimin1|85562 vs. uniprot
Match: A0A812NZ06_9DINO (Inositol-1-monophosphatase n=1 Tax=Symbiodinium sp. CCMP2456 TaxID=1519616 RepID=A0A812NZ06_9DINO) HSP 1 Score: 218 bits (555), Expect = 2.740e-65 Identity = 125/297 (42.09%), Postives = 185/297 (62.29%), Query Frame = 1
Query: 16 HTAALVLCAAGAAVLMIRGAEAIMADGLSRKRHRKVPEALTQRLGGVEAGLAERMETATELALAAGEAIKLVIDQAKDIENKGANDLVTATDKANEELIFQGLRRAFPGDEFIGEESSAAAGEIAALTAAPTWIVDPVDGTTNFVHGFPMTCVSIGFARGGRVDLGVIYNPCSGEMYQAIRGHGAWLNGKRIRASGSTTLAGSLVITEYGCQREEAAMTRMMDCTRAV-LRKCRNLRQVGSGALDLAFVACGRFDAVYSGVAGEGWKPWDYAAGLVMAEEAGATMLSVEGQPFDLFG 903
A +L +A A +IRG + LS K+ R P + + R A+ + A +LAL G A++ + ++ + D VTATD+ NE+L+ +GL+ AFP + IGEE++AA G LT APTWIVDP+DGTTNFV+G ++CVS+G G R +GV+Y+P + E++ A G GA+LNG+RI+ +T LA ++V+ E G +R E + +M+ R++ L R R +G+ L L +VACGR A Y+G++GEG KPWDYAAG V+A EAGA+ +++G PFD+ G
Sbjct: 9 QVAVSLLASAVAVAAIIRGKQL-----LSEKKRRTSPLSSSSRH-------AKEAKVAVDLALRCGAAMRQCFQKKVLWKDASSIDPVTATDRDNEKLVVEGLKSAFPSHQVIGEEAAAALGSTPKLTDAPTWIVDPIDGTTNFVYGIKLSCVSLGLCIGRRPVVGVVYDPYADELFVAAEGEGAYLNGQRIQVDDATKLAQAMVLFELGYERSEEGVAKMLGGLRSLMLGGVRATRTIGTAVLSLCWVACGRASAYYTGMSGEGGKPWDYAAGTVIALEAGASFCNLQGAPFDVEG 293
BLAST of jgi.p|Trimin1|85562 vs. uniprot
Match: A0A7S3P9K1_9STRA (Inositol-1-monophosphatase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P9K1_9STRA) HSP 1 Score: 214 bits (546), Expect = 1.260e-63 Identity = 107/237 (45.15%), Postives = 152/237 (64.14%), Query Frame = 1
Query: 271 DLVTATDKANEELIFQGLRRAFPGDEFIGEESSAAAGEIAALTAAPTWIVDPVDGTTNFVHGFPMTCVSIGFARGGRVDLGVIYNPCSGEMYQAIRGHGAWLNGKRIRA---SGSTTLAGSLVITEYGCQREEAAMTRMMDCTRAVLRK-CRNLRQVGSGALDLAFVACGRFDAVYSGVAGEGWKPWDYAAGLVMAEEAGATMLSVEGQ---PFDLFGDSVLCCATRELAMEIAEIV 960
D T D NE L+ QG++ AFP D IGEES G PTWI+DP+DGTTNF G P+TCVSIG+ GG +GV+Y P + E++ A++GHG + NG RI+ LA +++ E+G R+ A + RM+ + +L CR R +GSG LDL +VA GR DAVY+GVAGEGWKPWD+ AGLV++EEAG + +++ + PFD++ S +C +++EL E+ ++V
Sbjct: 99 DFFTHIDVENETLVMQGIQAAFPHDAIIGEESVGTGGIPPLKADTPTWIIDPIDGTTNFASGLPLTCVSIGYCVGGVPVMGVVYAPMTDEVFMAVKGHGCFRNGVRIQLLKNKKQKQLAEAMICFEFGYSRQPAQVARMVGAVQRILNHGCRATRHLGSGVLDLCYVATGRLDAVYAGVAGEGWKPWDFCAGLVISEEAGCVIEAIDQKQRGPFDIYSSSHICASSQELLEEVRKLV 335 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|85562 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_2503 ID=mRNA_2503|Name=jgi.p|Trimin1|85562|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1058bp|location=Sequence derived from alignment at Contig_7:219340..230718+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GCGAAGTGCCCTGCGCACACCGCCGCGCTGGTGTTGTGCGCCGCTGGAGCback to top protein sequence of jgi.p|Trimin1|85562 >Trimin1|85562|CE85561_68 ID=Trimin1|85562|CE85561_68|Name=jgi.p|Trimin1|85562|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=306bp MIRGAEAIMADGLSRKRHRKVPEALTQRLGGVEAGLAERMETATELALAAback to top mRNA from alignment at Contig_7:219340..230718+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_2503 ID=mRNA_2503|Name=jgi.p|Trimin1|85562|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=11379bp|location=Sequence derived from alignment at Contig_7:219340..230718+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_7:219340..230718+ >mRNA_2503 ID=mRNA_2503|Name=jgi.p|Trimin1|85562|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=918bp|location=Sequence derived from alignment at Contig_7:219340..230718+ (Tribonema minus UTEX_B_3156 )back to top |