mRNA_2438 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|346820 vs. uniprot
Match: A0A836CBQ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBQ7_9STRA) HSP 1 Score: 1348 bits (3488), Expect = 0.000e+0 Identity = 887/887 (100.00%), Postives = 887/887 (100.00%), Query Frame = 1 Query: 1 MGAAGRRSGEPRPQQMPSELAAQAHELYNSGDYDATLRLLSELAARHEPSDEEEEDLTLTHNTAICEYAKTGFAETQQFGAALRDVRSKLRARASMGSSDGTRATGAGDGGEDASGGAASLSTAYRQGIPFTESAASAAEGLADLDTDASVVLYNMAALHFQQMQYGAARAILEHLFLHIEPVDEPLAIHICFLLLDALCHSARGALHSDAERKRFAQQTSVVLAFLERPHALNASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPDQTEFQFRLHLYKAKVLLLLQDHKPCKKEVKSALEIFQRELRKDGAAAAAPPATSHSPSSGGEAGAQGAFHPVPPPGVQNLTALYLKANLEYLRDNYKKALKLLASCHGFQGSEEYAGPGEPAGPHYHNNMGCLHHKLGKHHAALHYFNKALAAVADGMRAGATGALACGAERDGRVAGGIACEILYNAGLQLLLTAQPAPALRCLERAALLFYNRPRLWLRMAEAALVRASVGAAAHRRLLLPLNHPRKPSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAATLENASRCLKNVLYLGLAAARAERATAEGSAREPGASMLGVSMRITAKNLEAKERGGGAAGADGGXXXXXXXXXXXXXXXXXXXXXXXXASTAAAAWDREPVCQAALLCLAYVHLGLDDPVQALAYAQRLLGGADSGGXXXXXXXXXXLAATHAVLARMYSAEALMLLDRPNAALEQLQPAEEQLSTAAAANAKAPDAXXXXXXXXXDSASDTSPAALRVALHVNLATAHVLRGDGAAAERCLWSALRLAPQAPAALRLLAYVLLRKGLQAEALAVLKEGRLGAGGTAXXXXXXGGAVGR 2661 MGAAGRRSGEPRPQQMPSELAAQAHELYNSGDYDATLRLLSELAARHEPSDEEEEDLTLTHNTAICEYAKTGFAETQQFGAALRDVRSKLRARASMGSSDGTRATGAGDGGEDASGGAASLSTAYRQGIPFTESAASAAEGLADLDTDASVVLYNMAALHFQQMQYGAARAILEHLFLHIEPVDEPLAIHICFLLLDALCHSARGALHSDAERKRFAQQTSVVLAFLERPHALNASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPDQTEFQFRLHLYKAKVLLLLQDHKPCKKEVKSALEIFQRELRKDGAAAAAPPATSHSPSSGGEAGAQGAFHPVPPPGVQNLTALYLKANLEYLRDNYKKALKLLASCHGFQGSEEYAGPGEPAGPHYHNNMGCLHHKLGKHHAALHYFNKALAAVADGMRAGATGALACGAERDGRVAGGIACEILYNAGLQLLLTAQPAPALRCLERAALLFYNRPRLWLRMAEAALVRASVGAAAHRRLLLPLNHPRKPSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAATLENASRCLKNVLYLGLAAARAERATAEGSAREPGASMLGVSMRITAKNLEAKERGGGAAGADGGXXXXXXXXXXXXXXXXXXXXXXXXASTAAAAWDREPVCQAALLCLAYVHLGLDDPVQALAYAQRLLGGADSGGXXXXXXXXXXLAATHAVLARMYSAEALMLLDRPNAALEQLQPAEEQLSTAAAANAKAPDAXXXXXXXXXDSASDTSPAALRVALHVNLATAHVLRGDGAAAERCLWSALRLAPQAPAALRLLAYVLLRKGLQAEALAVLKEGRLGAGGTAXXXXXXGGAVGR Sbjct: 1 MGAAGRRSGEPRPQQMPSELAAQAHELYNSGDYDATLRLLSELAARHEPSDEEEEDLTLTHNTAICEYAKTGFAETQQFGAALRDVRSKLRARASMGSSDGTRATGAGDGGEDASGGAASLSTAYRQGIPFTESAASAAEGLADLDTDASVVLYNMAALHFQQMQYGAARAILEHLFLHIEPVDEPLAIHICFLLLDALCHSARGALHSDAERKRFAQQTSVVLAFLERPHALNASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPDQTEFQFRLHLYKAKVLLLLQDHKPCKKEVKSALEIFQRELRKDGAAAAAPPATSHSPSSGGEAGAQGAFHPVPPPGVQNLTALYLKANLEYLRDNYKKALKLLASCHGFQGSEEYAGPGEPAGPHYHNNMGCLHHKLGKHHAALHYFNKALAAVADGMRAGATGALACGAERDGRVAGGIACEILYNAGLQLLLTAQPAPALRCLERAALLFYNRPRLWLRMAEAALVRASVGAAAHRRLLLPLNHPRKPSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAATLENASRCLKNVLYLGLAAARAERATAEGSAREPGASMLGVSMRITAKNLEAKERGGGAAGADGGXXXXXXXXXXXXXXXXXXXXXXXXASTAAAAWDREPVCQAALLCLAYVHLGLDDPVQALAYAQRLLGGADSGGXXXXXXXXXXLAATHAVLARMYSAEALMLLDRPNAALEQLQPAEEQLSTAAAANAKAPDAXXXXXXXXXDSASDTSPAALRVALHVNLATAHVLRGDGAAAERCLWSALRLAPQAPAALRLLAYVLLRKGLQAEALAVLKEGRLGAGGTAXXXXXXGGAVGR 887
BLAST of jgi.p|Trimin1|346820 vs. uniprot
Match: D7FLM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLM7_ECTSI) HSP 1 Score: 453 bits (1166), Expect = 6.980e-142 Identity = 443/982 (45.11%), Postives = 518/982 (52.75%), Query Frame = 1 Query: 58 LAAQAHELYNSGDYDATLRLLSELAARHEPS-------DEEEEDLTLTHNTAICEYAKTGFAETQQFGAALRDVRSKLRARASMGSSDGTRATGAGDGGEDAS------------------GGAASLSTAYRQGIPFTESAASAAEGLADLDTDASVVLYNMAALHFQQMQYGAARAILEHLFLHIEPVDEPLAIHICFLLLDALCHSARGALHSDAERKRFAQQTSVVLAFLERPHALNASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPDQTEFQFRLHLYKAKVLLLLQDHKPCKKEVKSALEIFQRELRKDGAAAAAPPATSHSPSSGGEAGAQGAFHPVPPPGVQNLTALYLKANLEYLRDNYKKALKLLASCHGFQGSEEYAGPGEPAGPHYHNNMGCLHHKLGKHHAALHYFNKALAAVADGMRAGA-----TGALACGAERDGRVAGGIACEILYNAGLQLLLTAQPAPALRCLERAALLFYNRPRLWLRMAEAALVR--------------------------ASVGAAA---------------------HRRLLLPLNHPRKPSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXT-------------------AATLENASRCLKNVLYLGLAAARA-ERATAEGSAREPGA--SMLGVSMRITAKNLEAKERGGGAAGADGGXXXXXXXXXXXXXXXXXXXXXXXXASTAAAAWDR---EPVCQAALLCLAYVHLGLDDPVQALAYAQRLLGGADSGGXXXXXXXXXXLAATHAVLARMYSAEALMLLDRPNAALEQLQPAEEQLSTAAAANAKAPDAXXXXXXXXXDSASDT---------------------------SPAAL---RVALHVNLATAHVLRGDGAAAERCLWSALRLAPQAPAALRLLAYVLLRKGLQAEALAVLKEGRL 2607 +A QA Y +G Y L LS L+ S + D HN A+ E+ GFA+ + + LR + S+L ARAS G GDG A T +AA+AA GLA+LD DASV+LYN++AL FQQ QYGAA+A+LE LFLH+EP+D+ LAIHIC LLLD LCHSARG LH++ +RF+ QT+ VLAFLERPHALN+S XXXXXXXXXXXXXXXXXXX + +QTEF FRLHLYKAKVLLL + K KKE+KSALEIFQRELR G AA+ G F PVPP GVQN+ ALYLKANLEYLRDN++KALKLLASCHGFQG+EEY+GPGE GP Y NNMGCLHHKL +HH ALHYF KAL A+ G AGA A G +DG V+ CE+LYN GLQLLLT +P ALRC ERAALLF+NRP LWLRMAE ++ R ++ GAAA HRR+LLP N + XXXXXXXXXXXXXXXXXXXXXXXXXXX +L +ASRCL NVLYL A + ++A A G+A G S+LG+S R+ AK L A+GG XXXXXXXXXXX A+T A D E + + AL LAYVHLGLDDPV AL YA RLL S +TH LA +Y+AEAL LL RP ALE L P E +A XXXXXXXXX SP A R +LH NLA H L G AERC +A+ + P + A LR YVL+R+G AEAL VLKEGRL Sbjct: 1 MATQALSSYTAGKYSEALSHLSSLSVAPGSSGDAGGSSSDASNDFRAQHNLALSEHGARGFADPAKLESTLRAIHSRL-ARASAG----------GDGXXXXXXXXXXXXXXXXXXXXXXXSSRALTGTLVVGTSGGARAAATAAAGLAELDVDASVLLYNLSALRFQQKQYGAAQAVLERLFLHMEPLDDSLAIHICLLLLDVLCHSARGNLHTEDNLRRFSAQTAAVLAFLERPHALNSSXXXXXXXXXXXXXXXXXXXXGSGG------------------SAEQTEFAFRLHLYKAKVLLLQEQTKTSKKEIKSALEIFQRELRGSGDAASXXXXXXXXXXXXXXXX-XGTFSPVPPAGVQNMAALYLKANLEYLRDNHRKALKLLASCHGFQGAEEYSGPGEAVGPPYFNNMGCLHHKLKRHHVALHYFQKALEALGKGGEAGADVGGEAAAAGRGGGKDGHVSPAPTCEVLYNTGLQLLLTEKPEEALRCFERAALLFHNRPHLWLRMAECSIARHRLSSNGVGNSGSPFTTTSPVGSKPSSATGAAAGPDAAAGGRGPLPWTPVGKGQHRRVLLPRNSSGGVAAGSGGSGDSARRDRDGAIPALDEDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGCSLAHASRCLHNVLYLCAARKQGVKKAAAAGAAGLLGGQPSVLGMSTRLVAKGLAPSNN------AEGGHXXXXXXXXXXX------------AATPAGDGDSVMAEELYRVALADLAYVHLGLDDPVSALTYAGRLLETNPSA------------VSTH--LAHLYAAEALCLLGRPAEALEHLSPISENACSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVLSPKAAEEARASLHANLAVVHALSGSLGQAERCARTAMGICPGSGAVLRTAVYVLVRQGNIAEALQVLKEGRL 920
BLAST of jgi.p|Trimin1|346820 vs. uniprot
Match: K8YV70_NANGC (CCR4-NOT transcription complex subunit 10 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YV70_NANGC) HSP 1 Score: 329 bits (844), Expect = 5.460e-96 Identity = 304/925 (32.86%), Postives = 400/925 (43.24%), Query Frame = 1 Query: 52 SELAAQAHELYNSGDYDATLRLLSELAARHEPSDEEEEDLTLTHNTAICEYAKTGFAETQQFGAALRDVRSKLRARASMGSSDGTRATGAGDGGEDASGGAASLSTAYR--QGIPFTESAASAAEGLADLDTDASVVLYNMAALHFQQMQYGAARAILEHLFLHIEPVDEPLAIHICFLLLDALCHSARGALHSDAERKRFAQQTSVVLAFLERPHALNASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPDQTEFQFRLHLYKAKVLLLLQDHKPCKKEVKSALEIFQRELRKDGAAAAAPPATSHSPSSGGEAGAQGAFHP-------------------------VPPPGVQNLTALYLKANLEYLRDNYKKALKLLASCHGFQGSEEYAGPGEPAGPHYHNNMGCLHHKLGKHHAALHYFNKALA-------AVADGMRAGATGALAC-----GAERDGRVAGGIACEILYNAGLQLLLTAQPAPALRCLERAALLFYNRPRLWLRMAEAA------------------LVRASVGAAAHRRLLLPLNHPRKPSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAATLENASRCLKNVLYLGLAAARAERATAEGSAREPGASMLGVSMRITAKNLEAKERGGGAAGADGGXXXXXXXXXXXXXXXXXXXXXXXXASTAAAA------WDRE---PVCQAALLCLAYVHLGLDDPVQALAYAQRLL----GGADSGGXXXXXXXXXXLAATHAVLARMYSAEALMLLDRPNAALEQLQPAEEQLSTAAAANAKAPDAXXXXXXXXXDSASDTSP----AALRVALHVNLATAHVLRGDGAAAERCLWSALRLAPQAPAALRLLAYVLLRKGLQAEALAVLKEGR 2604 + +A QA Y G Y+ L L +L+ + D D L N + E+AK GF + +R+ L+ R+ S+ A+R + + E D +TD SV+LYN+AAL+F + QYGA++ IL LF IE ++EPLA+ +CFL LD L HSARG +H+ +R+R + T+ +LA+LERPHA +++A + + EF FRLHLYKAKV LLL+D K KKE+KSALEIFQRELR + A PS+ G+ GA G +PP GV N+ LYLKANLEYLR NY+KALKLLASCH G G Y N+MGCLH K+G H AL YF +A+A A A+G AG T + E DGRV CEI YN GLQLL+ + A RC E A+L+FYNRPR+WLRMAE LVR VG HRRL+L TL A +CL+N L+L A++ G +R P S+LG S K G G G +GG + A+A W + V Q LL L+YV+L L +PV AL YA+ LL G A+ G + V AR Y+AEAL +L RP+ AL+ L P LS A ++ + S P A R ALH+NLA ++L+ + AAAE+C+ L P +P ALR L ++LLR G + AL LK R Sbjct: 7 ASIACQARAFYGVGKYEKALECLQQLSMQPGGGD----DPRLQGNLVLTEHAKGGFKRPLIIKDRITTLRNSLKTRSEK---------------------VGSVQGAFRAKESLRLDAEDEDGDEEADDTETDTSVLLYNLAALNFHEKQYGASQHILHALFARIEVLEEPLAVQVCFLFLDVLLHSARGNIHTVKDRERLSHNTAALLAYLERPHAFSSTALAASEMEDKNGNGSAESLVG------------------SGKGLETAEFTFRLHLYKAKVRLLLRDIKSSKKELKSALEIFQRELRPNPA----------DPSASGKGGALGGGDSDDEVATAASTATTAGNTLMGGYDASLPPAGVANVAGLYLKANLEYLRQNYRKALKLLASCH--------RGEDSAMGAAYLNDMGCLHSKMGLHSVALQYFQRAVASSGQDRPASANGSPAGETPGMPLLPGGRPLETDGRVLPHTFCEIAYNTGLQLLILGRSVQAFRCFENASLVFYNRPRVWLRMAECCVHAYREEEGRREGPVRDRLVRRVVGRGPHRRLVLATRR---------------------------GGDCREFQGGDGAGGARGGGLDGSVGEEARGRCTLIYAVKCLQNALFLLSVASQGG-----GRSRLPMTSLLGGS----------KLAGAGETGGEGGSLDTSNGSVGGGEQHETSALGGSTGAAYASADKKRGSWQEQGDAQVEQVVLLTLSYVYLCLHEPVLALHYAELLLTRGAGWAEDEG--------------NRVAARTYAAEALCVLGRPDEALKHLLPGGTPLSEEAGVSSLQKQCQAESKRVVVTAESFLPPEHFAARARCALHLNLANVYLLQNNLAAAEKCVGLGLAACPTSPDALRCLVFILLRTGNTSAALEALKSRR 814
BLAST of jgi.p|Trimin1|346820 vs. uniprot
Match: A0A8K1CGS1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CGS1_PYTOL) HSP 1 Score: 223 bits (568), Expect = 1.850e-58 Identity = 179/533 (33.58%), Postives = 252/533 (47.28%), Query Frame = 1 Query: 52 SELAAQAHELYNSGDYDATLRLLSELAARHEPSDEEEEDLTLTHNTAICEYAKTGFAETQQFGAALRDVRSKLRARASMGSSDGTRATGAGDGGEDASGGAASLSTAYRQGIPFTESAASAAEGLADLDTDASVVLYNMAALHFQQMQYGAARAILEHLFLHIEPVDEPLAIHICFLLLDALCHSARGALHSDAERKRFAQQTSVVLAFLERPHALNASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPDQTEFQFRLHLYKAKVLLLLQDHKPCKKEVKSALEIFQRELR-KDGAAAAAPPATSHSPSSGGEAGAQGAFHPVPPPG--VQNLTALYLKANLEYLRDNYKKALKLLASCHGFQGSEEYAGPGEPAGPHYHNNMGCLHHKLGKHHAALHYFNKALAAVADGMRAGATGALACGAERDGRVAGGIACEILYNAGLQLLLTAQPAPALRCLERAALLFYNRPRLWLRMAE-------------------AALVRASVGAAAHRRLLLPLNHP 1584 S LA +A + YN+G Y + L +L+ P E D+ + HN + + +A ++F LR++ S L S DG + G ESAA + ++ +AS + YN+AA FQQ QY AA A+LE L +IEP+DE +A+H+CFL LD + HS+RG + +D ER ++ +LA+LE+PH N D EF+FRLHLYKAK++LL + K KKEVKSALEIFQ+E++ +D + PP G GA + P VQ T L+LKANLEYLR N+KK +KLLASC E + NNMGC+H ++G+ AA YF +AL A A +A + + + EI+YN GLQLLL A A RC ++ LF+NRP+LWLRM E + L++ VG+ +HRR++L + P Sbjct: 13 SSLAHRAQQKYNAGKYVEAIDALQKLSEEIAP----ERDVKVQHNLVLAGFVSGKYAP-REFEHNLRNLLSAL-------SEDGDKKKG-------------------------DESAAFS------MEREASFIRYNLAASLFQQKQYAAASAVLEVLLRNIEPIDEKVAMHVCFLYLDIILHSSRGCVVTDRERHTSLKKAQSILAYLEKPHGFNGQLVSHLDGDNSTSETAAGTDAETKQQAKKDNV-------------DVVEFRFRLHLYKAKIMLLQSNLKVAKKEVKSALEIFQKEIKARDRTESELPPVVP-----AGSIGADKTSTVIGHPSLAVQKSTGLFLKANLEYLRSNHKKCIKLLASCVQQAVDESI----------FLNNMGCIHFQMGQRKAAQSYFARALDASAKTRKAPQEAVITSNSAQ---------YEIMYNNGLQLLLQGDYALAFRCFHASSRLFFNRPKLWLRMGECCTAAFAQQARLAATAGHKSGLIQGIVGSGSHRRVVLSASQP 465
BLAST of jgi.p|Trimin1|346820 vs. uniprot
Match: A0A485LG64_9STRA (Aste57867_20881 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LG64_9STRA) HSP 1 Score: 220 bits (561), Expect = 2.430e-57 Identity = 149/403 (36.97%), Postives = 212/403 (52.61%), Query Frame = 1 Query: 433 LDTDASVVLYNMAALHFQQMQYGAARAILEHLFLHIEPVDEPLAIHICFLLLDALCHSARGALHSDAERKRFAQQTSVVLAFLERPHALNASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPDQTEFQFRLHLYKAKVLLLLQDHKPCKKEVKSALEIFQRELRKDGAAAAAPPATSHSPSSGGEA-GAQGAFHPVPPPGVQNLTALYLKANLEYLRDNYKKALKLLASCHGFQGSEEYAGPGEPAGPHYHNNMGCLHHKLGKHHAALHYFNKALAAVADGMRAGATGALACGAERDGRVAGGIACEILYNAGLQLLLTAQPAPALRCLERAALLFYNRPRLWLRMAEA------------------ALVRASVGAAAHRRLLLPLNHP 1584 ++ DAS++ YN+A ++F+Q +Y AA +IL+ L IEP+DE +A+HICFL LD + HS+R + S+A + + ++++LE PH N AS + EF+FRLHLYKAK+ L+ ++ K KKEVK+A+EIFQ+E++ A +SP S G FHP P VQN +AL+LKAN EYLR N+KK +KL+ASC E Y NN+GC+H+++G H AA YF KAL A + + G+ +A + + EILYN GLQLLL + A A RCL ++ LF+NRP+LWLR+ E +LV + VG AHRR++LP+ P Sbjct: 156 MERDASLLRYNLAVVYFRQKKYAAATSILDVLLRAIEPMDETVAMHICFLYLDVILHSSRSSSTSEAAHSQLRHKAQAIVSYLESPHGFNG----------------------------LIAPSTENKKSKASFEANVVEFKFRLHLYKAKLALMHENLKTAKKEVKAAMEIFQKEIK------AKEKPNDNSPLSVQIGIGVGSIFHP--PVAVQNSSALFLKANSEYLRRNFKKCIKLVASCKKQSVDESI----------YLNNLGCIHNQMGHHQAAQSYFAKALEATSQRPKQGSKQEVAS------HLTSSVQAEILYNNGLQLLLLKKYALAFRCLHASSKLFFNRPKLWLRLGECCTASYAAQRESIPTEYKNSLVSSVVGHGAHRRVVLPVRLP 506
BLAST of jgi.p|Trimin1|346820 vs. uniprot
Match: A0A5D6Y176_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y176_9STRA) HSP 1 Score: 219 bits (557), Expect = 1.110e-56 Identity = 191/550 (34.73%), Postives = 259/550 (47.09%), Query Frame = 1 Query: 34 RPQQMPSELAAQAHELYNSGDYDATLRLLSELAARHEPSDEEEEDLTLTHNTAICEYAKTGFAETQQFGAALRDVRSKLRARASMGSSDGTRATGAGDGGEDASGGAASLSTAYRQGIPFTESAASAAEGLADLDTDASVVLYNMAALHFQQMQYGAARAILEHLFLHIEPVDEPLAIHICFLLLDALCHSARGALHSDAERKRFAQQTSVVLAFLERPHALNASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPDQTEFQFRLHLYKAKVLLLLQDHKPCKKEVKSALEIFQRELRKDGAAAAAPPATSHSPSSGGEAGAQGAF---------HPVPPPGVQNLTALYLKANLEYLRDNYKKALKLLASCHGFQGSEEYAGPGEPAGPHYHNNMGCLHHKLGKHHAALHYFNKALAAVADGMRAGATGALACGAERDGRVAGGIACEILYNAGLQLLLTAQPAPALRCLERAALLFYNRPRLWLRMAE-------------------AALVRASVGAAAHRRLLLPLNHPRKPSR 1599 R ++ S LA +A + YN+G Y + L +LA P E D + HN + + G ++ A+LR++ S + A + A GD G D E + +A+ + YN+AA F Q QY AA A+LE + IEPVDE +A+H+CFL LD + HS RG + ++ ER ++ V A+LERPH N XXXXXXXX D TEF+FRLHLYKAK +LL + K KKEVKSALEIFQ+E++ A A S S G GA A HP VQN TAL+LKANLEYLR N KK +KLLASC E + NNMGC+H ++G+ AA YF++AL A +A G + + + EILYN G+ LLL + A RC ++ LF+NRP+LWLRM E + L++ VG+ +HRR++LP + P S+ Sbjct: 42 RGKENKSSLAHRAQQKYNAGKYVEAIDALQKLAEEIAP----ERDSKVQHNLLLAGFV-AGHTAPKELEASLRNLLSAVLDAAEKKKA----AAAVGDAGADC-------------------------EAKFAAEREAAFLRYNLAASLFHQKQYAAAGAMLEGVLRKIEPVDERVAMHVCFLYLDVILHSVRGCVTTERERLATLKKAQAVFAYLERPHRFNGQLFEQPGDAPPXXXXXXXXAGVSAETEPQRKARW-----------DATEFRFRLHLYKAKFVLLEANLKTAKKEVKSALEIFQKEIK------ARDRAVDDSDSGAGVTGATAATWDKTSTAISHPAL--AVQNSTALFLKANLEYLRKNSKKCVKLLASCSQDAVDESI----------FLNNMGCIHFQMGQRKAAQSYFSRALEASGRPKKAQVDGVVVTSSSQ---------FEILYNNGVHLLLQGEFGLAFRCFHASSRLFFNRPKLWLRMGECCTAAFAQQQKLAAVAGNKSGLIQGIVGSGSHRRVVLPTSIPSSASQ 519
BLAST of jgi.p|Trimin1|346820 vs. uniprot
Match: F0W3F1_9STRA (CCR4NOT transcription complex subunit putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W3F1_9STRA) HSP 1 Score: 214 bits (546), Expect = 4.820e-55 Identity = 256/918 (27.89%), Postives = 379/918 (41.29%), Query Frame = 1 Query: 31 PRPQQMPSELAAQAHELYNSGDYDATLRLLSELAARHEPSDEEEEDLTLTHNTAICEYAKTGFAETQQFGAALRDVRSKL--------RARASMGSSDGTRAT--GAGDGGEDASGGAASLSTAYRQGIPFTESAASAAEGLADL--DTDASVVLYNMAALHFQQMQYGAARAILEHLFLHIEPVDEPLAIHICFLLLDALCHSARGALHSDAERKRFAQQTSVVLAFLERPHA---------------------LNASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPDQTEFQFRLHLYKAKVLLLLQDHKPCKKEVKSALEIFQRELRKDGAAAAAPPATSHSPSSGGEAGAQGAFHPVPPPG------VQNLTALYLKANLEYLRDNYKKALKLLASCHGFQGSEEYAGPGEPAGPHYHNNMGCLHHKLGKHHAALHYFNKALAAVADGMRAGATGALACGAERDGRVAGGIACEILYNAGLQLLLTAQPAPALRCLERAALLFYNRPRLWLRMAE-------------------AALVRASVGAAAHRRLLLPLN-HPRKPSRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAATLENASRCLKNVLYLGLAAARAERATAEGSAREPGASMLGVSMRITAKNLEAKERGGGAAGADGGXXXXXXXXXXXXXXXXXXXXXXXXASTAAAAWDREPVCQAALLCLAYVHLGLDDPVQALAYAQRLLGGADSGGXXXXXXXXXXLAATHAVLARMYSAEALMLLDRPNAALEQLQPAEEQLSTAAAANAKAPDAXXXXXXXXXDSASDTSPAALRVALHVNLATAHVLRGDGAAAERCLWSALRLAPQAPAALRLLAYVLLRKGLQAEALAVLKEGRL 2607 PR + S LA +A + +NSG Y + +L +L + P E D + HN A+ + +G + T++F LR + L +A+ +S G+ T GAGD D + L A + + ++ + + DL + +A + YN+AA F Q +Y +AR ILE L I +DE LA+H+CFL LD + H++RG + S+ ER+ + V+A+LER H ++ ++ S + EF+FRLHLY+AK+LLL K KKE+KSALEIFQ+E++ P E+ H + PG ++N TAL+LKANLEYLR NYKK +KLLASC E + NNMGCLH +LG+ HAA +F +AL +A + R + EILYN G+QLLL A RCL ++ LFYNRP+LWLRM E +AL+ VG+ +HRR++LP + H +P + L A++C +NVL L R R GS E ++RI ++ E GA + + Q AL+ L+YV+L L++P AL +A+ +L + + L+ MY+ EAL +L R E L + + ++ A + S A RV +HVN AT +L+G + AE + A+R P +LRLL YVL++KG +AL VLKE ++ Sbjct: 6 PRGKANKSSLAHRAQQKFNSGKYVEAIDVLDKLISEIAP----ERDFKVQHNLAVAHFV-SGRSNTKEFEHELRGLMKALIENVTEDQQAQDGKVNSRGSVGTPIGAGDIFMDQTSNYV-LDNAADTTLKPLMNGNNSVDLMLDLGSEREAYFIRYNLAAALFIQKEYASARNILETLLRFIVMIDEKLAMHVCFLYLDIILHTSRGCVTSELERQECFKSAQTVMAYLERLHTGMITNHGSDEPGIVESNTVSNISQNSALTSPLNYSNAVTGIAAANNAISSGLSSTNFSDPEKRKESNGLNMVEFKFRLHLYRAKLLLLQSKLKLVKKEMKSALEIFQKEMK---------------PFRDSESEDMNDKHNMHVPGNSAVLDIKNATALFLKANLEYLRKNYKKCIKLLASCSRDAVDESI----------FLNNMGCLHFQLGQRHAARSFFARALVNAVRDSKADSP-------IRSMILTNSSQYEILYNNGVQLLLRGDHPSAFRCLYVSSKLFYNRPKLWLRMGECCTRAFAKHQKSLNTADNRSALIEDIVGSGSHRRVILPTHVHCEEPFESKSRSNSIPGSPSAASDSSNSEDTPRM---------------------------NLSFAAKCFRNVLVLYNRLVRTSR---NGSTAES-------AVRIADESTETGTMSQGAL---------------------------------------DLLRQKALVNLSYVYLCLNEPRLALKHAREML-------------LVRTCSKANRYLSMMYATEALCMLSRAAEVTEILHSSTDVMALA--------------DEYAREEGIQASQA--RVGVHVNNATTLILQGKTSEAEDSVTRAVRENPGCRESLRLLVYVLVKKGDTKKALRVLKEAQV 780
BLAST of jgi.p|Trimin1|346820 vs. uniprot
Match: A0A2D4BX71_PYTIN (CCR4-NOT transcription complex subunit, putative (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BX71_PYTIN) HSP 1 Score: 213 bits (542), Expect = 1.000e-54 Identity = 165/407 (40.54%), Postives = 218/407 (53.56%), Query Frame = 1 Query: 433 LDTDASVVLYNMAALHFQQMQYGAARAILEHLFLHIEPVDEPLAIHICFLLLDALCHSARGALHSDAERKRFAQQTSVVLAFLERPHALNASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPDQTEFQFRLHLYKAKVLLLLQDHKPCKKEVKSALEIFQREL--RKDGAAAAAPPATSHSPSSGGEAGAQGAFHPVPPPGVQNLTALYLKANLEYLRDNYKKALKLLASCHGFQGSEEYAGPGEPAGPHYHNNMGCLHHKLGKHHAALHYFNKALAAVADGMRAGATGALACGAER--DGRVAGGIACEILYNAGLQLLLTAQPAPALRCLERAALLFYNRPRLWLRMAE-------------------AALVRASVGAAAHRRLLLPLNHP 1584 L+ +A+ + YN+AA FQQ QY AA A+LE L H+ PVDE +A+H+CFL LD + HS+RG + ++ ER ++ +LA+L++PH+ N A XXXXXXXXXXXX D EF+FRLHLYKAK++LL + K KKEVKSALEIFQ+E+ R G PA + A A PP VQ T L+LKANLEYLR N+KK +KLLASC E + NNMGC+H ++G+ AA YF +AL A A + A + G R + R EI+YN G+QLLL A A RC ++ LF+NRP+LWLRM E + L++ VG +HRR+LL + P Sbjct: 123 LEREAAWLRYNLAASLFQQKQYAAASAVLEALLRHLGPVDEKVAMHVCFLYLDVILHSSRGCVSTERERSAALKKAQSILAYLDKPHSFNGLAASTQASGDDPSGASXXXXXXXXXXXXDATSEPKKDDA------DVVEFRFRLHLYKAKMMLLQSNLKIAKKEVKSALEIFQKEIXARDRGDDGVTGPAGALC------ADRTSATLCHPPLAVQKTTGLFLKANLEYLRANHKKCIKLLASCVQQAVDESL----------FLNNMGCIHFQMGQRKAAQSYFARALDASARSRKTPARLGRSSGESRCAERRNLNSPQLEIMYNNGMQLLLQGDYALAFRCFHASSRLFFNRPKLWLRMGECCTAAFAQQAKLAATAGNKSGLIQGVVGTGSHRRVLLSTSQP 507
BLAST of jgi.p|Trimin1|346820 vs. uniprot
Match: K3WKN5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKN5_GLOUD) HSP 1 Score: 211 bits (538), Expect = 2.460e-54 Identity = 201/548 (36.68%), Postives = 280/548 (51.09%), Query Frame = 1 Query: 25 GEPRPQQMPSELAAQAHELYNSGDYDATLRLLSELAARHEPSDEEEEDLTLTHNTAICEYAKTGFAETQQFGAALRDVRSKLRARASMGSSDGTRATGAGDGGEDASGGAASLSTAYRQGIPFTESAASAAEGLADLDTDASVVLYNMAALHFQQMQYGAARAILEHLFLHIEPVDEPLAIHICFLLLDALCHSARGALHSDAERKRFAQQTSVVLAFLERPHALNASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPDQTEFQFRLHLYKAKVLLLLQDHKPCKKEVKSALEIFQREL----RKDGAAAAAPPATSHSPSSGGEAGAQGAFHPVPPPGVQNLTALYLKANLEYLRDNYKKALKLLASCHGFQGSEEYAGPGEPAGPHYHNNMGCLHHKLGKHHAALHYFNKALAAVADGMRAGATGALACGAERDGRVAGGIACEILYNAGLQLLLTAQPAPALRCLERAALLFYNRPRLWLRMAE-------------------AALVRASVGAAAHRRLLLPLNHPRKPSR 1599 GE R ++ S LA +A + YN+G Y + L +LA P E D + HN + + G ++ +LR++ S + DA+ Y + F + ++S + YN+AA F Q QY AA A+LE + I+P+DE +A+H+CFL LD + HS+RG + ++ ER ++ ++ +LE+PH N XXXXXXXXXXXXXXXXXXXXXXXXXXX D TEF+FRLHLYKAK +LL + K KKEVKSALEIFQ+E+ R D + AA A + S + ++ P VQN TAL+LKANLEYLR NYKK +KLLASC S+E + NNMGC+H ++G+ AA YF++AL A + A + + + EILYN G+ LLL + A RC ++ L +NRP+LWLRM E + L++ VG+ +HRR+LLP + P S+ Sbjct: 3 GESRGKENKSSLAHRAQQKYNAGKYIEAIDALQKLAEEIAP----ERDSKVQHNLLLAGFV-AGNTSAKELELSLRNLLSSIL---------------------DAADKKVDAGADYE--VKFAA------------ERESSFIRYNLAACLFHQKQYAAASAVLEAVMRKIDPIDERVAMHVCFLYLDIILHSSRGCVTTERERFSALKKAQSIMVYLEKPHRFNGQLEHXXXXXXXXXXXXXXXXXXXXXXXXXXXQRKNRW--------DVTEFRFRLHLYKAKFVLLAGNLKTAKKEVKSALEIFQKEIKSRERTDESGAAGNSAALTTAGSWDKTSTSISY---PSLQVQNSTALFLKANLEYLRKNYKKCVKLLASC-----SQEAVDESV-----FLNNMGCIHFQMGQRKAAQSYFSRALEASGKSKKPHADAVVVTSSSQ---------FEILYNNGVHLLLQGDYSLAFRCFHASSRLLFNRPKLWLRMGECCTAAFAQQQKLAAVAGNKSGLIQGIVGSGSHRRVLLPTSIPTSASQ 480
BLAST of jgi.p|Trimin1|346820 vs. uniprot
Match: A0A3M6VD25_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VD25_9STRA) HSP 1 Score: 211 bits (536), Expect = 4.360e-54 Identity = 180/547 (32.91%), Postives = 254/547 (46.44%), Query Frame = 1 Query: 22 SGEPRPQQMPSELAAQAHELYNSGDYDATLRLLSELAARHEPSDEEEEDLTLTHNTAICEYAKTGFAETQQFGAALR-DVRSKLRARASMGSSDGTRATGAGDGGEDASGGAASLSTAYRQGIPFTESAASAAE--GLADLDTDASVVLYNMAALHFQQMQYGAARAILEHLFLHIEPVDEPLAIHICFLLLDALCHSARGALHSDAERKRFAQQTSVVLAFLERPHALNASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASLAPDQTEFQFRLHLYKAKVLLLLQDHKPCKKEVKSALEIFQREL----RKDGAAAAAPPATSHSPSSGGEAGAQGAFHPVPPPGVQNLTALYLKANLEYLRDNYKKALKLLASCHGFQGSEEYAGPGEPAGPHYHNNMGCLHHKLGKHHAALHYFNKALAAVADGMRAGATGALACGAERDGRVAGGIACEILYNAGLQLLLTAQPAPALRCLERAALLFYNRPRLWLRMAE-------------------AALVRASVGAAAHRRLLLPLNHP 1584 SGE R + S L+ +A + YN G Y+ + L +L +P +D + HN A+ +A G Q AL+ ++R++L+ S A G GEDA AAS AE G ++ + + V YN AA F QY A + LE + +++P+DE +A+H FL LD + HS+RG + ++ ER ++ +LAFL++PH N D TEF+FRLHLY+AK +LL + K KKEVKSALEIFQ+E+ R D AA ++ S + G HP VQN TAL+LKANLEYL+ NYKK +KLLASC SE NNMGC+H+++G+ AA YF +AL A + A + EI+YN GL LLL + A A RC ++ L++NRP+LWLR+ E + L++ VG +HRR+LLP + P Sbjct: 2 SGEVRAKDNKSSLSHRAQQKYNGGKYEEAVDALEKLVEEIDPR----QDFKVRHNLALARFA-AGLDTPDQLQLALKQNLRTQLQEHDKKNKSA-PAAAGDSINGEDA--------------------AASVAESSGSFSIEREVAYVRYNYAAALFLSKQYAQASSALEAVMRNVDPIDENVAMHASFLYLDVILHSSRGCVSTERERATAIKKAQSILAFLDKPHRFNTVHEPPDHLVQRDANGNVVETEAQRKSRW-----------------DVTEFRFRLHLYRAKFMLLQCNLKTAKKEVKSALEIFQKEIKTHDRGDVAAISSSTLAMESEKTSAAIG-----HPCLV--VQNSTALFLKANLEYLKKNYKKCIKLLASCTQKAVSESVVL----------NNMGCIHYQMGQRKAAQSYFARALQATTRATKMDAV-----------VIVSSCHHEIMYNNGLHLLLQGEYALAFRCFHESSRLYFNRPKLWLRLGECCTAAFAKEQKLAVVAGNKSGLIQGIVGTGSHRRVLLPTSLP 477 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346820 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_2438 ID=mRNA_2438|Name=jgi.p|Trimin1|346820|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2664bp|location=Sequence derived from alignment at Contig_5:1519105..1523859- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGGAGCTGCGGGACGGCGAAGCGGGGAGCCTCGGCCTCAGCAGATGCCback to top protein sequence of jgi.p|Trimin1|346820 >Trimin1|346820|estExt_Genemark1.C_Ctg_50185 ID=Trimin1|346820|estExt_Genemark1.C_Ctg_50185|Name=jgi.p|Trimin1|346820|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=888bp MGAAGRRSGEPRPQQMPSELAAQAHELYNSGDYDATLRLLSELAARHEPSback to top mRNA from alignment at Contig_5:1519105..1523859- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_2438 ID=mRNA_2438|Name=jgi.p|Trimin1|346820|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4755bp|location=Sequence derived from alignment at Contig_5:1519105..1523859- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_5:1519105..1523859- >mRNA_2438 ID=mRNA_2438|Name=jgi.p|Trimin1|346820|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2664bp|location=Sequence derived from alignment at Contig_5:1519105..1523859- (Tribonema minus UTEX_B_3156 )back to top |