mRNA_2400 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|158262 vs. uniprot
Match: A0A835Z082_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z082_9STRA) HSP 1 Score: 501 bits (1290), Expect = 1.860e-179 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 1 Query: 1 YAVKMLTKAKMEPEDEANLLEEVNILRELKHPNIISIYQFYCQEPDNYYVIIEYMQGGELFDRIVKKQFYMEKEARDLCKALLGAIKCCHDRDIVHRDLKPENLLLTSDVDDANIKLADFGFATHLVSARSVLAILECCTPAYAAPEILRHKPYGTSVDMWSIGVIMYILLGGYPPFKGESRTRLSRKIRTGRFEVHNEYWGSISSDAKDLISELLTVSVTKVRWSRMLEFKVIRATWVKVSQTPAR 741 YAVKMLTKAKMEPEDEANLLEEVNILRELKHPNIISIYQFYCQEPDNYYVIIEYMQGGELFDRIVKKQFYMEKEARDLCKALLGAIKCCHDRDIVHRDLKPENLLLTSDVDDANIKLADFGFATHLVSARSVLAILECCTPAYAAPEILRHKPYGTSVDMWSIGVIMYILLGGYPPFKGESRTRLSRKIRTGRFEVHNEYWGSISSDAKDLISELLTVSVTKVRWSRMLEFKVIRATWVKVSQTPAR Sbjct: 1 YAVKMLTKAKMEPEDEANLLEEVNILRELKHPNIISIYQFYCQEPDNYYVIIEYMQGGELFDRIVKKQFYMEKEARDLCKALLGAIKCCHDRDIVHRDLKPENLLLTSDVDDANIKLADFGFATHLVSARSVLAILECCTPAYAAPEILRHKPYGTSVDMWSIGVIMYILLGGYPPFKGESRTRLSRKIRTGRFEVHNEYWGSISSDAKDLISELLTVSVTKVRWSRMLEFKVIRATWVKVSQTPAR 247
BLAST of jgi.p|Trimin1|158262 vs. uniprot
Match: A0A835YZ60_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ60_9STRA) HSP 1 Score: 347 bits (891), Expect = 3.520e-117 Identity = 177/244 (72.54%), Postives = 197/244 (80.74%), Query Frame = 1 Query: 1 YAVKMLTKAKMEPEDEANLLEEVNILRELKHPNIISIYQFYCQEPDNYYVIIEYMQGGELFDRIVKKQFYMEKEARDLCKALLGAIKCCHDRDIVHRDLKPENLLLTSDVDDANIKLADFGFATHLVSARSVLAILECCTPAYAAPEILRHKPYGTSVDMWSIGVIMYILLGGYPPFKGESRTRLSRKIRTGRFEVHNEYWGSISSDAKDLISELLTVSVTKVRWSRMLEFKVIRATWVKVSQT 732 YAVKM+ KA + PEDEA+LLEEV ILR+L HPNII IYQFY QE DNYYVIIEYM+GGELFDRIVKKQFY EKEARDLCK LL AIK CHDRDIVHRDLKPENLLLTS+ DDA+IKLADFGFA L + + +C TPAY APEILRH+PYGTSVDMWSIGVI+YILLGGYPPF E++TRL RKIR G+FE HNEYWGSISSDAKDLIS LLTV + SR+ + + W+ S T Sbjct: 67 YAVKMVRKANLAPEDEADLLEEVKILRQLNHPNIIDIYQFYRQERDNYYVIIEYMRGGELFDRIVKKQFYTEKEARDLCKILLDAIKYCHDRDIVHRDLKPENLLLTSNDDDASIKLADFGFAKALNGS---MVTTQCGTPAYVAPEILRHRPYGTSVDMWSIGVIIYILLGGYPPFHDENQTRLFRKIRAGKFEFHNEYWGSISSDAKDLISRLLTVD----QHSRLTAREAVSHPWLLTSDT 303
BLAST of jgi.p|Trimin1|158262 vs. uniprot
Match: A0A6H5K8A8_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8A8_9PHAE) HSP 1 Score: 295 bits (754), Expect = 3.860e-96 Identity = 147/221 (66.52%), Postives = 169/221 (76.47%), Query Frame = 1 Query: 4 AVKMLTKAKMEPEDEANLLEEVNILRELKHPNIISIYQFYCQEPDNYYVIIEYMQGGELFDRIVKKQFYMEKEARDLCKALLGAIKCCHDRDIVHRDLKPENLLLTSDVDDANIKLADFGFATHLVSARSVLAILECCTPAYAAPEILRHKPYGTSVDMWSIGVIMYILLGGYPPFKGESRTRLSRKIRTGRFEVHNEYWGSISSDAKDLISELLTVSVTK 666 AVK + + + EDE +LLEEV ILR LKHPN+I IYQF+ +PDNYYV IEYM+GGELFDRIVKK FY EKEARDLC+ LL A++ CHD IVHRDLKPENLLLTS DDAN+KLADFGFA ++ +C TP Y APEILR + YGTSVDMWSIGVI+YILLGGYPPF E++TRL RKI+ G F+ H EYW S SS+AKDLI LLTV K Sbjct: 86 AVKCIERNNLPKEDEEDLLEEVRILRSLKHPNVIDIYQFFKDDPDNYYVSIEYMRGGELFDRIVKKAFYNEKEARDLCRILLDAVRYCHDLGIVHRDLKPENLLLTSQHDDANVKLADFGFARSIMGG---FVSTQCGTPGYVAPEILRAESYGTSVDMWSIGVIVYILLGGYPPFHDENQTRLFRKIKAGNFKFHPEYWQSTSSEAKDLIRRLLTVDPKK 303
BLAST of jgi.p|Trimin1|158262 vs. uniprot
Match: A0A836CHL2_9STRA (Putative calcium/calmodulin-dependent protein kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHL2_9STRA) HSP 1 Score: 268 bits (684), Expect = 1.200e-85 Identity = 132/242 (54.55%), Postives = 171/242 (70.66%), Query Frame = 1 Query: 1 YAVKMLTKAKMEPEDEANLLEEVNILRELKHPNIISIYQFYCQEPDNYYVIIEYMQGGELFDRIVKKQFYMEKEARDLCKALLGAIKCCHDRDIVHRDLKPENLLLTSDVDDANIKLADFGFATHLVSARSVLAILECCTPAYAAPEILRHKPYGTSVDMWSIGVIMYILLGGYPPFKGESRTRLSRKIRTGRFEVHNEYWGSISSDAKDLISELLTVSVTKVRWSRMLEFKVIRATWVKVS 726 YAVK + K ++ +A+L++EV +LRE+ HPN++++YQFY +E D++YVI+EYM+GGELF+RIV KQ Y EKEAR +C+ LL ++ HD D+VHRDLKP+NLLLTSD DDANIKLADFGFA L + C TP Y APEIL H+PYG +VDMWS+G I+YILLGGY PF +++TRL RKIR G + H EYW IS +AKDLI L V K R+ + + W+ VS Sbjct: 70 YAVKCIKKQGLDELTKADLMDEVAVLREMAHPNVVNVYQFYPREKDHFYVIMEYMKGGELFERIVAKQVYTEKEARAVCRVLLATVRYLHDHDVVHRDLKPDNLLLTSDADDANIKLADFGFAKKLDGQKLTQL---CGTPNYIAPEILLHEPYGVTVDMWSLGCIIYILLGGYLPFVDDNQTRLFRKIRNGAYSFHPEYWSDISDEAKDLIRGCLNVDAEK----RLTAAQAMEHPWLAVS 304
BLAST of jgi.p|Trimin1|158262 vs. uniprot
Match: D8LK21_ECTSI (Possible Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK21_ECTSI) HSP 1 Score: 266 bits (681), Expect = 8.930e-85 Identity = 130/222 (58.56%), Postives = 165/222 (74.32%), Query Frame = 1 Query: 1 YAVKMLTKAKMEPEDEANLLEEVNILRELKHPNIISIYQFYCQEPDNYYVIIEYMQGGELFDRIVKKQFYMEKEARDLCKALLGAIKCCHDRDIVHRDLKPENLLLTSDVDDANIKLADFGFATHLVSARSVLAILECCTPAYAAPEILRHKPYGTSVDMWSIGVIMYILLGGYPPFKGESRTRLSRKIRTGRFEVHNEYWGSISSDAKDLISELLTVSVTK 666 YAVK + + EDE LLEEV ILR L+H N+++IYQF+ +PD YY+++E M GGELFDRIV+K +Y E+EARDLC+ LL +++ CH+ IVHRDLKPENLLLTS DDA IKLADFGFA +++ +C +P Y APEILR PYGTSVDMWS+GVI+Y LLGGYPPF E++TRL R+I+ G F+ H+EYW + S +AKDLI +LL V K Sbjct: 109 YAVKRTVRRGLAKEDEKGLLEEVRILRLLQHSNVVAIYQFFQDDPDYYYMVLENMAGGELFDRIVQKSYYNEEEARDLCRVLLDSVRYCHELGIVHRDLKPENLLLTSKHDDAGIKLADFGFACSVLNGP---VSEQCGSPGYVAPEILRALPYGTSVDMWSVGVIIYTLLGGYPPFHDENQTRLFRRIKAGSFKFHDEYWSNTSLEAKDLIRKLLLVDPAK 327
BLAST of jgi.p|Trimin1|158262 vs. uniprot
Match: A0A6V1U2B4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U2B4_HETAK) HSP 1 Score: 261 bits (666), Expect = 3.010e-83 Identity = 132/222 (59.46%), Postives = 161/222 (72.52%), Query Frame = 1 Query: 1 YAVKMLTKAKMEPEDEANLLEEVNILRELKHPNIISIYQFYCQEPDNYYVIIEYMQGGELFDRIVKKQFYMEKEARDLCKALLGAIKCCHDRDIVHRDLKPENLLLTSDVDDANIKLADFGFATHLVSARSVLAILECCTPAYAAPEILRHKPYGTSVDMWSIGVIMYILLGGYPPFKGESRTRLSRKIRTGRFEVHNEYWGSISSDAKDLISELLTVSVTK 666 +AVK++ + + EDE L+EEV ILR + HPNII ++ F+ +E YY++ E MQGGELFDRIVKK FY EKEARDL K LL A+K CHD DIVHRDLKPENLLL+S DDA+IK+ADFGFA L R +C TP Y APEIL PYG SVDMWS GVI YILLGGYPPF E ++ L KIR+G +E H EYW ++S DA+DLI ++LTV + + Sbjct: 56 FAVKIVKRMDLPLEDEEALIEEVTILRGISHPNIIKLFDFF-EEKHFYYLVTELMQGGELFDRIVKKTFYNEKEARDLVKILLSAVKYCHDNDIVHRDLKPENLLLSSAEDDASIKIADFGFARLL---RGNTLTTQCGTPGYVAPEILNGVPYGKSVDMWSCGVITYILLGGYPPFHDEKQSNLFAKIRSGSYEFHPEYWQNVSKDAQDLIKKMLTVDIAQ 273
BLAST of jgi.p|Trimin1|158262 vs. uniprot
Match: A0A7S2XV40_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV40_9STRA) HSP 1 Score: 260 bits (665), Expect = 1.000e-82 Identity = 133/239 (55.65%), Postives = 168/239 (70.29%), Query Frame = 1 Query: 1 YAVKMLTKAKMEPEDEANLLEEVNILRELKHPNIISIYQFYCQEPDNYYVIIEYMQGGELFDRIVKKQFYMEKEARDLCKALLGAIKCCHDRDIVHRDLKPENLLLTSDVDDANIKLADFGFATHLVSARSVLAILECCTPAYAAPEILRHKPYGTSVDMWSIGVIMYILLGGYPPFKGESRTRLSRKIRTGRFEVHNEYWGSISSDAKDLISELLTVSVTKVRWSRMLEFKVIRATWV 717 +AVK++ + + P+DE L+EEV IL+ + HPNII +Y+F+ +E YY++IE M+GGELFDRIV+K +Y EKEARDL LL AIK CHD IVHRDLKPENLLLTS DDA+IK+ADFGFA + + ++ +C TP Y APEIL PYG +VDMWSIGVI YILLGGYPPF E ++ L KIR G F H EYW +S +AKDLI +LLTV K R+ + ++ WV Sbjct: 54 FAVKIVKRMDLPPDDEEALIEEVTILKHVDHPNIIKLYEFF-EEKHFYYLVIELMEGGELFDRIVQKTYYNEKEARDLVHILLSAIKFCHDNGIVHRDLKPENLLLTSSKDDASIKIADFGFARQVKESNNLTT--QCGTPGYVAPEILNGVPYGLAVDMWSIGVITYILLGGYPPFHDEKQSNLFAKIRAGDFVFHPEYWDPVSEEAKDLIRKLLTVDPNK----RITAAEAMQHPWV 285
BLAST of jgi.p|Trimin1|158262 vs. uniprot
Match: A0A448Z7J1_9STRA (Protein kinase domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z7J1_9STRA) HSP 1 Score: 259 bits (663), Expect = 3.770e-82 Identity = 127/239 (53.14%), Postives = 171/239 (71.55%), Query Frame = 1 Query: 1 YAVKMLTKAKMEPEDEANLLEEVNILRELKHPNIISIYQFYCQEPDNYYVIIEYMQGGELFDRIVKKQFYMEKEARDLCKALLGAIKCCHDRDIVHRDLKPENLLLTSDVDDANIKLADFGFATHLVSARSVLAILECCTPAYAAPEILRHKPYGTSVDMWSIGVIMYILLGGYPPFKGESRTRLSRKIRTGRFEVHNEYWGSISSDAKDLISELLTVSVTKVRWSRMLEFKVIRATWV 717 +A+K++TKAK+ EDE L +E+++L++++H +II +Y + +EP +YY++ E M GGELFDRIV+K +Y EKEARD C LL AI CHD+ + HRDLKPENLLLTS+ DD++IK+ADFGFA + + +S+ +C TP Y A EIL +PY T DMWSIGVI+YILLGGYPPF ++ L RKIR G++E H EYWG +S DAKDLI LLTV+ K R+ K + W+ Sbjct: 100 FAIKIVTKAKLSKEDEVALKDEIDVLKDMEHKHIIRLYDVF-EEPHHYYLVTEKMGGGELFDRIVQKSYYNEKEARDTCLILLSAIHYCHDQKVAHRDLKPENLLLTSEKDDSSIKIADFGFAKRVKTPKSLTT--QCGTPGYVAAEILEGQPYDTQADMWSIGVIVYILLGGYPPFIESNQRTLFRKIRKGQYEFHEEYWGQVSEDAKDLIRSLLTVNPDK----RLSATKALSNKWI 331
BLAST of jgi.p|Trimin1|158262 vs. uniprot
Match: A0A7S2VC44_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VC44_9STRA) HSP 1 Score: 258 bits (660), Expect = 4.480e-82 Identity = 129/239 (53.97%), Postives = 169/239 (70.71%), Query Frame = 1 Query: 1 YAVKMLTKAKMEPEDEANLLEEVNILRELKHPNIISIYQFYCQEPDNYYVIIEYMQGGELFDRIVKKQFYMEKEARDLCKALLGAIKCCHDRDIVHRDLKPENLLLTSDVDDANIKLADFGFATHLVSARSVLAILECCTPAYAAPEILRHKPYGTSVDMWSIGVIMYILLGGYPPFKGESRTRLSRKIRTGRFEVHNEYWGSISSDAKDLISELLTVSVTKVRWSRMLEFKVIRATWV 717 YA+K++TKAK+ EDEA L +E+ +L+EL+HP+II +Y + +E D YY++ E M GGELFDRIV+K +Y EKEARD C L AI+ CH + + HRDLKPENLLL S +D+NIK+ADFGFA + S+ +C TP Y APEIL PY T DMWS+GVI+YILLGGYPPF +++ L RKIR G++E H EYWG ++++AK LIS LLTVS TK R+ K + W+ Sbjct: 66 YAIKIVTKAKLSDEDEAALKDEITVLKELQHPSIIRLYDVF-EEKDYYYLVTEKMTGGELFDRIVQKSYYNEKEARDTCVILFKAIQYCHSKQVAHRDLKPENLLLQSADNDSNIKIADFGFAKKCLRPNSLTT--QCGTPGYVAPEILEGTPYDTKADMWSLGVIVYILLGGYPPFIEQNQRDLFRKIRKGQYEFHEEYWGQVTNEAKALISALLTVSSTK----RIAADKALAHEWI 297
BLAST of jgi.p|Trimin1|158262 vs. uniprot
Match: A0A7S0SZL7_9STRA (Hypothetical protein n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SZL7_9STRA) HSP 1 Score: 255 bits (651), Expect = 6.920e-82 Identity = 128/212 (60.38%), Postives = 157/212 (74.06%), Query Frame = 1 Query: 82 ELKHPNIISIYQFYCQEPDNYYVIIEYMQGGELFDRIVKKQFYMEKEARDLCKALLGAIKCCHDRDIVHRDLKPENLLLTSDVDDANIKLADFGFATHLVSARSVLAILECCTPAYAAPEILRHKPYGTSVDMWSIGVIMYILLGGYPPFKGESRTRLSRKIRTGRFEVHNEYWGSISSDAKDLISELLTVSVTKVRWSRMLEFKVIRATWV 717 +L HPNII+ Y F+ +E NYYV++EYM GGELFDRIVKK Y EKEARD+ K L+ AIK CHDRD+VHRDLKPENLLLTS DDA++K+ADFGFA V S L +C TP Y APEIL +KPYG +VDMWSIGVI YI+LGGYPPF ++ L RKIR G FE H EYW ++SSDAK+LI LLTV+ + +R+ +V++ W+ Sbjct: 1 QLNHPNIINCYDFF-EEEKNYYVVLEYMDGGELFDRIVKKTVYNEKEARDVVKILVSAIKYCHDRDVVHRDLKPENLLLTSREDDASLKIADFGFA---VRVNSNLLSTQCGTPGYIAPEILENKPYGKAVDMWSIGVITYIILGGYPPFHDDNMRNLFRKIRKGDFEFHPEYWNNVSSDAKNLIKGLLTVNAS----ARLTADQVLQHPWL 204 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|158262 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_2400 ID=mRNA_2400|Name=jgi.p|Trimin1|158262|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=744bp|location=Sequence derived from alignment at Contig_5:1226081..1230497+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TACGCAGTCAAGATGTTGACGAAGGCGAAAATGGAACCAGAGGACGAGGCback to top protein sequence of jgi.p|Trimin1|158262 >Trimin1|158262|e_gw1.5.192.1 ID=Trimin1|158262|e_gw1.5.192.1|Name=jgi.p|Trimin1|158262|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=248bp YAVKMLTKAKMEPEDEANLLEEVNILRELKHPNIISIYQFYCQEPDNYYVback to top mRNA from alignment at Contig_5:1226081..1230497+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_2400 ID=mRNA_2400|Name=jgi.p|Trimin1|158262|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4417bp|location=Sequence derived from alignment at Contig_5:1226081..1230497+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_5:1226081..1230497+ >mRNA_2400 ID=mRNA_2400|Name=jgi.p|Trimin1|158262|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=744bp|location=Sequence derived from alignment at Contig_5:1226081..1230497+ (Tribonema minus UTEX_B_3156 )back to top |