mRNA_2376 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|158100
Unique NamemRNA_2376
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|158100 vs. uniprot
Match: A0A836CD99_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD99_9STRA)

HSP 1 Score: 763 bits (1971), Expect = 1.570e-279
Identity = 358/358 (100.00%), Postives = 358/358 (100.00%), Query Frame = 1 
Query:    1 MLSAKPQHSHHRWLRLRTFGDVPTLRSGQGAAVVAGSVYIFGGCDAVMQNDIYRFDVDTHEWCAVTCDDGPSPRAAFGMCSGPGQYDFTVACGCGLGERSAQSDIWSFDVRRRRWRKLFESPRAAYGVSICWHGSTLLLWGGTSGVEYYASLYAFTLHTGSIVRVNTSGCGPSKRYKHVSFVYGNDMYVCGGGTFSPTERSMGMHKLNLTTLVWQRLGDDREGVSIGRTACTCCFDVESSKAWVFGGFDSDAKRLQAFQTFDVVSNAWAEVGGVKAETSPAPRAFHSMVLCRGALFMFLGADGNVCYDDVWRYSIRSTPPPLQHLATRAFLTLPGGECPHGVPGEMRTLIDAVKQSRS 1074
            MLSAKPQHSHHRWLRLRTFGDVPTLRSGQGAAVVAGSVYIFGGCDAVMQNDIYRFDVDTHEWCAVTCDDGPSPRAAFGMCSGPGQYDFTVACGCGLGERSAQSDIWSFDVRRRRWRKLFESPRAAYGVSICWHGSTLLLWGGTSGVEYYASLYAFTLHTGSIVRVNTSGCGPSKRYKHVSFVYGNDMYVCGGGTFSPTERSMGMHKLNLTTLVWQRLGDDREGVSIGRTACTCCFDVESSKAWVFGGFDSDAKRLQAFQTFDVVSNAWAEVGGVKAETSPAPRAFHSMVLCRGALFMFLGADGNVCYDDVWRYSIRSTPPPLQHLATRAFLTLPGGECPHGVPGEMRTLIDAVKQSRS
Sbjct:    1 MLSAKPQHSHHRWLRLRTFGDVPTLRSGQGAAVVAGSVYIFGGCDAVMQNDIYRFDVDTHEWCAVTCDDGPSPRAAFGMCSGPGQYDFTVACGCGLGERSAQSDIWSFDVRRRRWRKLFESPRAAYGVSICWHGSTLLLWGGTSGVEYYASLYAFTLHTGSIVRVNTSGCGPSKRYKHVSFVYGNDMYVCGGGTFSPTERSMGMHKLNLTTLVWQRLGDDREGVSIGRTACTCCFDVESSKAWVFGGFDSDAKRLQAFQTFDVVSNAWAEVGGVKAETSPAPRAFHSMVLCRGALFMFLGADGNVCYDDVWRYSIRSTPPPLQHLATRAFLTLPGGECPHGVPGEMRTLIDAVKQSRS 358
[Close]
BLAST of jgi.p|Trimin1|158100 vs. uniprot
Match: A0A835ZA21_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA21_9STRA)

HSP 1 Score: 394 bits (1011), Expect = 2.520e-133
Identity = 191/358 (53.35%), Postives = 246/358 (68.72%), Query Frame = 1 
Query:    1 MLSAKPQHSHHRWLRLRTFGDVPTLRSGQGAAVVAGSVYIFGGCDAVM-QNDIYRFDVDTHEWCAVTCDDGPSPRAAFGMCSGPGQYDFTVACGCGLGERSAQSDIWSFDVRRRRWRKLFESPRAAYGVSICWHGSTLLLWGGTSGVEYYASLYAFTLHTGSIVRVNTSGCGPSKRYKHVSFVYGNDMYVCGGGTFSPTERSMGMHKLNLTTLVWQRLGDDREGVSIGRTACTCCFDVESSKAWVFGGFDSDAKRLQAFQTFDVVSNAWAEVGGVKAETSPAPRAFHSMVLCRGALFMFLGADGNVCYDDVWRYSIRSTPPPLQHLATRAFLTLPGGECPHGVPGEMRTLIDAVKQSR 1071
            M S    + H  W+ L TFGD P  RSG  A VV G +Y+FGGCD V+  ND++ FD  THEW A+  + GP+PRAAFGMC+GPG+ DFT+ACG      SA SDIWSF+ RRR W KLFESP+A YGVSICW+G  LL++ GT+G+EY   LYAF   T S+V+V+T+G  PS+RYKH SF+  +DMYV GGG F+PTE  M + +LNL +L W+++    +  SI RTA +CC D E+ K WVFGGFD+D  RLQAFQ +D+    W  V  V    SP  RAFHSM+  +G+LF+ LGA+G   ++DVW+Y IRSTPP LQ LA  AFL LP   C   +P EM++LI++V+ +R
Sbjct:    1 MYSKSLLNRHREWVLLNTFGDPPCARSGHAAVVVRGKIYVFGGCDGVVVYNDLHWFDTATHEWSAIHSEGGPTPRAAFGMCAGPGEDDFTIACGSDTQYMSAFSDIWSFNTRRRTWTKLFESPKALYGVSICWYGRMLLMYAGTTGLEYCNHLYAFDSLTSSVVKVSTTGVCPSRRYKHESFILDDDMYVFGGGCFAPTEGCMFISRLNLRSLEWKQVQVQND-TSIPRTAFSCCMDPETLKVWVFGGFDADNTRLQAFQCYDMQLRKWENVASV---CSPPSRAFHSMIYSQGSLFLMLGANGKRKFNDVWQYRIRSTPPSLQMLAAHAFLRLPHSACRPAIPDEMQSLIESVRLTR 354
[Close]
BLAST of jgi.p|Trimin1|158100 vs. uniprot
Match: A0A835Z6H5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6H5_9STRA)

HSP 1 Score: 389 bits (998), Expect = 1.990e-131
Identity = 187/353 (52.97%), Postives = 242/353 (68.56%), Query Frame = 1 
Query:   22 HSHHRWLRLRTFGDVPTLRSGQGAAVVAGSVYIFGGCDAV-MQNDIYRFDVDTHEWCAVTCDDGPSPRAAFGMCSGPGQYDFTVACGCGLGERSAQSDIWSFDVRRRRWRKLFESPRAAYGVSICWHGSTLLLWGGTSGVEYYASLYAFTLHTGSIVRVNTSGCGPSKRYKHVSFVYGNDMYVCGGGTFSPTERSMGMHKLNLTTLVWQRLGDDREG-VSIGRTACTCCFDVESSKAWVFGGFDSDAKRLQAFQTFDVVSNAWAEVGGVKAETSPAPRAFHSMVLCRGALFMFLGADGNVCYDDVWRYSIRSTPPPLQHLATRAFLTLPGGECPHGVPGEMRTLIDAVKQSRS 1074
            + H  WL L TFGD P  RSG  A VV G +Y+FGGCD V + ND++RFD  THEW  +  + GP+PRAAFGMC+GPG+ DFT+ACG      SA +DIW F+ RRR W K+FESP+A YGVSICW+G  LL++ GT+G +Y   LYAF   T  + +V+T+G  PS+RYKH SFV  +DMYV GGG F+PTE  M + +L+L +L W+++  D EG  S+ RTA +CC D E+ K WVFGGFD+D  RLQAFQ +D+ SN W  V  V    SP  RAFHSM+  +G+L++ LGA+G   ++D+W+Y IRSTPP LQ LA  A L LP   C   +P E+ +LI+AVK  RS
Sbjct:    8 NQHQEWLHLNTFGDRPCARSGHSAVVVGGKIYVFGGCDGVAVYNDLHRFDTVTHEWSVIHAEGGPTPRAAFGMCAGPGEEDFTIACGSNTQHMSAFADIWRFNTRRRAWTKMFESPKALYGVSICWYGRMLLMYAGTTGSKYSNHLYAFDARTSGVAKVSTTGVCPSRRYKHESFVVNDDMYVFGGGCFAPTEGCMFISRLDLRSLEWKQV--DVEGDTSVARTAVSCCVDPETLKVWVFGGFDADNTRLQAFQNYDLTSNEWNVVQTV---CSPDARAFHSMIYTQGSLYLMLGANGKRKFNDIWQYRIRSTPPTLQMLAAHALLRLPRLACQPSLPDEIHSLIEAVKVVRS 355
[Close]
BLAST of jgi.p|Trimin1|158100 vs. uniprot
Match: A0A835YN69_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN69_9STRA)

HSP 1 Score: 379 bits (972), Expect = 3.310e-127
Identity = 186/350 (53.14%), Postives = 238/350 (68.00%), Query Frame = 1 
Query:   25 SHHRWLRLRTFGDVPTLRSGQGAAVVAGSVYIFGGCDA-VMQNDIYRFDVDTHEWCAVTCDDGPSPRAAFGMCSGPGQYDFTVACGCGLGERSAQSDIWSFDVRRRRWRKLFESPRAAYGVSICWHGSTLLLWGGTSGVEYYASLYAFTLHTGSIVRVNTSGCGPSKRYKHVSFVYGNDMYVCGGGTFSPTERSMGMHKLNLTTLVWQRLGDDREGVSIGRTACTCCFDVESSKAWVFGGFDSDAKRLQAFQTFDVVSNAWAEVGGVKAETSPAPRAFHSMVLCRGALFMFLGADGNVCYDDVWRYSIRSTPPPLQHLATRAFLTL-PGGECPHGVPGEMRTLIDAVKQS 1068
            SH+ W +L T GD P  RSGQGA VV   VYIFGGCD   + NDI  F + T EW  +T   GPS R +FG+C GPG  D TVACGC L    A +DIWSF+VR R W K F+SPRA YGVS+CW+   LL++GG++GV Y  +LYAF+L TG++ ++ TSG GPS+RYK   FV   ++Y+CGGG F+P    M M KLNLT+L W  L  + + +S  R A +CC D E+SKAW+FGGF     RLQAFQTFD+  N W +V   +   SP PRAFHSMVLC+G+L + LG+DG+  +DDVW++ IRSTPP LQ LA +AF+ L P  E P  VP E+R LI+ V+++
Sbjct:   12 SHNEWRQLNTVGDAPCARSGQGAVVVDDVVYIFGGCDGEAVSNDIRAFYIHTSEWQKITHQLGPSARTSFGICLGPGVEDVTVACGCNLDTPGALADIWSFNVRHRTWTKRFDSPRALYGVSVCWNDDNLLMYGGSTGVAYSDTLYAFSLKTGNVAKIKTSGEGPSERYKQEMFVVDENLYMCGGGAFAPAAGRMQMFKLNLTSLSWHVLEAEND-ISTPRAAFSCCVDSETSKAWIFGGFSVHNNRLQAFQTFDIQRNVWNDV---QTLCSPPPRAFHSMVLCKGSLLLLLGSDGDKIFDDVWKFCIRSTPPSLQMLAAKAFIKLFPTAESP-AVPHELRVLIETVRRT 356
[Close]
BLAST of jgi.p|Trimin1|158100 vs. uniprot
Match: A0A835Z2J9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2J9_9STRA)

HSP 1 Score: 373 bits (957), Expect = 3.250e-124
Identity = 180/338 (53.25%), Postives = 234/338 (69.23%), Query Frame = 1 
Query:   61 DVPTLRSGQGAAVVAGSVYIFGGCDAVM-QNDIYRFDVDTHEWCAVTCDDGPSPRAAFGMCSGPGQYDFTVACGCGLGERSAQSDIWSFDVRRRRWRKLFESPRAAYGVSICWHGSTLLLWGGTSGVEYYASLYAFTLHTGSIVRVNTSGCGPSKRYKHVSFVYGNDMYVCGGGTFSPTERSMGMHKLNLTTLVWQRLGDDREGVSIGRTACTCCFDVESSKAWVFGGFDSDAKRLQAFQTFDVVSNAWAEVGGVKAETSPAPRAFHSMVLCRGALFMFLGADGNVCYDDVWRYSIRSTPPPLQHLATRAFLTLPGGECPHGVPGEMRTLIDAVKQSR 1071
            D P  RSGQ A +V   +Y+FGGCD V+  ND++ FD  THEW  V  + GP+PRAAFGMC GPG  DFT+ACG      SA SD+WSF+ R R W KLFESP+A YGVSICW+G  LL++ GT+G+EY   LYAF     S+V+V+T+G  PS+RYKH SF+  ++MYV GGG F+PTE  M + +LNL +L W++L  D +  S+ RTA +CC D E+ K WVFGGFD+D  RLQAFQ++D+ S  W  V  V    SP  RAFHSM+  +G+LF+ LGA+G   ++DVW+Y IRSTPP LQ LA  AFL LP   C   +P EM++LI++V+ +R
Sbjct:   85 DRPCARSGQSAVLVGDKIYVFGGCDGVVVYNDLHCFDTVTHEWRVVHSEGGPTPRAAFGMCVGPGDEDFTIACGSNTQFMSAYSDVWSFNTRHRTWTKLFESPKALYGVSICWYGRILLMYAGTTGLEYCNHLYAFNSLASSVVKVSTTGICPSRRYKHESFILNDNMYVFGGGCFAPTEGCMFISRLNLRSLEWKQLHVDGD-TSVARTAFSCCADPETLKVWVFGGFDADNTRLQAFQSYDMQSRKWENVASV---CSPPSRAFHSMIYSQGSLFLMLGANGKRKFNDVWQYRIRSTPPSLQMLAAHAFLRLPHSACRPAIPDEMQSLIESVRLTR 418
[Close]
BLAST of jgi.p|Trimin1|158100 vs. uniprot
Match: A0A836CDJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDJ9_9STRA)

HSP 1 Score: 327 bits (838), Expect = 1.230e-107
Identity = 155/297 (52.19%), Postives = 203/297 (68.35%), Query Frame = 1 
Query:   22 HSHHRWLRLRTFGDVPTLRSGQGAAVVAGSVYIFGGCDAVMQ-NDIYRFDVDTHEWCAVTCDDGPSPRAAFGMCSGPGQYDFTVACGCGLGERSAQSDIWSFDVRRRRWRKLFESPRAAYGVSICWHGSTLLLWGGTSGVEYYASLYAFTLHTGSIVRVNTSGCGPSKRYKHVSFVYGNDMYVCGGGTFSPTERSMGMHKLNLTTLVWQRLGDDREGVSIGRTACTCCFDVESSKAWVFGGFDSDAKRLQAFQTFDVVSNAWAEVGGVKAETSPAPRAFHSMVLCRGALFMFLGADG 909
            + H  WL L TFGD P  RSGQ + VV   +Y+FGGCD V+  ND++ FD   HEW  +  + GP+PRAAFGMC+GPG  DFT+ACG      SA S  WS+D RRR+W +LFESP+A YGVSICWHG  LL++ GT+G EY   LYAF L    +V+V+TSG  PS+RYKH S +  + MY+ GGG+F+PTE  M +++LNL +LVWQ++    +  S  RTA +CC D E+ K WVFGGFD+D  R+QAFQ +D+ SN W  V  V    SP  RAFHS++  +G+L++ LGA+G
Sbjct:    8 NQHREWLHLNTFGDRPCARSGQSSVVVRDKIYVFGGCDGVVDYNDLHCFDTVMHEWSVMHSEGGPTPRAAFGMCAGPGAEDFTIACGSNTQYMSAYSYGWSYDTRRRKWTELFESPKALYGVSICWHGHILLMYAGTTGSEYCNHLYAFDLRIAGVVKVSTSGSCPSRRYKHESVIVDDCMYILGGGSFAPTESCMYINQLNLRSLVWQQVKVQND-TSTPRTAFSCCVDPETLKVWVFGGFDADNTRIQAFQNYDLTSNEWKVVQTV---CSPDARAFHSVIYAQGSLYLMLGANG 300
[Close]
BLAST of jgi.p|Trimin1|158100 vs. uniprot
Match: A0A836C6J2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6J2_9STRA)

HSP 1 Score: 287 bits (735), Expect = 1.100e-93
Identity = 132/204 (64.71%), Postives = 158/204 (77.45%), Query Frame = 1 
Query:   37 WLRLRTFGDVPTLRSGQGAAVVAGSVYIFGGCDA-VMQNDIYRFDVDTHEWCAVTCDDGPSPRAAFGMCSGPGQYDFTVACGCGLGERSAQSDIWSFDVRRRRWRKLFESPRAAYGVSICWHGSTLLLWGGTSGVEYYASLYAFTLHTGSIVRVNTSGCGPSKRYKHVSFVYGNDMYVCGGGTFSPTERSMGMHKLNLTTLVWQ 645
            W +LRT G VP+  SGQGAAVV   VY+FGGCD  V  ND++ FDV T++WCA+ C +GPSPRAAFGMCSGPG+Y FTVACGCG+ + SA  D+WSFDVR   W KLFESP+A YGV ICW+  TLLL GGT GV Y  +LYAF L TG++  V TSG GPSKRYKH SF+ G DM+VCGGG F+PTER M M++LNL++LVW+
Sbjct:    2 WSQLRTCGKVPSSLSGQGAAVVDERVYMFGGCDGEVALNDVHCFDVQTNKWCAIVCQEGPSPRAAFGMCSGPGEYAFTVACGCGIEQMSALGDMWSFDVRHHTWSKLFESPQAMYGVPICWYDGTLLLHGGTMGVHYSDALYAFNLDTGTVAPVVTSGNGPSKRYKHESFIVGEDMFVCGGGAFAPTERRMDMYRLNLSSLVWR 205
[Close]
BLAST of jgi.p|Trimin1|158100 vs. uniprot
Match: A0A835Z6E7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6E7_9STRA)

HSP 1 Score: 280 bits (717), Expect = 3.360e-90
Identity = 132/257 (51.36%), Postives = 176/257 (68.48%), Query Frame = 1 
Query:   28 HHRWLRLRTFGDVPTLRSGQGAAVVAGSVYIFGGCDA-VMQNDIYRFDVDTHEWCAVTCDDGPSPRAAFGMCSGPGQYDFTVACGCGLGERSAQSDIWSFDVRRRRWRKLFESPRAAYGVSICWHGSTLLLWGGTSGVEYYASLYAFTLHTGSIVRVNTSGCGPSKRYKHVSFVYGNDMYVCGGGTFSPTERSMGMHKLNLTTLVWQRLGDDREGVSIGRTACTCCFDVESSKAWVFGGFDSDAKRLQAFQTFDVVS 795
            H  W+ L TFG+ P  RSG  A +V G +Y+FGGCD  V+ ND++ FD  THEW  +  +  P+PRAAFGMC+GPG  DFT+ACG      SA SD+WSF+ R R W +LFESP+A YGVSICW+G  LL++ GT+G+EY   LYAF   T S+++V+T+G  PS  YKH SF   +DMYV GGG F+PTE  M +  L+L +L W+++    +  SI RTA + C   E+SK WVFGGFD+D   LQ+FQ++D++S
Sbjct:   10 HREWVLLNTFGNPPCARSGHAAVIVRGKIYVFGGCDGDVVYNDLHCFDTVTHEWRVIMSEGAPTPRAAFGMCAGPGDEDFTIACGSNTQFMSAYSDVWSFNTRHRTWTQLFESPKALYGVSICWYGRMLLMYAGTAGLEYCNHLYAFHSLTSSVIKVSTTGVCPSIWYKHESFAVNDDMYVFGGGCFAPTEGRMFISWLDLRSLEWKQVQVQND-TSIPRTAFSSCVGPETSKVWVFGGFDADNTCLQSFQSYDMLS 265
[Close]
BLAST of jgi.p|Trimin1|158100 vs. uniprot
Match: A0A836CQE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQE2_9STRA)

HSP 1 Score: 263 bits (673), Expect = 1.140e-81
Identity = 144/350 (41.14%), Postives = 203/350 (58.00%), Query Frame = 1 
Query:   19 QHSHHRWLRLRTFGDVPTLRSGQGAAVVAGSVYIFGGC----DAV-MQNDIYRFDVDTHEWCAVTC--DDGPSPRAAFGMCSGPGQYDFTVACGCGLGERSAQSDIWSFDVRRRRWRKLF----ESPRAAYGVSICWHGSTLLLWGGTSGVEYYASLYAFTLHTGSIVRVNTSGCGPSKRYKHVSFVYGNDMYVCGGGTFSPTERSMGMHKLNLTTLVWQRLGDDREGVSIGRTACTCCFDVESSKAWVFGGFDSDAKRLQAFQTFDVVSNAWAEVGGVKAETS--------------PAPRAFHSMVLCRGALFMFLGADGNVCYDDVWRYSIRSTPPPLQHLATRAFL 993
            +  H +W++L+T G VP+ RSG   AVV   VY+FGGC    DA+   ND+Y FD+D+H W  VT   D  PS RA+FGMC+GP      VA G G+   S +SD+  FD R + W K+     ++P   YG ++C +GS LLL+GG++G+ Y   L+ + + T    ++ T+G  PS RYKH + V G+ MYV GGG F P + ++ +++L+L TLVW       E V   R A +C FD  +S  +++GGF  +  RLQ F  +D     WAE+    A+ +              P  RAFHS V   GAL++F GA+G+V Y+DVWR+ +RSTPP L  LA RA L
Sbjct:   24 RQEHQQWVKLQTSGTVPSPRSGHDVAVVGSKVYLFGGCGGENDAINCLNDMYTFDLDSHRWETVTAKGDSVPSARASFGMCAGPAANTIIVAGGTGVEMDSLRSDVLEFDTRTKLWSKITGDGEDAPSRFYGQTVCRYGSVLLLFGGSTGLHYTNDLFEYNMTTNCWRKLATTGKRPSPRYKHQAVVVGDAMYVIGGGCFKPEQAAIDLYRLDLRTLVWDTPAMGGE-VPRARVAHSCSFDPATSTIYLWGGFTGELSRLQDFFAYDTARAEWAEIKTPPADAAAPSAXXXXXXXXXXPYARAFHSAVFHDGALYVFSGANGDVRYNDVWRFKVRSTPPALGVLAARALL 372
[Close]
BLAST of jgi.p|Trimin1|158100 vs. uniprot
Match: A0A835ZFC9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFC9_9STRA)

HSP 1 Score: 249 bits (636), Expect = 5.450e-76
Identity = 140/356 (39.33%), Postives = 198/356 (55.62%), Query Frame = 1 
Query:   19 QHSHHRWLRLRTFGDVPTLRSGQGAAVVAGSVYIFGGC----DAV-MQNDIYRFDVDTHEWCAVTC--DDGPSPRAAFGMCSGPGQYDFTVACGCGLGERSAQSDIWSFDVRRRRWRKLF----ESPRAAYGVSICWHGSTLLLWGGTSGVEYYASLYAFTLHTGSIVRVNTSGCGPSKRYKHVSFVYGNDMYVCGGGTFSPTERSMGMHKLNLTTLVWQRLGDDREGVSIGRTACTCCFDVESSKAWVFGGFDSDAKRLQAFQTFDVVSNAWAEV--------------------GGVKAETSPAPRAFHSMVLCRGALFMFLGADGNVCYDDVWRYSIRSTPPPLQHLATRAFL 993
            +  H+RW++L+  G VP+ RSG   AVV   +Y+FGGC    DA+   ND+Y FD+D H W  +    ++ P+ RA+F MCSGP +    VA G G+   S +SDI  FD R RRW KL     ++P   YG ++C +G  LLL+GG++G+ Y   L+ + + T    ++ T G  PS RYKH + V G+ MYV GGG F P + ++ M+ LNL TLVW +       V   R A +C FD E+   +++GGF  +  RLQ F  +   +  W E+                           +P  RAFHS V  +GAL++F GA+G+V Y+DVWRY +RS+PP L  LA RA L
Sbjct:   29 RQEHNRWVKLQVCGTVPSPRSGHDVAVVGNKLYLFGGCGGENDAINCLNDMYTFDLDRHVWELIPHRGEEMPTARASFAMCSGPDEKTLIVAGGTGVEMDSLRSDILQFDTRTRRWIKLHRDGDDAPSKFYGQTVCRYGDVLLLFGGSTGLHYTNDLFEYNVVTNCWRKLVTQGRRPSPRYKHQAVVVGDFMYVIGGGCFKPEQSAIDMYCLNLRTLVWAQ-PRSAGAVPRARVAHSCSFDPETCTIYLWGGFTGELSRLQDFYAYHAPTGEWTEIRTAPPXXXXXXXXXXXXXXXXXXXXXVAPYARAFHSAVFYKGALYVFSGANGDVRYNDVWRYRMRSSPPALGVLAGRALL 383
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|158100 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CD99_9STRA1.570e-279100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZA21_9STRA2.520e-13353.35Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835Z6H5_9STRA1.990e-13152.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YN69_9STRA3.310e-12753.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z2J9_9STRA3.250e-12453.25Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CDJ9_9STRA1.230e-10752.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C6J2_9STRA1.100e-9364.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z6E7_9STRA3.360e-9051.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CQE2_9STRA1.140e-8141.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZFC9_9STRA5.450e-7639.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_5contigContig_5:1040542..1041618 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|158100|e_gw1.5.266.1
BRITEko00000,ko04131
KEGG koko:K20285
Descriptionnitrile biosynthetic process
COG categoryP
Max annot lvl2759|Eukaryota
EggNOG OGsKOG0379@1|root,KOG0379@2759|Eukaryota
Evalue2.11e-75
Seed ortholog2880.D7FP90
Hectar predicted targeting categoryother localisation
TranscriptId158422
TrackFilteredModels1
ProteinId158100
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158100gene_2376Tribonema minus UTEX_B_3156 geneContig_5 1040542..1041618 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_2376_1exon_2376_1Tribonema minus UTEX_B_3156 exonContig_5 1040542..1041618 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_2376CDS_2376Tribonema minus UTEX_B_3156 CDSContig_5 1040542..1041618 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158100Trimin1|158100|e_gw1.5.266.1Tribonema minus UTEX_B_3156 polypeptideContig_5 1040542..1041618 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_2376 ID=mRNA_2376|Name=jgi.p|Trimin1|158100|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1077bp|location=Sequence derived from alignment at Contig_5:1040542..1041618- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCTGTCTGCAAAGCCACAACACAGTCATCATCGGTGGCTGCGGCTTCG
CACTTTCGGCGATGTGCCGACGTTACGCAGCGGCCAGGGCGCTGCCGTCG
TTGCCGGAAGTGTATACATCTTCGGCGGGTGTGATGCCGTCATGCAGAAT
GATATTTATCGTTTCGACGTCGACACGCACGAGTGGTGTGCTGTGACGTG
TGATGATGGCCCCAGCCCGCGTGCCGCGTTCGGGATGTGTTCCGGGCCGG
GACAATACGACTTTACTGTTGCGTGTGGGTGCGGTCTCGGGGAGAGGAGT
GCGCAGAGTGACATCTGGTCGTTCGACGTGAGGCGCCGCCGGTGGCGGAA
ACTCTTCGAGTCGCCACGTGCCGCGTATGGCGTATCGATCTGTTGGCACG
GCAGCACTCTGCTTCTGTGGGGGGGCACATCGGGCGTGGAGTACTACGCT
TCGCTATACGCATTCACCCTGCACACTGGCAGCATTGTGCGAGTGAATAC
ATCTGGATGTGGACCGTCCAAGCGCTACAAACACGTGAGCTTTGTATACG
GCAATGACATGTATGTATGCGGGGGCGGCACTTTCTCACCTACCGAAAGG
AGCATGGGAATGCACAAACTGAATCTCACGACGCTCGTGTGGCAGCGCTT
AGGTGATGATCGAGAAGGCGTCTCTATAGGCAGGACTGCTTGCACATGCT
GTTTTGACGTTGAGAGCTCGAAAGCATGGGTATTCGGTGGATTCGATTCG
GATGCAAAACGTCTGCAAGCCTTTCAAACATTTGACGTCGTGTCCAACGC
ATGGGCAGAAGTCGGCGGGGTCAAAGCTGAGACAAGTCCGGCGCCGCGTG
CCTTTCACTCCATGGTCTTGTGCAGAGGAGCACTGTTTATGTTTCTCGGT
GCGGACGGCAACGTATGCTACGACGATGTTTGGCGGTACTCTATTCGCAG
CACCCCGCCTCCCCTTCAGCATCTGGCTACTCGAGCATTTCTAACGCTTC
CGGGAGGTGAATGCCCACACGGGGTACCTGGCGAGATGAGAACGCTCATT
GATGCGGTGAAGCAGTCACGATCGTAA
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protein sequence of jgi.p|Trimin1|158100

>Trimin1|158100|e_gw1.5.266.1 ID=Trimin1|158100|e_gw1.5.266.1|Name=jgi.p|Trimin1|158100|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=359bp
MLSAKPQHSHHRWLRLRTFGDVPTLRSGQGAAVVAGSVYIFGGCDAVMQN
DIYRFDVDTHEWCAVTCDDGPSPRAAFGMCSGPGQYDFTVACGCGLGERS
AQSDIWSFDVRRRRWRKLFESPRAAYGVSICWHGSTLLLWGGTSGVEYYA
SLYAFTLHTGSIVRVNTSGCGPSKRYKHVSFVYGNDMYVCGGGTFSPTER
SMGMHKLNLTTLVWQRLGDDREGVSIGRTACTCCFDVESSKAWVFGGFDS
DAKRLQAFQTFDVVSNAWAEVGGVKAETSPAPRAFHSMVLCRGALFMFLG
ADGNVCYDDVWRYSIRSTPPPLQHLATRAFLTLPGGECPHGVPGEMRTLI
DAVKQSRS*
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mRNA from alignment at Contig_5:1040542..1041618-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_2376 ID=mRNA_2376|Name=jgi.p|Trimin1|158100|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1077bp|location=Sequence derived from alignment at Contig_5:1040542..1041618- (Tribonema minus UTEX_B_3156 )
ATGCTGTCTGCAAAGCCACAACACAGTCATCATCGGTGGCTGCGGCTTCG
CACTTTCGGCGATGTGCCGACGTTACGCAGCGGCCAGGGCGCTGCCGTCG
TTGCCGGAAGTGTATACATCTTCGGCGGGTGTGATGCCGTCATGCAGAAT
GATATTTATCGTTTCGACGTCGACACGCACGAGTGGTGTGCTGTGACGTG
TGATGATGGCCCCAGCCCGCGTGCCGCGTTCGGGATGTGTTCCGGGCCGG
GACAATACGACTTTACTGTTGCGTGTGGGTGCGGTCTCGGGGAGAGGAGT
GCGCAGAGTGACATCTGGTCGTTCGACGTGAGGCGCCGCCGGTGGCGGAA
ACTCTTCGAGTCGCCACGTGCCGCGTATGGCGTATCGATCTGTTGGCACG
GCAGCACTCTGCTTCTGTGGGGGGGCACATCGGGCGTGGAGTACTACGCT
TCGCTATACGCATTCACCCTGCACACTGGCAGCATTGTGCGAGTGAATAC
ATCTGGATGTGGACCGTCCAAGCGCTACAAACACGTGAGCTTTGTATACG
GCAATGACATGTATGTATGCGGGGGCGGCACTTTCTCACCTACCGAAAGG
AGCATGGGAATGCACAAACTGAATCTCACGACGCTCGTGTGGCAGCGCTT
AGGTGATGATCGAGAAGGCGTCTCTATAGGCAGGACTGCTTGCACATGCT
GTTTTGACGTTGAGAGCTCGAAAGCATGGGTATTCGGTGGATTCGATTCG
GATGCAAAACGTCTGCAAGCCTTTCAAACATTTGACGTCGTGTCCAACGC
ATGGGCAGAAGTCGGCGGGGTCAAAGCTGAGACAAGTCCGGCGCCGCGTG
CCTTTCACTCCATGGTCTTGTGCAGAGGAGCACTGTTTATGTTTCTCGGT
GCGGACGGCAACGTATGCTACGACGATGTTTGGCGGTACTCTATTCGCAG
CACCCCGCCTCCCCTTCAGCATCTGGCTACTCGAGCATTTCTAACGCTTC
CGGGAGGTGAATGCCCACACGGGGTACCTGGCGAGATGAGAACGCTCATT
GATGCGGTGAAGCAGTCACGATCGTAA
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Coding sequence (CDS) from alignment at Contig_5:1040542..1041618-

>mRNA_2376 ID=mRNA_2376|Name=jgi.p|Trimin1|158100|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1077bp|location=Sequence derived from alignment at Contig_5:1040542..1041618- (Tribonema minus UTEX_B_3156 )
ATGCTGTCTGCAAAGCCACAACACAGTCATCATCGGTGGCTGCGGCTTCG
CACTTTCGGCGATGTGCCGACGTTACGCAGCGGCCAGGGCGCTGCCGTCG
TTGCCGGAAGTGTATACATCTTCGGCGGGTGTGATGCCGTCATGCAGAAT
GATATTTATCGTTTCGACGTCGACACGCACGAGTGGTGTGCTGTGACGTG
TGATGATGGCCCCAGCCCGCGTGCCGCGTTCGGGATGTGTTCCGGGCCGG
GACAATACGACTTTACTGTTGCGTGTGGGTGCGGTCTCGGGGAGAGGAGT
GCGCAGAGTGACATCTGGTCGTTCGACGTGAGGCGCCGCCGGTGGCGGAA
ACTCTTCGAGTCGCCACGTGCCGCGTATGGCGTATCGATCTGTTGGCACG
GCAGCACTCTGCTTCTGTGGGGGGGCACATCGGGCGTGGAGTACTACGCT
TCGCTATACGCATTCACCCTGCACACTGGCAGCATTGTGCGAGTGAATAC
ATCTGGATGTGGACCGTCCAAGCGCTACAAACACGTGAGCTTTGTATACG
GCAATGACATGTATGTATGCGGGGGCGGCACTTTCTCACCTACCGAAAGG
AGCATGGGAATGCACAAACTGAATCTCACGACGCTCGTGTGGCAGCGCTT
AGGTGATGATCGAGAAGGCGTCTCTATAGGCAGGACTGCTTGCACATGCT
GTTTTGACGTTGAGAGCTCGAAAGCATGGGTATTCGGTGGATTCGATTCG
GATGCAAAACGTCTGCAAGCCTTTCAAACATTTGACGTCGTGTCCAACGC
ATGGGCAGAAGTCGGCGGGGTCAAAGCTGAGACAAGTCCGGCGCCGCGTG
CCTTTCACTCCATGGTCTTGTGCAGAGGAGCACTGTTTATGTTTCTCGGT
GCGGACGGCAACGTATGCTACGACGATGTTTGGCGGTACTCTATTCGCAG
CACCCCGCCTCCCCTTCAGCATCTGGCTACTCGAGCATTTCTAACGCTTC
CGGGAGGTGAATGCCCACACGGGGTACCTGGCGAGATGAGAACGCTCATT
GATGCGGTGAAGCAGTCACGATCGTAA
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