mRNA_2167 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|158492
Unique NamemRNA_2167
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Match: A0A835YWV7_9STRA (FAD-binding PCMH-type domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWV7_9STRA)

HSP 1 Score: 434 bits (1117), Expect = 3.770e-154
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1
Query:    1 GHSDYEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYTEFEYDAATGLLRTGISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKVSRS 645
            GHSDYEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYTEFEYDAATGLLRTGISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKVSRS
Sbjct:    1 GHSDYEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYTEFEYDAATGLLRTGISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKVSRS 215          
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Match: A0A0R3MB10_9BRAD (FAD-binding PCMH-type domain-containing protein n=2 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=A0A0R3MB10_9BRAD)

HSP 1 Score: 234 bits (597), Expect = 1.540e-70
Identity = 118/204 (57.84%), Postives = 148/204 (72.55%), Query Frame = 1
Query:   28 YQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYTEFEYDAATGLLRTGISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKVS 639
            YQYAT+S+     MSPAAI+ PQ+PNAD DVK AI +AA  G+ +AVRTGGH Y G SST   NIQLD+S AY+E+EYD  TGLLR GIS+ L++F  KL E GLF+  GQC +V +GGH QTGGYGQL+RAFGLF D +V+  I  AD   + +  DS V AD++LF+AVLGG PGN+G++TH+TIRP  D DH  +   K +
Sbjct:   11 YQYATTSNPA-ANMSPAAIICPQHPNADPDVKKAILYAAANGIGVAVRTGGHAYSGTSSTTSNNIQLDLSEAYSEWEYDTQTGLLRLGISYSLLEFNNKLREAGLFMPTGQCYNVHVGGHVQTGGYGQLARAFGLFSDQLVSFEIFLADGSKKTIAVDSPVQADRDLFFAVLGGGPGNYGIVTHITIRPGKDADHKYSRAYKYA 213          
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Match: A0A350G0D2_9CHLR (FAD-binding PCMH-type domain-containing protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A350G0D2_9CHLR)

HSP 1 Score: 234 bits (596), Expect = 2.780e-70
Identity = 121/211 (57.35%), Postives = 150/211 (71.09%), Query Frame = 1
Query:    1 GHSDYEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYTEFEYDAATGLLRTGISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMK 633
            G  DYE +RYQYATSS   +  MSPAAI+ PQ+PNAD DV  AI++AA   +AIAVRTGGH Y G SST   NIQLD+S AY E++Y+  TGLL+ GISH L++F  +L E GLF+  GQC  V +GGHAQTGGYGQLSRAFGLF D IV+  I  AD   R +  DS    D++LF+AVLGG PGN+G++T +T+RP+ D DH  +   K
Sbjct:   14 GDKDYEFYRYQYATSSQPRE-KMSPAAIIRPQHPNADPDVLTAIRYAAANKLAIAVRTGGHAYSGTSSTTKKNIQLDLSEAYNEWDYNPETGLLQVGISHTLLEFNTRLKEAGLFMPTGQCYDVHVGGHAQTGGYGQLSRAFGLFSDQIVSFEIFLADGTKRVVAADSPDQFDKDLFFAVLGGGPGNYGIVTRITVRPYRDSDHRYSRAYK 223          
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Match: A0A015J1B6_RHIIW (FAD-binding PCMH-type domain-containing protein n=6 Tax=Rhizophagus TaxID=1129544 RepID=A0A015J1B6_RHIIW)

HSP 1 Score: 212 bits (540), Expect = 4.900e-62
Identity = 112/211 (53.08%), Postives = 148/211 (70.14%), Query Frame = 1
Query:   10 DYEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYTEFEYDAATGLLRT-GISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKVS 639
            DY+   YQYA+SSH  DG + PAAI+       D+DV  AI++A++  +A+AVRTGGHQY G SST G NIQLD+S+ Y +F++D       T GIS  L +F AKL E+  FV HGQC +V +GGH QTGGYGQL+R+FGLF D+++  RIITAD +VR       VA  ++LF+AVLGGSPGNFGVLTH T+    D+D+PN+ G++ +
Sbjct:   33 DYDAQSYQYASSSHLEDGIIQPAAIIKAAD---DSDVIKAIKYASENKIAVAVRTGGHQYSGASSTSGKNIQLDLSQTYKDFDWDDENCTSVTLGISFPLGEFNAKLREKNRFVPHGQCQYVNLGGHIQTGGYGQLARSFGLFSDNVIKFRIITADGQVRW------VAQGEDLFFAVLGGSPGNFGVLTHATLHVFRDQDYPNSRGLRAA 234          
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Match: A0A8H6VGR0_9PEZI (FAD-linked oxidoreductase n=1 Tax=Pseudocercospora fuligena TaxID=685502 RepID=A0A8H6VGR0_9PEZI)

HSP 1 Score: 206 bits (524), Expect = 5.230e-60
Identity = 101/214 (47.20%), Postives = 141/214 (65.89%), Query Frame = 1
Query:   13 YEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYTE------FEYDAATGLLRTGISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKV 636
            +E +RYQYATSSHG D  M+P  ++ P+      D+K A+++A ++G+A+A+RTGGHQY G SSTGG NIQLD+ R +          +      + T +SH + +    L    LFV HGQCSHV +GGH QTGGYGQL R+FGLFGDH+ ++ +I AD    E+TR S    D +LF+A+LGGSPGNFGV+TH+ +  H D+++  A G++ 
Sbjct:   58 WENNRYQYATSSHGIDHDMNPQIVIQPRNKE---DIKTALKYAKEQGIAVAIRTGGHQYSGASSTGGKNIQLDLQRTFRSPDDLKVLPFKDGKAFVYTSVSHSISELNTFLGSNSLFVPHGQCSHVHVGGHVQTGGYGQLGRSFGLFGDHVRSLTLINADSLEIEVTRSS----DPDLFYALLGGSPGNFGVITHIVLEVHQDKNYSGAMGLRA 264          
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Match: A0A397U028_9GLOM (FAD-binding PCMH-type domain-containing protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397U028_9GLOM)

HSP 1 Score: 207 bits (527), Expect = 5.610e-60
Identity = 108/213 (50.70%), Postives = 149/213 (69.95%), Query Frame = 1
Query:    1 GHSDYEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYTEFEYDAATGLLRT-GISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKV 636
            G  +YE+  YQYA+SS+  +G + PA I+  +    ++DV  AI +A+D+ +A+A+RTGGHQY G SST G NIQLD+S+ Y +F +D       T GIS  L +F AKL E+  FV HGQC  V +GGH QTGGYGQL+R+FGL  DH+   RIITAD + R + R+   + D++LF+AVLGGSPGNFGVLTH+T++   D+D+PN+ G++ 
Sbjct:   38 GDDNYEKECYQYASSSYLEEGIIQPAYIIKAKN---ESDVIKAINYASDKKIAVAIRTGGHQYSGASSTNGNNIQLDLSQTYKDFTWDNEDCTSVTIGISFSLGEFNAKLREKNRFVPHGQCQSVNVGGHVQTGGYGQLARSFGLLADHVEKFRIITADGQARWVVRN--FSQDKDLFFAVLGGSPGNFGVLTHITLKVFRDQDYPNSRGLRA 245          
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Match: A0A1Y2X9I8_9PEZI (FAD-binding PCMH-type domain-containing protein n=3 Tax=Daldinia TaxID=42360 RepID=A0A1Y2X9I8_9PEZI)

HSP 1 Score: 205 bits (521), Expect = 6.200e-60
Identity = 106/214 (49.53%), Postives = 144/214 (67.29%), Query Frame = 1
Query:   13 YEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAY------TEFEYDAATGLLRTGISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKV 636
            YEE +YQYATS++G +  ++P  IV P+      D+ LA+++A ++ +A+A++TGGHQY G SST   NIQLD+  ++      T FE D      RT +S  L +F A +AE  LFV HGQC+ V +GGH QTGGYGQL R+FGLFGDH++++ II +D   +E+T+    A D +LFWA LGGSPGN GVLTH TIR H D+D+  + GMK 
Sbjct:   19 YEEVKYQYATSTYGKERDLNPGLIVQPKTKE---DIVLALKYAKEKKIAVAIKTGGHQYSGASSTSAPNIQLDLEHSFRGPEDRTIFEKDGKA-YARTSVSWSLGEFNAWVAEHKLFVPHGQCTEVHVGGHVQTGGYGQLGRSFGLFGDHVLSLEIIDSDGNFKEITK----ATDPDLFWAFLGGSPGNLGVLTHFTIRMHRDQDYNGSRGMKA 224          
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Match: A0A8H4AS40_GIGMA (FAD-binding domain-containing protein n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H4AS40_GIGMA)

HSP 1 Score: 206 bits (523), Expect = 1.160e-59
Identity = 110/226 (48.67%), Postives = 151/226 (66.81%), Query Frame = 1
Query:    1 GHSDYEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYT------------EFEYDAATGLLRT-GISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKVS 639
            G +DYE+  YQYA+SS+  +  + PA I+ P     D DV  AI++A+D  +A+AVRTGGHQYCG SST G NIQLD+S+ Y             +F ++     L T G+S+ L DF AKL ++  FV HGQC +V +GGH QTGGYG L R+FGL  D++   RIITAD ++R + +++    D++LF+AVLGGSPGNFGV+THVT+R   DEDH N+ G++ +
Sbjct:   18 GDADYEQQSYQYASSSYLEEDIVRPAVIIQPAD---DDDVIKAIKYASDNKIAVAVRTGGHQYCGASSTSGKNIQLDLSQTYNKDPIQFPTKDPKDFNWENEDCTLVTFGVSYSLGDFNAKLRDKNRFVPHGQCKYVNLGGHVQTGGYGMLGRSFGLLSDYVEKFRIITADGQIRWIEKNNN--EDKDLFFAVLGGSPGNFGVITHVTLRVFKDEDHRNSRGLRAA 238          
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Match: A0A1D1YKS3_9ARAE (6-hydroxy-D-nicotine oxidase (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YKS3_9ARAE)

HSP 1 Score: 206 bits (523), Expect = 1.290e-59
Identity = 108/211 (51.18%), Postives = 143/211 (67.77%), Query Frame = 1
Query:   10 DYEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYTEFEY--DAATGLLRTGISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKV 636
            DYE   YQYA+SSH  D  + PA I+       D+DV  AI++A D  +A+A+RTGGHQY G SST G NIQLD+S  Y +F++  D  T L+R G+S  L +F   +  +  FV HGQC HV +GGH  TGGYGQL R+FGLF DH+  IRIITAD + +E+  +     + +LF+AVLGGSPGNFGV+TH+T++ H DED+PN+ G + 
Sbjct:   16 DYEATSYQYASSSHLKDKIIEPAVIIAAVD---DSDVIKAIKYARDNNLAVAIRTGGHQYSGASSTNGDNIQLDLSYTYRDFDWQNDDCT-LVRLGVSFSLDEFNKSIGGKKRFVPHGQCQHVHVGGHLHTGGYGQLGRSFGLFSDHVRKIRIITADGKTQEIDHND----NPDLFYAVLGGSPGNFGVVTHITLQVHRDEDYPNSRGFRA 218          
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Match: A0A094EVJ2_9PEZI (FAD-binding PCMH-type domain-containing protein (Fragment) n=1 Tax=Pseudogymnoascus sp. VKM F-4517 (FW-2822) TaxID=1420911 RepID=A0A094EVJ2_9PEZI)

HSP 1 Score: 196 bits (499), Expect = 1.390e-59
Identity = 102/214 (47.66%), Postives = 141/214 (65.89%), Query Frame = 1
Query:   13 YEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAY------TEFEYDAATGLLRTGISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKV 636
            Y+ ++YQYA+SS+  D  M+P  I+ P+  N   D+ LA+++A  + +A+A+RTGGHQY G SST  +NIQLD+ + +      T FE D  T  +RT +S  L    A L    LFV HGQC  VR+GGH QTGGYGQL R+FGLFGDH++++ ++  +   +E+T+    A D ELF+A+LGGSPGNFGVLTH TI  H D D+  + G+K 
Sbjct:   19 YQNNKYQYASSSYEIDHNMNPGLIIQPENKN---DIVLALKYAKAQKIAVAIRTGGHQYSGASSTSASNIQLDLKKTFRQPDDQTHFEKDGRT-FVRTSVSWSLGALNAYLTRHKLFVPHGQCIDVRLGGHVQTGGYGQLGRSFGLFGDHVLSLEMVDHEGNFKEVTK----ATDPELFYAILGGSPGNFGVLTHFTIEVHRDSDYKGSRGLKA 224          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YWV7_9STRA3.770e-154100.00FAD-binding PCMH-type domain-containing protein (F... [more]
A0A0R3MB10_9BRAD1.540e-7057.84FAD-binding PCMH-type domain-containing protein n=... [more]
A0A350G0D2_9CHLR2.780e-7057.35FAD-binding PCMH-type domain-containing protein n=... [more]
A0A015J1B6_RHIIW4.900e-6253.08FAD-binding PCMH-type domain-containing protein n=... [more]
A0A8H6VGR0_9PEZI5.230e-6047.20FAD-linked oxidoreductase n=1 Tax=Pseudocercospora... [more]
A0A397U028_9GLOM5.610e-6050.70FAD-binding PCMH-type domain-containing protein n=... [more]
A0A1Y2X9I8_9PEZI6.200e-6049.53FAD-binding PCMH-type domain-containing protein n=... [more]
A0A8H4AS40_GIGMA1.160e-5948.67FAD-binding domain-containing protein n=1 Tax=Giga... [more]
A0A1D1YKS3_9ARAE1.290e-5951.186-hydroxy-D-nicotine oxidase (Fragment) n=1 Tax=An... [more]
A0A094EVJ2_9PEZI1.390e-5947.66FAD-binding PCMH-type domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_6contigContig_6:1025148..1028772 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|158492|e_gw1.6.189.1
Descriptionfad binding domain-containing protein
COG categoryC
Max annot lvl4751|Fungi
EggNOG OGsCOG0277@1|root,2QUMR@2759|Eukaryota,39PB1@33154|Opisthokonta,3P020@4751|Fungi
Evalue6.73e-64
Seed ortholog78898.MVEG_00134T0
Hectar predicted targeting categoryother localisation
TranscriptId158814
TrackFilteredModels1
ProteinId158492
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158492gene_2167Tribonema minus UTEX_B_3156 geneContig_6 1025148..1028772 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|158492Trimin1|158492|e_gw1.6.189.1Tribonema minus UTEX_B_3156 polypeptideContig_6 1025148..1028772 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_2167_3exon_2167_3Tribonema minus UTEX_B_3156 exonContig_6 1025148..1025315 -
exon_2167_2exon_2167_2Tribonema minus UTEX_B_3156 exonContig_6 1026781..1026971 -
exon_2167_1exon_2167_1Tribonema minus UTEX_B_3156 exonContig_6 1028484..1028772 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_2167CDS_2167Tribonema minus UTEX_B_3156 CDSContig_6 1028484..1028772 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_2167 ID=mRNA_2167|Name=jgi.p|Trimin1|158492|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=648bp|location=Sequence derived from alignment at Contig_6:1025148..1028772- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GGCCATTCTGACTACGAGGAGCACCGCTACCAGTACGCGACGTCATCGCA
CGGCCACGACGGCGCCATGTCGCCCGCCGCCATCGTCTACCCGCAGTACC
CCAACGCGGACGCCGACGTGAAGCTCGCGATCCAGTGGGCTGCGGATCGT
GGCGTCGCCATCGCGGTGCGCACCGGCGGGCACCAGTACTGCGGCGTGTC
GTCCACAGGCGGCGCCAACATACAGCTGGACATGAGCCGCGCGTACACCG
AGTTTGAGTACGACGCCGCCACGGGGCTGCTGCGCACGGGCATCAGCCAC
AAGCTCATAGACTTCCGCGCGAAGCTCGCCGAGAGGGGCCTCTTTGTGGC
GCACGGCCAGTGCTCCCACGTGCGCATCGGCGGGCACGCGCAGACCGGCG
GTTACGGGCAGCTGAGCCGTGCCTTCGGCCTGTTTGGCGACCACATCGTG
GCTATTAGGATCATCACTGCAGACCAGGAGGTGCGCGAGCTCACGCGTGA
CAGCGCCGTCGCGGCTGACCAGGAGCTCTTCTGGGCCGTCCTCGGCGGCA
GCCCCGGCAACTTTGGCGTGCTGACTCACGTGACCATAAGGCCGCACCAC
GACGAGGACCACCCCAACGCGCACGGGATGAAGGTGAGCAGAAGTTGA
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protein sequence of jgi.p|Trimin1|158492

>Trimin1|158492|e_gw1.6.189.1 ID=Trimin1|158492|e_gw1.6.189.1|Name=jgi.p|Trimin1|158492|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=216bp
GHSDYEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADR
GVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYTEFEYDAATGLLRTGISH
KLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIV
AIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHH
DEDHPNAHGMKVSRS*
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mRNA from alignment at Contig_6:1025148..1028772-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_2167 ID=mRNA_2167|Name=jgi.p|Trimin1|158492|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3625bp|location=Sequence derived from alignment at Contig_6:1025148..1028772- (Tribonema minus UTEX_B_3156 )
GGCCATTCTGACTACGAGGAGCACCGCTACCAGTACGCGACGTCATCGCA CGGCCACGACGGCGCCATGTCGCCCGCCGCCATCGTCTACCCGCAGTACC CCAACGCGGACGCCGACGTGAAGCTCGCGATCCAGTGGGCTGCGGATCGT GGCGTCGCCATCGCGGTGCGCACCGGCGGGCACCAGTACTGCGGCGTGTC GTCCACAGGCGGCGCCAACATACAGCTGGACATGAGCCGCGCGTACACCG AGTTTGAGTACGACGCCGCCACGGGGCTGCTGCGCACGGGTGGGTGAGCT GTGCGTGATATGAAGTTGATGTTAAATTCAACTTGAAGATGCCATCAGTG AGTACATCGACAGCTCAGCTTACTAATAGGCTCAGGCTGGCGTTTGCGAT AGTATTGAATTAAGTGTACTGCGGCGTGTCGTCCACTGGGGGCGCCAATG TGCAGCTCGACATGAGCCGTGCGAGCACCAAGTTTGAGTACGACGTCGCC ACGGGCAGCGTTGTTGATCCCGGCACTTTGAGGCACTCGCGCCCGTGCTC CCGTGGGAGTAGCCAGGATCTGGCTCGCTCCCGGCACTCCCGGCTCAAGG ACTTTGAAGTGAGTTATGAAGTAATTGAAGTTTTGCGCTAGCCGTGGCCC GGGGCCCGTGCTCTGCCTGCGCTGCTGCTACATTTACGTTTCAAAGTTTG AAAAACAGTTGTCTTACTTCACCCGGTTCGTTCAACGAGTTGAACTGCAC AGGCGCGTGTGTTGTGAGAGAGTGCTGTCAGAGAGTGTGAGGTGGTGAGG AGAGTGCCGTGTAGGAGTGCCGTGTGCCACAAATGAGCTGAAACTCCAAC TAGCGTTGGGCTAACTTCAATTAGGGTCCGGATAACTTCAACTAGGGTTA GCCGCGAGTGCCGGGAGCACCCTTCAGATCCTGGTCGCTCCCTTGCTCCC GGTAACTCCCTTCCCCCCCCGGGGGCACGGGATTCACAACACTGGCCACG GGGCTGCTGCGCGCGCCGCCGGGTGGGTGCGCTGCGTGTGAGATGAGTTT GAAAGAAACTTATGCTTGAAGTTGAAGTACATTGCCCTGCTGGCATTTGC GATGGACAGTGCCACCGTGTGCGCGGCCCGCGGGCGGTCCAGGCTCTGTT GGTGTCACATGGTGACGCGTCTCAACGGATGCGCAAGTGTCGGGCATGCA CCACAGTGACTCAGTGACTGTGACAAAGCAATTGCATTGATGCATCAACT TGAACCTGGTGACCAGTGCGCACACTGCTAGCATTACATGCATGGGCGGG GGGCGCCTCTGGTGTCTTGTGCAAGCCTTAGCAAGGAAAGGGCGTGCCAG GGGCTACCTCAGGCTGCTTGCACAGCCTGACTACTAGTAGTACTTGCAGC GAAGCGCAGCGTGGTGCATATTACCTTTTGGTGTACTCAGTCTAGTAGCT GGAGGTGCCCCAGTCCTGGCAGTCTCCCGTCAGATTCTTCAGTAACTTCC TGCCATGTGCAACCAAGCACTCACTGGCAGCGTAGAGCAGGCATCACATT CAGAATGGCAAGTCACACAACGAGTTCACAGTTCAGACGTGTTGAAGTTG GTCCTGTTGAGATGATCACTGCTTTCTTAGCAGGTTTCACTTGAAGTCGT GCACTTGACATTGCAGTTCGTTCGAGACTCTGCCAGTGTTCACAATCAGT TTGAGATCTTTTGCGTTGGTGTTGCAGCAACCCTGAGCTAGAATGCCCAG GCTTGCTGTGCTTTTGTACTAATATCCCGCGCTCTCAACCGCCATGTGCA GGCATCAGCCACAAGCTCATAGACTTCCGCGCGAAGCTCGCCGAGAGGGG CCTCTTTGTGGCGCACGGCCAGTGCTCCCACGTGCGCATCGGCGGGCACG CGCAGACCGGCGGTTACGGGCAGCTGAGCCGTGCCTTCGGCCTGTTTGGC GACCACATCGTGGCTATTAGGATCATCACTGCAGACCAGGAGGTGTGTGC GTTGATTGACTCATGCGCGCGCGGATATCGTAGAGCCTGCTAGTGTCTCA AACAAATAATTACTGAGCTTGAGCTTTACTGACAAGCCTGTTTGCACCAC ATCGTGGCCATCAGGATCATCACCGCAGACCAGGAGCAGTGTGTTAAATC GATTGACTCGTGCGCGCACCAATAATGTGAAGCCTGTTGGTGTTATCATC GCGCTTGAGCCCACTGACAAGCCCGTGTGGGGACCGCATCGTAGCCATCA GGTACTGCAGACCAAGAGGTGTGACACAGTGTGTGAAGCCTGCGCCTATG AATGTGTAATTTCTTTTTACTCCGCGATGAACAGTACAGTACACATACCG TGAAGCTCACTGATGTTAACATCTTGCCGAGCCTCTGTGGCAGCTGCCAT TGTGAACTGGTTCGTGGCCATCAAGACTGCGTGAGGTAAATGTGTGTTTG GAGCTCGCGCAAATGCATATGCACTGTGGAGCGCAACAGTGCTTCTTGTC ATCCATGGCATTCCAAGCCACTGTGAAAACCGCATCAGGCCCGTGAGCAA TGATTGAGCATCACCACGGCTCACCAGGGCATCAGCGTAAAGACTGTACA TATGCTCTGTGCATATCTGTGGCTCGTGATTGTGTGATCTGTACTTTGCG CTTGTGCTTGATCAACATACCACCAGCGCAGGCGGGCAGGCACTCTACTC CTGCAAACCTCATCGTTGTCGCGATCGCTGCAGGCGCGCGAGCTCTCACT GCCGCGCAAGAGCGCTGGTACTCAACACCGTGAGTCAACGGTGTGCGCAT ACAGCACCTACACTGTATTGCACTTGCGCGTGATCAATATGCTGCCAGCT CACACGGCAGGTACACCTCCATAAGCCTGCTCGCTGCTGCGATCACCGCA AGTGCGCAAACTCTTGCTGTCACAGAAGAGCGCTGGTACTCAATGGTGTG CGCATATACAGCATCAACACATTCACGACGCACCCTGCCGCTGCGTTGCT AACCCTGCAGCTGCGAGCTGCTGCAGCACCTACGCATTCACGAGTCCTGT TCGCTGCTGCAGCCGCTGCCGCAGTGCTGGTGCGCGAGCTCTCGCGCGAC AGCACCGTCTCATAGTCCGGCCATCGGCGTCACCTCAGCGTGAAGCCTGT GCGTACTACACCATGCTACACTGTCTCCTTCTGCGTGTTGTGCTGGTAGG TAGTACTTGGTGTTCAGCACCTACACATTCGCGAGCGCTGCTCGCCGCTG CGGCCGCTGCACGTGCGCGAGCTCACGCGCGACAGCCCTGTCTCATAGTC TGGCCATCAGCGTCACCTCAGCGCGAAGCCTGTGCGCACGACACCATACT ACACTGTCTCCTTCTGCGTATTGTGCTGATAAGTACTTGGCAGCAGAATC GTGGTGAGCACTTGCCTACACGCTCATGAATCCTGCTCGCTGCTGCGGCC GCTGCAGGTGCGCGAGCTCACGCGTGACAGCGCCGTCGCGGCTGACCAGG AGCTCTTCTGGGCCGTCCTCGGCGGCAGCCCCGGCAACTTTGGCGTGCTG ACTCACGTGACCATAAGGCCGCACCACGACGAGGACCACCCCAACGCGCA CGGGATGAAGGTGAGCAGAAGTTGA
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Coding sequence (CDS) from alignment at Contig_6:1025148..1028772-

>mRNA_2167 ID=mRNA_2167|Name=jgi.p|Trimin1|158492|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=648bp|location=Sequence derived from alignment at Contig_6:1025148..1028772- (Tribonema minus UTEX_B_3156 )
GGCCATTCTGACTACGAGGAGCACCGCTACCAGTACGCGACGTCATCGCA
CGGCCACGACGGCGCCATGTCGCCCGCCGCCATCGTCTACCCGCAGTACC
CCAACGCGGACGCCGACGTGAAGCTCGCGATCCAGTGGGCTGCGGATCGT
GGCGTCGCCATCGCGGTGCGCACCGGCGGGCACCAGTACTGCGGCGTGTC
GTCCACAGGCGGCGCCAACATACAGCTGGACATGAGCCGCGCGTACACCG
AGTTTGAGTACGACGCCGCCACGGGGCTGCTGCGCACGGGCATCAGCCAC
AAGCTCATAGACTTCCGCGCGAAGCTCGCCGAGAGGGGCCTCTTTGTGGC
GCACGGCCAGTGCTCCCACGTGCGCATCGGCGGGCACGCGCAGACCGGCG
GTTACGGGCAGCTGAGCCGTGCCTTCGGCCTGTTTGGCGACCACATCGTG
GCTATTAGGATCATCACTGCAGACCAGGAGGTGCGCGAGCTCACGCGTGA
CAGCGCCGTCGCGGCTGACCAGGAGCTCTTCTGGGCCGTCCTCGGCGGCA
GCCCCGGCAACTTTGGCGTGCTGACTCACGTGACCATAAGGCCGCACCAC
GACGAGGACCACCCCAACGCGCACGGGATGAAGGTGAGCAGAAGTTGA
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