mRNA_2167 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Match: A0A835YWV7_9STRA (FAD-binding PCMH-type domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWV7_9STRA) HSP 1 Score: 434 bits (1117), Expect = 3.770e-154 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 1
Query: 1 GHSDYEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYTEFEYDAATGLLRTGISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKVSRS 645
GHSDYEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYTEFEYDAATGLLRTGISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKVSRS
Sbjct: 1 GHSDYEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYTEFEYDAATGLLRTGISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKVSRS 215
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Match: A0A0R3MB10_9BRAD (FAD-binding PCMH-type domain-containing protein n=2 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=A0A0R3MB10_9BRAD) HSP 1 Score: 234 bits (597), Expect = 1.540e-70 Identity = 118/204 (57.84%), Postives = 148/204 (72.55%), Query Frame = 1
Query: 28 YQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYTEFEYDAATGLLRTGISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKVS 639
YQYAT+S+ MSPAAI+ PQ+PNAD DVK AI +AA G+ +AVRTGGH Y G SST NIQLD+S AY+E+EYD TGLLR GIS+ L++F KL E GLF+ GQC +V +GGH QTGGYGQL+RAFGLF D +V+ I AD + + DS V AD++LF+AVLGG PGN+G++TH+TIRP D DH + K +
Sbjct: 11 YQYATTSNPA-ANMSPAAIICPQHPNADPDVKKAILYAAANGIGVAVRTGGHAYSGTSSTTSNNIQLDLSEAYSEWEYDTQTGLLRLGISYSLLEFNNKLREAGLFMPTGQCYNVHVGGHVQTGGYGQLARAFGLFSDQLVSFEIFLADGSKKTIAVDSPVQADRDLFFAVLGGGPGNYGIVTHITIRPGKDADHKYSRAYKYA 213
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Match: A0A350G0D2_9CHLR (FAD-binding PCMH-type domain-containing protein n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A350G0D2_9CHLR) HSP 1 Score: 234 bits (596), Expect = 2.780e-70 Identity = 121/211 (57.35%), Postives = 150/211 (71.09%), Query Frame = 1
Query: 1 GHSDYEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYTEFEYDAATGLLRTGISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMK 633
G DYE +RYQYATSS + MSPAAI+ PQ+PNAD DV AI++AA +AIAVRTGGH Y G SST NIQLD+S AY E++Y+ TGLL+ GISH L++F +L E GLF+ GQC V +GGHAQTGGYGQLSRAFGLF D IV+ I AD R + DS D++LF+AVLGG PGN+G++T +T+RP+ D DH + K
Sbjct: 14 GDKDYEFYRYQYATSSQPRE-KMSPAAIIRPQHPNADPDVLTAIRYAAANKLAIAVRTGGHAYSGTSSTTKKNIQLDLSEAYNEWDYNPETGLLQVGISHTLLEFNTRLKEAGLFMPTGQCYDVHVGGHAQTGGYGQLSRAFGLFSDQIVSFEIFLADGTKRVVAADSPDQFDKDLFFAVLGGGPGNYGIVTRITVRPYRDSDHRYSRAYK 223
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Match: A0A015J1B6_RHIIW (FAD-binding PCMH-type domain-containing protein n=6 Tax=Rhizophagus TaxID=1129544 RepID=A0A015J1B6_RHIIW) HSP 1 Score: 212 bits (540), Expect = 4.900e-62 Identity = 112/211 (53.08%), Postives = 148/211 (70.14%), Query Frame = 1
Query: 10 DYEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYTEFEYDAATGLLRT-GISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKVS 639
DY+ YQYA+SSH DG + PAAI+ D+DV AI++A++ +A+AVRTGGHQY G SST G NIQLD+S+ Y +F++D T GIS L +F AKL E+ FV HGQC +V +GGH QTGGYGQL+R+FGLF D+++ RIITAD +VR VA ++LF+AVLGGSPGNFGVLTH T+ D+D+PN+ G++ +
Sbjct: 33 DYDAQSYQYASSSHLEDGIIQPAAIIKAAD---DSDVIKAIKYASENKIAVAVRTGGHQYSGASSTSGKNIQLDLSQTYKDFDWDDENCTSVTLGISFPLGEFNAKLREKNRFVPHGQCQYVNLGGHIQTGGYGQLARSFGLFSDNVIKFRIITADGQVRW------VAQGEDLFFAVLGGSPGNFGVLTHATLHVFRDQDYPNSRGLRAA 234
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Match: A0A8H6VGR0_9PEZI (FAD-linked oxidoreductase n=1 Tax=Pseudocercospora fuligena TaxID=685502 RepID=A0A8H6VGR0_9PEZI) HSP 1 Score: 206 bits (524), Expect = 5.230e-60 Identity = 101/214 (47.20%), Postives = 141/214 (65.89%), Query Frame = 1
Query: 13 YEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYTE------FEYDAATGLLRTGISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKV 636
+E +RYQYATSSHG D M+P ++ P+ D+K A+++A ++G+A+A+RTGGHQY G SSTGG NIQLD+ R + + + T +SH + + L LFV HGQCSHV +GGH QTGGYGQL R+FGLFGDH+ ++ +I AD E+TR S D +LF+A+LGGSPGNFGV+TH+ + H D+++ A G++
Sbjct: 58 WENNRYQYATSSHGIDHDMNPQIVIQPRNKE---DIKTALKYAKEQGIAVAIRTGGHQYSGASSTGGKNIQLDLQRTFRSPDDLKVLPFKDGKAFVYTSVSHSISELNTFLGSNSLFVPHGQCSHVHVGGHVQTGGYGQLGRSFGLFGDHVRSLTLINADSLEIEVTRSS----DPDLFYALLGGSPGNFGVITHIVLEVHQDKNYSGAMGLRA 264
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Match: A0A397U028_9GLOM (FAD-binding PCMH-type domain-containing protein n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397U028_9GLOM) HSP 1 Score: 207 bits (527), Expect = 5.610e-60 Identity = 108/213 (50.70%), Postives = 149/213 (69.95%), Query Frame = 1
Query: 1 GHSDYEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYTEFEYDAATGLLRT-GISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKV 636
G +YE+ YQYA+SS+ +G + PA I+ + ++DV AI +A+D+ +A+A+RTGGHQY G SST G NIQLD+S+ Y +F +D T GIS L +F AKL E+ FV HGQC V +GGH QTGGYGQL+R+FGL DH+ RIITAD + R + R+ + D++LF+AVLGGSPGNFGVLTH+T++ D+D+PN+ G++
Sbjct: 38 GDDNYEKECYQYASSSYLEEGIIQPAYIIKAKN---ESDVIKAINYASDKKIAVAIRTGGHQYSGASSTNGNNIQLDLSQTYKDFTWDNEDCTSVTIGISFSLGEFNAKLREKNRFVPHGQCQSVNVGGHVQTGGYGQLARSFGLLADHVEKFRIITADGQARWVVRN--FSQDKDLFFAVLGGSPGNFGVLTHITLKVFRDQDYPNSRGLRA 245
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Match: A0A1Y2X9I8_9PEZI (FAD-binding PCMH-type domain-containing protein n=3 Tax=Daldinia TaxID=42360 RepID=A0A1Y2X9I8_9PEZI) HSP 1 Score: 205 bits (521), Expect = 6.200e-60 Identity = 106/214 (49.53%), Postives = 144/214 (67.29%), Query Frame = 1
Query: 13 YEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAY------TEFEYDAATGLLRTGISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKV 636
YEE +YQYATS++G + ++P IV P+ D+ LA+++A ++ +A+A++TGGHQY G SST NIQLD+ ++ T FE D RT +S L +F A +AE LFV HGQC+ V +GGH QTGGYGQL R+FGLFGDH++++ II +D +E+T+ A D +LFWA LGGSPGN GVLTH TIR H D+D+ + GMK
Sbjct: 19 YEEVKYQYATSTYGKERDLNPGLIVQPKTKE---DIVLALKYAKEKKIAVAIKTGGHQYSGASSTSAPNIQLDLEHSFRGPEDRTIFEKDGKA-YARTSVSWSLGEFNAWVAEHKLFVPHGQCTEVHVGGHVQTGGYGQLGRSFGLFGDHVLSLEIIDSDGNFKEITK----ATDPDLFWAFLGGSPGNLGVLTHFTIRMHRDQDYNGSRGMKA 224
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Match: A0A8H4AS40_GIGMA (FAD-binding domain-containing protein n=1 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H4AS40_GIGMA) HSP 1 Score: 206 bits (523), Expect = 1.160e-59 Identity = 110/226 (48.67%), Postives = 151/226 (66.81%), Query Frame = 1
Query: 1 GHSDYEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYT------------EFEYDAATGLLRT-GISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKVS 639
G +DYE+ YQYA+SS+ + + PA I+ P D DV AI++A+D +A+AVRTGGHQYCG SST G NIQLD+S+ Y +F ++ L T G+S+ L DF AKL ++ FV HGQC +V +GGH QTGGYG L R+FGL D++ RIITAD ++R + +++ D++LF+AVLGGSPGNFGV+THVT+R DEDH N+ G++ +
Sbjct: 18 GDADYEQQSYQYASSSYLEEDIVRPAVIIQPAD---DDDVIKAIKYASDNKIAVAVRTGGHQYCGASSTSGKNIQLDLSQTYNKDPIQFPTKDPKDFNWENEDCTLVTFGVSYSLGDFNAKLRDKNRFVPHGQCKYVNLGGHVQTGGYGMLGRSFGLLSDYVEKFRIITADGQIRWIEKNNN--EDKDLFFAVLGGSPGNFGVITHVTLRVFKDEDHRNSRGLRAA 238
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Match: A0A1D1YKS3_9ARAE (6-hydroxy-D-nicotine oxidase (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YKS3_9ARAE) HSP 1 Score: 206 bits (523), Expect = 1.290e-59 Identity = 108/211 (51.18%), Postives = 143/211 (67.77%), Query Frame = 1
Query: 10 DYEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAYTEFEY--DAATGLLRTGISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKV 636
DYE YQYA+SSH D + PA I+ D+DV AI++A D +A+A+RTGGHQY G SST G NIQLD+S Y +F++ D T L+R G+S L +F + + FV HGQC HV +GGH TGGYGQL R+FGLF DH+ IRIITAD + +E+ + + +LF+AVLGGSPGNFGV+TH+T++ H DED+PN+ G +
Sbjct: 16 DYEATSYQYASSSHLKDKIIEPAVIIAAVD---DSDVIKAIKYARDNNLAVAIRTGGHQYSGASSTNGDNIQLDLSYTYRDFDWQNDDCT-LVRLGVSFSLDEFNKSIGGKKRFVPHGQCQHVHVGGHLHTGGYGQLGRSFGLFSDHVRKIRIITADGKTQEIDHND----NPDLFYAVLGGSPGNFGVVTHITLQVHRDEDYPNSRGFRA 218
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Match: A0A094EVJ2_9PEZI (FAD-binding PCMH-type domain-containing protein (Fragment) n=1 Tax=Pseudogymnoascus sp. VKM F-4517 (FW-2822) TaxID=1420911 RepID=A0A094EVJ2_9PEZI) HSP 1 Score: 196 bits (499), Expect = 1.390e-59 Identity = 102/214 (47.66%), Postives = 141/214 (65.89%), Query Frame = 1
Query: 13 YEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRGVAIAVRTGGHQYCGVSSTGGANIQLDMSRAY------TEFEYDAATGLLRTGISHKLIDFRAKLAERGLFVAHGQCSHVRIGGHAQTGGYGQLSRAFGLFGDHIVAIRIITADQEVRELTRDSAVAADQELFWAVLGGSPGNFGVLTHVTIRPHHDEDHPNAHGMKV 636
Y+ ++YQYA+SS+ D M+P I+ P+ N D+ LA+++A + +A+A+RTGGHQY G SST +NIQLD+ + + T FE D T +RT +S L A L LFV HGQC VR+GGH QTGGYGQL R+FGLFGDH++++ ++ + +E+T+ A D ELF+A+LGGSPGNFGVLTH TI H D D+ + G+K
Sbjct: 19 YQNNKYQYASSSYEIDHNMNPGLIIQPENKN---DIVLALKYAKAQKIAVAIRTGGHQYSGASSTSASNIQLDLKKTFRQPDDQTHFEKDGRT-FVRTSVSWSLGALNAYLTRHKLFVPHGQCIDVRLGGHVQTGGYGQLGRSFGLFGDHVLSLEMVDHEGNFKEVTK----ATDPELFYAILGGSPGNFGVLTHFTIEVHRDSDYKGSRGLKA 224 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|158492 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_2167 ID=mRNA_2167|Name=jgi.p|Trimin1|158492|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=648bp|location=Sequence derived from alignment at Contig_6:1025148..1028772- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GGCCATTCTGACTACGAGGAGCACCGCTACCAGTACGCGACGTCATCGCAback to top protein sequence of jgi.p|Trimin1|158492 >Trimin1|158492|e_gw1.6.189.1 ID=Trimin1|158492|e_gw1.6.189.1|Name=jgi.p|Trimin1|158492|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=216bp GHSDYEEHRYQYATSSHGHDGAMSPAAIVYPQYPNADADVKLAIQWAADRback to top mRNA from alignment at Contig_6:1025148..1028772- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_2167 ID=mRNA_2167|Name=jgi.p|Trimin1|158492|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3625bp|location=Sequence derived from alignment at Contig_6:1025148..1028772- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_6:1025148..1028772- >mRNA_2167 ID=mRNA_2167|Name=jgi.p|Trimin1|158492|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=648bp|location=Sequence derived from alignment at Contig_6:1025148..1028772- (Tribonema minus UTEX_B_3156 )back to top |