mRNA_2141 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|138734 vs. uniprot
Match: A0A835YQ51_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ51_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 9.930e-18 Identity = 34/34 (100.00%), Postives = 34/34 (100.00%), Query Frame = 1 Query: 1 DCNKTFSSKGGMYKHVKAVHLKIKDVICTHGGCG 102 DCNKTFSSKGGMYKHVKAVHLKIKDVICTHGGCG Sbjct: 1 DCNKTFSSKGGMYKHVKAVHLKIKDVICTHGGCG 34
BLAST of jgi.p|Trimin1|138734 vs. uniprot
Match: A0A835ZA48_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA48_9STRA) HSP 1 Score: 355 bits (910), Expect = 2.280e-123 Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 1 Query: 1 CPAGAYCPAGSSAATPCDVXXXXXXXXXXXXXXXXXXXXXXXXTSATAMLTGGASWSRVGEAAGACFNGTLCVAADDADYGYTRAPDLLRDPCPVGHYCPAGTPAALPCPAGTLQPLVGMDGAEDCQDTPAGYYSVAVSDWGGLCEPGYYCPINSTGPRETPCPARFYRSDWGAASEADCSLCTSGGYCPGG 576 CPAGAYCPAGSSAATPCDVXXXXXXXXXXXXXXXXXXXXXXXXTSATAMLTGGASWSRVGEAAGACFNGTLCVAADDADYGYTRAPDLLRDPCPVGHYCPAGTPAALPCPAGTLQPLVGMDGAEDCQDTPAGYYSVAVSDWGGLCEPGYYCPINSTGPRETPCPARFYRSDWGAASEADCSLCTSGGYCPGG Sbjct: 1 CPAGAYCPAGSSAATPCDVXXXXXXXXXXXXXXXXXXXXXXXXTSATAMLTGGASWSRVGEAAGACFNGTLCVAADDADYGYTRAPDLLRDPCPVGHYCPAGTPAALPCPAGTLQPLVGMDGAEDCQDTPAGYYSVAVSDWGGLCEPGYYCPINSTGPRETPCPARFYRSDWGAASEADCSLCTSGGYCPGG 192
BLAST of jgi.p|Trimin1|138734 vs. uniprot
Match: A0A7S3JSV9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSV9_9STRA) HSP 1 Score: 169 bits (428), Expect = 3.810e-49 Identity = 77/147 (52.38%), Postives = 95/147 (64.63%), Query Frame = 1 Query: 130 TSATAMLTGGASWSRVGEAAGACFNGTLCVAADDADYGYTRAPDLLRDPCPVGHYCPAGTPAALPCPAGTLQPLVGMDGAEDCQDTPAGYYSVA-VSDWGGLCEPGYYCPINSTGPRETPCPARFYRSDWGAASEADCSLCTSGGYC 567 T+ M + G W+ + AG CFNGT C +A TRAPDLLRD CP G+YCP TP + CPAGT P+ G D +DC +TP G+Y++A S++ C PGYYCP+ STG RE PCP RFY D+G S DC+LCTSGGYC Sbjct: 8 TTTDEMYSLGGDWNSAEDVAGQCFNGTYCPSA------MTRAPDLLRDACPTGYYCPTATPLPIACPAGTYNPVTGADDIDDCLETPKGFYTIAGASNYTQQCSPGYYCPVGSTGSREVPCPERFYLPDYGGGSLLDCALCTSGGYC 148
BLAST of jgi.p|Trimin1|138734 vs. uniprot
Match: D8LR26_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR26_ECTSI) HSP 1 Score: 157 bits (396), Expect = 8.120e-41 Identity = 77/144 (53.47%), Postives = 90/144 (62.50%), Query Frame = 1 Query: 130 TSATAMLTGGASWSRVGEAAGACFNGTLCVAADDADYGYTRAPDLLRDPCPVGHYCPAGTPAALPCPAGTLQPLVGMDGAE-DCQDTPAGYYSVAVS-DWGGLCEPGYYCPINSTGPRETPCPARFYRSDWGAASEADCSLCTS 555 TSA MLTG SW ++G CFNGT C A G TRAPDL RD CP GHYCPAG + PCP+GT P G D E DC + GYY++ S + G C+PGYYCP STGP++ PCP RFYRS GA S+ DC+ C S Sbjct: 1539 TSAVDMLTGVGSWDLSSNSSGMCFNGTYCAA------GMTRAPDLARDACPAGHYCPAGVASPYPCPSGTYNPHTGRDDLEEDCLISLEGYYTIEASTNMTGSCDPGYYCPAGSTGPQQVPCPERFYRSSSGAGSQDDCAYCVS 1676
BLAST of jgi.p|Trimin1|138734 vs. uniprot
Match: A0A7S3JP84_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JP84_9STRA) HSP 1 Score: 149 bits (377), Expect = 2.690e-38 Identity = 73/148 (49.32%), Postives = 86/148 (58.11%), Query Frame = 1 Query: 130 TSATAMLTGGASWSRVGEAAGACFNGTLCVAADDADYGYTRAPDLLRDPCPVGHYCPAGTPAALPCPAGTLQPLVGMDGAEDCQDTPAGYYSVA-VSDWGGLCEPGYYCPINSTGPRETPCPARFYRSDWGAASEADCSLCTSGGYCP 570 T+ +AML G W+ + AG CFNGT C G TRAPDL RD CP G YCP + L CPAGT P G EDC +TPAGYY++A S+ GLC PGYYCP ST CPA Y +G ++C+LC SGGYCP Sbjct: 284 TNMSAMLNNGGYWTNSDDLAGRCFNGTFCPT------GMTRAPDLTRDACPSGSYCPIAIASPLNCPAGTYNPFTGFGRVEDCLETPAGYYTIAGSSNITGLCSPGYYCPAGSTTSMARSCPATTYNPYYGRMEVSECALCVSGGYCP 425
BLAST of jgi.p|Trimin1|138734 vs. uniprot
Match: F0YNW2_AURAN (TNFR-Cys domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNW2_AURAN) HSP 1 Score: 146 bits (369), Expect = 3.320e-37 Identity = 73/146 (50.00%), Postives = 85/146 (58.22%), Query Frame = 1 Query: 130 TSATAMLTGGASWSRVGEAAGACFNGTLCVAADDADYGYTRAPDLLRDPCPVGHYCPAGTPAALPCPAGTLQPLVGMDGAEDCQDTPAGYYSV-AVSDWGGL-CEPGYYCPINSTGPRETPCPARFYRSDWGAASEADCSLCTSGG 561 T+ MLT G W+ +AAG CFNGT C G RAPDL RD CP G+YCP T PCPAGT GMD EDC TP GYYS+ A S++ C PG++CP STGP + PCP RFY D+G + C LC SGG Sbjct: 1298 TATADMLTLGGDWAAADDAAGMCFNGTYCPE------GMARAPDLYRDACPAGYYCPTATAKPQPCPAGTFNRNTGMDAREDCVITPQGYYSISATSNFTDYKCAPGHWCPTGSTGPYQVPCPERFYNPDYGGGAITACGLCKSGG 1437
BLAST of jgi.p|Trimin1|138734 vs. uniprot
Match: A0A2T7NFW9_POMCA (Uncharacterized protein n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NFW9_POMCA) HSP 1 Score: 99.4 bits (246), Expect = 1.060e-20 Identity = 53/123 (43.09%), Postives = 63/123 (51.22%), Query Frame = 1 Query: 211 LCVAADDADYGYTRAPDLLRDPCPVGHYCPAGT--PAALPCPAGTLQPLVGMDGAEDC-QDTPAGY-YSVAVSDWGGLCEPGYYCPINSTGPRETPCPARFYRSDWGAASEADCSLCTSGGYC 567 +C A + G TR PDL+RD C +G+YCPAG P PCP GT G DC Q TP Y Y +S G C GYYCP+ + PCP FYR+ S DC+ C SG YC Sbjct: 1704 VCPAGLECPAGMTRQPDLIRDRCRIGYYCPAGNVQPLPQPCPGGTYNAETGRMRVSDCVQCTPGKYCYPSGLSQPAGDCPGGYYCPLGTAESNSFPCPIGFYRNGSAKESFEDCTECISGYYC 1826
BLAST of jgi.p|Trimin1|138734 vs. uniprot
Match: UPI000D730558 (uncharacterized protein LOC112553744 isoform X1 n=2 Tax=Pomacea canaliculata TaxID=400727 RepID=UPI000D730558) HSP 1 Score: 99.4 bits (246), Expect = 1.060e-20 Identity = 53/123 (43.09%), Postives = 63/123 (51.22%), Query Frame = 1 Query: 211 LCVAADDADYGYTRAPDLLRDPCPVGHYCPAGT--PAALPCPAGTLQPLVGMDGAEDC-QDTPAGY-YSVAVSDWGGLCEPGYYCPINSTGPRETPCPARFYRSDWGAASEADCSLCTSGGYC 567 +C A + G TR PDL+RD C +G+YCPAG P PCP GT G DC Q TP Y Y +S G C GYYCP+ + PCP FYR+ S DC+ C SG YC Sbjct: 1704 VCPAGLECPAGMTRQPDLIRDRCRIGYYCPAGNVQPLPQPCPGGTYNAETGRMRVSDCVQCTPGKYCYPSGLSQPAGDCPGGYYCPLGTAESNSFPCPIGFYRNGSAKESFEDCTECISGYYC 1826
BLAST of jgi.p|Trimin1|138734 vs. uniprot
Match: A0A8J9ZZB1_BRALA (CEP250 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9ZZB1_BRALA) HSP 1 Score: 86.3 bits (212), Expect = 3.700e-16 Identity = 45/128 (35.16%), Postives = 63/128 (49.22%), Query Frame = 1 Query: 196 CFNGTLCVAADDADYGYTRAPDLLRDPCPVGHYCPAGT--PAALPCPAGTLQPLVGMDGAEDCQDTPAGYYSV-AVSDWGGLCEPGYYCPINSTGPRETPCPARFYRSDWGAASEADCSLCTSGGYCP 570 C G C++ G +AP+ PC GHYCPAGT P PC AGT L ++ +++C GYY + ++ GLC+ G++CP + E PC Y ++ G DC C G YCP Sbjct: 2288 CPAGVACLSGTG---GVNKAPE----PCAAGHYCPAGTQFPMQFPCVAGTYSNLTNLEHSDECYVCTRGYYCLQGATEPSGLCDTGHWCPAGTATATENPCHGGSYSNNQGNTRWEDCEDCPEGAYCP 2408
BLAST of jgi.p|Trimin1|138734 vs. uniprot
Match: F2TZP5_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TZP5_SALR5) HSP 1 Score: 84.7 bits (208), Expect = 1.250e-15 Identity = 64/197 (32.49%), Postives = 83/197 (42.13%), Query Frame = 1 Query: 1 CPAGAYCPAGSSAATPCDVXXXXXXXXXXXXXXXXXXXXXXXXTSATAMLT---GGASWSRVGEAAGACFNGTLCVAADDADYGYTRAPDLLRDPCPVGHYCPAGTPAALPCPAGTLQPLVGMDGAEDCQDTPAGYYSVAV-----SDWGGLCEPGYYCPINSTGPRETPCPARFYRSDWGAASEADCSLCTSGGYC 567 CPAG YCPAGSS C T+ +A L G A S+ C G C ++ T L CP G+YCP GTP + CP+G+ Q DG DC+ PA Y A + + C GYYCP + +E PCPA + + G E+DC+ CT+G YC Sbjct: 2621 CPAGYYCPAGSSTPIACAAGTFSNVTMA---------------TNVSACLPCPIGHACVSQATTDPEPCAAGYYCN--EEGQTSTTPGSKL----CPPGYYCPEGTPDRVSCPSGSYQ---DEDGQADCKQCPASYVCNATVAPVTNPYLVACPAGYYCPAGTRFEQEYPCPAGTFSNALGLDEESDCTPCTAGMYC 2793
BLAST of jgi.p|Trimin1|138734 vs. uniprot
Match: A0A8B7Z5H0_ACAPL (zonadhesin-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Z5H0_ACAPL) HSP 1 Score: 83.2 bits (204), Expect = 4.240e-15 Identity = 55/157 (35.03%), Postives = 65/157 (41.40%), Query Frame = 1 Query: 196 CFNGTLCVAA------DDADYGYTRAPDLLRDPCPVGHYCPAGTPAALPCPAGTLQPLVGMDGAEDCQDTPAGYYSV--AVSDWGGLCEPGYYCPINSTGP----------------------RETPCPARFYRSDWGAASEADCSLCTSGGYCPGG 576 CF G CV D YGY CP GHYCPAGTPA +PCP GT P +G D DC+ GYY S+ G C GYYC N++ P R PC Y ++ GAA C +C +G C G Sbjct: 2826 CFAGFYCVLGASSGNPDGESYGYK---------CPEGHYCPAGTPAPVPCPVGTYNPDIGKDDQSDCRACDGGYYCQYDGQSNVTGQCYEGYYCAGNASIPNPEDGITGDICPVGHYCPEGIDRPLPCLNATYMNETGAAV---CLVCPAGNQCVSG 2970 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|138734 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
BLAST of jgi.p|Trimin1|138734 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_2141 ID=mRNA_2141|Name=jgi.p|Trimin1|138734|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=246bp|location=Sequence derived from alignment at Contig_6:850464..850709- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GACTGCAACAAGACGTTCAGCTCTAAGGGAGGCATGTACAAGCACGTCAAback to top protein sequence of jgi.p|Trimin1|138734 >Trimin1|138734|gw1.6.103.1 ID=Trimin1|138734|gw1.6.103.1|Name=jgi.p|Trimin1|138734|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=82bp DCNKTFSSKGGMYKHVKAVHLKIKDVICTHGGCGQMFSRHGHMRHHVNVVback to top mRNA from alignment at Contig_6:850464..850709- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_2141 ID=mRNA_2141|Name=jgi.p|Trimin1|138734|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=246bp|location=Sequence derived from alignment at Contig_6:850464..850709- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_6:850464..850709- >mRNA_2141 ID=mRNA_2141|Name=jgi.p|Trimin1|138734|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=246bp|location=Sequence derived from alignment at Contig_6:850464..850709- (Tribonema minus UTEX_B_3156 )back to top |