mRNA_1948 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|163560 vs. uniprot
Match: A0A836CFM8_9STRA (Kinase-like domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFM8_9STRA) HSP 1 Score: 676 bits (1744), Expect = 9.750e-246 Identity = 334/334 (100.00%), Postives = 334/334 (100.00%), Query Frame = 1 Query: 1 MYQRSVVREARHKSTRTSVLYRCESQGFVSVVPVVRSSKVTSVNGVIVGVNEHVISGRLGRGATAQVFECHSPQFGKAALKILEKTTGCESLHREIMALQALKNHSNIISLYTIIDDPTSDITCLVVEMAERGSLVGVMVSGLECQRVTSDIVSGLMHMHSKGFLHCDVKPANIVRTAEGVSKLADFGCCVRMAEGGSEAQHRYFMGTPAFMAPEMFKDGIVTPAVDVWSLASTLHYVVYGTLPFNSHLRGGSARRVREEGDIEDSIMYCEPSLGNNVRSRYLTNIESNWHSDDVTKFNHFCKTGLQKSPARRSTLGQWRQHEWLYYAVLKSVK 1002 MYQRSVVREARHKSTRTSVLYRCESQGFVSVVPVVRSSKVTSVNGVIVGVNEHVISGRLGRGATAQVFECHSPQFGKAALKILEKTTGCESLHREIMALQALKNHSNIISLYTIIDDPTSDITCLVVEMAERGSLVGVMVSGLECQRVTSDIVSGLMHMHSKGFLHCDVKPANIVRTAEGVSKLADFGCCVRMAEGGSEAQHRYFMGTPAFMAPEMFKDGIVTPAVDVWSLASTLHYVVYGTLPFNSHLRGGSARRVREEGDIEDSIMYCEPSLGNNVRSRYLTNIESNWHSDDVTKFNHFCKTGLQKSPARRSTLGQWRQHEWLYYAVLKSVK Sbjct: 1 MYQRSVVREARHKSTRTSVLYRCESQGFVSVVPVVRSSKVTSVNGVIVGVNEHVISGRLGRGATAQVFECHSPQFGKAALKILEKTTGCESLHREIMALQALKNHSNIISLYTIIDDPTSDITCLVVEMAERGSLVGVMVSGLECQRVTSDIVSGLMHMHSKGFLHCDVKPANIVRTAEGVSKLADFGCCVRMAEGGSEAQHRYFMGTPAFMAPEMFKDGIVTPAVDVWSLASTLHYVVYGTLPFNSHLRGGSARRVREEGDIEDSIMYCEPSLGNNVRSRYLTNIESNWHSDDVTKFNHFCKTGLQKSPARRSTLGQWRQHEWLYYAVLKSVK 334
BLAST of jgi.p|Trimin1|163560 vs. uniprot
Match: A0A835ZCT2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCT2_9STRA) HSP 1 Score: 430 bits (1105), Expect = 3.600e-148 Identity = 203/286 (70.98%), Postives = 240/286 (83.92%), Query Frame = 1 Query: 148 VNEHVISGRLGRGATAQVFECHSPQFGKAALKILEKTTGCESLHREIMALQALKNHSNIISLYTIIDDPTSDITCLVVEMAERGSLVGVMVSGLECQRVTSDIVSGLMHMHSKGFLHCDVKPANIVRTAEGVSKLADFGCCVRMAEGGSEAQHRYFMGTPAFMAPEMFKDGIVTPAVDVWSLASTLHYVVYGTLPFNSHLRGGSARR--VREEGDIEDSIMYCEPSLGNNVRSRYLTNIESNWHSDDVTKFNHFCKTGLQKSPARRSTLGQWRQHEWLYYAVLKSV 999 VN++V+SGRLG G TAQV+ECHSPQ+GKAALK++EK+TG ESLHRE+MALQALK+HSNIISL++IIDD SDIT LV EMAERGSLVGVM+SG+ECQR+ +IV GL HMHSKGF+H DVKPANI+R A G SKLADFGCCVRM EGG A++++FMGTPAFMAPE FKDG+VTPAVDVWS ASTLHYVVYGTLPF++ +RGG+ + ++ IEDSIM+ EP LG N R R++ N+E WHSDDVTKFNHFCK GL K+P R TLGQWRQHEWLY+ + V Sbjct: 3 VNDYVVSGRLGAGVTAQVYECHSPQYGKAALKVIEKSTGRESLHRELMALQALKDHSNIISLFSIIDDQKSDITWLVEEMAERGSLVGVMMSGMECQRMGYEIVCGLAHMHSKGFIHRDVKPANILRAANGTSKLADFGCCVRMEEGGDTARNKHFMGTPAFMAPETFKDGVVTPAVDVWSFASTLHYVVYGTLPFDTRVRGGTKGKNAAVDDAAIEDSIMFYEPYLGTNARPRHMKNMEKRWHSDDVTKFNHFCKMGLHKNPTHRCTLGQWRQHEWLYFYYIPLV 288
BLAST of jgi.p|Trimin1|163560 vs. uniprot
Match: A0A835Z3R1_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3R1_9STRA) HSP 1 Score: 275 bits (703), Expect = 2.210e-88 Identity = 138/279 (49.46%), Postives = 191/279 (68.46%), Query Frame = 1 Query: 148 VNEHVISGRLGRGATAQVFECHSPQFGKAALKILEKTTGCESLHREIMALQALKNHSNIISLYTIIDDPTSDITCLVVEMAERGSLVGV-MVSGLECQRVTSDIVSGLMHMHSKGFLHCDVKPANIVRTAEGVSKLADFGCCVRMAEGGSEAQHRYFMGTPAFMAPEMFKDGIVTPAVDVWSLASTLHYVVYGTLPFNSHLRGGSARRVREEGDIEDSIMYCEPSLGNNVRSRYLTNIESNWHSDDVTKFNHFCKTGLQKSPARRSTLGQWRQHEWLYY 981 VNE I+G +G G+TA+VFEC S GK A+K++ K+ ESLHREIMALQ LK H NI++L +I+DP D+ LV E+A +GSLVGV M + L+CQ V SD +S L +MHS+G++H DVKPANI+ ++G +KL DFGC +R+++ + A+ FMGTPAFMAPE+F GI+T A+DVWSL T+H+VVYG+LPF + E + S+MY P++G + R L + NW +DD+++F HFCK G +K P +R TL + QH+WL Y Sbjct: 7 VNEFSITGHMGTGSTARVFECSSDVHGKVAMKMVYKSKAKESLHREIMALQDLK-HKNIVNLLVVINDPRLDVAFLVEELATKGSLVGVVMKTSLQCQHVASDTMSALTYMHSRGYVHRDVKPANILIMSDGKAKLTDFGCAIRVSDCLTRAK---FMGTPAFMAPELFSTGIITTAIDVWSLVGTMHHVVYGSLPFGA-----------EGLVLSQSVMYSSPAMGTTMSPRCLKMMNENWTNDDISRFKHFCKEGFRKDPDKRITLEKLAQHDWLTY 270
BLAST of jgi.p|Trimin1|163560 vs. uniprot
Match: A0A836CE44_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE44_9STRA) HSP 1 Score: 133 bits (334), Expect = 1.700e-32 Identity = 98/282 (34.75%), Postives = 132/282 (46.81%), Query Frame = 1 Query: 172 RLGRGATAQVFECHSPQFGKAALKILEKTTGCESLHREIMALQALKNHSNIISLYTIIDDPTSDITCLVV-EMAERGSLVGVMVSGLECQRVTSDIVSGLMHMHSKGFLHCDVKPANIVRTAEGVSKLADFGCCVRMAEGGSEAQHRYFMGTPAFMAPEMFKD--GIVTPAVDVWSLASTLHYVVYGTLPFNSHLRGGSARRVREEGDIEDSIMY-------CEPSLGNNVRSRYLTNIESNWHSDDVTKFNHFCKTGLQKSPARRSTLGQWRQHEWLYYAV 987 R+G G T V+ ALK++ RE+ ALQAL+ H NI+ + L+V E+AE GSL GV++ E +++ S L +H +G+ H DVKP NI+R A+G KL DFGCC R E +E + R GTPAFM PE F+ T AVD W LA+T +V G PF+ RG + DSI+Y C+ GN+ DD +F GL K+P R ++ Q QH WL A Sbjct: 58 RIGGGGTGSVYAARDEYGADVALKVVANDAAAYG--REVRALQALQ-HRNIVQMVDTQGGQEGKGPYLIVMELAEWGSLAGVVLRSAEAAAYVAEVASALQFIHERGYAHGDVKPGNILRFADGTVKLCDFGCCER-PEAAAETRGRP-RGTPAFMPPEAFQGTGSGWTAAVDSWGLAATSFCLVRGRPPFSVAGRG-----------LFDSILYGRANLTACQGERGNDA--------------DDEADLANFVAWGLTKAPRGRPSMEQVLQHPWLTKAA 309
BLAST of jgi.p|Trimin1|163560 vs. uniprot
Match: A0A835YXT3_9STRA (Kinase-like domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXT3_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.260e-27 Identity = 84/271 (31.00%), Postives = 134/271 (49.45%), Query Frame = 1 Query: 172 RLGRGATAQVFECHSPQFGKAALKILEKTTGCESLHREIMALQALKNHSNIISLYTIIDDPTSDIT---CLVVEMAERGSLVGVMVSGLECQRVTSDIVSGLMHMHSKGFLHCDVKPANIVRTAEGVSKLADFGCCVRMAEGGSEAQHRYFMGTPAFMAPEMFKDGIVTPAVDVWSLASTLHYVVYGTLPFNSHLRGGSARRVREEGDIEDSIMYCEPSLGNNVRSRYLTNIESNWHSDDVTKFNHFCKTGLQKSPARRSTLGQWRQHEWL 975 RLG GATA V+E + + ALK++ + + RE+ L+ ++ H I+ L+ ++ + T +V+E+ GSL G+++ G E + D+ L ++H KG++H D+KPAN++R G K+ DFGCC ++A + R GTPAFM+PE ++ T A DVWSLA+T+ VV G PF ++ + IMY P + RS + E + + H GL K R ++ H W+ Sbjct: 22 RLGSGATATVYEACTEKNEVVALKVVMRDRN--TYMRELRVLKEMR-HDRIVKLFRSEENESYRKTGPFLIVMELEPWGSLSGLVLWGSEAAQCMRDVAIALQYIHRKGYIHGDIKPANLLRDGCGRIKVCDFGCCKKIATD-DDTVFRRPQGTPAFMSPEAYRGHGGTTACDVWSLAATIFCVVRGHPPFMGQ-------------NLVEKIMYGAPD---SHRSAPVVCCE------EESNLAHLVNWGLSKPARDRPSVDDVLHHPWM 266
BLAST of jgi.p|Trimin1|163560 vs. uniprot
Match: F0WLC1_9STRA (cGMP-dependent protein kinase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WLC1_9STRA) HSP 1 Score: 117 bits (292), Expect = 3.800e-25 Identity = 99/293 (33.79%), Postives = 145/293 (49.49%), Query Frame = 1 Query: 148 VNEHVISGRLGRGATAQVFECHSPQFGKA-ALKILEKT-----TGCE-----SLHREIMALQALKNHSNIISLYTIIDDPTSDITCLVVEMAERGSLVGVMVS-GLECQ---RVTSDIVSGLMHMHSKGFLHCDVKPANIVRTAEGVSKLADFGCCVRMAEGGSEAQHRYFMGTPAFMAPEMFKDGIVT--PAVDVWSLASTLHYVVYGTLPFNSHLRGGSARRVREEGDIEDSIMYCEPSLGNNVRSRYLTNIESNWHSDDVTKFNHFCKTGLQKSPARRSTLGQWRQHEWL 975 VNE+VI G LG+G +V C + Q K A+KIL K+ G E +L REI ++ L+ H N++ L +IDDP+S LV E + + + + GL Q R D++ GL ++H +H D+KP NI+ +AEGV+K+ADFG RM SE GTPAFMAPEMF P+VD+WSL +TL+ +V G P+ + + +V+++ C PS +L N+ + L K P R +L +HEW+ Sbjct: 587 VNEYVIQGDLGKGTYGRVKLCQNEQDNKLYAVKILHKSFVSRMAGKEDLLRDALRREIAIMKKLQ-HRNVVRLVEVIDDPSSAKIYLVQEYVKHNLMDQIAIMRGLTEQVARRYLRDLLLGLHYLHLHRVIHRDIKPGNILVSAEGVAKIADFGTA-RMIMNESETLSGA-KGTPAFMAPEMFDIDATYRGPSVDIWSLGATLYMMVIGHPPWLADNEIVLSEKVQKDE-------LCFPSEAETSVDPHLKNL---------------LQRMLTKDPKLRISLPGCFKHEWV 854
BLAST of jgi.p|Trimin1|163560 vs. uniprot
Match: UPI001CB8B52D (serine/threonine-protein kinase PEPKR2-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8B52D) HSP 1 Score: 110 bits (274), Expect = 2.240e-23 Identity = 81/251 (32.27%), Postives = 128/251 (51.00%), Query Frame = 1 Query: 175 LGRGATAQVFECHSPQFGKA-ALKILEKTTGCESLHREIMALQALKNHSNIISLYTIIDDPTSDITCLVVEMAERGSLVGVM-VSGLECQRVTSDIVSGLM----HMHSKGFLHCDVKPANIVRTAEGVSKLADFGCCVRMAEGGSEAQHRYFMGTPAFMAPEMFKDGIVTPAVDVWSLASTLHYVVYGTLPFNSHLRGGSARRVREEG-----DIEDSIMYCEPSLGNNVRSRYLT-NIESNWHSDDVTK 891 +G+G V +C S G+ A KIL+K G E +H+E+ +Q L H +++L + +D D LV+E+ G L+ M GL ++ ++++ LM + H G +H DVKP NI+ +A GV KLADFG R+A G S +G+PA++APE+ G + VD+WS LH ++ G LPF GGS + E D + + G ++ LT N+ + +D+V + Sbjct: 102 IGQGKFGSVVKCRSKVSGEEFACKILQK--GEEIVHKEVEIMQHLSGHPGVVTLKAVYED-VQDFH-LVMELCSGGRLLDQMRQDGLFSEQKAANLIKELMLVLKYCHEMGVIHRDVKPENILLSASGVIKLADFGLAARIANGQSV---HGVVGSPAYVAPEVLTGGY-SEKVDIWSAGVVLHALLVGFLPFG----GGSVNTIFEAVKNVSIDFQSGLWDSVSQSGRDLIGHMLTRNVSERYSADEVLR 340
BLAST of jgi.p|Trimin1|163560 vs. uniprot
Match: A0A523VB14_9CHLR (Non-specific serine/threonine protein kinase n=1 Tax=Anaerolineales bacterium TaxID=2073117 RepID=A0A523VB14_9CHLR) HSP 1 Score: 107 bits (268), Expect = 5.890e-23 Identity = 69/202 (34.16%), Postives = 104/202 (51.49%), Query Frame = 1 Query: 154 EHVISGRLGRGATAQVFECHSPQFGK-AALKILEKTTGCESLHREIMALQALK----NHSNIISLYTIIDDPTSDITCLVVEMAERGSLVGVMVSGLECQ---RVTSDIVSGLMHMHSKGFLHCDVKPANIVRTAEGVSKLADFGCCVRMAEGGSEAQHRYFMGTPAFMAPEMFKDGIVTPAVDVWSLASTLHYVVYGTLPF 735 E+ I + RGATA V++ + P+ + A+K+L E RE A +A +H NI+ +Y D D+ +VV+ + GSL +M + ++ + S L H HS+G +H DVKPANI+ E LADFG + E + Q MGTPA++APE V D++SLA+TL ++ G +PF Sbjct: 12 EYRIVEHIARGATANVYKAYQPKLNRNVAIKVLSPLYAKEEDFRERFAREAKAIAQLDHPNIVPVYDF--DRQGDLVYIVVQYVDTGSLADLMGERMPLDLAVKILDQVASALSHAHSRGIIHRDVKPANILLGQEDWVLLADFGLAKMLEESATITQPGSGMGTPAYIAPEQATGESVDARSDIYSLAATLFQMITGRVPF 211
BLAST of jgi.p|Trimin1|163560 vs. uniprot
Match: A0A197JSI3_9FUNG (Pkinase-domain-containing protein n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JSI3_9FUNG) HSP 1 Score: 110 bits (274), Expect = 6.120e-23 Identity = 77/252 (30.56%), Postives = 123/252 (48.81%), Query Frame = 1 Query: 250 EKTTGCESLHREIMALQALKNHSNIISLYTIIDDPTSDITCLVVEMAERGSLVGVMV--------SGLECQRVTSDIVSGLMHMHSKGFLHCDVKPANIVRTAEGVSKLADFGCCVRMAEGGSEAQHRYFMGTPAFMAPEMFKD-GIVT-PAVDVWSLASTLHYVVYGTLPFNSHLRGGSARRVREEGDIEDSIMYCEPSLGNNVRSRYLTNIESNWHSDDVTKFNHFCKTGLQKSPARRSTLGQWRQHEWL 975 E+ + + + EI L+ L NH NI+ LY ++D D +V E+ E G+L V V + EC+ V +V G+ ++H +H D+KP N++R+A+G K+ DFG + G + + G+PAFMAPE+ + G V+ D+WS+ TL + YG LPF S + + + E+ EP LG+ R+ T I T+ L+K P++R T+ + R WL Sbjct: 282 EEKSPLDLIRGEIAILKKL-NHVNIVKLYEVLDVAAEDSMYMVFELCELGALTEVSVGDKPGKIFTDSECRDVFQQMVLGIEYLHEHDIIHRDIKPDNLLRSADGTLKIVDFGVSEMFTKKGDDMIKKS-AGSPAFMAPELCRSHGEVSGKPTDLWSMGVTLFCIRYGRLPFKSGMSLELQKMINED----------EPDLGDEQDPRFRTTI---------TRL-------LEKDPSKRITIDELRNDPWL 505
BLAST of jgi.p|Trimin1|163560 vs. uniprot
Match: A0A232LZ32_9EURO (Protein kinase domain-containing protein n=1 Tax=Elaphomyces granulatus TaxID=519963 RepID=A0A232LZ32_9EURO) HSP 1 Score: 109 bits (273), Expect = 9.060e-23 Identity = 73/244 (29.92%), Postives = 122/244 (50.00%), Query Frame = 1 Query: 274 LHREIMALQALKNHSNIISLYTIIDDPTSDITCLVVEMAERGSLVGVMVSGL-------ECQRVTSDIVSGLMHMHSKGFLHCDVKPANIVRTAEGVSKLADFGCCVRMAEGGSEAQHRYFMGTPAFMAPEM--FKDGIVT-PAVDVWSLASTLHYVVYGTLPFNSHLRGGSARRVREEGDIEDSIMYCEPSLGNNVRSRYLTNIESNWHSDDVTKFNHFCKTGLQKSPARRSTLGQWRQHEWL 975 L +E +A+ NHSN++SL+ ++DDP D +V+EM ++G ++ V + +C+ D++ G+ ++H++G +H D+KP N + T E V K+ DFG A+ S+ G+PAF+ PE+ K G V+ A D+WS+ TL+ + YG +PF + ++ +SI E +LG +D H LQK PA+R T+ + R H W+ Sbjct: 163 LIKEEIAIMKKLNHSNLVSLFEVLDDPNEDSLYMVMEMCQKGVIMKVGLGDRADPYDDDQCRCWFRDLILGIEYLHAQGIVHRDIKPDNCLLTNEDVLKVVDFGVSQMFAKD-SDMYTAKSAGSPAFLPPELCVVKHGDVSGKAADIWSMGVTLYCLRYGRIPFEK----------QSIFELYESIKNDEVNLGEET-------------DEDFKDLLHRI---LQKDPAKRITMRELRDHPWV 379 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163560 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1948 ID=mRNA_1948|Name=jgi.p|Trimin1|163560|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1005bp|location=Sequence derived from alignment at Contig_26:597456..598460+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTACCAGAGAAGTGTAGTGCGCGAAGCACGTCACAAGTCGACCCGCACback to top protein sequence of jgi.p|Trimin1|163560 >Trimin1|163560|e_gw1.26.62.1 ID=Trimin1|163560|e_gw1.26.62.1|Name=jgi.p|Trimin1|163560|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=335bp MYQRSVVREARHKSTRTSVLYRCESQGFVSVVPVVRSSKVTSVNGVIVGVback to top mRNA from alignment at Contig_26:597456..598460+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1948 ID=mRNA_1948|Name=jgi.p|Trimin1|163560|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1005bp|location=Sequence derived from alignment at Contig_26:597456..598460+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_26:597456..598460+ >mRNA_1948 ID=mRNA_1948|Name=jgi.p|Trimin1|163560|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1005bp|location=Sequence derived from alignment at Contig_26:597456..598460+ (Tribonema minus UTEX_B_3156 )back to top |