mRNA_19146 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|138107
Unique NamemRNA_19146
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|138107 vs. uniprot
Match: A0A835Z7H1_9STRA (Serine/threonine-protein phosphatase n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7H1_9STRA)

HSP 1 Score: 510 bits (1314), Expect = 5.700e-180
Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 1
Query:    1 AALRSELTRLQEGTKRKHKVVKTTLGSKMSHHVVSHQGKISRRHMRGTASSMASAEILAGLFTPRETVPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFDRLPLAAVIDHDIFCIHG 744
            AALRSELTRLQEGTKRKHKVVKTTLGSKMSHHVVSHQGKISRRHMRGTASSMASAEILAGLFTPRETVPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFDRLPLAAVIDHDIFCIHG
Sbjct:   48 AALRSELTRLQEGTKRKHKVVKTTLGSKMSHHVVSHQGKISRRHMRGTASSMASAEILAGLFTPRETVPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFDRLPLAAVIDHDIFCIHG 295          
BLAST of jgi.p|Trimin1|138107 vs. uniprot
Match: A0A7S2WM62_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WM62_9STRA)

HSP 1 Score: 267 bits (682), Expect = 2.410e-82
Identity = 121/212 (57.08%), Postives = 158/212 (74.53%), Query Frame = 1
Query:  112 GKISRRHMRGTASSMASAEILAGL-FTPRETVPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFDRLPLAAVIDHDIFCIHG 744
            G + + HM G  +S+A+A+IL  L     + + E  +E   DP++ V Y     FALD++ LCE+ + +FE ESRCL+++SP  VFGD HGNL+DLHFF +N+W  G+ L PGR LFLGDYVDRG+ SLE V YL+A+K+L P KVF+LRGNHE RDVN WE++YG+ SF+ QCK RFG +RG  +WE +NQ+FDRLPLAAVIDH+IFCIHG
Sbjct:  156 GTVRKGHM-GRMASLATADILEALPIIETDILAETFVELYKDPTASVDYLASDSFALDILRLCEKAKHVFEAESRCLYLESPTFVFGDTHGNLEDLHFFSDNIWRLGMNLHPGRFLFLGDYVDRGLSSLEVVTYLIALKILFPHKVFMLRGNHETRDVNGWEEHYGDRSFIAQCKSRFGEDRGEEVWEELNQVFDRLPLAAVIDHEIFCIHG 366          
BLAST of jgi.p|Trimin1|138107 vs. uniprot
Match: A0A6V1NP81_HETAK (Serine/threonine-protein phosphatase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NP81_HETAK)

HSP 1 Score: 261 bits (666), Expect = 1.610e-81
Identity = 125/249 (50.20%), Postives = 170/249 (68.27%), Query Frame = 1
Query:    1 AALRSELTRLQEGTKRKHKVVKTTLGSKMSHHVVSHQGKISRRHMRGTASSMASAEILAGLFTPR-ETVPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFDRLPLAAVIDHDIFCIHG 744
            AAL+ E+ R+    + K  + +         HVV   G   +  M G  +S+A++ +L  + + + + +  R++     P  +V Y +  +FA DL+ L ++   + E E RC+ +QSPC+VFGDIHGNL+DL+FF +N+W  G+ LT G+ LFLGDYVDRGM  LECVAYLLA+K+  P KV+LLRGNHELRDVN WE++YGE SFL QC+DRFG E G  +WE VNQ+FDRLPLAAVIDHD+FC+HG
Sbjct:   22 AALQQEIHRISNEVQSKTGIARRDHPMTPVIHVVEEGGSTVQNRM-GRHASVATSNVLQNIPSKKNDELTPRMISMFKAPLDYVDYLKSARFARDLLRLAKRACPILENEPRCVFLQSPCYVFGDIHGNLEDLNFFSDNIWKLGMPLTAGKFLFLGDYVDRGMSGLECVAYLLALKIQNPEKVYLLRGNHELRDVNGWEEHYGERSFLWQCRDRFGEEMGIRVWEEVNQVFDRLPLAAVIDHDVFCVHG 269          
BLAST of jgi.p|Trimin1|138107 vs. uniprot
Match: A0A835YNA0_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNA0_9STRA)

HSP 1 Score: 254 bits (650), Expect = 1.140e-80
Identity = 114/154 (74.03%), Postives = 130/154 (84.42%), Query Frame = 1
Query:  286 MSLCEQGQELFEKESRCLHIQSPCHVFGDIH-GNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFDRLPLAAVIDHDIFCIHG 744
            M LC+Q   L E+E+RCL +QSPCHVFGDIH GNLDDLHFF + VW +G RL PGRLLFLGDYVDRG  SLECVAYLLA+K+ AP KVFLLRGNHELRDV+SW +YYG GSFL QC  RFG ERGA++WEVVN +FDR+PLAAV+D D+FCIHG
Sbjct:    1 MGLCDQASALLEQEARCLTLQSPCHVFGDIHAGNLDDLHFFADTVWPRGARLAPGRLLFLGDYVDRGAASLECVAYLLALKLTAPRKVFLLRGNHELRDVSSWVEYYGAGSFLAQCSARFGGERGAHVWEVVNTVFDRMPLAAVVDGDLFCIHG 154          
BLAST of jgi.p|Trimin1|138107 vs. uniprot
Match: A0A7R9UFR4_9STRA (Serine/threonine-protein phosphatase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFR4_9STRA)

HSP 1 Score: 258 bits (659), Expect = 2.700e-78
Identity = 116/203 (57.14%), Postives = 149/203 (73.40%), Query Frame = 1
Query:  139 GTASSMASAEILAGLFTPRET-VPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFDRLPLAAVIDHDIFCIHG 744
            G A+S+ +A ++A     R+  + ER++E    P  HV + R   FA D++ +CE    +FE+E R + +QSP +VFGDIHGN++DLHFF +N+W  G+ LT GR LFLGDYVDRG+  LECV YLLA+KVL P K++LLRGNHELRDVN WE +Y E SFL QCKDRFG  +G  +WE VN++FDRLPLAAVID DIFC+HG
Sbjct:   91 GRAASITTAAVIADTPISRDDPLAERMIEIFSKPLDHVEHLRSVDFADDILRICELVNPIFEREQRVISLQSPVYVFGDIHGNIEDLHFFADNIWKLGMNLTAGRFLFLGDYVDRGLSGLECVGYLLALKVLYPCKIYLLRGNHELRDVNGWETHYQERSFLRQCKDRFGVAKGIEVWEAVNKVFDRLPLAAVIDRDIFCVHG 293          
BLAST of jgi.p|Trimin1|138107 vs. uniprot
Match: D8LDZ7_ECTSI (Serine/threonine-protein phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDZ7_ECTSI)

HSP 1 Score: 253 bits (647), Expect = 3.380e-78
Identity = 117/219 (53.42%), Postives = 151/219 (68.95%), Query Frame = 1
Query:   94 HVVSHQGKISRRHMRGTASSMASAEILAGLFTPR--ETVPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFDRLPLAAVIDHDIFCIHG 744
            H+V  QG        G  +SMA+A  L+ L   R  + + +R++     P  H  Y    +FA D++ LC +   +FE E RCL IQSP +VFGDIHGNL+DL+FF +N+W  G+ LT G+ LFLGDYVDRGM  LEC+AYL A+K+  P K+F+LRGNHELRDVN W ++YGE SFL QC+DRFG + G  +WE  N +FDRLPLA+VIDHDIFC+HG
Sbjct:   86 HLVDEQGSGRPGGHMGRTASMATATALSSLQPGRKHDEMAQRVIRMFKTPKDHATYLTSVKFARDMLRLCARAGPIFENEPRCLFIQSPVYVFGDIHGNLEDLNFFSDNIWKLGMNLTAGKFLFLGDYVDRGMSGLECLAYLFALKIENPDKIFMLRGNHELRDVNGWVEHYGERSFLWQCQDRFGDDLGEEVWEGCNAVFDRLPLASVIDHDIFCVHG 304          
BLAST of jgi.p|Trimin1|138107 vs. uniprot
Match: D8LDZ8_ECTSI (Serine/threonine-protein phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ8_ECTSI)

HSP 1 Score: 251 bits (640), Expect = 2.000e-76
Identity = 123/250 (49.20%), Postives = 164/250 (65.60%), Query Frame = 1
Query:    1 AALRSELTRLQEGTKRKHKVVKTTLGSKMSHHVVSHQGKISRRHMRGTASSMASAEILAGLFTPR--ETVPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFDRLPLAAVIDHDIFCIHG 744
            +AL  E+ RL    +++ KVVK     +   H+V  +G   R    G  +S+A+A  L GL   R  +   +++L    +P  H  Y    +FA DLM LC+    L+E E RC+ +QSP +VFGDIHGNL+DLHFF +N+W  G+ LT G+ LFLGDYVDRG+  LEC+AYL ++K+  P K+F+LRGNHELRDVN W +YY E SFL QC++RFG   G  +WE  N +FDR+PLAAVID DIFC+HG
Sbjct:   40 SALEYEVRRLTIELQKQTKVVKREHPLEPLIHLVDDKGVGGRGSHMGRTASVATATALRGLGPSRKGDETAQKMLAMFTNPKEHADYLTSPRFAKDLMRLCKGVSHLYEAEPRCVFLQSPVYVFGDIHGNLEDLHFFADNIWKLGMNLTAGKFLFLGDYVDRGLLGLECLAYLFSLKLENPDKLFMLRGNHELRDVNGWVEYYREKSFLWQCQNRFGDSLGEDVWEACNAVFDRMPLAAVIDRDIFCVHG 289          
BLAST of jgi.p|Trimin1|138107 vs. uniprot
Match: A0A7S4IG93_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IG93_9STRA)

HSP 1 Score: 251 bits (641), Expect = 1.130e-75
Identity = 118/212 (55.66%), Postives = 151/212 (71.23%), Query Frame = 1
Query:  127 RHMRGTASSMASAEILAGLFTPRET------VPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFDRLPLAAVIDHDIFCIHG 744
            R   G  +S+A+A IL  L   +E+      + ER+ +   DP+SH+ Y   +QFA DL+ +  + + +FE E R   +QSP +VFGDIHGNL+DLHFF +NVW  G+ LT G  +FLGD+VDRGM  LECVAYL AMK+L P KVFLLRGNHE RDVN WE++YGE SF+ QC++RFG + G  +WE  NQ+FDRLPLAAVID DIFC+HG
Sbjct:  108 RERMGRNASIATAAILNALPDDQESRSSTHALAERITQMFKDPASHMDYMNSEQFARDLLKINAKVKPIFESEPRVAFLQSPAYVFGDIHGNLEDLHFFSDNVWRLGMALTAGNFVFLGDFVDRGMQCLECVAYLFAMKLLLPHKVFLLRGNHETRDVNGWEEHYGERSFIYQCRERFGDDLGFRVWEQTNQVFDRLPLAAVIDQDIFCVHG 319          
BLAST of jgi.p|Trimin1|138107 vs. uniprot
Match: A0A7R9VN74_9STRA (Serine/threonine-protein phosphatase (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VN74_9STRA)

HSP 1 Score: 242 bits (618), Expect = 1.390e-75
Identity = 125/270 (46.30%), Postives = 168/270 (62.22%), Query Frame = 1
Query:    1 AALRSELTRLQEGTKRKHKVVKTTLGSKMSHHVVSHQGKI-------------SRRHMR---GTASSMASAEILAGL------FTPRETVPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFDRLPLAAVIDHDIFCIHG 744
            AAL  E+T L        K  + T  +K  HH ++  G +               +H+R   G  +S+A+A +L  L       +    + +R+ +   DP+SH+ Y   +QFA DL+ +  + + +FE E R   +QSP +VFGDIHGN++DLHFF +NVW  G+ LT G  +FLGD+VDRGM  LE VAY  AMK+L P KVFLLRGNHE RDVN WE++YGE SF+ QC++RFG + G  +WE  NQ+FDRLPLAAVID DIFC+HG
Sbjct:   23 AALEKEVTLLSNKLSTLSKSAQQTGHAKRRHHPLTPYGNLVTESESNDGAKRRQLKHLRERMGRNASIATAAVLNALPDDETNRSSTHALAQRVADMFKDPASHMDYLNSEQFARDLLKINSKVKPIFEAEPRVAFLQSPAYVFGDIHGNIEDLHFFSDNVWRLGMALTAGNFVFLGDFVDRGMQCLEVVAYPFAMKLLLPHKVFLLRGNHETRDVNGWEEHYGERSFIYQCRERFGDDLGFRVWEQTNQVFDRLPLAAVIDQDIFCVHG 292          
BLAST of jgi.p|Trimin1|138107 vs. uniprot
Match: W7UBM2_9STRA (Serine/threonine-protein phosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UBM2_9STRA)

HSP 1 Score: 248 bits (633), Expect = 1.630e-75
Identity = 123/251 (49.00%), Postives = 166/251 (66.14%), Query Frame = 1
Query:    4 ALRSELT--RLQEGTK--RKHKVVKTTLGSKMSHHVVSHQGKISRRHMRGTASSMASAEILAGLFTPRETVPERLLERLDDPSSHVAYFRGKQFALDLMSLCEQGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGRLLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDYYGEGSFLTQCKDRFGAERGAYLWEVVNQLFDRLPLAAVIDHDIFCIHG 744
            +LR  L+  R QEG +  R  KVV  +       + V   G +SR  +   AS   +  + A      + +  ++++    P   + Y    +FA DL+ LCE+ + +FE E RCL ++SP +VFGDIHGNL+DL+FF +++W  G +LT GR LFLGDYVDRGM  LECVAYL A+K+++P K+F+LRGNHE RDVN WED+YG+ SFL QC+ RFG E G  +WE VNQ+FDRLPLA VID+DIFC+HG
Sbjct:   60 SLRDSLSQMRTQEGIRSPRNRKVVALS-------YQVEADGVLSRARVARQASVATAQALSAFPVESTDELASKMIDVFRKPLDKIDYLHSSRFAHDLIQLCERVKPIFEAEDRCLFLESPSYVFGDIHGNLEDLNFFADHLWRLGTQLTAGRFLFLGDYVDRGMNGLECVAYLFALKIISPTKLFMLRGNHETRDVNGWEDHYGDRSFLRQCRARFGRELGEQVWESVNQVFDRLPLAGVIDNDIFCVHG 303          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|138107 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z7H1_9STRA5.700e-180100.00Serine/threonine-protein phosphatase n=3 Tax=Tribo... [more]
A0A7S2WM62_9STRA2.410e-8257.08Serine/threonine-protein phosphatase n=1 Tax=Rhizo... [more]
A0A6V1NP81_HETAK1.610e-8150.20Serine/threonine-protein phosphatase n=1 Tax=Heter... [more]
A0A835YNA0_9STRA1.140e-8074.03Serine/threonine-protein phosphatase n=1 Tax=Tribo... [more]
A0A7R9UFR4_9STRA2.700e-7857.14Serine/threonine-protein phosphatase n=1 Tax=Pingu... [more]
D8LDZ7_ECTSI3.380e-7853.42Serine/threonine-protein phosphatase n=2 Tax=Ectoc... [more]
D8LDZ8_ECTSI2.000e-7649.20Serine/threonine-protein phosphatase n=1 Tax=Ectoc... [more]
A0A7S4IG93_9STRA1.130e-7555.66Serine/threonine-protein phosphatase n=2 Tax=Odont... [more]
A0A7R9VN74_9STRA1.390e-7546.30Serine/threonine-protein phosphatase (Fragment) n=... [more]
W7UBM2_9STRA1.630e-7549.00Serine/threonine-protein phosphatase n=2 Tax=Monod... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_484contigContig_484:13501..14244 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|138107|gw1.484.5.1
BRITEko00000,ko01000
KEGG koko:K01090
EC3.1.3.16
Descriptionphosphoprotein phosphatase activity
COG categoryT
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0639@1|root,KOG0374@2759|Eukaryota
Evalue5.54e-79
Seed ortholog2880.D8LDZ7
Hectar predicted targeting categoryother localisation
TranscriptId138429
TrackFilteredModels1
ProteinId138107
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|138107gene_19146Tribonema minus UTEX_B_3156 geneContig_484 13501..14244 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_19146_1exon_19146_1Tribonema minus UTEX_B_3156 exonContig_484 13501..14244 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_19146CDS_19146Tribonema minus UTEX_B_3156 CDSContig_484 13501..14244 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|138107Trimin1|138107|gw1.484.5.1Tribonema minus UTEX_B_3156 polypeptideContig_484 13501..14244 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_19146 ID=mRNA_19146|Name=jgi.p|Trimin1|138107|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=744bp|location=Sequence derived from alignment at Contig_484:13501..14244+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCGGCGCTGCGCAGCGAGCTAACTCGCCTGCAGGAGGGCACCAAGCGCAA
GCACAAGGTGGTTAAGACCACACTGGGCTCGAAGATGTCCCACCACGTCG
TAAGCCATCAGGGCAAAATCAGCCGTCGACACATGCGAGGGACGGCGAGC
AGCATGGCGTCCGCGGAGATACTGGCGGGCCTGTTCACTCCCCGAGAAAC
AGTACCCGAGAGGCTGCTGGAGCGGCTAGATGACCCCTCCTCTCATGTGG
CGTACTTCAGGGGCAAGCAATTTGCCCTCGACCTGATGTCTCTATGCGAG
CAAGGCCAGGAGCTCTTCGAGAAGGAGTCGCGGTGCCTGCACATCCAGTC
CCCCTGTCACGTCTTCGGCGACATCCACGGCAATCTCGACGACCTCCACT
TCTTCGGGGAGAACGTCTGGTCCAAGGGCATACGCCTCACCCCAGGGCGC
CTCCTCTTCCTAGGTGACTATGTCGACAGAGGCATGTTCTCACTGGAGTG
CGTGGCGTACCTGCTCGCCATGAAAGTGCTGGCGCCGGCAAAGGTGTTTC
TGCTGCGCGGTAATCACGAGCTCAGGGACGTCAACTCGTGGGAGGACTAT
TACGGGGAGGGCTCGTTCCTCACGCAATGCAAGGACCGATTCGGAGCGGA
GAGGGGAGCCTATTTGTGGGAGGTGGTGAACCAGCTTTTTGACCGCCTGC
CGCTTGCGGCGGTGATCGATCACGACATCTTCTGCATCCACGGT
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protein sequence of jgi.p|Trimin1|138107

>Trimin1|138107|gw1.484.5.1 ID=Trimin1|138107|gw1.484.5.1|Name=jgi.p|Trimin1|138107|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=248bp
AALRSELTRLQEGTKRKHKVVKTTLGSKMSHHVVSHQGKISRRHMRGTAS
SMASAEILAGLFTPRETVPERLLERLDDPSSHVAYFRGKQFALDLMSLCE
QGQELFEKESRCLHIQSPCHVFGDIHGNLDDLHFFGENVWSKGIRLTPGR
LLFLGDYVDRGMFSLECVAYLLAMKVLAPAKVFLLRGNHELRDVNSWEDY
YGEGSFLTQCKDRFGAERGAYLWEVVNQLFDRLPLAAVIDHDIFCIHG
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mRNA from alignment at Contig_484:13501..14244+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_19146 ID=mRNA_19146|Name=jgi.p|Trimin1|138107|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=744bp|location=Sequence derived from alignment at Contig_484:13501..14244+ (Tribonema minus UTEX_B_3156 )
GCGGCGCTGCGCAGCGAGCTAACTCGCCTGCAGGAGGGCACCAAGCGCAA GCACAAGGTGGTTAAGACCACACTGGGCTCGAAGATGTCCCACCACGTCG TAAGCCATCAGGGCAAAATCAGCCGTCGACACATGCGAGGGACGGCGAGC AGCATGGCGTCCGCGGAGATACTGGCGGGCCTGTTCACTCCCCGAGAAAC AGTACCCGAGAGGCTGCTGGAGCGGCTAGATGACCCCTCCTCTCATGTGG CGTACTTCAGGGGCAAGCAATTTGCCCTCGACCTGATGTCTCTATGCGAG CAAGGCCAGGAGCTCTTCGAGAAGGAGTCGCGGTGCCTGCACATCCAGTC CCCCTGTCACGTCTTCGGCGACATCCACGGCAATCTCGACGACCTCCACT TCTTCGGGGAGAACGTCTGGTCCAAGGGCATACGCCTCACCCCAGGGCGC CTCCTCTTCCTAGGTGACTATGTCGACAGAGGCATGTTCTCACTGGAGTG CGTGGCGTACCTGCTCGCCATGAAAGTGCTGGCGCCGGCAAAGGTGTTTC TGCTGCGCGGTAATCACGAGCTCAGGGACGTCAACTCGTGGGAGGACTAT TACGGGGAGGGCTCGTTCCTCACGCAATGCAAGGACCGATTCGGAGCGGA GAGGGGAGCCTATTTGTGGGAGGTGGTGAACCAGCTTTTTGACCGCCTGC CGCTTGCGGCGGTGATCGATCACGACATCTTCTGCATCCACGGT
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Coding sequence (CDS) from alignment at Contig_484:13501..14244+

>mRNA_19146 ID=mRNA_19146|Name=jgi.p|Trimin1|138107|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=744bp|location=Sequence derived from alignment at Contig_484:13501..14244+ (Tribonema minus UTEX_B_3156 )
GCGGCGCTGCGCAGCGAGCTAACTCGCCTGCAGGAGGGCACCAAGCGCAA
GCACAAGGTGGTTAAGACCACACTGGGCTCGAAGATGTCCCACCACGTCG
TAAGCCATCAGGGCAAAATCAGCCGTCGACACATGCGAGGGACGGCGAGC
AGCATGGCGTCCGCGGAGATACTGGCGGGCCTGTTCACTCCCCGAGAAAC
AGTACCCGAGAGGCTGCTGGAGCGGCTAGATGACCCCTCCTCTCATGTGG
CGTACTTCAGGGGCAAGCAATTTGCCCTCGACCTGATGTCTCTATGCGAG
CAAGGCCAGGAGCTCTTCGAGAAGGAGTCGCGGTGCCTGCACATCCAGTC
CCCCTGTCACGTCTTCGGCGACATCCACGGCAATCTCGACGACCTCCACT
TCTTCGGGGAGAACGTCTGGTCCAAGGGCATACGCCTCACCCCAGGGCGC
CTCCTCTTCCTAGGTGACTATGTCGACAGAGGCATGTTCTCACTGGAGTG
CGTGGCGTACCTGCTCGCCATGAAAGTGCTGGCGCCGGCAAAGGTGTTTC
TGCTGCGCGGTAATCACGAGCTCAGGGACGTCAACTCGTGGGAGGACTAT
TACGGGGAGGGCTCGTTCCTCACGCAATGCAAGGACCGATTCGGAGCGGA
GAGGGGAGCCTATTTGTGGGAGGTGGTGAACCAGCTTTTTGACCGCCTGC
CGCTTGCGGCGGTGATCGATCACGACATCTTCTGCATCCACGGT
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