mRNA_19103 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|154048 vs. uniprot
Match: A0A835YHZ7_9STRA (Kinase-like domain-containing protein (Fragment) n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHZ7_9STRA) HSP 1 Score: 405 bits (1040), Expect = 2.170e-142 Identity = 196/196 (100.00%), Postives = 196/196 (100.00%), Query Frame = 1
Query: 1 NELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 588
NELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL
Sbjct: 44 NELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 239
BLAST of jgi.p|Trimin1|154048 vs. uniprot
Match: A0A835YJH2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJH2_9STRA) HSP 1 Score: 335 bits (859), Expect = 1.240e-113 Identity = 167/196 (85.20%), Postives = 173/196 (88.27%), Query Frame = 1
Query: 1 NELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 588
NELFILQEWVPGGS+ ALLSSFG LNTKVVR YARQ LHGLAYLHAN I HRDLKCANLLVDAGGNVKIADFGTSAVVSQCRG+HGQ GTPIYMAPEL+FQ G GLPVDIWAFGAAVLEMATA PWRI GPEGMPSIDYLRCLVA++ APALPLDLDA LRS+L QCFCWRSGDRPTCSALLAHDFL
Sbjct: 130 NELFILQEWVPGGSLLALLSSFGRLNTKVVRHYARQVLHGLAYLHANTIAHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGNHGQ-----LIGTPIYMAPELLFQ--GKHGLPVDIWAFGAAVLEMATALAPWRIQGPEGMPSIDYLRCLVAKEHAPALPLDLDAALRSMLMQCFCWRSGDRPTCSALLAHDFL 318
BLAST of jgi.p|Trimin1|154048 vs. uniprot
Match: A0A835YLS7_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS7_9STRA) HSP 1 Score: 167 bits (424), Expect = 2.140e-48 Identity = 90/196 (45.92%), Postives = 118/196 (60.20%), Query Frame = 1
Query: 1 NELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 588
++L I QEWVPGGSVS+LL FG + + R Y RQAL GLAYLH++ +VHRD+ +N+LVD G VK+ADFG S +S G L GTP +MAPE++ + G+PVD+W+FG AVL+M + +PPW G P L R + P LP DL A LR+ L +CF W +RPT + L FL
Sbjct: 78 DQLCIFQEWVPGGSVSSLLQRFGPFSEDMTRGYTRQALQGLAYLHSHHVVHRDINGSNILVDDHGVVKLADFGASLQLSDAAGSRADGALKGTP---YFMAPEVLQR--SAHGMPVDVWSFGGAVLQMVSGEPPWFSYG-VSTPYALLQALLERRGQTPPLPADLSAGLRAFLERCFRWDPAERPTAAELALDPFL 267
BLAST of jgi.p|Trimin1|154048 vs. uniprot
Match: A0A835YKW2_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKW2_9STRA) HSP 1 Score: 169 bits (429), Expect = 7.070e-48 Identity = 93/191 (48.69%), Postives = 120/191 (62.83%), Query Frame = 1
Query: 1 NELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALL 573
++++I Q+W+PGGS+SALL+ FG L+ V R YARQAL GLAYLHAN IVHRDLK NLL+D G +KIADFGTSA V G L GTP +MAPE++ L + GLPVDIW F VL+M T + PW +P++ + A +R P LP D+ +R++L CF W +RPT LL
Sbjct: 83 DKVYIFQQWIPGGSISALLARFGPLSEHVTRLYARQALRGLAYLHANGIVHRDLKGDNLLIDGEGTIKIADFGTSARVPD--GAAAAEML----GTPYFMAPEML--LRCDHGLPVDIWGFACTVLQMLTNRRPWHSCRVTSLPALLSVM-QAALQRMPPLPPDMSPVMRAVLVNCFRWDPAERPTSRQLL 264
BLAST of jgi.p|Trimin1|154048 vs. uniprot
Match: D8LMN1_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMN1_ECTSI) HSP 1 Score: 174 bits (440), Expect = 9.590e-47 Identity = 89/195 (45.64%), Postives = 118/195 (60.51%), Query Frame = 1
Query: 4 ELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 588
+L I QEWVP GS+ +LL FG L+ + R+Y RQ L GL YLHAN ++HRD+K N+LVD GNVK+ADFG + V+ D+G M GTP++MAPE++ L+ G VD+W+ G AVLEM T +PPW T + I++ P LP DL LR L CF W +G RPT L+AH++L
Sbjct: 376 KLCIFQEWVPAGSLHSLLGQFGALSDAMTRKYTRQVLEGLVYLHANRVIHRDVKSKNILVDDRGNVKLADFGCALVLKD---DNGDGVEMSMKGTPLFMAPEML--LKRKCGKRVDVWSLGCAVLEMVTTRPPWADTFKHPVEIIEHFS---ENPGPPPLPEDLSPALREFLLSCFTWEAGRRPTSHQLVAHEYL 562
BLAST of jgi.p|Trimin1|154048 vs. uniprot
Match: A0A835YJU3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJU3_9STRA) HSP 1 Score: 160 bits (406), Expect = 8.040e-46 Identity = 89/195 (45.64%), Postives = 121/195 (62.05%), Query Frame = 1
Query: 7 LFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPW--RITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDF 585
++I+QEWVPGGS++++LS+FG V + YARQ LHGL YLH+ VHRDLK N+LV AGG VKIADFGTS + + D G + GT +MAPE++ + QG+ VD+WAF VL+M T PW + + +P + LR + A R P LP DL+ T+R+ LT CF W +RPT L+ H +
Sbjct: 75 VYIVQEWVPGGSITSILSNFGAFTQPVTQCYARQILHGLVYLHSCGTVHRDLKGDNVLVSAGGIVKIADFGTSEQLYDLQDDRGHLQ-----GTLHFMAPEVLQRQP--QGMAVDVWAFACLVLQMHTGNMPWASELGARKRLPRL--LRLMQAH-RMPPLPNDLNPTMRAALTACFSWNPAERPTAKHLVHHGY 259
BLAST of jgi.p|Trimin1|154048 vs. uniprot
Match: A0A835YLD7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLD7_9STRA) HSP 1 Score: 155 bits (391), Expect = 1.470e-42 Identity = 89/196 (45.41%), Postives = 120/196 (61.22%), Query Frame = 1
Query: 4 ELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARK-RAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 588
+L I QEWVPGGSVS+LL FG + + RRY RQAL GL YLH + +VHRD+K +N+LVD G VK+ADFG S VS D G L GTP +MAPE++ + G VDIW+FG A+L+M T +PPW G ++ L+ ++ RK + P LP +L +L ++L +CF W RP+ + L FL
Sbjct: 163 QLCIFQEWVPGGSVSSLLRRFGPFSEDMTRRYTRQALRGLTYLHQHQVVHRDIKGSNILVDDRGTVKLADFGASICVSD-PADAGGGALKGTP---YFMAPEVLQRKP--HGPLVDIWSFGGAILQMVTGEPPWYSAGVSTPYAL--LQTMLERKGQPPPLPANLSPSLAAMLRRCFSWDPALRPSAAQLELDAFL 350
BLAST of jgi.p|Trimin1|154048 vs. uniprot
Match: A0A835Z4I6_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4I6_9STRA) HSP 1 Score: 153 bits (386), Expect = 2.590e-41 Identity = 83/200 (41.50%), Postives = 113/200 (56.50%), Query Frame = 1
Query: 4 ELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTP-----GTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 588
+L I QEWVPG S+S+ LS++G +T + RRY RQ L GLAYLH + ++H D+KC NLL+D GG VK+ADFGT+A +S+ GTP +MAPE++ DIW+ G AVL+M T + PW+ G + R + A + PALP + A LR + +CF W DRP +AL FL
Sbjct: 211 KLLIFQEWVPGNSLSSRLSTYGKFSTAMTRRYTRQILCGLAYLHGHGVMHMDIKCENLLLDKGGVVKLADFGTAAKISETGAQXXXXXXXXXXXXXRLGTPYFMAPEVLIARRYTPK--ADIWSVGGAVLQMTTLRAPWQGMG--FRTPVQLQRHMAAFRLPPALPRGVPAPLRDFMRRCFAWAPEDRPAAAALALDPFL 406
BLAST of jgi.p|Trimin1|154048 vs. uniprot
Match: A0A835YMG7_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG7_9STRA) HSP 1 Score: 147 bits (370), Expect = 5.440e-41 Identity = 76/138 (55.07%), Postives = 91/138 (65.94%), Query Frame = 1
Query: 4 ELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTPGTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITG 417
EL I QEWVPGGSV+ALLS FG + + R YARQAL G+AYLH I HRD+K +N+LV A G +K+ADFGTS VV G S GTP +MAPE++ + GLPVDIW FG A+L+MAT PPW G
Sbjct: 55 ELRIFQEWVPGGSVAALLSRFGPFSEPMTRSYARQALAGIAYLHGRHIAHRDIKGSNMLVGANGVLKLADFGTSVVVPADNTARGISASGSVQGTPYFMAPEVLQR--SAHGLPVDIWGFGGALLQMATGAPPWSAAG 190
BLAST of jgi.p|Trimin1|154048 vs. uniprot
Match: A0A2R5G4S8_9STRA (Mitogen-activated protein kinase kinase kinase NPK1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G4S8_9STRA) HSP 1 Score: 154 bits (389), Expect = 1.010e-40 Identity = 86/194 (44.33%), Postives = 113/194 (58.25%), Query Frame = 1
Query: 13 ILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVHRDLKCANLLVDAGGNVKIADFGTSAVVSQCRGDHGQSRLMGTP--GTPIYMAPELMFQLEGNQGLPVDIWAFGAAVLEMATAQPPWRITGPEGMPSIDYLRCLVARKRAPALPLDLDATLRSLLTQCFCWRSGDRPTCSALLAHDFL 588
I EWVPGGS++ LL FG L VVR+Y RQ L GLAYLH ++HRD+K AN+LVD G +K+ADFG S V+S G G S L GTP +MAPE++ Q G DIW+ G L+M + +PPW+ + ++ Y C AP +P D+ + LRS L CF +RPT ++LL H FL
Sbjct: 77 IFTEWVPGGSIAGLLQKFGGLTESVVRKYTRQILQGLAYLHRKGVIHRDIKGANILVDDRGCIKLADFGASKVLS---GAAGGSILENHSLRGTPYFMAPEVITQT--GHGRKADIWSVGCTTLQMVSGKPPWKSMQFGSLQALMYHICNT--NEAPPMPHDISSALRSFLMICFQRLPAERPTANSLLQHPFL 263 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|154048 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_19103 ID=mRNA_19103|Name=jgi.p|Trimin1|154048|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=588bp|location=Sequence derived from alignment at Contig_508:1354..2978+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. AACGAGCTCTTCATTCTCCAGGAGTGGGTCCCGGGCGGCAGCGTTTCGGCback to top protein sequence of jgi.p|Trimin1|154048 >Trimin1|154048|gw1.508.6.1 ID=Trimin1|154048|gw1.508.6.1|Name=jgi.p|Trimin1|154048|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=196bp NELFILQEWVPGGSVSALLSSFGCLNTKVVRRYARQALHGLAYLHANAIVback to top mRNA from alignment at Contig_508:1354..2978+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_19103 ID=mRNA_19103|Name=jgi.p|Trimin1|154048|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1625bp|location=Sequence derived from alignment at Contig_508:1354..2978+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_508:1354..2978+ >mRNA_19103 ID=mRNA_19103|Name=jgi.p|Trimin1|154048|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=588bp|location=Sequence derived from alignment at Contig_508:1354..2978+ (Tribonema minus UTEX_B_3156 )back to top |