mRNA_1906 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|163535
Unique NamemRNA_1906
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|163535 vs. uniprot
Match: A0A835Z566_9STRA (FirrV-1-B50 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z566_9STRA)

HSP 1 Score: 793 bits (2048), Expect = 3.840e-289
Identity = 391/396 (98.74%), Postives = 393/396 (99.24%), Query Frame = 1
Query:    1 TIWKSVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGDWRLSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEAGRRRFSCGYKDRYDFSHQPQGSVDATKGLPWGDAIDPITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNYSRF 1188
            TIWKSVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGDWRLSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTE GRRRFSCGYKDRYDFSHQ QGSVDATKGLPWGDAID ITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLN+SR+
Sbjct:    1 TIWKSVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGDWRLSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEGGRRRFSCGYKDRYDFSHQQQGSVDATKGLPWGDAIDAITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNFSRY 396          
BLAST of jgi.p|Trimin1|163535 vs. uniprot
Match: A0A835ZCT3_9STRA (FirrV-1-B50 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCT3_9STRA)

HSP 1 Score: 735 bits (1898), Expect = 1.410e-265
Identity = 363/394 (92.13%), Postives = 375/394 (95.18%), Query Frame = 1
Query:   10 KSVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGDWRLSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEAGRRRFSCGYKDRYDFSHQPQGSVDATKGLPWGDAIDPITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNYSRFE 1191
            ++VHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTS+GA AGA YADT A+YVN I FAAWED I+EIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDL EKS REQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSV+YKDSAGDWRLSDLAPINATTGTALVNSDMK+RLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRP DWN E GRRRFSCGYKDR+DFSHQ QG+VDATKGL WGD +DPITTAS SLNGHQRWPQDQN+ YFRVLTPYTSWRTMPTTNIYTYSFALQA DWQPTAHLN SR +
Sbjct:   40 RAVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSSGAGAGAHYADTAAYYVNSIDFAAWEDVILEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLAEKSAREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDSAGDWRLSDLAPINATTGTALVNSDMKLRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPQDWNLEGGRRRFSCGYKDRFDFSHQEQGTVDATKGLAWGDTVDPITTASRSLNGHQRWPQDQNAVYFRVLTPYTSWRTMPTTNIYTYSFALQAQDWQPTAHLNMSRLK 433          
BLAST of jgi.p|Trimin1|163535 vs. uniprot
Match: A0A835Z3V1_9STRA (Putative major capsid protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3V1_9STRA)

HSP 1 Score: 695 bits (1793), Expect = 2.410e-250
Identity = 333/399 (83.46%), Postives = 372/399 (93.23%), Query Frame = 1
Query:    1 TIWKSVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGDWRLSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEAGRRRFSCGYKDRYDFSHQPQGSVDATKGLPWGDAIDPITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNYSRFEIL 1197
            TI+KSVHTRFTS ALDD+FQELSTSGFASTSTAT+SRYGDL+SRITLEIVLP L APDIPDTSAGA AGALYA+TGA+YVNCIG+A WEDCI+EIGGST+DQLFSDFCFIYEE+AGRAG+RLEEA+GRV FS  VD+DLIEKS+REQTLYVPLPLWFSKY PAT+GLALPIVALSFHEIKLKLKTRSIAECVSV+YKD+AGDWRLSDLAPIN  TGTALVNSD+K+RLLVS+VYLDVTERNAMSSVAHS LINVTQRQVM+VAAGS++K E KLF NHPC+ L+WY+RPLDWNTE GRRRFSCGYKDR+DFSHQ +GSVD TKGLPWGD++D ITTASLSLNGHQRWP D  + YFRV+TP+TSWRTMP+T IY+YSFALQAHDWQPT+HLN+SR + +
Sbjct:    1 TIFKSVHTRFTSFALDDDFQELSTSGFASTSTATLSRYGDLISRITLEIVLPALKAPDIPDTSAGASAGALYAETGAYYVNCIGWAVWEDCILEIGGSTIDQLFSDFCFIYEEMAGRAGLRLEEAVGRVAFSEAVDDDLIEKSSREQTLYVPLPLWFSKYNPATFGLALPIVALSFHEIKLKLKTRSIAECVSVVYKDAAGDWRLSDLAPINKATGTALVNSDLKMRLLVSYVYLDVTERNAMSSVAHSMLINVTQRQVMSVAAGSYAKSEQKLFMNHPCTDLIWYLRPLDWNTEGGRRRFSCGYKDRFDFSHQEEGSVDPTKGLPWGDSVDAITTASLSLNGHQRWPADMKANYFRVVTPWTSWRTMPSTPIYSYSFALQAHDWQPTSHLNFSRLDHI 399          
BLAST of jgi.p|Trimin1|163535 vs. uniprot
Match: A0A835Z4S3_9STRA (Large eukaryotic DNA virus major capsid protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4S3_9STRA)

HSP 1 Score: 563 bits (1450), Expect = 1.000e-195
Identity = 273/398 (68.59%), Postives = 332/398 (83.42%), Query Frame = 1
Query:    1 TIWKSVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGDWRLSD-LAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEAGRRRFSCGYKDRYDFSHQPQGSVDATKGLPWGDAIDPITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNYSRFE 1191
            TIW+SVHTRFTSCA+DDEFQ+LS SGF ++S+ATI+RYGDL+SR+TLEI LPPL+AP +P T          ADT AH+VNCIGFA WED  +EIGGS VDQL+SDF  IYEELAGR G+RLEEAIGRV FS  VDEDLIEK+ ++Q LYVPLPLWFSKYQPAT+GLALPIVAL+FH++++K+KTRSI+EC  V+YKD+A  W+L++   P+NA TGTALVN+D+KIRL+V+ VYLD TER AMSSV HSFLI+  QRQV ++AA   +K E KLFFNHP SSL+W++RPLDWNTEAGRRRFSCG++DRYDF+   + S DA+  LP+GDA+DPI TASL+LNGH RWP D +S YFR+  PY +WRTMPTT+IYTYSFAL+AH WQPT+HLN+SR +
Sbjct:  161 TIWRSVHTRFTSCAMDDEFQDLSNSGFDTSSSATINRYGDLISRVTLEITLPPLAAPQVPITGTSPVTYHPAADTAAHWVNCIGFACWEDVQVEIGGSLVDQLYSDFAMIYEELAGRPGVRLEEAIGRVQFSDAVDEDLIEKAKKQQILYVPLPLWFSKYQPATYGLALPIVALTFHDVRIKIKTRSISECTCVLYKDNAA-WKLAENQIPLNANTGTALVNADLKIRLMVTSVYLDTTERTAMSSVVHSFLISTAQRQVHSIAANQSTKQEEKLFFNHPASSLIWFVRPLDWNTEAGRRRFSCGFRDRYDFTAH-EASTDAS--LPYGDAVDPIRTASLTLNGHARWPTDMDSRYFRMHMPYCAWRTMPTTSIYTYSFALEAHQWQPTSHLNFSRLD 554          
BLAST of jgi.p|Trimin1|163535 vs. uniprot
Match: A0A835ZBK3_9STRA (Putative major capsid protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBK3_9STRA)

HSP 1 Score: 525 bits (1352), Expect = 8.220e-183
Identity = 256/399 (64.16%), Postives = 315/399 (78.95%), Query Frame = 1
Query:    1 TIWKSVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGD-WRLSD-LAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEAGRRRFSCGYKDRYDFSHQPQGSVDATKGLPWGDAIDPITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNYSRFE 1191
            TIW++VHTRFTSCA+DDE QELS SGF ++S+ATI+RYGDL+SR++LEIVLPPL+AP+I    A   A    AD  A+YVN IG+A WED  +EIGGS VDQL+SDF  I+EELAGR G+RLEE IG+V +SA+VD+DLIEK++R+QTLYVPLPLW SKYQPATWGLALPIVAL+FH++++K+KTR IA+C  V ++D+    W L + L P+N  T T LVNSD+KIRL+++ VYLDVTER AMSSV HSFLIN  QRQ+  V A   SK+E KL+ NHPCS++ W +RPL+WNT AGRRRFSCG++DRYDFSH+  G+V  T  LP+G+AI PI  ASLSLNGHQRWP D  S+YF    PY  WRTMP T I TYSFAL+A  WQPT+ LN+SR +
Sbjct:   27 TIWRAVHTRFTSCAMDDELQELSNSGFDTSSSATINRYGDLISRVSLEIVLPPLAAPEIAIAGASPAANYAPADCAAYYVNSIGYACWEDVQVEIGGSLVDQLYSDFAVIFEELAGRPGLRLEECIGKVQYSAEVDDDLIEKASRQQTLYVPLPLWMSKYQPATWGLALPIVALTFHDVRIKIKTRPIADCTVVCHRDAVSQAWTLDEGLLPLNGNTLTPLVNSDLKIRLMITSVYLDVTERAAMSSVTHSFLINTAQRQIATVPANVSSKLETKLYLNHPCSAMTWVVRPLNWNTNAGRRRFSCGFRDRYDFSHKEAGTV--TSALPYGNAISPIANASLSLNGHQRWPVDMPSSYFTNHQPYVHWRTMPATPIMTYSFALEAAQWQPTSTLNFSRLD 423          
BLAST of jgi.p|Trimin1|163535 vs. uniprot
Match: A0A835Z0V5_9STRA (Putative major capsid protein n=3 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0V5_9STRA)

HSP 1 Score: 516 bits (1329), Expect = 5.640e-180
Identity = 253/385 (65.71%), Postives = 314/385 (81.56%), Query Frame = 1
Query:   43 LDDEFQELSTSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYA--DTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGDWRLSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEAGRRRFSCGYKDRYDFSHQPQGSVDATKGLPWGDAIDPITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNYSRFE 1191
            +DD+FQELS SGF ++S+ATI+RYGDL+SRITLEI LPPL+AP +P   A  P    YA  DT AH+VN IGFA WED  +EIGGS VDQL+SDF  IYEELAGR G+RLEE+IGRVP+SA+VD DLIEK+ + Q LYVPLPLWFSKYQP+T+GLALPIVAL+FH+++LK+KTRSIA+C  V+YK+    W L+DLAP+NA+TGT LVN+D+KIRL+VS VYLD TER AMS+V HSFLIN TQRQV ++AAG  ++ E KL+FNHP SSL+W +RPLDWNT+AGRRRFSCG+KDR+DF+       D+   L +G+A+DPI ++SLSLNGHQRWP D  S YFR   PY +WRT+P+T+IY+YSFAL+A  WQPT+HLN+SR +
Sbjct:    1 MDDDFQELSNSGFDTSSSATINRYGDLISRITLEIRLPPLAAPQVPVVPATNPV-TYYASEDTAAHWVNAIGFACWEDVQVEIGGSLVDQLYSDFAMIYEELAGRPGVRLEESIGRVPYSAEVDLDLIEKAQKAQILYVPLPLWFSKYQPSTYGLALPIVALTFHDVRLKIKTRSIADCTCVVYKED-DVWHLTDLAPLNASTGTTLVNADLKIRLMVSSVYLDTTERTAMSTVTHSFLINTTQRQVHSIAAGQSTRQEEKLYFNHPSSSLIWIVRPLDWNTQAGRRRFSCGFKDRFDFTAYEASDDDS---LIYGNAVDPIVSSSLSLNGHQRWPTDMPSTYFRTHVPYCNWRTLPSTSIYSYSFALEASAWQPTSHLNFSRLD 380          
BLAST of jgi.p|Trimin1|163535 vs. uniprot
Match: Q6XLY6_9PHYC (FirrV-1-B50 n=2 Tax=root TaxID=1 RepID=Q6XLY6_9PHYC)

HSP 1 Score: 326 bits (835), Expect = 5.790e-105
Identity = 179/405 (44.20%), Postives = 257/405 (63.46%), Query Frame = 1
Query:    1 TIWKSVHTRFTSCALDDEFQELS--TSGFASTSTATISRYGDLVSRITLEIVLPPLSAP-DIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKD---SAGDWRL--SDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEAGRRRFSCGYKDRYDFSHQPQGSVDATKGLPWGDAIDPITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNYSRFE 1191
            T++K+VH RFTS A D E  + S  T GF    +ATISRYGDLV+ + +EI LPP+ A  ++ D S    A A   D  A++VN IGFA   +  IEIGG+ VD L+ ++ F +EE+  R G RL E IG+  +SADV+ED+IE + + +TLYVPLP WF+KY     GL++P++AL++HEIK+K+  R ++EC  V+Y+    + G++        P+N+T+G+ LV+SDM  +LLVS+VYLD  ER+A ++  H++LI  TQRQ+ A+ +   S  + KL+FNHP + L W++RP DW T   RRR+S G+ D +D+S +    V       WGD  DP+ TASL+LNGH R+P +    +FR   P   W       +Y +SF+LQ   WQPT+ LN SR +
Sbjct:    2 TLFKTVHRRFTSFAEDLEENDFSAGTVGFGQKVSATISRYGDLVTDMFMEIHLPPIEAAVNVTDASGNTVADA---DKAAYWVNAIGFALISEVQIEIGGTEVDILYPEWMFFWEEMTQRPGARLGEQIGKFTYSADVEEDMIEFAQQARTLYVPLPFWFNKYFMEA-GLSIPLIALTYHEIKVKVTFRPLSECCCVVYRTEDPTHGEYYALAEGKVPVNSTSGSTLVSSDMDAKLLVSYVYLDKKERDAFATTEHTYLITTTQRQMHAITSAGSSSDQIKLYFNHPSNCLTWFVRPTDWMTN--RRRYSVGHMDLFDYSLKSTSDVSV-----WGDVTDPVKTASLTLNGHSRFPDNMPGLFFRQTQPIMKWPNCSNGYMYVFSFSLQGGSWQPTSTLNMSRID 395          
BLAST of jgi.p|Trimin1|163535 vs. uniprot
Match: B5LWE8_9PHYC (Putative major capsid protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWE8_9PHYC)

HSP 1 Score: 323 bits (828), Expect = 6.560e-104
Identity = 174/404 (43.07%), Postives = 252/404 (62.38%), Query Frame = 1
Query:    1 TIWKSVHTRFTSCALDDEFQELS--TSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYK---DSAGDW--RLSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEAGRRRFSCGYKDRYDFSHQPQGSVDATKGLPWGDAIDPITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNYSRFE 1191
            T++K+VH R+TS A D E  + S  T GF    +A +SRYGDLV+ + +E+ LPP+ A      + G       AD  A++VN IG+A   +  IEIGG+ VD L+ ++ F +E +  R G RL E IG+  +SADV+ED+IE + + +TLYVPLP WF+KY   T GL++P++AL++HEIK+K+  R ++EC  V+Y+   ++ G++        P+N T+G+ LV+SDM  +LL+S+VYLD  ER+A +S  HS+LI  TQRQ+ A+ +   +  + KL+FNHP + L W++RP DW T   RRRFS G+ D +DFS      V       WGD IDP+ +ASL+LNGH R+P      +FR   P   W       +Y +SF+LQ   WQPT+ LN SR +
Sbjct:    2 TLFKTVHKRYTSFAEDLEENDFSAGTVGFGQKVSANVSRYGDLVTDMFMEVALPPIEAAATVTNAEGVEVAD--ADKAAYWVNAIGYALISEIQIEIGGTEVDTLYPEWMFFWESMTQRPGARLGEQIGKFAYSADVEEDMIEFAQQARTLYVPLPFWFNKYFMET-GLSIPLIALTYHEIKVKVTFRPLSECCCVVYRAEDETHGEYFALAEGKTPVNTTSGSTLVSSDMDAKLLISYVYLDKAERDAFASTEHSYLITRTQRQLHAITSAGSASDQIKLYFNHPSNCLAWFVRPTDWTTN--RRRFSVGHMDSFDFSLHTDSDVSV-----WGDVIDPVKSASLNLNGHSRFPDGMPGLFFRQTQPIMKWPNCSDGFMYVFSFSLQGGAWQPTSTLNMSRID 395          
BLAST of jgi.p|Trimin1|163535 vs. uniprot
Match: Q8QNG3_ESV1K (EsV-1-116 n=4 Tax=root TaxID=1 RepID=Q8QNG3_ESV1K)

HSP 1 Score: 323 bits (829), Expect = 1.620e-103
Identity = 178/407 (43.73%), Postives = 255/407 (62.65%), Query Frame = 1
Query:    1 TIWKSVHTRFTSCALDDEFQELS--TSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATW---GLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGDWR-----LSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEAGRRRFSCGYKDRYDFSHQPQGSVDATKGLPWGDAIDPITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNYSRFE 1191
            T++KS H R+T+ A D E  + S  T GF    +A +SRYGDLVS + LE+ LP + A +     AG       AD  A++VN IG+A   +  IEIGG+ VD L+S++ F++EEL  R G RL E IG+  +SADV+ED+IE +++E+ LYVPLP WF+KY    W   GL++P++AL++HEIK+K+  R +A+C +V+Y++S   W       +D  PIN  + +A+  SDM  RLLVS+VYLD  ER A +SV H +LI  TQRQ+ ++ + S    + KL+FNHP ++L+W++RP D+     RRRFS G+KD +DFS Q +   DAT  + WGD  D + +ASL+LNGH R+P      +FR + P   W   P    Y ++FA     W PT+ LN SR +
Sbjct:    2 TLFKSQHKRYTNFAEDFEENDFSAGTVGFGQRVSANVSRYGDLVSDVLLEVTLPAIQASESVVNGAGTEVAD--ADKAAYWVNAIGYAIISEVEIEIGGTEVDTLYSEWMFLWEELTQRPGARLGEQIGKFAYSADVEEDMIEFASQERKLYVPLPFWFNKY----WMEHGLSIPLIALTYHEIKIKVSFRPLADCCAVVYRESDPTWGDYWALAADKIPINTASASAMAASDMDARLLVSYVYLDQEERQAFASVQHEYLITTTQRQMHSITSASAKSDQLKLYFNHPSNALIWFVRPTDFKNL--RRRFSVGHKDMFDFSLQKE---DATVSM-WGDVTDSVASASLTLNGHSRFPDSLPGLFFRQVQPALKWPNTPAGYTYLFTFAALGGVWNPTSTLNMSRID 396          
BLAST of jgi.p|Trimin1|163535 vs. uniprot
Match: Q4H484_HAV01 (Hypothetical major capsid protein n=1 Tax=Heterosigma akashiwo virus 01 TaxID=97195 RepID=Q4H484_HAV01)

HSP 1 Score: 167 bits (422), Expect = 1.290e-43
Identity = 127/404 (31.44%), Postives = 209/404 (51.73%), Query Frame = 1
Query:    1 TIWKSVHTRFTSCALDDEFQELS-TSGFASTSTATISRYGDLVSRITLEIVLPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTVDQLFSDFCFIYEELAGRAGMR--LEEAIGRVPFSADVDEDLIEKSTREQTLYVPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSAGDWRLSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSFLINVTQRQVMAVAAGSFSKIENKLF--FNHPCSSLLWYMRPLDWNTEAGRRRFSCGYKDRYDFSHQPQGSVDATKGLPWGDAIDPITTASLSLNGHQRWPQDQNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNYSRFEIL 1197
            T +K V+ R T+ A++   Q  + T+ F    T TISR GDL++ + L++ LP LS   +   ++G+P       T   + N IG A   +  +EIGG  +D+ F  +  I++EL      +    + IG+  +++++   LI  S  E+  Y+PL  WF +      GL+LP+VAL +HE+K+ ++ R+  EC+ V  K +     + D A    TT T + N+    +L V ++YLD  ER   ++ +H +L+   Q Q     + SFS+   KL   FNHP   LLW ++  + +T AG       Y D ++FS    G+   +       A+D +  A L LNGH+R+   +   YFR++ PY     +P  +IY YSFA++  + QP+   N+SR + +
Sbjct:   25 TFFKVVYRRHTNFAIESIEQTFNGTADFGKKVTCTISRNGDLINHVYLQVQLPSLSTGLV---ASGSP-------TYVSWTNAIGHALIRNVEVEIGGQRIDRQFGTWLEIWDELTMTTEKKNGYNQMIGK--YASELG--LIGNSYYERIYYIPLQFWFCRNP----GLSLPLVALQYHEVKIIIEFRNAHECI-VALKANGDRVAIGDNATTFTTTPT-ITNA----QLYVDYIYLDTNERKLFAATSHEYLVE--QLQFTGAESLSFSQQNQKLRLNFNHPVKELLWVLQRDENSTSAG-----TAYNDWFNFSAAAPGTPSPSH------AVDLLADAKLLLNGHERFTV-RPQTYFRLVQPYQHHTRIPDKHIYLYSFAIRPEEHQPSGTCNFSRIDTV 390          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163535 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z566_9STRA3.840e-28998.74FirrV-1-B50 n=2 Tax=Tribonema minus TaxID=303371 R... [more]
A0A835ZCT3_9STRA1.410e-26592.13FirrV-1-B50 n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A835Z3V1_9STRA2.410e-25083.46Putative major capsid protein n=1 Tax=Tribonema mi... [more]
A0A835Z4S3_9STRA1.000e-19568.59Large eukaryotic DNA virus major capsid protein-do... [more]
A0A835ZBK3_9STRA8.220e-18364.16Putative major capsid protein n=1 Tax=Tribonema mi... [more]
A0A835Z0V5_9STRA5.640e-18065.71Putative major capsid protein n=3 Tax=Tribonema mi... [more]
Q6XLY6_9PHYC5.790e-10544.20FirrV-1-B50 n=2 Tax=root TaxID=1 RepID=Q6XLY6_9PHY... [more]
B5LWE8_9PHYC6.560e-10443.07Putative major capsid protein n=1 Tax=Feldmannia s... [more]
Q8QNG3_ESV1K1.620e-10343.73EsV-1-116 n=4 Tax=root TaxID=1 RepID=Q8QNG3_ESV1K[more]
Q4H484_HAV011.290e-4331.44Hypothetical major capsid protein n=1 Tax=Heterosi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_26contigContig_26:469283..470500 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|163535|e_gw1.26.275.1
GOsGO:0005575,GO:0019012
DescriptionLarge eukaryotic DNA virus major capsid protein
COG categoryS
Max annot lvl10239|Viruses
EggNOG OGs4QAX7@10239|Viruses,4QXNA@35237|dsDNA viruses no RNA stage
Evalue2.65e-104
Seed ortholog654926.Q8QNG3_ESV1K
Hectar predicted targeting categoryother localisation
TranscriptId163857
TrackFilteredModels1
ProteinId163535
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163535gene_1906Tribonema minus UTEX_B_3156 geneContig_26 469283..470500 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1906_1exon_1906_1Tribonema minus UTEX_B_3156 exonContig_26 469283..470500 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1906CDS_1906Tribonema minus UTEX_B_3156 CDSContig_26 469283..470500 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163535Trimin1|163535|e_gw1.26.275.1Tribonema minus UTEX_B_3156 polypeptideContig_26 469283..470500 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1906 ID=mRNA_1906|Name=jgi.p|Trimin1|163535|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1218bp|location=Sequence derived from alignment at Contig_26:469283..470500+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ACGATATGGAAAAGCGTCCACACGCGCTTCACTTCCTGCGCCCTAGATGA
TGAGTTCCAGGAACTCTCGACTAGCGGCTTCGCGTCCACCAGTACCGCCA
CCATCTCCCGTTATGGCGACTTGGTGAGCCGCATTACCCTCGAAATTGTG
CTTCCTCCTCTTTCTGCCCCCGACATCCCTGACACCTCCGCTGGAGCGCC
GGCCGGGGCACTGTACGCCGACACTGGCGCTCACTATGTGAACTGCATCG
GCTTCGCTGCCTGGGAGGATTGCATCATCGAGATCGGCGGGTCTACTGTC
GACCAGCTGTTCAGCGACTTCTGCTTCATCTATGAGGAGCTCGCTGGGCG
CGCTGGCATGCGGCTCGAAGAGGCCATCGGGCGTGTGCCCTTTAGCGCCG
ATGTCGATGAGGACCTCATCGAAAAGAGCACGCGTGAGCAGACCCTGTAT
GTCCCCCTTCCTCTGTGGTTCAGTAAGTACCAACCGGCTACATGGGGCCT
AGCATTACCTATTGTAGCACTCAGCTTCCATGAGATCAAGCTGAAGCTGA
AGACCCGTTCCATTGCAGAGTGTGTTTCCGTCATTTACAAGGATAGTGCT
GGCGACTGGCGCCTGTCGGACCTGGCTCCGATCAACGCCACCACCGGCAC
TGCGCTGGTTAACAGCGACATGAAGATCCGCCTCCTTGTCAGCTTCGTTT
ACCTGGATGTTACCGAACGTAACGCCATGTCTTCGGTGGCCCACTCCTTC
CTCATTAATGTCACCCAGCGCCAGGTCATGGCTGTCGCTGCTGGATCGTT
CTCCAAGATTGAGAACAAGCTTTTCTTCAACCACCCCTGTTCCTCGCTCC
TGTGGTACATGCGTCCCCTGGACTGGAACACGGAGGCCGGCCGTCGTCGC
TTCTCGTGCGGCTATAAGGACAGGTATGATTTCAGCCACCAGCCGCAAGG
CTCTGTGGATGCTACCAAGGGCCTTCCATGGGGGGACGCTATAGATCCTA
TCACGACGGCCTCGCTCTCCCTTAACGGACACCAGCGCTGGCCACAAGAC
CAGAACTCAGCCTACTTCAGGGTGCTTACGCCGTACACGAGCTGGCGGAC
GATGCCCACGACCAACATCTACACATATTCCTTTGCATTGCAGGCACATG
ACTGGCAGCCGACAGCGCATCTTAACTATAGCCGGTTCGAAATTTTATTC
AGACCTGAAAAACGGTAG
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protein sequence of jgi.p|Trimin1|163535

>Trimin1|163535|e_gw1.26.275.1 ID=Trimin1|163535|e_gw1.26.275.1|Name=jgi.p|Trimin1|163535|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=406bp
TIWKSVHTRFTSCALDDEFQELSTSGFASTSTATISRYGDLVSRITLEIV
LPPLSAPDIPDTSAGAPAGALYADTGAHYVNCIGFAAWEDCIIEIGGSTV
DQLFSDFCFIYEELAGRAGMRLEEAIGRVPFSADVDEDLIEKSTREQTLY
VPLPLWFSKYQPATWGLALPIVALSFHEIKLKLKTRSIAECVSVIYKDSA
GDWRLSDLAPINATTGTALVNSDMKIRLLVSFVYLDVTERNAMSSVAHSF
LINVTQRQVMAVAAGSFSKIENKLFFNHPCSSLLWYMRPLDWNTEAGRRR
FSCGYKDRYDFSHQPQGSVDATKGLPWGDAIDPITTASLSLNGHQRWPQD
QNSAYFRVLTPYTSWRTMPTTNIYTYSFALQAHDWQPTAHLNYSRFEILF
RPEKR*
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mRNA from alignment at Contig_26:469283..470500+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1906 ID=mRNA_1906|Name=jgi.p|Trimin1|163535|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1218bp|location=Sequence derived from alignment at Contig_26:469283..470500+ (Tribonema minus UTEX_B_3156 )
ACGATATGGAAAAGCGTCCACACGCGCTTCACTTCCTGCGCCCTAGATGA TGAGTTCCAGGAACTCTCGACTAGCGGCTTCGCGTCCACCAGTACCGCCA CCATCTCCCGTTATGGCGACTTGGTGAGCCGCATTACCCTCGAAATTGTG CTTCCTCCTCTTTCTGCCCCCGACATCCCTGACACCTCCGCTGGAGCGCC GGCCGGGGCACTGTACGCCGACACTGGCGCTCACTATGTGAACTGCATCG GCTTCGCTGCCTGGGAGGATTGCATCATCGAGATCGGCGGGTCTACTGTC GACCAGCTGTTCAGCGACTTCTGCTTCATCTATGAGGAGCTCGCTGGGCG CGCTGGCATGCGGCTCGAAGAGGCCATCGGGCGTGTGCCCTTTAGCGCCG ATGTCGATGAGGACCTCATCGAAAAGAGCACGCGTGAGCAGACCCTGTAT GTCCCCCTTCCTCTGTGGTTCAGTAAGTACCAACCGGCTACATGGGGCCT AGCATTACCTATTGTAGCACTCAGCTTCCATGAGATCAAGCTGAAGCTGA AGACCCGTTCCATTGCAGAGTGTGTTTCCGTCATTTACAAGGATAGTGCT GGCGACTGGCGCCTGTCGGACCTGGCTCCGATCAACGCCACCACCGGCAC TGCGCTGGTTAACAGCGACATGAAGATCCGCCTCCTTGTCAGCTTCGTTT ACCTGGATGTTACCGAACGTAACGCCATGTCTTCGGTGGCCCACTCCTTC CTCATTAATGTCACCCAGCGCCAGGTCATGGCTGTCGCTGCTGGATCGTT CTCCAAGATTGAGAACAAGCTTTTCTTCAACCACCCCTGTTCCTCGCTCC TGTGGTACATGCGTCCCCTGGACTGGAACACGGAGGCCGGCCGTCGTCGC TTCTCGTGCGGCTATAAGGACAGGTATGATTTCAGCCACCAGCCGCAAGG CTCTGTGGATGCTACCAAGGGCCTTCCATGGGGGGACGCTATAGATCCTA TCACGACGGCCTCGCTCTCCCTTAACGGACACCAGCGCTGGCCACAAGAC CAGAACTCAGCCTACTTCAGGGTGCTTACGCCGTACACGAGCTGGCGGAC GATGCCCACGACCAACATCTACACATATTCCTTTGCATTGCAGGCACATG ACTGGCAGCCGACAGCGCATCTTAACTATAGCCGGTTCGAAATTTTATTC AGACCTGAAAAACGGTAG
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Coding sequence (CDS) from alignment at Contig_26:469283..470500+

>mRNA_1906 ID=mRNA_1906|Name=jgi.p|Trimin1|163535|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1218bp|location=Sequence derived from alignment at Contig_26:469283..470500+ (Tribonema minus UTEX_B_3156 )
ACGATATGGAAAAGCGTCCACACGCGCTTCACTTCCTGCGCCCTAGATGA
TGAGTTCCAGGAACTCTCGACTAGCGGCTTCGCGTCCACCAGTACCGCCA
CCATCTCCCGTTATGGCGACTTGGTGAGCCGCATTACCCTCGAAATTGTG
CTTCCTCCTCTTTCTGCCCCCGACATCCCTGACACCTCCGCTGGAGCGCC
GGCCGGGGCACTGTACGCCGACACTGGCGCTCACTATGTGAACTGCATCG
GCTTCGCTGCCTGGGAGGATTGCATCATCGAGATCGGCGGGTCTACTGTC
GACCAGCTGTTCAGCGACTTCTGCTTCATCTATGAGGAGCTCGCTGGGCG
CGCTGGCATGCGGCTCGAAGAGGCCATCGGGCGTGTGCCCTTTAGCGCCG
ATGTCGATGAGGACCTCATCGAAAAGAGCACGCGTGAGCAGACCCTGTAT
GTCCCCCTTCCTCTGTGGTTCAGTAAGTACCAACCGGCTACATGGGGCCT
AGCATTACCTATTGTAGCACTCAGCTTCCATGAGATCAAGCTGAAGCTGA
AGACCCGTTCCATTGCAGAGTGTGTTTCCGTCATTTACAAGGATAGTGCT
GGCGACTGGCGCCTGTCGGACCTGGCTCCGATCAACGCCACCACCGGCAC
TGCGCTGGTTAACAGCGACATGAAGATCCGCCTCCTTGTCAGCTTCGTTT
ACCTGGATGTTACCGAACGTAACGCCATGTCTTCGGTGGCCCACTCCTTC
CTCATTAATGTCACCCAGCGCCAGGTCATGGCTGTCGCTGCTGGATCGTT
CTCCAAGATTGAGAACAAGCTTTTCTTCAACCACCCCTGTTCCTCGCTCC
TGTGGTACATGCGTCCCCTGGACTGGAACACGGAGGCCGGCCGTCGTCGC
TTCTCGTGCGGCTATAAGGACAGGTATGATTTCAGCCACCAGCCGCAAGG
CTCTGTGGATGCTACCAAGGGCCTTCCATGGGGGGACGCTATAGATCCTA
TCACGACGGCCTCGCTCTCCCTTAACGGACACCAGCGCTGGCCACAAGAC
CAGAACTCAGCCTACTTCAGGGTGCTTACGCCGTACACGAGCTGGCGGAC
GATGCCCACGACCAACATCTACACATATTCCTTTGCATTGCAGGCACATG
ACTGGCAGCCGACAGCGCATCTTAACTATAGCCGGTTCGAAATTTTATTC
AGACCTGAAAAACGGTAG
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