mRNA_19030 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354733
Unique NamemRNA_19030
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|354733 vs. uniprot
Match: A0A835Z0Q7_9STRA (SWIM-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0Q7_9STRA)

HSP 1 Score: 425 bits (1093), Expect = 1.650e-143
Identity = 222/257 (86.38%), Postives = 224/257 (87.16%), Query Frame = 1 
Query:   40 QDQVERAMEFGLDVIQQ------------------------------ALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 720
            QDQVERAMEFGLDVIQQ                              ALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRA RAPTEASFQGA KGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTT C+LKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVAR+DGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
Sbjct:   84 QDQVERAMEFGLDVIQQDCTFGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRALRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTFCYLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARRDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 340
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BLAST of jgi.p|Trimin1|354733 vs. uniprot
Match: A0A836CA74_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CA74_9STRA)

HSP 1 Score: 430 bits (1105), Expect = 1.070e-141
Identity = 224/257 (87.16%), Postives = 226/257 (87.94%), Query Frame = 1 
Query:   40 QDQVERAMEFGLDVIQQ------------------------------ALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 720
            QDQVERAMEFGLDVIQQ                              ALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGA KGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINST+RCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVAR+DGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
Sbjct:  209 QDQVERAMEFGLDVIQQDCTFGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTRRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARRDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 465
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BLAST of jgi.p|Trimin1|354733 vs. uniprot
Match: A0A835Z7W2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7W2_9STRA)

HSP 1 Score: 407 bits (1047), Expect = 1.790e-131
Identity = 223/300 (74.33%), Postives = 225/300 (75.00%), Query Frame = 1 
Query:   40 QDQVERAMEFGLDVIQQ------------------------------ALLEREDTEAFSWFFVHYVKMVGGHYP-------------------------------------------SMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 720
            QDQVERAMEFGLDVIQQ                              ALLEREDTEAFSWFFVHYVKMVGGHYP                                            MFRSLMQRASRAPTEASFQGA KGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINST+RCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVAR+DGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
Sbjct:  261 QDQVERAMEFGLDVIQQDCTLGTNKYGLALSIIVGVNGDSKTRMFCQALLEREDTEAFSWFFVHYVKMVGGHYPFVCFTDRLSSQAIGVKAQACERNQQCKYAGYKLYQEARHIAAQEMFRSLMQRASRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTRRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARRDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 560
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BLAST of jgi.p|Trimin1|354733 vs. uniprot
Match: A0A835Z031_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z031_9STRA)

HSP 1 Score: 361 bits (927), Expect = 2.790e-125
Identity = 182/182 (100.00%), Postives = 182/182 (100.00%), Query Frame = 1 
Query:  175 MFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 720
            MFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
Sbjct:    1 MFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 182
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BLAST of jgi.p|Trimin1|354733 vs. uniprot
Match: A0A835ZEP9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEP9_9STRA)

HSP 1 Score: 357 bits (916), Expect = 1.320e-123
Identity = 180/182 (98.90%), Postives = 181/182 (99.45%), Query Frame = 1 
Query:  175 MFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 720
            MFRSLMQRASRAPTEASFQGA KGLLDAL+DAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
Sbjct:    1 MFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA 182
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BLAST of jgi.p|Trimin1|354733 vs. uniprot
Match: A0A835ZA29_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA29_9STRA)

HSP 1 Score: 320 bits (821), Expect = 8.240e-108
Identity = 159/163 (97.55%), Postives = 160/163 (98.16%), Query Frame = 1 
Query:    1 MDCPEPVNEPLEGQDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYT 489
            MDCPEPVNEPLEGQDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGA KGLLDAL+DAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITA  T
Sbjct:    1 MDCPEPVNEPLEGQDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALLDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITASTT 163
[Close]
BLAST of jgi.p|Trimin1|354733 vs. uniprot
Match: A0A835ZD50_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD50_9STRA)

HSP 1 Score: 295 bits (756), Expect = 3.270e-98
Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 1 
Query:   40 QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITAR 483
            QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGA KGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITAR
Sbjct:  104 QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGAWKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITAR 251
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BLAST of jgi.p|Trimin1|354733 vs. uniprot
Match: A0A835ZIG4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIG4_9STRA)

HSP 1 Score: 183 bits (464), Expect = 1.530e-54
Identity = 104/198 (52.53%), Postives = 131/198 (66.16%), Query Frame = 1 
Query:   40 QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFK 633
            QDQVERA EFGLDVI Q            W   H++K V G    +  SL       PTE  F  A   L DAL  AGA+D +V+ YL++TIYPIR RWAFC+R+G+LTLGINSTQRCEGYFG++KAEL+K+ TL HL +TL  IT +Y S+D +YM AT R  A DVA++ +   L+ +Y +LL VA+QDGT HC +
Sbjct:   26 QDQVERANEFGLDVIMQ------------W---HFMKNVKG---KLLSSLGAAWEATPTEECFDAAWDALGDALGSAGAADAEVLGYLDNTIYPIRRRWAFCFRIGILTLGINSTQRCEGYFGLIKAELVKLGTLTHLLETLARITHKYNSDDAIYMAATNR--ALDVAMKEVVPVLRIMYSSLLDVAQQDGTLHCLR 203
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BLAST of jgi.p|Trimin1|354733 vs. uniprot
Match: A0A835ZDE2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDE2_9STRA)

HSP 1 Score: 186 bits (473), Expect = 6.930e-54
Identity = 103/198 (52.02%), Postives = 129/198 (65.15%), Query Frame = 1 
Query:   40 QDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFK 633
            QDQVERA EFGLDVI Q                             F+  + RASRAPTE  F  A   L DAL  AGA+D +V+ YL++TIYPIR RWAFC+R+G+L LGINSTQRCEGYFG++KAEL+K+ TL HL +TL  IT +Y S+D +YM AT R  A DVA++ +D  L+ +Y +LL VA+QDGT HC +
Sbjct:  200 QDQVERANEFGLDVIMQT----------------------------FKHHLHRASRAPTEECFDAAWDALGDALGSAGAADAEVLGYLDNTIYPIRRRWAFCFRIGILILGINSTQRCEGYFGLIKAELVKLGTLTHLLETLARITHKYNSDDAIYMAATNR--ALDVAMKEVDPVLRIMYSSLLDVAQQDGTLHCLR 367
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BLAST of jgi.p|Trimin1|354733 vs. uniprot
Match: A0A836CNV1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNV1_9STRA)

HSP 1 Score: 187 bits (475), Expect = 7.510e-53
Identity = 103/197 (52.28%), Postives = 129/197 (65.48%), Query Frame = 1 
Query:   43 DQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVKMVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKYLNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCHLKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLVARQDGTYHCFK 633
            DQVERA EFGLDVI Q                             F+  + RASRAPTE  F  A   L DAL  AGA+D +V+ YL++TIYPIR RWAFC+R+G+LTLGINSTQRCEGYFG++KAEL+K+ TL HL +TL  IT +Y S+D +YM AT R  A DVA++ +D  L+ +Y +LL VA+QDGT HC +
Sbjct:  339 DQVERANEFGLDVIMQT----------------------------FKHHLHRASRAPTEECFDAAWDALGDALGSAGAADAEVLGYLDNTIYPIRRRWAFCFRIGILTLGINSTQRCEGYFGLIKAELVKLGTLTHLLETLARITHKYNSDDAIYMAATNR--ALDVAMKEVDPVLRIMYSSLLDVAQQDGTLHCLR 505
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354733 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A835Z0Q7_9STRA1.650e-14386.38SWIM-type domain-containing protein n=1 Tax=Tribon... [more]
A0A836CA74_9STRA1.070e-14187.16Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z7W2_9STRA1.790e-13174.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z031_9STRA2.790e-125100.00Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A835ZEP9_9STRA1.320e-12398.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZA29_9STRA8.240e-10897.55Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZD50_9STRA3.270e-9899.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZIG4_9STRA1.530e-5452.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZDE2_9STRA6.930e-5452.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CNV1_9STRA7.510e-5352.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_516contigContig_516:510..5523 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354733|estExt_Genemark1.C_Ctg_5160002
Hectar predicted targeting categoryother localisation
TranscriptId355055
TrackFilteredModels1
ProteinId354733
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354733gene_19030Tribonema minus UTEX_B_3156 geneContig_516 510..5523 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354733Trimin1|354733|estExt_Genemark1.C_Ctg_5160002Tribonema minus UTEX_B_3156 polypeptideContig_516 510..5522 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_19030_1exon_19030_1Tribonema minus UTEX_B_3156 exonContig_516 510..551 +
exon_19030_2exon_19030_2Tribonema minus UTEX_B_3156 exonContig_516 1584..1631 +
exon_19030_3exon_19030_3Tribonema minus UTEX_B_3156 exonContig_516 2832..2915 +
exon_19030_4exon_19030_4Tribonema minus UTEX_B_3156 exonContig_516 4707..5014 +
exon_19030_5exon_19030_5Tribonema minus UTEX_B_3156 exonContig_516 5285..5523 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_19030CDS_19030Tribonema minus UTEX_B_3156 CDSContig_516 510..551 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_19030UTR3_19030Tribonema minus UTEX_B_3156 three_prime_UTRContig_516 5523..5523 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_19030 ID=mRNA_19030|Name=jgi.p|Trimin1|354733|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=721bp|location=Sequence derived from alignment at Contig_516:510..5523+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGACTGCCCTGAGCCTGTCAACGAGCCCTTGGAGGGGCAGGACCAGGT
TGAGAGGGCGATGGAGTTTGGCTTGGATGTCATTCAACAGGCGCTGCTGG
AACGTGAGGACACGGAGGCGTTTTCGTGGTTCTTTGTCCACTATGTGAAG
ATGGTCGGCGGCCACTATCCGTCCATGTTCAGGAGCCTTATGCAGCGCGC
ATCGCGTGCTCCTACGGAAGCCAGTTTTCAGGGGGCGCGGAAGGGACTGT
TGGACGCCCTAGTGGATGCTGGCGCCAGCGATGACGATGTCATGAAGTAC
CTCAACGACACGATCTACCCCATCCGGGAGCGCTGGGCATTCTGCTATCG
CCTTGGCGTCCTCACCCTCGGCATCAACTCTACTCAACGTTGCGAGGGGT
ACTTTGGCATCCTGAAAGCGGAACTGTTGAAGGTCACCACGCTCTGCCAC
CTGAAGCAAACGCTTGAAAATATCACTGCCAGGTACACCTCGGAAGATCA
TCTGTACATGGAGGCCACCGTTCGCACGGCTGCTTATGACGTAGCTCTGG
AGGGCATGGACTCCTGTCTGCAAGCCATATACCGCAACCTACTGCTTGTG
GCGCGGCAAGACGGCACCTACCACTGCTTCAAGTCTCTTGTGAGCCAAGT
GCGGTCTGCAGATCGGTACTCTGTCAGGACGTGTGCACGGGAGAGCGTGC
TGACCGTGAACAGCGATGCTG
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protein sequence of jgi.p|Trimin1|354733

>Trimin1|354733|estExt_Genemark1.C_Ctg_5160002 ID=Trimin1|354733|estExt_Genemark1.C_Ctg_5160002|Name=jgi.p|Trimin1|354733|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=240bp
MDCPEPVNEPLEGQDQVERAMEFGLDVIQQALLEREDTEAFSWFFVHYVK
MVGGHYPSMFRSLMQRASRAPTEASFQGARKGLLDALVDAGASDDDVMKY
LNDTIYPIRERWAFCYRLGVLTLGINSTQRCEGYFGILKAELLKVTTLCH
LKQTLENITARYTSEDHLYMEATVRTAAYDVALEGMDSCLQAIYRNLLLV
ARQDGTYHCFKSLVSQVRSADRYSVRTCARESVLTVNSDA
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mRNA from alignment at Contig_516:510..5523+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_19030 ID=mRNA_19030|Name=jgi.p|Trimin1|354733|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5014bp|location=Sequence derived from alignment at Contig_516:510..5523+ (Tribonema minus UTEX_B_3156 )
ATGGACTGCCCTGAGCCTGTCAACGAGCCCTTGGAGGGGCAGGTGAGACG
ATTTGCGACAGCACCCTTCGGGACTGCTGCAGCAGCTGTTGCTGTCTGTT
TTCATACATCCTGCTGCGGCACTCGCCACGCAGGAGTTCGCCACGCAGGA
ATAGCCGTCGTACACCTTCGCGTATCCAATATTGCGCGCCAGCCTGCGTT
CAACGTTGCTGCGACACCAGCCCATCATCCTGCTCCACTTCTACTCGTTG
GCAGTTGGTCCCACAGTAATAATACAGCCCTCACCCGCGTTCGGCGATGT
CTGACATGTCTGACACGCCTCCTCGTTGCTCGTGATGCTTTCAATATTTA
TGACACAGGTCATTGCGGAGCTGCTAAACAGACGCTTTAATACTTCACAG
GAAGCGTTGAGCGCAGTCAAGCCATTGGCTGCAGCTGCTGGCTTCGTCGC
CTTAATGAGATCAAAGCATGCCAACAGCTACGACATCTACTGCAACCGTG
CGGGAAACCCCCTGTGAAGCGGTCAGATCAATGCCCAGATGTCAAGGCTC
GGTCAGTAAAGCCTTGCATCAGGTGCGAGTGGCGGTTGAAAGTAGTGCTT
GAAACCTCTGTGGAGAACTCACAGCATGCCAACATTGGCCCCCAGTGGCG
TGTGAAGCTACCGGCCAACAACACCCCATGCTCCTTCAGGGAGGGCCACA
ACCATGACTTTGCCGTGCTTGCGGGATCACCACCACCATCTAATGCTGGG
CGCATCATCACCAAAGCAGAGCTCACTGAAGAGATCATTTCATGTGTGCA
GGCCCTGTGCGTTGCGCCCAACATGCGTGGCAAAACGCTGCAGCGTGCTG
TAGTCAGCCTGTATTTTGGTGGTGACTTTGCTGCAGTCTTTGACCAGCCT
GCCCTTCATGTGCTCAACAACACGGCAGCAAAGGTAGCAGATAGAATTGC
CTTCACAACAGGTGACTGCCAGGAGTTCATCAAACAGCTCGGCGCAGTGC
AGAAAGCTGGAGGATACGCGGAATACGAGTTAGCGGACGACTGCTCGTTC
AAGCGTGCTTTCTGAGCGACCCAGGACCAGGTTGAGAGGGCGATGGAGTT
TGGCTTGGATGTCATTCAACAGGTATGCACCTCTGTGTTTTGGCTTTAGA
ACGGTGCAGATCCAAGCAGAATGGGGCAATTATCCTCGCCGTCAAGTGCC
CGCTACCAAATAGGTTGCAGTATTTCTGGCTTGGCCCGCCATTGCGATGA
ATTGATCATGGCTCGGTACAAGTCAACTGCAGTACTGCCAGAGACAAATA
CTGTTACAGTGTGAAGGTGGCAAGTACCTTGCACGATGCCTTACCAATAC
AAGTAGTGGCGCAAGCATTCCTATGCAGCATGAATTGAATAACTTTGTAT
CTTTCTTTGCTTGCTTTTCATCATGCAGTTGATTCCAATGAAAAGAGATG
ACTTTGATGATGTCCATTCATTGTTTATCCGCAACAGCAACACCAAGCAG
CAGCTTCAATACTAATATGAATGCCGCAATTGAAATGATTTTGTATACAA
GGGTTAACAGCAAATGCCAGAAATAGTGCCTTCATCATATCTTGAAGTTG
TGAAACTCGTGCATTGCATGCCTTTGCTCTTTTTACCGCGCGGAGCAGGT
TTACCAACAGCTTTCTTCTTGCCCAATCGACCTTTTCATGACATGTGATC
AGGAGTTTGTTGCTTTACAAACAAACTGAACGAGCACTTTTCAGTATCTG
ATGATAATGATAGCTGGACGTGCACTTCAAGTTCTTGGAGTATGTGTACG
GGCGTAATCACTTTCTGGAGCTGCTGCTGGAGGACAAAAAACGTTGTGAG
CCTTGTGGGCATTAGAAGTCATGGCAAATACGTGTGCGTAATCAATCTCA
TAAATTATTGTAAATGAGAATCAATTTGCATTTGGCGCCTGAACTCGTGG
CCAGGATTGTCATGTCTTGTGGTTCGTTGTCATCATGCGACACTTTGTTG
CGTCACCTGCCTGTCACCTGCCTGTGCTCACTGTATGGATTGCAGGACTG
CACTTTTGGAACGAACAAATATGGGCTGGCGCTGAGCATCATCGTTGGGG
TCAATGGTGACAGCAAGTAAGTGTGTTCTTTCAAATTATTTGCATGCACC
TATATGGACAAGATGTGATGTAATCTGTGCTTTGGTCATATTGTACAGGG
CTTTGTGTCATGCTGTGCAATTACAGGCTGCATCACCTATCATGTTCATG
TTCACCGGTGCTGATCAAGATACAATTCTTTGTGCTTGTCTGCGTGTTTC
CAGGACGCGAATGTTTTGCCAGGCGCTGCTGGAACGTGAGGACACGGAGG
CGTTTTCGTGGTTCTTTGTCCACTATGTGAAGATGGTCGGCGGCCACTAT
CCGTCCGTATGTTTCACAGACAGGTACGCCAATTTCAGGTGATACTGAAA
TTTAGTAGAGTGGGACGAGCACCTCTGCTGCTTCAGCAATTACCCTCTCT
ATACTGTGCCCAGCAATGATGTTGCGATAACTGTGTCATTGCTGGATTTT
GTGTTCGGTTGCAGAGATGCGGCAGCGGAGGCAGCCATGACCTTGGCTTG
GCCTGGCACTGTCCATCTTATCTGCGAATGGCACTTCTTCAAGAACATCA
AGGAGATGCTGAAGGGGAAGCTGGGGGATGCTTGGCAGGCAAGTCAGCAT
TCGTTCAAGTCCATGTCTGTTATTGGCAAGGTTATCAAGTCGAGCCATAG
GTGTGAAAGCTCAAGCATGTGAACGGAATCAACAGTGTAAGTATGCTGGA
TACAAACTTTACCAAGAAGCTAGGCACATCGCAGCACAGGAGGTGCGCAG
ATGTCTTGTGTCATATGTTGCCCTGTCTGACTAGGTCCACCTCGATTATT
GTGCGTGTAGGTTGTGCCTGCACATTGATGTGGGTCGCTTGCACGCCATG
TGTACAGTCGCTCAATCAAATACCATGTGCGTCTGCGGTGGAGGTTTCAA
TGTGCAATGCAGAGCGAGTAGGTGTTATCATTATGTACAGAAGATGATCT
CTGTGCCAAACGTATCGACACTGCGCTTGTAGGTTTCTCAAGGTACGGTT
TTGAGGCCTCTGCCAAGCATGATTAGCAAAGCAGCACAGCCATACCACAA
AGCACGCGTCCATGAAGAAGTGTCCTGCAGAAGATGTGATGCAGTCCACT
AGCATGGTCTGTGCGGACAAAGCAGTAGCGCCTTTCTGTAGCAGTTGTGA
AGAAGCTGGCATGTGTCAGCCAAGCTGCTTGTGCACCTTTGCATTGCCAA
TGTGTATGTACGTAGTAGTAAAGTCTTCAAGCTCGCAGGACTGACGAAGA
AAGCTATGCTCATGCACACATGCTCACAGTTATGACGGAGCTGGAATAAG
AGCGGCGTGGTGGGCTTGTGTGCTATCGTCCACCTTGCAATGTCACAAAA
GCTTTCAGTGTGGGCTGCGGCGCTTGCACACAGGCATACATCACACCATT
TGCAGCTTTCATCAAGCAAACAAGGCGGGACAGCACATAGTGCATGCACG
CATAAAATGCCAGGTTGACTTGTGCATGCTGCATGCAGTAAGTAGTATGC
TGAAAATGCGGTGTCACCAAACCAACAACAATAGTTACCTGCAGGCCTCG
CTCAGCCCAAACGCAAGCTTGCAGTGCAAATGAATTCAAGGCACTTGTGC
TATAGGGAAGATCACTCTGTCAGTCTGAGTTTATTGAAGTTGAGTACTAT
TATGGTATTGGCCTGTCTCATCCGCTTCGGTCAATCACTCGTTGGTCGAA
TCTAGTTCAACTGCAATTGTGAATGTTCTGCAGTGATATTGGAGTTGAGG
TAACTTGAGATTAACAAAGAAATGGCGCAAGTAAAGTAAGATATCACACA
AGCAACCCGTTAGGCGCAAATATGGGGTGCAATCACACAAAAATGCATAT
TTGGGATTACTCAACCACCCAGATATAATAATACATACATGCCATACATG
CTTGAAGACATACTACAGGATTGATATCAACTTCAACGTTGCAGTAGTCA
GCAGGTGACAACGGGCGACATGTGACATTACCTAGCTTCAATGATACTTG
GCATTAGGGACCGTACATAAAGCAATGGTCTAGGTCGCATTTGCGCTTTC
AGGGTGCGCAATTGGTCTGACTGAGGCCTCTTCCTTGATGTTCGCAGATG
TTCAGGAGCCTTATGCAGCGCGCATCGCGTGCTCCTACGGAAGCCAGTTT
TCAGGGGGCGCGGAAGGGACTGTTGGACGCCCTAGTGGATGCTGGCGCCA
GCGATGACGATGTCATGAAGTACCTCAACGACACGATCTACCCCATCCGG
GAGCGCTGGGCATTCTGCTATCGCCTTGGCGTCCTCACCCTCGGCATCAA
CTCTACTCAACGTTGCGAGGGGTACTTTGGCATCCTGAAAGCGGAACTGT
TGAAGGTCACCACGCTCTGCCACCTGAAGCAAACGCTTGAAAATATCACT
GCCAGGTAAGAAACCGGCTCCTACAAGCGGATAATCATCTGCCTTCCTCA
GGGTGTTGCTGCACGCGTTGGTCATGGCCAGATATCACAGTGCACTGTGC
TCAGTGACTACAGTTTAAAATGTTTGTATACGCGATGCTCTTTTGTGGAT
CAGGCCGATGCTAGTGAAATCCAAAATCTCATGACATGTCATATCTGTTT
CATTTGCATGTGTCCTTTGATTACCTGTACAGAAGTGGTTTGACTCCGCT
CACTTCGATGCCTTTGTCGCTCTAGGTACACCTCGGAAGATCATCTGTAC
ATGGAGGCCACCGTTCGCACGGCTGCTTATGACGTAGCTCTGGAGGGCAT
GGACTCCTGTCTGCAAGCCATATACCGCAACCTACTGCTTGTGGCGCGGC
AAGACGGCACCTACCACTGCTTCAAGTCTCTTGTGAGCCAAGTGCGGTCT
GCAGATCGGTACTCTGTCAGGACGTGTGCACGGGAGAGCGTGCTGACCGT
GAACAGCGATGCTG
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Coding sequence (CDS) from alignment at Contig_516:510..5523+

>mRNA_19030 ID=mRNA_19030|Name=jgi.p|Trimin1|354733|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=720bp|location=Sequence derived from alignment at Contig_516:510..5523+ (Tribonema minus UTEX_B_3156 )
ATGGACTGCCCTGAGCCTGTCAACGAGCCCTTGGAGGGGCAGGACCAGGT
TGAGAGGGCGATGGAGTTTGGCTTGGATGTCATTCAACAGGCGCTGCTGG
AACGTGAGGACACGGAGGCGTTTTCGTGGTTCTTTGTCCACTATGTGAAG
ATGGTCGGCGGCCACTATCCGTCCATGTTCAGGAGCCTTATGCAGCGCGC
ATCGCGTGCTCCTACGGAAGCCAGTTTTCAGGGGGCGCGGAAGGGACTGT
TGGACGCCCTAGTGGATGCTGGCGCCAGCGATGACGATGTCATGAAGTAC
CTCAACGACACGATCTACCCCATCCGGGAGCGCTGGGCATTCTGCTATCG
CCTTGGCGTCCTCACCCTCGGCATCAACTCTACTCAACGTTGCGAGGGGT
ACTTTGGCATCCTGAAAGCGGAACTGTTGAAGGTCACCACGCTCTGCCAC
CTGAAGCAAACGCTTGAAAATATCACTGCCAGGTACACCTCGGAAGATCA
TCTGTACATGGAGGCCACCGTTCGCACGGCTGCTTATGACGTAGCTCTGG
AGGGCATGGACTCCTGTCTGCAAGCCATATACCGCAACCTACTGCTTGTG
GCGCGGCAAGACGGCACCTACCACTGCTTCAAGTCTCTTGTGAGCCAAGT
GCGGTCTGCAGATCGGTACTCTGTCAGGACGTGTGCACGGGAGAGCGTGC
TGACCGTGAACAGCGATGCT
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