mRNA_18908 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|182487
Unique NamemRNA_18908
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Match: A0A1C2E930_9HYPH (Oxidoreductase n=6 Tax=cellular organisms TaxID=131567 RepID=A0A1C2E930_9HYPH)

HSP 1 Score: 600 bits (1546), Expect = 5.390e-216
Identity = 289/316 (91.46%), Postives = 305/316 (96.52%), Query Frame = 1
Query:    1 MKPRIAVLGCGYWGSNHIRTLKGLGALHAVSDANFARAEGFASEQDCLAIAPDDLFKRDDVDAIVMALPPQFHADLSIRAVEAGKDVLVEKPIALTVPDAERSVQAAKDNHRVFMVGHVLRFHPAFEKLKALVDAGELGEIRYIHSHRLGLGKFHTENDALWDLAPHDLSMILALTGTEPLEVRGEGAALLDHLSDFAHLHMRFPNNLRSHLFASRLNPYRERRLTVVGARAMAVFDDVEPWERKLAVYHHAVWQDSGQWAATSNEPTYIEVEQGMPLTRELQHFLECIETRAEPRTDGEEAIRVLRILTAGTVTH 948
            MKPRIAVLGCGYWGSNHIRTLKGLGALHAVSD N ARAEGFASEQDCLAIAPDDLF RDDVDAIVMALPPQFHA+LSIRAVEAGKDVLVEKPIALTVPDAER+VQAAKDNHRVFMVGHVLRFHPAFEKLKALVD GELG+IRYIHSHRLGLGKFHTENDALWDLAPHDLSMILA+TGT PLEVRGEGAALLDHLSDFAH+HMRFPN+LRSHLFASRLNPYRERRLTVVG +AMAVFDDVEPWERKLAVY H+VWQDSGQWA T NEP+Y+E+EQGMPLTREL+HF+ CIETR+EPRT+GEEAI+VLRILTAGTV H
Sbjct:    1 MKPRIAVLGCGYWGSNHIRTLKGLGALHAVSDLNLARAEGFASEQDCLAIAPDDLFSRDDVDAIVMALPPQFHANLSIRAVEAGKDVLVEKPIALTVPDAERAVQAAKDNHRVFMVGHVLRFHPAFEKLKALVDEGELGDIRYIHSHRLGLGKFHTENDALWDLAPHDLSMILAITGTAPLEVRGEGAALLDHLSDFAHVHMRFPNDLRSHLFASRLNPYRERRLTVVGTKAMAVFDDVEPWERKLAVYRHSVWQDSGQWAFTMNEPSYVEIEQGMPLTRELEHFIHCIETRSEPRTNGEEAIQVLRILTAGTVVH 316          
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Match: A0A0Q7WIP3_9HYPH (Oxidoreductase n=1 Tax=Mesorhizobium sp. Root554 TaxID=1736557 RepID=A0A0Q7WIP3_9HYPH)

HSP 1 Score: 587 bits (1513), Expect = 6.210e-211
Identity = 282/318 (88.68%), Postives = 298/318 (93.71%), Query Frame = 1
Query:    1 MKPRIAVLGCGYWGSNHIRTLKGLGALHAVSDANFARAEGFASEQDCLAIAPDDLFKRDDVDAIVMALPPQFHADLSIRAVEAGKDVLVEKPIALTVPDAERSVQAAKDNHRVFMVGHVLRFHPAFEKLKALVDAGELGEIRYIHSHRLGLGKFHTENDALWDLAPHDLSMILALTGTEPLEVRGEGAALLDHLSDFAHLHMRFPNNLRSHLFASRLNPYRERRLTVVGARAMAVFDDVEPWERKLAVYHHAVWQDSGQWAATSNEPTYIEVEQGMPLTRELQHFLECIETRAEPRTDGEEAIRVLRILTAGTVTHGR 954
            MKPRIAVLGCGYWGSNHIRTLKGLGALHAVSD NFARAEGFASEQDCLAI P+ LF RDD+DAIVMALPPQFHAD+++RAV  GKDVLVEKPIALTVPDAER+VQAAKDN RVFMVGHVLRFHPAFEKLK+LVD GELG +RYIHSHRLGLGKFHTENDALWDLAPHDLSMILA+TGTEP+EVRGEGAALLDHLSDFAHLHMRFPN LR HLFASRLNPYRERRLTVVG +AMAVFDDVEPWERKLAVY HAVWQDSG WA T+NEP Y+ V  GMPLTREL+HF++CIETRAEPRTDGEEAIRVLRILTAGTVTH R
Sbjct:    1 MKPRIAVLGCGYWGSNHIRTLKGLGALHAVSDVNFARAEGFASEQDCLAIEPEQLFARDDIDAIVMALPPQFHADMAVRAVTNGKDVLVEKPIALTVPDAERAVQAAKDNGRVFMVGHVLRFHPAFEKLKSLVDEGELGTVRYIHSHRLGLGKFHTENDALWDLAPHDLSMILAITGTEPVEVRGEGAALLDHLSDFAHLHMRFPNGLRGHLFASRLNPYRERRLTVVGEKAMAVFDDVEPWERKLAVYRHAVWQDSGHWAFTANEPAYVPVSNGMPLTRELEHFIQCIETRAEPRTDGEEAIRVLRILTAGTVTHDR 318          
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Match: A0A1V8RNF1_9HYPH (Oxidoreductase n=1 Tax=Pseudaminobacter manganicus TaxID=1873176 RepID=A0A1V8RNF1_9HYPH)

HSP 1 Score: 584 bits (1505), Expect = 1.280e-209
Identity = 280/318 (88.05%), Postives = 300/318 (94.34%), Query Frame = 1
Query:    1 MKPRIAVLGCGYWGSNHIRTLKGLGALHAVSDANFARAEGFASEQDCLAIAPDDLFKRDDVDAIVMALPPQFHADLSIRAVEAGKDVLVEKPIALTVPDAERSVQAAKDNHRVFMVGHVLRFHPAFEKLKALVDAGELGEIRYIHSHRLGLGKFHTENDALWDLAPHDLSMILALTGTEPLEVRGEGAALLDHLSDFAHLHMRFPNNLRSHLFASRLNPYRERRLTVVGARAMAVFDDVEPWERKLAVYHHAVWQDSGQWAATSNEPTYIEVEQGMPLTRELQHFLECIETRAEPRTDGEEAIRVLRILTAGTVTHGR 954
            MKPRIAVLGCGYWGSNHIRTLKGLGALHAVSDAN ARAEGFASEQ+CLAIAPDDLF RDDVDAIVMALPPQFHA  ++RAVEAGKDVLVEKP+ALTVPDAER+V AAK + RVFMVGHVLRFHPAFEK+KAL+DAGELGE+RY+HSHRLGLGKFHTENDALWDLAPHDLSMILA+TG EP+EV+GEGAA+LDHLSDFAHLHM FPN LRSHLFASRLNPYRERRLTVVG +AMAVFDDVEPWERKLAVY HAVWQDSG WA T+NEPTY+ VEQGMPLTREL+HF+ CIETR EPRTDGEEAIRVLRILTAGTV+H R
Sbjct:    1 MKPRIAVLGCGYWGSNHIRTLKGLGALHAVSDANLARAEGFASEQECLAIAPDDLFARDDVDAIVMALPPQFHAATAVRAVEAGKDVLVEKPVALTVPDAERAVAAAKASRRVFMVGHVLRFHPAFEKMKALIDAGELGEVRYVHSHRLGLGKFHTENDALWDLAPHDLSMILAITGAEPVEVKGEGAAVLDHLSDFAHLHMLFPNGLRSHLFASRLNPYRERRLTVVGNKAMAVFDDVEPWERKLAVYRHAVWQDSGHWAFTTNEPTYVAVEQGMPLTRELEHFIHCIETREEPRTDGEEAIRVLRILTAGTVSHDR 318          
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Match: A0A0Q8AXV8_9HYPH (Oxidoreductase n=3 Tax=unclassified Mesorhizobium TaxID=325217 RepID=A0A0Q8AXV8_9HYPH)

HSP 1 Score: 579 bits (1493), Expect = 6.440e-208
Identity = 278/317 (87.70%), Postives = 297/317 (93.69%), Query Frame = 1
Query:    1 MKPRIAVLGCGYWGSNHIRTLKGLGALHAVSDANFARAEGFASEQDCLAIAPDDLFKRDDVDAIVMALPPQFHADLSIRAVEAGKDVLVEKPIALTVPDAERSVQAAKDNHRVFMVGHVLRFHPAFEKLKALVDAGELGEIRYIHSHRLGLGKFHTENDALWDLAPHDLSMILALTGTEPLEVRGEGAALLDHLSDFAHLHMRFPNNLRSHLFASRLNPYRERRLTVVGARAMAVFDDVEPWERKLAVYHHAVWQDSGQWAATSNEPTYIEVEQGMPLTRELQHFLECIETRAEPRTDGEEAIRVLRILTAGTVTHG 951
            MKPRIAVLGCGYWGSNHIRTLK LGALHAVSDAN ARAEGFASEQ+CLAI P+ L KRDDVDAIVMALPPQFHA+ +IRAV+AGKDVLVEKP+ALTV DAERSVQAAKDN R+FMVGHVLRFHPAFEKLK LVD GELGE+RYIHSHRLGLGKFHTENDALWDLAPHDLSMILA+TG EP+EV GEGAA LDHLSDFAHLHMRFP NLR HLFASRLNPYRERRLTVVG +AMAVFDDVEPWERKLAVYHHAVWQDSG WA T++EP+Y+ V QGMPLTREL+HF++CIETRAEPRTDGEEAIRVLR+LTAGTVTHG
Sbjct:    1 MKPRIAVLGCGYWGSNHIRTLKALGALHAVSDANGARAEGFASEQECLAIEPEALLKRDDVDAIVMALPPQFHAETAIRAVQAGKDVLVEKPVALTVADAERSVQAAKDNKRIFMVGHVLRFHPAFEKLKTLVDEGELGEVRYIHSHRLGLGKFHTENDALWDLAPHDLSMILAITGAEPVEVHGEGAATLDHLSDFAHLHMRFPGNLRGHLFASRLNPYRERRLTVVGTKAMAVFDDVEPWERKLAVYHHAVWQDSGHWAFTADEPSYVPVGQGMPLTRELEHFIQCIETRAEPRTDGEEAIRVLRVLTAGTVTHG 317          
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Match: A0A7R7HBG0_9HYPH (Oxidoreductase n=2 Tax=unclassified Mesorhizobium TaxID=325217 RepID=A0A7R7HBG0_9HYPH)

HSP 1 Score: 571 bits (1472), Expect = 8.800e-205
Identity = 274/316 (86.71%), Postives = 294/316 (93.04%), Query Frame = 1
Query:    1 MKPRIAVLGCGYWGSNHIRTLKGLGALHAVSDANFARAEGFASEQDCLAIAPDDLFKRDDVDAIVMALPPQFHADLSIRAVEAGKDVLVEKPIALTVPDAERSVQAAKDNHRVFMVGHVLRFHPAFEKLKALVDAGELGEIRYIHSHRLGLGKFHTENDALWDLAPHDLSMILALTGTEPLEVRGEGAALLDHLSDFAHLHMRFPNNLRSHLFASRLNPYRERRLTVVGARAMAVFDDVEPWERKLAVYHHAVWQDSGQWAATSNEPTYIEVEQGMPLTRELQHFLECIETRAEPRTDGEEAIRVLRILTAGTVTH 948
            MK RIAVLGCGYWGSNHIRTLK LGAL+AVSDAN ARAEGFASEQ+CLAIAPD+L +RDDVDAIV+ALPPQFHA+ +I AVE GKDVLVEKPIALTV DAERSV AA+ NHRVFMVGHVLRFHPAFEKLK L+D GELGE+RY+HSHRLGLGKFHTENDALWDLAPHDLSMILA+TGT P+E+RGEGAALLDHLSDFAHLHMRFPN +R HLFASRLNPYRERRLTVVG +AMAVFDDVEPWERKLAVY H VWQDSGQWA T NEP+Y+ VEQGMPLTRELQHFLECIETRAEPRTDGEEAIRVL+ILTAGT+ H
Sbjct:    1 MKARIAVLGCGYWGSNHIRTLKSLGALYAVSDANGARAEGFASEQECLAIAPDELIRRDDVDAIVLALPPQFHAEFAIAAVEHGKDVLVEKPIALTVADAERSVAAARTNHRVFMVGHVLRFHPAFEKLKELIDQGELGEVRYVHSHRLGLGKFHTENDALWDLAPHDLSMILAITGTAPVEIRGEGAALLDHLSDFAHLHMRFPNGMRGHLFASRLNPYRERRLTVVGTKAMAVFDDVEPWERKLAVYRHEVWQDSGQWAFTQNEPSYVPVEQGMPLTRELQHFLECIETRAEPRTDGEEAIRVLQILTAGTIVH 316          
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Match: A0A7V7BZW6_9HYPH (Gfo/Idh/MocA family oxidoreductase n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A7V7BZW6_9HYPH)

HSP 1 Score: 571 bits (1472), Expect = 8.800e-205
Identity = 277/316 (87.66%), Postives = 291/316 (92.09%), Query Frame = 1
Query:    1 MKPRIAVLGCGYWGSNHIRTLKGLGALHAVSDANFARAEGFASEQDCLAIAPDDLFKRDDVDAIVMALPPQFHADLSIRAVEAGKDVLVEKPIALTVPDAERSVQAAKDNHRVFMVGHVLRFHPAFEKLKALVDAGELGEIRYIHSHRLGLGKFHTENDALWDLAPHDLSMILALTGTEPLEVRGEGAALLDHLSDFAHLHMRFPNNLRSHLFASRLNPYRERRLTVVGARAMAVFDDVEPWERKLAVYHHAVWQDSGQWAATSNEPTYIEVEQGMPLTRELQHFLECIETRAEPRTDGEEAIRVLRILTAGTVTH 948
            MKPRIAVLGCGYWGSNHIRTLK LGALHAVSDAN ARAEGFASEQDCLAIAPD+L  R DVDA+VMALPPQFHAD +IRAVEAGKDVLVEKPIAL V DAER+V AAK N RVFMVGHVLRFHPAFE LK L+D GELG++RYIHSHRLGLGKFHTENDALWDLAPHDLSMILA+TG  P+EVRGEGAALLDHLSDFAHLHMRFPN LRSHLFASRLNPYRERRLTVVG RAMAVFDDVEPWERKLAVY HAVWQDSGQWA T NEP+Y+ VEQGMPLTRELQHF+ C+ +RAEPRTDGEEAIRVLRILTAGTV H
Sbjct:    1 MKPRIAVLGCGYWGSNHIRTLKALGALHAVSDANAARAEGFASEQDCLAIAPDELMGRHDVDAVVMALPPQFHADFAIRAVEAGKDVLVEKPIALNVADAERAVAAAKSNRRVFMVGHVLRFHPAFEALKDLIDRGELGQVRYIHSHRLGLGKFHTENDALWDLAPHDLSMILAITGAAPVEVRGEGAALLDHLSDFAHLHMRFPNGLRSHLFASRLNPYRERRLTVVGTRAMAVFDDVEPWERKLAVYRHAVWQDSGQWAFTQNEPSYVPVEQGMPLTRELQHFIACVGSRAEPRTDGEEAIRVLRILTAGTVAH 316          
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Match: A0A442RBV0_9HYPH (Gfo/Idh/MocA family oxidoreductase n=379 Tax=Bacteria TaxID=2 RepID=A0A442RBV0_9HYPH)

HSP 1 Score: 569 bits (1466), Expect = 1.400e-203
Identity = 274/316 (86.71%), Postives = 296/316 (93.67%), Query Frame = 1
Query:    1 MKPRIAVLGCGYWGSNHIRTLKGLGALHAVSDANFARAEGFASEQDCLAIAPDDLFKRDDVDAIVMALPPQFHADLSIRAVEAGKDVLVEKPIALTVPDAERSVQAAKDNHRVFMVGHVLRFHPAFEKLKALVDAGELGEIRYIHSHRLGLGKFHTENDALWDLAPHDLSMILALTGTEPLEVRGEGAALLDHLSDFAHLHMRFPNNLRSHLFASRLNPYRERRLTVVGARAMAVFDDVEPWERKLAVYHHAVWQDSGQWAATSNEPTYIEVEQGMPLTRELQHFLECIETRAEPRTDGEEAIRVLRILTAGTVTH 948
            MKPRIAVLGCGYWGSNHIRTLK LGAL+AVSD N ARAEGFASEQDCLAI P+ LF R D+DAIVMALPPQFHAD+++RAV+ GKDVLVEKPIALTV DAERSV+AA DN RVFMVGHVLRFHPAFE LKAL+D GELGE+RYIHSHRLGLGKFHTENDALWDLAPHDLSMILA+TGTEP+EVRGEGAALLD+LSDFAHLHMRFPN LRSHLFASRLNPYRERRLTVVG +AMAVFDDVEPWERKLAVY HAVWQDSGQWA T+NEP+Y+ V +GMPLTREL+HF++CIETRAEPRT GEEAIRVLRILTAGT+TH
Sbjct:    1 MKPRIAVLGCGYWGSNHIRTLKALGALYAVSDVNPARAEGFASEQDCLAIEPEALFARKDIDAIVMALPPQFHADMAVRAVQGGKDVLVEKPIALTVTDAERSVKAAADNGRVFMVGHVLRFHPAFETLKALIDNGELGEVRYIHSHRLGLGKFHTENDALWDLAPHDLSMILAITGTEPIEVRGEGAALLDNLSDFAHLHMRFPNGLRSHLFASRLNPYRERRLTVVGTKAMAVFDDVEPWERKLAVYRHAVWQDSGQWAFTTNEPSYVAVGEGMPLTRELEHFIQCIETRAEPRTGGEEAIRVLRILTAGTITH 316          
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Match: A0A5B8B2V1_9HYPH (Gfo/Idh/MocA family oxidoreductase n=2 Tax=Mesorhizobium TaxID=68287 RepID=A0A5B8B2V1_9HYPH)

HSP 1 Score: 567 bits (1462), Expect = 4.090e-203
Identity = 274/318 (86.16%), Postives = 292/318 (91.82%), Query Frame = 1
Query:    1 MKPRIAVLGCGYWGSNHIRTLKGLGALHAVSDANFARAEGFASEQDCLAIAPDDLFKRDDVDAIVMALPPQFHADLSIRAVEAGKDVLVEKPIALTVPDAERSVQAAKDNHRVFMVGHVLRFHPAFEKLKALVDAGELGEIRYIHSHRLGLGKFHTENDALWDLAPHDLSMILALTGTEPLEVRGEGAALLDHLSDFAHLHMRFPNNLRSHLFASRLNPYRERRLTVVGARAMAVFDDVEPWERKLAVYHHAVWQDSGQWAATSNEPTYIEVEQGMPLTRELQHFLECIETRAEPRTDGEEAIRVLRILTAGTVTHGR 954
            MKPR+AVLGCGYWGSNHIRTLKGLG LHAVSD N ARAEGFASEQDCLAI P+ LF RDDVDAIV+ALPPQFHA ++ RAV+AGKDVLVEKP+ALTV DAER+V AAK   R+FMVGHVLRFHPAFEKLK+LVDAGELGE+RYIHSHRLGLGKFHTENDALWDLAPHDLSMILA+TGTEP+EVRGEGAALLDHLSDFAHLHM FPNNLR HLF SRLNPYRERRLTVVG +AMAVFDDVEPWERKLAVY HAVWQDSG WA T+NEP+Y+ VEQGMPLTREL+HFLECI TR EP TDGEEAIRVLRILTAGTV H R
Sbjct:    1 MKPRLAVLGCGYWGSNHIRTLKGLGVLHAVSDLNKARAEGFASEQDCLAIEPEALFSRDDVDAIVLALPPQFHAQMATRAVQAGKDVLVEKPVALTVADAERAVAAAKAAGRIFMVGHVLRFHPAFEKLKSLVDAGELGEVRYIHSHRLGLGKFHTENDALWDLAPHDLSMILAITGTEPIEVRGEGAALLDHLSDFAHLHMVFPNNLRGHLFTSRLNPYRERRLTVVGTKAMAVFDDVEPWERKLAVYRHAVWQDSGHWAFTANEPSYVTVEQGMPLTRELEHFLECIRTRREPATDGEEAIRVLRILTAGTVPHDR 318          
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Match: A0A1I7EE57_9HYPH (Predicted dehydrogenase n=3 Tax=Mesorhizobium TaxID=68287 RepID=A0A1I7EE57_9HYPH)

HSP 1 Score: 566 bits (1460), Expect = 5.930e-203
Identity = 274/317 (86.44%), Postives = 290/317 (91.48%), Query Frame = 1
Query:    1 MKPRIAVLGCGYWGSNHIRTLKGLGALHAVSDANFARAEGFASEQDCLAIAPDDLFKRDDVDAIVMALPPQFHADLSIRAVEAGKDVLVEKPIALTVPDAERSVQAAKDNHRVFMVGHVLRFHPAFEKLKALVDAGELGEIRYIHSHRLGLGKFHTENDALWDLAPHDLSMILALTGTEPLEVRGEGAALLDHLSDFAHLHMRFPNNLRSHLFASRLNPYRERRLTVVGARAMAVFDDVEPWERKLAVYHHAVWQDSGQWAATSNEPTYIEVEQGMPLTRELQHFLECIETRAEPRTDGEEAIRVLRILTAGTVTHG 951
            MKPRIAVLGCGYWG+NHIRTLKGLG LHAVSDAN ARAEGFASEQDCLAI PD LF R D+DAIVMALPPQFHA+ +I+AVE GKDVLVEKPIALTVPDAER+V AAK N R+FM GHVLRFHPAFEKLK L+D GELGE++YIHSHRLGLGKFHTENDALWDLAPHDLSMILA+TG+ P E+RGEGAALLDH SDFAHLHMRFPN LRSHLF SRLNPYRERRLTVVG RAMAVFDDVEPWERKLAVY HAVWQDSGQWA T+NEPTYI VE GMPLTREL+HFL CI+TRAEPRT GEEAI VLRILTAGTVTHG
Sbjct:    1 MKPRIAVLGCGYWGANHIRTLKGLGVLHAVSDANKARAEGFASEQDCLAIEPDALFTRKDIDAIVMALPPQFHAEAAIKAVENGKDVLVEKPIALTVPDAERAVAAAKANKRIFMTGHVLRFHPAFEKLKELIDNGELGEVKYIHSHRLGLGKFHTENDALWDLAPHDLSMILAITGSAPTEIRGEGAALLDHQSDFAHLHMRFPNGLRSHLFTSRLNPYRERRLTVVGTRAMAVFDDVEPWERKLAVYRHAVWQDSGQWAFTANEPTYIPVEGGMPLTRELEHFLSCIQTRAEPRTSGEEAITVLRILTAGTVTHG 317          
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Match: A0A432V057_9HYPH (Gfo/Idh/MocA family oxidoreductase n=1 Tax=Pseudaminobacter arsenicus TaxID=1851146 RepID=A0A432V057_9HYPH)

HSP 1 Score: 564 bits (1454), Expect = 4.860e-202
Identity = 269/317 (84.86%), Postives = 296/317 (93.38%), Query Frame = 1
Query:    1 MKPRIAVLGCGYWGSNHIRTLKGLGALHAVSDANFARAEGFASEQDCLAIAPDDLFKRDDVDAIVMALPPQFHADLSIRAVEAGKDVLVEKPIALTVPDAERSVQAAKDNHRVFMVGHVLRFHPAFEKLKALVDAGELGEIRYIHSHRLGLGKFHTENDALWDLAPHDLSMILALTGTEPLEVRGEGAALLDHLSDFAHLHMRFPNNLRSHLFASRLNPYRERRLTVVGARAMAVFDDVEPWERKLAVYHHAVWQDSGQWAATSNEPTYIEVEQGMPLTRELQHFLECIETRAEPRTDGEEAIRVLRILTAGTVTHG 951
            MKPRIAVLGCGYWGSNHIRTLK LGALHAVSDAN ARAEGFASEQDCLAI P++LF RDDVDAIVMALPPQFH++ +I+AVEAGKDVLVEKP+ALTV DAER+V AA+ N R+FMVGHVLRFHPAFEKLKAL+D+GELGE++Y+H+HRLGLGKFHTENDALWDLAPHDLSMILA+TG+ P+EVRGEGAA+LDH+SDFA +HMRF N LR HLFASRLNPYRERRLTVVG RAMAVFDDVEPWERKLAVY HAVWQDSGQWA T+NEPTY++VE+GMPLTREL+HFL CI TRA PRTDGEEAI VLRILTAGTVTHG
Sbjct:    1 MKPRIAVLGCGYWGSNHIRTLKALGALHAVSDANRARAEGFASEQDCLAIDPEELFSRDDVDAIVMALPPQFHSETAIKAVEAGKDVLVEKPVALTVADAERAVAAAEANKRIFMVGHVLRFHPAFEKLKALIDSGELGEVKYVHAHRLGLGKFHTENDALWDLAPHDLSMILAITGSAPVEVRGEGAAILDHMSDFALVHMRFANGLRGHLFASRLNPYRERRLTVVGTRAMAVFDDVEPWERKLAVYRHAVWQDSGQWAFTANEPTYVQVEEGMPLTRELEHFLSCIRTRAAPRTDGEEAITVLRILTAGTVTHG 317          
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Match: A0A835YUX5_9STRA (Seven in absentia n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUX5_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.890e-52
Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1
Query:    1 VCYGTSTPPILQCGQGHVVCSTCLPRITSCPVCRGSVTCRNLALEALCEGHQFPCPHSTHGCTRQLELRDLRY 219
            VCYGTSTPPILQCGQGHVVCSTCLPRITSCPVCRGSVTCRNLALEALCEGHQFPCPHSTHGCTRQLELRDLRY
Sbjct:    1 VCYGTSTPPILQCGQGHVVCSTCLPRITSCPVCRGSVTCRNLALEALCEGHQFPCPHSTHGCTRQLELRDLRY 73          
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Match: A0A1B6L0X8_9HEMI (E3 ubiquitin-protein ligase n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6L0X8_9HEMI)

HSP 1 Score: 79.0 bits (193), Expect = 1.340e-16
Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 1
Query:    1 VCYGTSTPPILQCGQGHVVCSTCLPRITSCPVCRGSV-TCRNLALEALCEGHQFPCPHSTHGCTRQL 198
            VC+    PPILQC  GH+VCS+C P++T CP CRG +   RNLA+E +     FPC +ST GCT  L
Sbjct:   61 VCFDYVLPPILQCQSGHLVCSSCRPKLTCCPTCRGPLGNIRNLAMEKVASTVLFPCKYSTSGCTMSL 127          
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Match: A0A6P4JWI7_DROBP (E3 ubiquitin-protein ligase n=2 Tax=Drosophila bipectinata TaxID=42026 RepID=A0A6P4JWI7_DROBP)

HSP 1 Score: 80.1 bits (196), Expect = 3.260e-16
Identity = 33/63 (52.38%), Postives = 47/63 (74.60%), Query Frame = 1
Query:    1 VCYGTSTPPILQCGQGHVVCSTCLPRITSCPVCRGSVT-CRNLALEALCEGHQFPCPHSTHGC 186
            VC+G   PPI+QC +GH++CSTC P++T+CPVCR +++  RNLA+E +     FPC HS+ GC
Sbjct:   69 VCFGYMMPPIMQCSRGHLICSTCRPKLTACPVCRVTMSNIRNLAMEKVASKLVFPCKHSSCGC 131          
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Match: A0A1B6KMN2_9HEMI (E3 ubiquitin-protein ligase n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6KMN2_9HEMI)

HSP 1 Score: 79.0 bits (193), Expect = 6.590e-16
Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 1
Query:    1 VCYGTSTPPILQCGQGHVVCSTCLPRITSCPVCRGSV-TCRNLALEALCEGHQFPCPHSTHGCTRQL 198
            VC+    PPILQC  GH+VCS+C P++T CP CRG +   RNLA+E +     FPC +ST GCT  L
Sbjct:   47 VCFDYVLPPILQCQSGHLVCSSCRPKLTCCPTCRGPLGNIRNLAMEKVASTVLFPCKYSTSGCTMSL 113          
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Match: UPI000BA7EC5E (E3 ubiquitin-protein ligase Siah1-like isoform X1 n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA7EC5E)

HSP 1 Score: 75.1 bits (183), Expect = 8.490e-16
Identity = 34/67 (50.75%), Postives = 41/67 (61.19%), Query Frame = 1
Query:    1 VCYGTSTPPILQCGQGHVVCSTCLPRITSCPVCRGSV-TCRNLALEALCEGHQFPCPHSTHGCTRQL 198
            VC+    PPILQC  GH+VCSTC  +IT CP CR  +   RNLA+E +     FPC +S  GC  QL
Sbjct:   36 VCFEFVLPPILQCQNGHLVCSTCRQKITCCPTCRAPIGNIRNLAMEKVASTVMFPCKYSASGCNAQL 102          
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Match: T1JGZ3_STRMM (E3 ubiquitin-protein ligase n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1JGZ3_STRMM)

HSP 1 Score: 78.2 bits (191), Expect = 1.030e-15
Identity = 34/67 (50.75%), Postives = 44/67 (65.67%), Query Frame = 1
Query:    1 VCYGTSTPPILQCGQGHVVCSTCLPRITSCPVCRGSV-TCRNLALEALCEGHQFPCPHSTHGCTRQL 198
            VC+    PPILQC  GH+VCSTC P++T CP CRG++   RNLA+E +     FPC +S+ GC   L
Sbjct:   29 VCFDYVLPPILQCQSGHLVCSTCRPKLTCCPTCRGALGNIRNLAMEKVASTVMFPCKYSSSGCAATL 95          
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Match: A0A7R9AAN3_9CRUS (E3 ubiquitin-protein ligase n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9AAN3_9CRUS)

HSP 1 Score: 77.8 bits (190), Expect = 1.610e-15
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 1
Query:    1 VCYGTSTPPILQCGQGHVVCSTCLPRITSCPVCRGSV-TCRNLALEALCEGHQFPCPHSTHGCTRQL 198
            VC+    PPILQC  GH+VC+TC P++T CP CRG +   RNLA+E +     FPC ++T GC+  L
Sbjct:   38 VCFDYVLPPILQCQSGHLVCTTCRPKLTCCPTCRGQLGNIRNLAMEKVASTVMFPCKYTTSGCSASL 104          
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Match: H9J043_BOMMO (E3 ubiquitin-protein ligase n=38 Tax=Ditrysia TaxID=37567 RepID=H9J043_BOMMO)

HSP 1 Score: 77.8 bits (190), Expect = 1.690e-15
Identity = 34/67 (50.75%), Postives = 43/67 (64.18%), Query Frame = 1
Query:    1 VCYGTSTPPILQCGQGHVVCSTCLPRITSCPVCRGSV-TCRNLALEALCEGHQFPCPHSTHGCTRQL 198
            VC+    PPILQC  GH+VCS+C P+++ CP CRG +   RNLA+E +     FPC HS  GCT  L
Sbjct:   42 VCFDYVLPPILQCQSGHLVCSSCRPKLSCCPTCRGPLGNIRNLAMEKVASNVMFPCKHSNTGCTVTL 108          
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Match: A0A7R9BUW8_9CRUS (E3 ubiquitin-protein ligase n=1 Tax=Notodromas monacha TaxID=399045 RepID=A0A7R9BUW8_9CRUS)

HSP 1 Score: 77.4 bits (189), Expect = 3.290e-15
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 1
Query:    1 VCYGTSTPPILQCGQGHVVCSTCLPRITSCPVCRGSV-TCRNLALEALCEGHQFPCPHSTHGCTRQL 198
            VC+    PPILQC  GH+VCSTC P++T CP CRG++   RNLA+E +     FPC +++ GC   L
Sbjct:   74 VCFDYVLPPILQCSSGHLVCSTCRPKLTCCPTCRGALGNIRNLAMEKVASTVMFPCKYASSGCNVSL 140          
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Match: A0A6M2D8H1_RHIMP (E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6M2D8H1_RHIMP)

HSP 1 Score: 75.1 bits (183), Expect = 5.210e-15
Identity = 33/71 (46.48%), Postives = 44/71 (61.97%), Query Frame = 1
Query:    1 VCYGTSTPPILQCGQGHVVCSTCLPRITSCPVCRGSVT-CRNLALEALCEGHQFPCPHSTHGCTRQLELRD 210
            VC  +  PPI+QC  GH+VCS+C P + +CP+CR  +   RNLALE + E  +FPC   + GCT  L   D
Sbjct:   20 VCLDSVLPPIVQCRNGHLVCSSCRPNVDTCPICREQLDDIRNLALEKIAEKVKFPCKFKSSGCTLMLSAAD 90          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|182487 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1C2E930_9HYPH5.390e-21691.46Oxidoreductase n=6 Tax=cellular organisms TaxID=13... [more]
A0A0Q7WIP3_9HYPH6.210e-21188.68Oxidoreductase n=1 Tax=Mesorhizobium sp. Root554 T... [more]
A0A1V8RNF1_9HYPH1.280e-20988.05Oxidoreductase n=1 Tax=Pseudaminobacter manganicus... [more]
A0A0Q8AXV8_9HYPH6.440e-20887.70Oxidoreductase n=3 Tax=unclassified Mesorhizobium ... [more]
A0A7R7HBG0_9HYPH8.800e-20586.71Oxidoreductase n=2 Tax=unclassified Mesorhizobium ... [more]
A0A7V7BZW6_9HYPH8.800e-20587.66Gfo/Idh/MocA family oxidoreductase n=2 Tax=Hyphomi... [more]
A0A442RBV0_9HYPH1.400e-20386.71Gfo/Idh/MocA family oxidoreductase n=379 Tax=Bacte... [more]
A0A5B8B2V1_9HYPH4.090e-20386.16Gfo/Idh/MocA family oxidoreductase n=2 Tax=Mesorhi... [more]
A0A1I7EE57_9HYPH5.930e-20386.44Predicted dehydrogenase n=3 Tax=Mesorhizobium TaxI... [more]
A0A432V057_9HYPH4.860e-20284.86Gfo/Idh/MocA family oxidoreductase n=1 Tax=Pseudam... [more]

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BLAST of jgi.p|Trimin1|182487 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YUX5_9STRA1.890e-52100.00Seven in absentia n=1 Tax=Tribonema minus TaxID=30... [more]
A0A1B6L0X8_9HEMI1.340e-1652.24E3 ubiquitin-protein ligase n=1 Tax=Graphocephala ... [more]
A0A6P4JWI7_DROBP3.260e-1652.38E3 ubiquitin-protein ligase n=2 Tax=Drosophila bip... [more]
A0A1B6KMN2_9HEMI6.590e-1652.24E3 ubiquitin-protein ligase n=1 Tax=Graphocephala ... [more]
UPI000BA7EC5E8.490e-1650.75E3 ubiquitin-protein ligase Siah1-like isoform X1 ... [more]
T1JGZ3_STRMM1.030e-1550.75E3 ubiquitin-protein ligase n=1 Tax=Strigamia mari... [more]
A0A7R9AAN3_9CRUS1.610e-1549.25E3 ubiquitin-protein ligase n=1 Tax=Darwinula stev... [more]
H9J043_BOMMO1.690e-1550.75E3 ubiquitin-protein ligase n=38 Tax=Ditrysia TaxI... [more]
A0A7R9BUW8_9CRUS3.290e-1549.25E3 ubiquitin-protein ligase n=1 Tax=Notodromas mon... [more]
A0A6M2D8H1_RHIMP5.210e-1546.48E3 ubiquitin-protein ligase (Fragment) n=1 Tax=Rhi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_557contigContig_557:206..1171 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|182487|e_gw1.557.1.1
DescriptionOxidoreductase family, NAD-binding Rossmann fold
COG categoryS
Max annot lvl28211|Alphaproteobacteria
EggNOG OGsCOG0673@1|root,COG0673@2|Bacteria,1QIKT@1224|Proteobacteria,2VEYF@28211|Alphaproteobacteria,43IFC@69277|Phyllobacteriaceae
Evalue8.84e-217
Seed ortholog1320556.AVBP01000001_gene4815
Hectar predicted targeting categoryother localisation
TranscriptId182809
TrackFilteredModels1
ProteinId182487
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|182487gene_18908Tribonema minus UTEX_B_3156 geneContig_557 206..1171 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18908_1exon_18908_1Tribonema minus UTEX_B_3156 exonContig_557 206..1171 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18908CDS_18908Tribonema minus UTEX_B_3156 CDSContig_557 206..1171 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|182487Trimin1|182487|e_gw1.557.1.1Tribonema minus UTEX_B_3156 polypeptideContig_557 206..1171 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18908 ID=mRNA_18908|Name=jgi.p|Trimin1|182487|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=966bp|location=Sequence derived from alignment at Contig_557:206..1171+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAAACCGCGTATAGCAGTCCTCGGATGCGGGTACTGGGGCAGCAACCA
TATCCGGACGCTGAAAGGGCTGGGCGCACTCCATGCGGTTTCAGATGCCA
ATTTCGCGCGTGCTGAAGGTTTTGCCAGCGAACAGGACTGCCTGGCCATC
GCGCCGGACGACCTCTTCAAGCGCGACGATGTCGACGCCATCGTCATGGC
GCTGCCGCCGCAGTTCCATGCCGATCTTTCGATCCGTGCCGTCGAGGCCG
GCAAGGACGTGCTGGTCGAGAAGCCGATCGCGTTGACGGTGCCGGATGCC
GAGCGCTCGGTTCAGGCGGCAAAGGACAATCACCGCGTCTTCATGGTTGG
CCATGTGCTGCGTTTCCATCCGGCTTTCGAGAAACTGAAGGCGCTGGTGG
ATGCCGGCGAACTCGGCGAAATCCGCTACATCCATTCACACCGTCTCGGC
CTTGGCAAATTCCACACCGAGAATGATGCGTTGTGGGATCTGGCGCCGCA
CGACCTGTCGATGATCCTGGCTCTTACCGGCACCGAACCGCTGGAAGTGC
GCGGCGAGGGGGCGGCGCTGCTCGACCATCTCAGTGATTTCGCGCATCTG
CACATGCGCTTCCCGAACAATCTGAGAAGCCACCTCTTTGCTTCGCGGCT
CAATCCCTATCGTGAGCGCCGCCTGACCGTGGTCGGCGCCAGGGCGATGG
CGGTTTTCGACGACGTCGAGCCTTGGGAAAGAAAGCTCGCGGTTTATCAT
CACGCCGTATGGCAGGACAGCGGTCAATGGGCCGCCACCAGCAACGAGCC
GACCTATATCGAGGTCGAGCAGGGAATGCCGCTGACGCGTGAGCTGCAGC
ACTTTCTGGAATGCATCGAAACGCGCGCCGAGCCCCGCACGGACGGCGAA
GAAGCGATCCGGGTGCTGCGTATCCTGACCGCGGGTACGGTCACCCACGG
CCGTATCGGCGGCTGA
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protein sequence of jgi.p|Trimin1|182487

>Trimin1|182487|e_gw1.557.1.1 ID=Trimin1|182487|e_gw1.557.1.1|Name=jgi.p|Trimin1|182487|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=322bp
MKPRIAVLGCGYWGSNHIRTLKGLGALHAVSDANFARAEGFASEQDCLAI
APDDLFKRDDVDAIVMALPPQFHADLSIRAVEAGKDVLVEKPIALTVPDA
ERSVQAAKDNHRVFMVGHVLRFHPAFEKLKALVDAGELGEIRYIHSHRLG
LGKFHTENDALWDLAPHDLSMILALTGTEPLEVRGEGAALLDHLSDFAHL
HMRFPNNLRSHLFASRLNPYRERRLTVVGARAMAVFDDVEPWERKLAVYH
HAVWQDSGQWAATSNEPTYIEVEQGMPLTRELQHFLECIETRAEPRTDGE
EAIRVLRILTAGTVTHGRIGG*
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mRNA from alignment at Contig_557:206..1171+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18908 ID=mRNA_18908|Name=jgi.p|Trimin1|182487|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=966bp|location=Sequence derived from alignment at Contig_557:206..1171+ (Tribonema minus UTEX_B_3156 )
ATGAAACCGCGTATAGCAGTCCTCGGATGCGGGTACTGGGGCAGCAACCA TATCCGGACGCTGAAAGGGCTGGGCGCACTCCATGCGGTTTCAGATGCCA ATTTCGCGCGTGCTGAAGGTTTTGCCAGCGAACAGGACTGCCTGGCCATC GCGCCGGACGACCTCTTCAAGCGCGACGATGTCGACGCCATCGTCATGGC GCTGCCGCCGCAGTTCCATGCCGATCTTTCGATCCGTGCCGTCGAGGCCG GCAAGGACGTGCTGGTCGAGAAGCCGATCGCGTTGACGGTGCCGGATGCC GAGCGCTCGGTTCAGGCGGCAAAGGACAATCACCGCGTCTTCATGGTTGG CCATGTGCTGCGTTTCCATCCGGCTTTCGAGAAACTGAAGGCGCTGGTGG ATGCCGGCGAACTCGGCGAAATCCGCTACATCCATTCACACCGTCTCGGC CTTGGCAAATTCCACACCGAGAATGATGCGTTGTGGGATCTGGCGCCGCA CGACCTGTCGATGATCCTGGCTCTTACCGGCACCGAACCGCTGGAAGTGC GCGGCGAGGGGGCGGCGCTGCTCGACCATCTCAGTGATTTCGCGCATCTG CACATGCGCTTCCCGAACAATCTGAGAAGCCACCTCTTTGCTTCGCGGCT CAATCCCTATCGTGAGCGCCGCCTGACCGTGGTCGGCGCCAGGGCGATGG CGGTTTTCGACGACGTCGAGCCTTGGGAAAGAAAGCTCGCGGTTTATCAT CACGCCGTATGGCAGGACAGCGGTCAATGGGCCGCCACCAGCAACGAGCC GACCTATATCGAGGTCGAGCAGGGAATGCCGCTGACGCGTGAGCTGCAGC ACTTTCTGGAATGCATCGAAACGCGCGCCGAGCCCCGCACGGACGGCGAA GAAGCGATCCGGGTGCTGCGTATCCTGACCGCGGGTACGGTCACCCACGG CCGTATCGGCGGCTGA
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Coding sequence (CDS) from alignment at Contig_557:206..1171+

>mRNA_18908 ID=mRNA_18908|Name=jgi.p|Trimin1|182487|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=966bp|location=Sequence derived from alignment at Contig_557:206..1171+ (Tribonema minus UTEX_B_3156 )
ATGAAACCGCGTATAGCAGTCCTCGGATGCGGGTACTGGGGCAGCAACCA
TATCCGGACGCTGAAAGGGCTGGGCGCACTCCATGCGGTTTCAGATGCCA
ATTTCGCGCGTGCTGAAGGTTTTGCCAGCGAACAGGACTGCCTGGCCATC
GCGCCGGACGACCTCTTCAAGCGCGACGATGTCGACGCCATCGTCATGGC
GCTGCCGCCGCAGTTCCATGCCGATCTTTCGATCCGTGCCGTCGAGGCCG
GCAAGGACGTGCTGGTCGAGAAGCCGATCGCGTTGACGGTGCCGGATGCC
GAGCGCTCGGTTCAGGCGGCAAAGGACAATCACCGCGTCTTCATGGTTGG
CCATGTGCTGCGTTTCCATCCGGCTTTCGAGAAACTGAAGGCGCTGGTGG
ATGCCGGCGAACTCGGCGAAATCCGCTACATCCATTCACACCGTCTCGGC
CTTGGCAAATTCCACACCGAGAATGATGCGTTGTGGGATCTGGCGCCGCA
CGACCTGTCGATGATCCTGGCTCTTACCGGCACCGAACCGCTGGAAGTGC
GCGGCGAGGGGGCGGCGCTGCTCGACCATCTCAGTGATTTCGCGCATCTG
CACATGCGCTTCCCGAACAATCTGAGAAGCCACCTCTTTGCTTCGCGGCT
CAATCCCTATCGTGAGCGCCGCCTGACCGTGGTCGGCGCCAGGGCGATGG
CGGTTTTCGACGACGTCGAGCCTTGGGAAAGAAAGCTCGCGGTTTATCAT
CACGCCGTATGGCAGGACAGCGGTCAATGGGCCGCCACCAGCAACGAGCC
GACCTATATCGAGGTCGAGCAGGGAATGCCGCTGACGCGTGAGCTGCAGC
ACTTTCTGGAATGCATCGAAACGCGCGCCGAGCCCCGCACGGACGGCGAA
GAAGCGATCCGGGTGCTGCGTATCCTGACCGCGGGTACGGTCACCCACGG
CCGTATCGGCGGCTGA
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