mRNA_1888 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|163571 vs. uniprot
Match: A0A835YZ34_9STRA (Caspase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZ34_9STRA) HSP 1 Score: 627 bits (1617), Expect = 6.950e-227 Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 1 Query: 1 MGKSKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEPTGEEICNAISKLAELSKSQDLDYTFISYSGHGTQIKDTTGDETDGKDEAICPADFGMRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGDATLPGKIAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKAQKLDEETHHDVFALVAGMKKLLRAGGYSQIPVLSSSFDIPRQFAFIPHRHRVQVAAKQKTQMTKQPSISQLCTRWVKVYHLRTQRRSSESTALMALPRLQSTSSTSKRFGFACSRRICR 957 MGKSKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEPTGEEICNAISKLAELSKSQDLDYTFISYSGHGTQIKDTTGDETDGKDEAICPADFGMRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGDATLPGKIAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKAQKLDEETHHDVFALVAGMKKLLRAGGYSQIPVLSSSFDIPRQFAFIPHRHRVQVAAKQKTQMTKQPSISQLCTRWVKVYHLRTQRRSSESTALMALPRLQSTSSTSKRFGFACSRRICR Sbjct: 1 MGKSKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEPTGEEICNAISKLAELSKSQDLDYTFISYSGHGTQIKDTTGDETDGKDEAICPADFGMRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGDATLPGKIAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKAQKLDEETHHDVFALVAGMKKLLRAGGYSQIPVLSSSFDIPRQFAFIPHRHRVQVAAKQKTQMTKQPSISQLCTRWVKVYHLRTQRRSSESTALMALPRLQSTSSTSKRFGFACSRRICR 319
BLAST of jgi.p|Trimin1|163571 vs. uniprot
Match: A0A835Z623_9STRA (Peptidase C14 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z623_9STRA) HSP 1 Score: 482 bits (1240), Expect = 1.480e-170 Identity = 241/248 (97.18%), Postives = 244/248 (98.39%), Query Frame = 1 Query: 1 MGKSKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEPTGEEICNAISKLAELSKSQDLDYTFISYSGHGTQIKDTTGDETDGKDEAICPADFGMRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGDATLPGKIAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKAQKLDEETHHDVFALVAGMKKLLRAGGYSQIPVLSSSFDIPRQFAFIPH 744 MGKSKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEPTGE+ICNAISKLAELSKSQDLDY FISYSGHGTQIKDTTGDETDGKDEAICPADFG RGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSG+ATLPGKIAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKA K+DEETHHDVFALVA MKKLLRAGGYSQIPVLSSSFDIPRQFAFIPH Sbjct: 1 MGKSKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEPTGEDICNAISKLAELSKSQDLDYIFISYSGHGTQIKDTTGDETDGKDEAICPADFGTRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGEATLPGKIAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKAHKVDEETHHDVFALVADMKKLLRAGGYSQIPVLSSSFDIPRQFAFIPH 248
BLAST of jgi.p|Trimin1|163571 vs. uniprot
Match: A0A835ZCN1_9STRA (Peptidase C14, caspase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCN1_9STRA) HSP 1 Score: 390 bits (1002), Expect = 2.530e-134 Identity = 191/249 (76.71%), Postives = 219/249 (87.95%), Query Frame = 1 Query: 1 MGKSKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEPTGEEICNAISKLAELSKSQDLDYTFISYSGHGTQIKDTTGDETDGKDEAICPADFGMRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGDATLPGKIAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKAQKLDEETHHDVFALVAGMKKLLRAGGYSQIPVLSSSFDIPRQFAFIPHR 747 M +S+ALCIGINYGKTANALQGCVNDA NL KLL SGAVA EDITVLCEPTGEE+CNAIS LA+LS SQ+L+Y FISYSGHGTQ+KD TGDE DG+DEAICP+DF ++GVITDDLLKSLLQ+FN TTVCFLADACHSGS+LD+NR YTS++CTLSGDA LPGKIAYISGCRD QTSADA+DQDSR + G MT A IK+QK++ T DVF LVA M+KLLRA GY+QIPVL++SFDIPR F+FIP++ Sbjct: 1 MSRSRALCIGINYGKTANALQGCVNDANNLSKLLDGSGAVAMEDITVLCEPTGEELCNAISHLADLSVSQNLNYVFISYSGHGTQVKDVTGDEADGRDEAICPSDFNIKGVITDDLLKSLLQRFNIATTVCFLADACHSGSLLDMNRQYTSKICTLSGDAELPGKIAYISGCRDPQTSADAYDQDSRTYQGVMTCARIKSQKINPATRTDVFKLVAEMRKLLRAQGYAQIPVLTASFDIPRAFSFIPYK 249
BLAST of jgi.p|Trimin1|163571 vs. uniprot
Match: A0A836CI31_9STRA (Peptidase C14, caspase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI31_9STRA) HSP 1 Score: 296 bits (758), Expect = 3.230e-97 Identity = 151/246 (61.38%), Postives = 183/246 (74.39%), Query Frame = 1 Query: 7 KSKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEPTGEEICNAISKLAELSKSQDLDYTFISYSGHGTQIKDTTGDETDGKDEAICPADFGMRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGDATLPGKIAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKAQKLDEETHHDVFALVAGMKKLLRAGGYSQIPVLSSSFDIPRQFAFIPH 744 KS+ALCIGINY +++ALQGC+NDAKNL LL SGAVA+ +I +LCE T +I ++ LA+ K L Y FISYSGHGTQ+ D DETDGKDE ICP+DF GVITDD+LK + QF + TTVCFL DACHSGSMLDLN TY + + T+SG +L K+ ISGCRD QTSADAFDQ S +TGAMTSA++K+ K DV LVA M+K+LRAGG+SQ PVLS+SF +PRQFAFIP+ Sbjct: 4 KSRALCIGINYTGSSSALQGCINDAKNLSALLNASGAVASANIQLLCEATAAQIHEGLTNLAQKCKDDKLTYAFISYSGHGTQVADLNKDETDGKDECICPSDFTKSGVITDDMLKDRIAQFPSWTTVCFLCDACHSGSMLDLNHTYVNSIDTVSGTNSLACKVVMISGCRDNQTSADAFDQSSSAYTGAMTSAMLKSLKNVFACRTDVIRLVAEMRKVLRAGGFSQYPVLSTSFTLPRQFAFIPY 249
BLAST of jgi.p|Trimin1|163571 vs. uniprot
Match: A0A836CKL4_9STRA (Putative caspase-1, p20 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKL4_9STRA) HSP 1 Score: 206 bits (525), Expect = 5.690e-62 Identity = 117/245 (47.76%), Postives = 154/245 (62.86%), Query Frame = 1 Query: 10 SKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEPTGEEICNAISKLAELSKSQDLDYTFISYSGHGTQIKDTTGDETDGKDEAICPADFGMRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGDATLPGK-IAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKAQKLDEETHHDVFALVAGMKKLLRAGGYSQIPVLSSSFDIPRQFAFIP 741 S+AL + NY T L+GC ND L+ LV SGAV + VL E + + A+ LA S+ + L Y FI+YSGHGTQ++D GDE DG DEAICP D GV++DDLL+ + F T+V F+ DACHSGSMLDL +Y R C +G A+ G+ + ISGCRD+QTSADAF Q+ GA+T L+++ + E DVF LV + L+ GG+ Q+PVLSSSF IPR+ AF+P Sbjct: 3 SRALLLCNNYVGTDAELRGCHNDGDCLKAALVSSGAVPEGRVRVLREASAADAVAALEDLARRSREERLAYVFIAYSGHGTQVRDADGDEADGLDEAICPGDVETAGVVSDDLLRRVFAGFYYRTSVVFVCDACHSGSMLDLRFSYDGRRCADAGAASDVGRRVLMISGCRDSQTSADAF-LGGTQYGGALTDCLLRSLRDVPEARGDVFRLVHETCRRLKEGGFDQVPVLSSSFLIPRRHAFMP 246
BLAST of jgi.p|Trimin1|163571 vs. uniprot
Match: A0A6C0CTM3_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0CTM3_9ZZZZ) HSP 1 Score: 174 bits (440), Expect = 2.620e-49 Identity = 108/245 (44.08%), Postives = 142/245 (57.96%), Query Frame = 1 Query: 7 KSKALCIGINYGKTANA-LQGCVNDAKNLQKLLVDSGAV----AAEDITVLCEPTGEEICNAISKLAELSKSQDLDYTFISYSGHGTQIKDTTGDETDGKDEAICPADFGMRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGDAT--LPGKIAYISGCRDTQTSADAFD-QDSRQFTGAMTSALIKAQKLDEETHHDVFALVAGMKKLLRAGGYSQIPVLSSSFDI 717 KSKA+ GINY T A L+GCVND +N+ K L + A D + TG I N+I KLA S +LD +I YSGHG I D GDE+DGKDE I PAD+ RGVITDDL+K +L+ FN T V + D CHSG++ DL Y +A I +SGC D QTSADA++ + R+F+GAMTS L+ A E + F + +KK+LRA ++Q+P L+SSF + Sbjct: 2 KSKAILFGINYNNTPQARLRGCVNDVRNMAKFLKEKAKYDVVKAYTDDDDFNKVTGSYIINSIYKLAIDSHRHNLDRVWIHYSGHGCAINDRDGDESDGKDECIVPADYNYRGVITDDLIKRVLRYFNKRTQVTCIFDCCHSGTIGDLKYEYRDPHVYREENAKSKCQSNIMLLSGCMDHQTSADAYNVRGRREFSGAMTSCLLVAM----ENSSNAFEVFDDLKKMLRAKRFTQVPRLTSSFKV 242
BLAST of jgi.p|Trimin1|163571 vs. uniprot
Match: A0A835XKF2_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XKF2_9CHLO) HSP 1 Score: 171 bits (432), Expect = 1.190e-47 Identity = 100/259 (38.61%), Postives = 153/259 (59.07%), Query Frame = 1 Query: 7 KSKALCIGINYGKT-ANALQGCVNDAKNLQKLLVDS-GAVAAEDITVLCEPTGEEICNA------ISKLAELSKSQDLDYTFISYSGHGTQIKDTTGDETDGKDEAICPADFGMRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTL-SGDATLPGKIAYISGCRDTQTSADAFDQDS-RQFTGAMTSALIKAQKLDEETHHDVFALVAGMKKLLRAGGYSQIPVLSSSFDI--PRQFAFIPHR 747 +++AL G+NY ++ALQGC+ND +N++ L++ GA D+ G +A +S+LA L+ +DL++ +I YSGHGT++ D + DE DG DE + P+D+ GVI DD L L +QFN T V + D+CHSG+++DL ++ R CT+ + ++ + I +SGC D+QTSADA++ D RQ+TGAMTS ++ + D F LV M+ LR ++Q P L SSF + P A +P R Sbjct: 28 RARALLFGLNYAHMPSSALQGCINDVQNMKAYLMNRLGAELVCDVATDDTAAGRTATSAMGMTRKLSELAVLTYKEDLEFVWIHYSGHGTRVVDRSKDELDGYDECLVPSDYTTAGVIPDDYLAKLFEQFNPKTRVIAVFDSCHSGTVVDLKYSWEGRACTMENSNSRVRAPIMALSGCLDSQTSADAYNVDGQRQYTGAMTSVMLHVLQTTGAAADDAFLLVDAMRAHLREQNFTQWPKLCSSFSLVLPSSRAMLPRR 286
BLAST of jgi.p|Trimin1|163571 vs. uniprot
Match: A0A7M3UPF5_POV01 (Uncharacterized protein n=1 Tax=Pyramimonas orientalis virus TaxID=455367 RepID=A0A7M3UPF5_POV01) HSP 1 Score: 164 bits (416), Expect = 1.150e-45 Identity = 104/253 (41.11%), Postives = 149/253 (58.89%), Query Frame = 1 Query: 7 KSKALCIGINYGKTANA-LQGCVNDAKNLQKLLV-----DSGAVAAEDITVLCEPTGEEICNAISKLAELSKSQDLDYTFISYSGHGTQIKDTTG--DETDGKDEAICPADFGMRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTS--RLCTLSGDAT-LPGKIAYISGCRDTQTSADAFD-QDSRQFTGAMTSALIKAQKLDEETHHDVFALVAGMKKLLRAGGYSQIPVLSSSFDIPRQF 729 KSKA+ GINY T A L+GCVND KN+ K L D V +++ + G+ I N++ KLA S L+ +I +SGHGT ++D+ G DE+DG DE I P+D+ GVI DD +K +L+ FN T V + D CHSG++ DL Y R + + + I ISGC D+QTSADAF+ Q RQ+TGAMTS L++ K E+ +F ++ ++ LLR + Q P+LSSSF++P+ + Sbjct: 2 KSKAILFGINYVNTPQARLRGCVNDVKNVAKYLTKEEKYDVVKVYSDEADET-KTRGQSIVNSMYKLAIDSHRYRLERVWIHFSGHGTHVRDSYGYRDESDGNDECIVPSDYNRCGVIRDDTIKRILRMFNPTTKVTCVFDCCHSGTIGDLKYVYKKIDRTPEIENNGSKCMANICLISGCTDSQTSADAFNVQGKRQYTGAMTSCLLEVLK--NESDKSIFNVLESLRDLLRQKRFPQYPLLSSSFEVPQNY 251
BLAST of jgi.p|Trimin1|163571 vs. uniprot
Match: A0A6C0E8Z1_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0E8Z1_9ZZZZ) HSP 1 Score: 158 bits (399), Expect = 5.100e-43 Identity = 97/242 (40.08%), Postives = 137/242 (56.61%), Query Frame = 1 Query: 16 ALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCE-------PTGEEICNAISKLAELSKSQDLDYTFISYSGHGTQIKDTTGDETDGKDEAICPADFGMRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYT--SRLCTLSGDATLPGKIAYISGCRDTQTSADAFDQDSRQFTGAMTSALIKAQKLDE--ETHHDVFALVAGMKKLLRAGGYSQIPVLSSS 708 AL IGINY T+N L GC+ND N++ +L+ + AE+I V+ E PT I N L + + + YSGHG+ I DT GDE DGKDE I P D+ G+I+DDLL + ++ +T L D CHSG++LDL Y ++ T + + + GK+ ISGC+D QTSADA +++GAMT+A +K+ +L E T++ + L M+ LR Y QIP LSSS Sbjct: 5 ALLIGINYKGTSNELNGCINDVTNMRDVLIKNFGYLAENIVVMTEDQPNNLKPTALNIMNQFGSLIIKAHHKQAKEIWFHYSGHGSYIDDTNGDELDGKDEVIVPLDYEKSGMISDDLLHNYMEYLPVETRFFCLFDCCHSGTILDLKHRYLGGNKHHTENNKSKIKGKVVMISGCKDDQTSADALI--GTKWSGAMTAAFLKSMELCEYKTTYYHLLDL---MRDYLRENKYDQIPQLSSS 241
BLAST of jgi.p|Trimin1|163571 vs. uniprot
Match: A0A6C0M0H5_9ZZZZ (Uncharacterized protein n=1 Tax=viral metagenome TaxID=1070528 RepID=A0A6C0M0H5_9ZZZZ) HSP 1 Score: 149 bits (375), Expect = 1.790e-39 Identity = 93/241 (38.59%), Postives = 123/241 (51.04%), Query Frame = 1 Query: 4 GKSKALCIGINY-GKTANALQGCVNDAKNLQKLLVDSGAVAA----EDITVLCEPTGEEICNAISKLAELSKSQDLDYTFISYSGHGTQIKDTTGDETDGKDEAICPADFGMRGVITDDLLKSLLQQFNNDTTVCFLADACHSGSMLDLNRTYTSRLCTLSGDATLPGKIAYISGCRDTQTSADA-FDQDSRQFTGAMTSALIKAQKLDEETHHDVFALVAGMKKLLRAGGYSQIPVLSSS 708 GK KAL G+NY L+GCVND K++ L G ED+ ++ T + I I +LA S + LD I YSGHG I+DT+GDE+DG DE +CP D GVITDD L L+ FN T + + D CHSGS LDL Y + + D + ISGCRD QTSADA F +F+GA+T L+ K+ G++Q+P++SSS Sbjct: 16 GKKKALLFGLNYTASEVGRLRGCVNDIKDMSVFLRGKGFEVEMYHDEDLDLVYGTTYDGIVRGIQRLAIASWKESLDAVVIHYSGHGYYIRDTSGDESDGYDECLCPTDMDSNGVITDDYLHELINSFNPKTRITVILDCCHSGSALDLPYCYKTSYDVVIEDKKCNVNVTMISGCRDNQTSADANFGTIYDKFSGALTKNLLDILKVQPNILP--IXXXXXXXXXXXXXGFNQLPMISSS 254 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163571 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1888 ID=mRNA_1888|Name=jgi.p|Trimin1|163571|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=960bp|location=Sequence derived from alignment at Contig_26:410927..411886+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGGTAAATCGAAAGCGCTTTGCATCGGCATCAACTATGGCAAGACAGCback to top protein sequence of jgi.p|Trimin1|163571 >Trimin1|163571|e_gw1.26.224.1 ID=Trimin1|163571|e_gw1.26.224.1|Name=jgi.p|Trimin1|163571|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=320bp MGKSKALCIGINYGKTANALQGCVNDAKNLQKLLVDSGAVAAEDITVLCEback to top mRNA from alignment at Contig_26:410927..411886+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1888 ID=mRNA_1888|Name=jgi.p|Trimin1|163571|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=960bp|location=Sequence derived from alignment at Contig_26:410927..411886+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_26:410927..411886+ >mRNA_1888 ID=mRNA_1888|Name=jgi.p|Trimin1|163571|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=960bp|location=Sequence derived from alignment at Contig_26:410927..411886+ (Tribonema minus UTEX_B_3156 )back to top |