mRNA_1885 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|163635 vs. uniprot
Match: A0A835Z7H4_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7H4_9STRA) HSP 1 Score: 1386 bits (3587), Expect = 0.000e+0 Identity = 674/696 (96.84%), Postives = 687/696 (98.71%), Query Frame = 1 Query: 1 MPELPWVRNDYAGTYDADLFFGAGQEGTPYVHIRTRAYNGMVPGPLIRMKACRNYRITVHNMLAEYPAGKTGTGSGQYDPTWTNLHLHGLHVSGDAPSDDVVTVNIKPGLSFTYTYRIPCDHAGGTNWYHPHKRGSTALQADGGAAGMVIIEGSVREAANTPVAYGTVPEHMLVVQEIVPYGANELVENAAAAEDQLLIVTTNTRASYWNGMTVKVEANLWQRVRILNVATTYNTVLTITPVNPVGGAPCSVVLLAKDGVFVASMPRSVPAEQSIFLSLSSRVDLAIRCPAAVSTRANAGKIVAEHHIRYRHIKHNGVAELPDTDIITTIANIVVYSSARPVAPNLPVWQPCRPAYLTKLAAPSGSPRPVAAIAVAALDGVPLTLGSTVQWDVSFSFLHPLHTHVNHMQLGPVTAANQWSSLPGWNVAGDWIDTLAAPGTVPVYIRPERYTGKMVVHCHVAYHADSLGMTAAMAISGSGDGPNDIPVVTNFGTCITAPPKNQPYTTNAPFAITSFGAKMLAYKFHRGGEGIAYKNYNIGRRAILNLDRINTGIVRNDGASVEIDYSSAFGRYFVTRVRNAEWMLYTVNIQTAGVYSAALHVAAPFREDQAPITMNWSLWLDPSSGSGCPHPGSSALLVRVRDDGWKGTGPTAPAPIRAHPEAVVSRLKFNLPAGVHTLSLCFEGSAGGFELYYLEV 2088 MPELPWVRNDYAGTYDADLFFGAG+EGTPYV IRTRAYNGMVPGPLIRMKACRNYRITVHNMLAEYP GKTGTGSGQYDPTWTNLHLHGLHVSGDAPSDDV+TVNI+PGLSFTYTYRIPCDHAGGTNWYHPHKRGSTALQADGGAAGMVIIEGSVREAANTPVAYGTVPEHMLVVQEIVPYGANEL ENAAAAEDQLL VTTNTRASYWNGMTVKVEANLWQRVRILNVATTYNTVLTITPVNPVGGAPCSVVLLAKDGVFVAS+PRSVPAEQSIFLSLSSRVDLAIRCPA VSTRANAG+IVAEHHIRYRHIKH+G AELPDTDIITTIANIVVYSSARPVAPNLPVWQPCRPAYLTKLAAPSG+PRPVAAIAVAALDG+PLTLGSTVQWDVSFSFLHPLHTHVNHMQLGP+TAANQWSSLPGW+VAGDWIDTLAAPGTVPVYIRPERYTGKMVVHCHVAYHADSLGMTAAMAISGSGDGPNDIPVVTNFGTCITAPPKNQPYT NAPFAITSFGAKMLAYKF RGGEGIAYKNYNIGRRAILNLDRINTGIVRNDGASVEIDYSSAFGR+FVTRVRN+EWMLYTVNIQTAGVYSAALHVAAPFREDQAPITMNWSLWLDPSSGSGCP+PGSSALLVRVRDDGWKGTGPTAPAPIRAHPEAVVSRLKFNLP GVHTLSLCFEGSAGGFELYYLEV Sbjct: 1 MPELPWVRNDYAGTYDADLFFGAGEEGTPYVLIRTRAYNGMVPGPLIRMKACRNYRITVHNMLAEYPVGKTGTGSGQYDPTWTNLHLHGLHVSGDAPSDDVLTVNIQPGLSFTYTYRIPCDHAGGTNWYHPHKRGSTALQADGGAAGMVIIEGSVREAANTPVAYGTVPEHMLVVQEIVPYGANELAENAAAAEDQLLTVTTNTRASYWNGMTVKVEANLWQRVRILNVATTYNTVLTITPVNPVGGAPCSVVLLAKDGVFVASLPRSVPAEQSIFLSLSSRVDLAIRCPAIVSTRANAGEIVAEHHIRYRHIKHSGAAELPDTDIITTIANIVVYSSARPVAPNLPVWQPCRPAYLTKLAAPSGNPRPVAAIAVAALDGIPLTLGSTVQWDVSFSFLHPLHTHVNHMQLGPITAANQWSSLPGWHVAGDWIDTLAAPGTVPVYIRPERYTGKMVVHCHVAYHADSLGMTAAMAISGSGDGPNDIPVVTNFGTCITAPPKNQPYTVNAPFAITSFGAKMLAYKFDRGGEGIAYKNYNIGRRAILNLDRINTGIVRNDGASVEIDYSSAFGRFFVTRVRNSEWMLYTVNIQTAGVYSAALHVAAPFREDQAPITMNWSLWLDPSSGSGCPNPGSSALLVRVRDDGWKGTGPTAPAPIRAHPEAVVSRLKFNLPTGVHTLSLCFEGSAGGFELYYLEV 696
BLAST of jgi.p|Trimin1|163635 vs. uniprot
Match: A0A835ZCB5_9STRA (CBM6 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCB5_9STRA) HSP 1 Score: 502 bits (1292), Expect = 3.930e-161 Identity = 312/726 (42.98%), Postives = 411/726 (56.61%), Query Frame = 1 Query: 4 PELPWVRNDYAGTYDADLFFGA-----GQEGTPYVHIRTRAYNGMVPGPLIRMKACRNYRITVHNMLAEYPAGKTGTG--SGQYDPTWTNLHLHGLHVSGDAPSDDVVTVNIKPGLSFTYTYRIPCDHAGGTNWYHPHKRGSTALQADGGAAGMVIIEGSVREAANTPVAYGTVPEHMLVVQEIVPYG----ANELVENAAAAEDQLLIVTTNTRASYWNGMTVK-----------VEANLWQRVRILNVATTYNTVLTITPVNPVGGAPCSVVLLAKDGVFVASMPRSVPAEQSIFLSLSSRVDLAIRCPAAVSTRANAGKIVAEHHIRYRHIKHNG--VAELPDTDIITTIANIVVYSSARPVAPNLPVWQPCRPAYLTKLA-APSGSPRPVAAIAVA-ALDGVPLTLGSTV----------QWDVSFSFLHPLHTHVNHMQLGPVTAANQWSSLPGWNVAGDWIDTLAAPGTVPVYIRPERYTGKMVVHCHVAYHADSLGMTAAMAISGSGDGPNDIPVVTNFGTCITAPPKNQPYTTNAPFAITSFGAKMLAYKFHRGGEGIAYKNYNIGRRAILNLDRINTGIVRNDGASVEIDYSSAFGRYFVTRVRNAEWMLYTVNIQTAGVYSAALHVAAPFR-EDQAPITMNWSLWLDPSSGSGCPHPGSSALLVRVRDDGWKGTGPTAPAPIRAHPEAVVSRLKFNLPAGVHTLSLCFEGSAGGFE 2070 PEL W GT+ ADL G GT +RTRA+NG++PGP+IRMKAC+ Y +TV N L +P GK TG +G + PT TN+H HGLH+SG++P+D+ V+I PG +TY YRIPCDH GG +WYHPHK G+ ALQ GGAAG+++IE REA+ TP A T+PE L++QEI P G A + + ++ N ++ G+ VK VEA W R+R+LNV YN+++TI P + G PC + LLAKDGV +A PR+V A ++F+SLS+R+D+AI+C A G + H++ Y H+ G VA P TIA I V RP A LP+W PCRP YLT P P + V AL+G T T W ++ S HPLH HV+HMQLG V NQW P WN+ GDW+D+++APG VPVY+RPERY G V+HCH+A H+D +G+ A M + G P V N+GTC A P + PY NA + A F GGE +AY N +N+DR +R ASVEID A +T +R+ EW+ YTVN+ AG Y AL+VAA R + QAP+ M+WSLWLD +G+ CP PG+ L+RV D W GTG A P A ++ F LPAG+HTL+LCFEG+A + Sbjct: 388 PELGWTHQA-DGTFTADLTLGVVTLTTADGGT----LRTRAWNGLIPGPIIRMKACQVYYLTVRNDLGAWPEGKPETGVMNGFHGPTVTNIHTHGLHISGESPADNPF-VSILPGQEYTYQYRIPCDHIGGLHWYHPHKHGAVALQTHGGAAGLIVIEPMAREASVTPAAIQTMPEQYLMIQEIDPPGLQAFATQSGDRIFDSDITAAFTLVNGCSAPGAGVVVKPAMTTALANINVEAGQWTRLRLLNVGHQYNSIITIEP-KVLNGVPCQLGLLAKDGVPLADAPRAV-AGNALFVSLSTRLDVAIKCFVA-------GVV---HNVAYAHVGDVGAEVAAAP------TIATITVTPFLRPPADPLPLWAPCRPGYLTDARKVPRRLRGPPFDLTVRDALNGQKFTSPDTYIRTMSNRNLEAWQITGSDKHPLHIHVDHMQLGAVGVTNQWPGAPNWNMPGDWVDSISAPGAVPVYMRPERYGGHRVMHCHIAEHSD-MGIMAVMYVR-YGSTAKPFPYVKNWGTCPKAEPVSTPYGGNA----AKLPGTIEAEAFDLGGEAVAYHN--------INIDRGAPSAMRVGEASVEIDNIGAAKA--ITYIRDGEWLKYTVNVTKAGTYFVALNVAAAARPKGQAPLGMHWSLWLD--AGNFCPAPGAKGQLLRVEDAAWNGTGGAVAFAAYA-PAAALNA--FTLPAGIHTLTLCFEGAAANYS 1068
BLAST of jgi.p|Trimin1|163635 vs. uniprot
Match: A0A836C7C1_9STRA (Cupredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7C1_9STRA) HSP 1 Score: 488 bits (1256), Expect = 5.130e-159 Identity = 315/778 (40.49%), Postives = 413/778 (53.08%), Query Frame = 1 Query: 1 MPELPWVRNDYAGTYDADLFFGAGQ---------------EGTPYVH-IRTRAYNGMVPGPLIRMKACRNYRITVHNMLAEYPAGKTG----TGSGQYDPTWTNLHLHGLHVSGDAPSDDVVTVNIKPGLSFTYTYRIPCDHAGGTNWYHPHKRGSTALQADGGAAGMVIIEGSVREAANTPVAYGTVPEHMLVVQEIVPYGANELVENAAAAEDQLL--------------IVTTN--------TRASYWNGMTVKVEANLWQRVRILNVATTYNTVLTITPVNPVGGAPCSVVLLAKDGVFVASMPRSVP-AEQSIFLSLSSRVDLAIRCP--AAVSTRANAGKIVAEHHIRYRHIKHNGVAELPDTDIITTIANIVVYSSARPVAPNLPV--WQPCRPAYLTKL---AAPSGSPRPVAAIAVA-ALDGVPLTLGSTVQWDVSFSFLHPLHTHVNHMQLGPVTAANQWSSL--PGWNVAGDWIDTLA----------------------APGTVPVYIRPERYTGKMVVHCHVAYHADSLGMTAAMAISGSGDGPNDIPVVTNFGTCITAPPKNQPYTTNAPFAITSFGAKMLAYKFHRGGEGIAYKNYNIGRRAILNLDRINTGIVRNDGASVEIDYSSAFGRYFVTRVRNAEWMLYTVNIQTAGVYSAALHVAAPFREDQAPIT-MNWSLWLDPSSGSGCPHPGSSALLVRVRDDGWKGTGPTAPAPIRAHPEAVVSRLKFN------LPAGVHTLSLCFEGSAGGFELYYLEV 2088 +PEL W R Y Y +L A + H +RT AYNGM+PGPLIRMKAC Y++TV N L +P G G+G PT TNLH+HGLHVS AP DDVV I PG TYTY+IPCDH GT WYHPH+ GSTALQAD GAAGM+IIEG REA +T Y +PE+MLV+QE+ +G L + A A+ D+L V N AS + ++VEA W RVR+LNVA N VL + P + GGA C V +LAKDGV +A +PR + A ++FLSL+SRVDLA+RCP A A AG + I+Y+ + G + + + + + I VY S RP A +L W PCRPAYLT + AA A VA ALD +TL +W V++S HP+HTHVNHM LG V + Q L P W+ DW+DTLA G VY+RPER+ G MVVHCHVA HAD+ GM+A ++G D P+ VV ++GTC T P + P+ + I G+K A F G +G+AY N GRR L ++ VR D ++VE+D ++VT +R E++ YT+N+ T G Y A ++A P P ++W L+LD G GCP PGS L W+G+GP PA + V+ + N L AG+HTL+LCF+ F+LYY+E+ Sbjct: 46 LPELQWYRASYDTVYSGELTLSAVYLTVKSNRVDPAAATVDDPNQTHTVRTFAYNGMIPGPLIRMKACNTYKLTVVNKLGNWPEGVLDPPYPNGNGANRPTVTNLHVHGLHVSSAAPGDDVVDTKIAPGHELTYTYKIPCDHVSGTYWYHPHRHGSTALQADSGAAGMLIIEGGGREAYDTAAPYKDLPENMLVIQEL-HFG--NLAKLALASGDRLFHYDGALFPSAPPPPAVLANGCVACSGPAAASCLSAPLIEVEAGQWARVRVLNVAVALNVVLRLEPADA-GGAACDVAVLAKDGVPLAQLPRMLDTARNAVFLSLASRVDLAVRCPYGAGGDGTAPAGAQL----IKYKQLDALG-STFKASPVESVLGTIAVYPSKRPKAKDLVATPWTPCRPAYLTDIPETAANLKIKEAFFAFGVAGALDKYAMTLNVPEKWTVTYSTAHPMHTHVNHMLLGAVDSTQQPDPLLLPDWHQKEDWVDTLAXXXXXXXXXXXXXXXXXXXAVGGAGAATVYVRPERFAGNMVVHCHVAEHADN-GMSAVATVAGPDDPPDAFTVV-DYGTCTTPPAETTPFFDQV-YQID--GSKKRAMFFDNGKDGVAYHNIISGRRKELYVETKLGQNVRRDSSTVEVDIDPQNSEFYVTEIRPGEFLRYTINVPTTGAYQFATYIAVPIPPPNRPAPGISWGLFLDVPPGGGCPPPGSPGDLFHAYSARWRGSGPPPPA------KPVIVKFPANGSWDIDLEAGLHTLTLCFDTFDRTFDLYYIEL 803
BLAST of jgi.p|Trimin1|163635 vs. uniprot
Match: A0A835YQ52_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ52_9STRA) HSP 1 Score: 474 bits (1220), Expect = 1.820e-151 Identity = 304/734 (41.42%), Postives = 399/734 (54.36%), Query Frame = 1 Query: 1 MPELPWVRNDYAGTYDADLFFGAGQEGTPYVHIRTRAYNGMVPGPLIRMKACRNYRITVHNMLAEYPAG-KTGTGSGQYDPTWTNLHLHGLHVSGDAPSDDVVTVNIKPGLSFTYTYRIPCDHAGGTNWYHPHKRGSTALQADGGAAGMVIIEGSVREAANTPVAYGTVPEHMLVVQEIVPYGANELVENAAAAEDQLLIVTTNTRASYW---NGM----TVKVEANLWQRVRILNVATTYNTVLTITPVNPVGGA-PCSVVLLAKDGVFVASMPRSVPAEQSIFLSLSSRVDLAIRCPAAVSTRANAGKIVAEHHIRYRHIKHNGVAELPDTDIITTIANIVVYSSARPVAPNLPVWQPCRPAYLTKLAAPSGSPRPVAAIAVAALDGV-------------PLTLGSTVQWDVSFSFLHPLHTHVNHMQLGPVTAANQWSSLPGWNVAGDWIDTLAAPGTVPVYIRPERYTGKMVVHCHVAYHADSLGMTAAMAISGS-------------GDGPNDIPVVTNFGTCITAPPKNQPYTTNAPFAITSFGAKMLAYKFHRGGEGIAYKNYNIGRRAILNLDRINTGIVRNDGASVEIDYSSAFGRYFVTRV---RNAEWMLYTVNIQTAGVYSAALHVAAPFREDQAPITMNWSLWLDPSSGSGCPHPGSSALLVRVRDDGWKGTGPTAPAPIRAHPEAVVSRLKFNLPAGVHTLSLCFEGSAGGFELYYLEV 2088 MPEL W RN+ GTY DL F A TP +RTRA+N MV P+IRMKAC Y++ V+N L ++P G + + +DPT N+HLHGLH+SG+APSDDV TV + PG + YTY +PCDHAGG +W ALQ GGAAG++IIE REA+ P A+ T+PE +++ + + L A + D + A + NG T ++EA W ++RILNV TYN LT+ P P G PC V+L+AKDGV V PR+V A+ +F+SL+SR+++A+RCP A A H Y+H G+ + P TIA + V +S R AP+LP PCR YLT AA R DG+ L +W V+ SF HP+H HVNHM++ VT N +P WNV GDWIDTLA P V VY+R ER+TGKM++HCH+A H+D LG+T M I + GP DI V ++GTC P + P+ AP A+ + A +F GGEGIAY N +NLDR +R ASVEID + A G+ VT V R+ EW+ Y+VNI AG Y+A+L VAA P+ M+WSLWLD G CP PG+ L+ V DD W GTG A+ R+ L G HT++LCFEG+AG FEL L + Sbjct: 298 MPELQWTRNE-DGTYGGDLIFDAVNLNTPNGVVRTRAFNYMVSAPVIRMKACNTYKLNVNNNLVDWPVGIQEAVPNSVHDPTVMNIHLHGLHISGEAPSDDVFTV-VAPGDTVEYTYAVPCDHAGGHHWXXXXXXXXXALQLGGGAAGLLIIEPGPREASTIPAAFSTMPEQHMIIYD---FDLKTLANVADGSGDPIFAAPDGGAAQTFAMVNGCGKVPTFQIEAGQWTKLRILNVGATYNVALTLAP--PAAGILPCDVMLIAKDGVPVNDAPRAV-AKNMMFMSLASRLEVAVRCPIATLP-------AAPHLFTYQHFGAAGLEKPP------TIATVTVVASYRDAAPDLPPLAPCRATYLTSSAAVPLLQRDAPFQIAMRGDGINSEKFTGEAEDFHTFILDKPQRWTVAGSFQHPVHVHVNHMEIAAVTPDNDIDGIPEWNVVGDWIDTLAVPNGVDVYVRAERFTGKMMIHCHIAQHSD-LGVTKVMNIVPNPAAIAPLAAAPIAAGGPADIQVA-DWGTCPALIPASTPFNVGAPAAVPGV---IQAEEFDLGGEGIAYHN--------INLDRGAPPAMRAGEASVEID-TIAVGKAQVTAVGYIRDGEWLKYSVNIAAAGFYTASLTVAAAPAPLLTPLGMHWSLWLDVDGG--CPAPGTPGKLLTVADDKWNGTG--GALVFAAYDAPGFMRI---LAPGPHTITLCFEGNAG-FELDSLTI 988
BLAST of jgi.p|Trimin1|163635 vs. uniprot
Match: A0A836CK08_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK08_9STRA) HSP 1 Score: 455 bits (1171), Expect = 3.460e-142 Identity = 301/718 (41.92%), Postives = 380/718 (52.92%), Query Frame = 1 Query: 4 PELPWVRND---YAGTYDADLFFGAGQEGTPYVHIRTRAYNGMVPGPLIRMKACRNYRITVHNMLAEYPAGKTGTGSGQ-----YDPTWTNLHLHGLHVSGDAPSDDVVTVNIKPGLSFTYTYRIPCDHAGGTNWYHPHKRGSTALQADGGAAGMVIIEGSVREAANTPVAYGTVPEHMLVVQEIVPYGANELVENAAAAEDQ---LLIVTTNTRASYWNGMTVKVEANLWQRVRILNVATTYNTVLTITPVNPVGGAPCSVVLLAKDGVFVASMPRSVPAEQSIFLSLSSRVDLAIRCPAAVSTRANAGKIVAEHHI-RYRHIKHNGVAELPDTDIITTIANIVVYSSARPVAPNLPVWQPCRPAYLTKL-AAPSGSPRPVAAIAVA-ALDGV----------PLTLGSTVQWDVSFSFLHPLHTHVNHMQLGPVTAANQWSSLPGWNVAGDWIDTLAAPGTVPVYIRPERYTGKMVVHCHVAYHADSLGMTAAMAISGSGDGPNDIPVVTNFGTCITAPPKNQPYTTNAPFAITSFGAKMLAYKFHRGGEGIAYKNYNIGRRAILNLDRINTGI-VRNDGASVEIDYSSAFGRYFVTRVRNAEWMLYTVNIQTAGVYSAALHVAA--PFREDQAPITMNWSLWLDPSSGSGCPHPGSSA---LLVRVRDDGWKGTGP-TAPAPIRAHPEAVVSRLKFNLPAGVHTLSLCFEGSAGG 2064 PEL W RND Y GT D+ + G +RTRA+NGM+PGPL+RM+ C Y +TV N L +PA + +DP TN+H+HGLHVSG+AP DDV V I+PG + YTY IPCDHA GTNWYHPH GS ALQ GGAAGM++IE S REA TP +PE +V+QEI P LL+V A ++VEA W ++ ILNV YN V T+ G A C VVLL KDG VA PR++P ++ +FLS+SSRV +A+RCP EHHI Y I A P + IVV SAR AP+LP+W PCRPAYLT L P S + + V +L+G L +G W VS +HPLH HVN MQ G TA NQW +PGWN GDW+DTL+APG VYI+PER+ G MV+HCH+A H+D +G+ A I+G G G D P VT+FGTC + PY +A + A +F RGGEGIAY N N R N R TG+ VR G + +V V+ EW+ Y+V++ AG Y+ L A P + ++WSLWLD +G GCP P + A L+ V D + G+G T AP R F LP G H L+LCF+ S G Sbjct: 529 PELQWTRNDDGSYEGTLTLDVVMLETERGA----VRTRAWNGMIPGPLMRMQPCGTYHLTVKNALKGWPAPPPRIAAAAQLNSVHDPLVTNVHVHGLHVSGEAPGDDVFGV-IEPGDAAMYTYTIPCDHASGTNWYHPHHHGSVALQTGGGAAGMLVIEPSAREALGTPAEIAALPEQFVVIQEIDPAXXXXXXXXXXXXXXDVPPLLMVNGCADAP----AQMRVEAGQWTKLHILNVGVAYNAVATLVAAAD-GVAACDVVLLGKDGAPVADAPRALP-DRKLFLSVSSRVTIAVRCPTQW-----------EHHILTYERIGAPPSAAAPR---VAHPLTIVVAPSARDAAPDLPLWSPCRPAYLTDLYTLPPTSLAKLYPLDVRESLNGAVFVGPDEYFTELPIGVAQPWSVSGDDIHPLHVHVNKMQWGADTAGNQWDQVPGWNAPGDWVDTLSAPGISVVYIKPERFLGPMVMHCHIAEHSD-MGLLAVAKITGIGSGALDPPGVTDFGTCPADLRDSTPYGLDA----VQIPGTIQAEEFDRGGEGIAYHNVNDDRLQ-GNALRAVTGVEVRASGTTA-----------WVEGVKATEWLRYSVSVAAAGAYTVTLSAGALTPLKRG-----LSWSLWLDVPAGQGCP-PRAQADGRLIAAVGADDFVGSGALTTFAPY-------TPRAAFVLPLGAHALTLCFDESYDG 1191
BLAST of jgi.p|Trimin1|163635 vs. uniprot
Match: A0A836CQZ2_9STRA (Cupredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CQZ2_9STRA) HSP 1 Score: 440 bits (1131), Expect = 6.060e-141 Identity = 295/758 (38.92%), Postives = 399/758 (52.64%), Query Frame = 1 Query: 1 MPELPWVRNDYAGTYDADLFFGAGQ------------EGTPYVHIRTRAYNGMVPGPLIRMKACRNYRITVHNMLAEYPAGKTGTGSGQYDPTWTNLHLHGLHVSGDAPSDDVVTVNIKPGLSFTYTYRIPCDHAGGTNWYHPHKRGSTALQADGGAAGMVIIEGSVREAANTPVAYGTVPEHMLVVQEIVPYGANELVENAAAAEDQLLIVTTN-----------------------TRASYWNGMTVKVEANLWQRVRILNVATTYNTVLTITPVN-PVGGA-PCSVVLLAKDGVFVASMPRSVPAEQS-IFLSLSSRVDLAIRCPAAVSTRANAGKIVAEHHIRYRHIKHNGVAELPDTDIITTIANIVVYSSARPVAPNLPVWQPCRPAYL---TKLAAPSGSPRPVAAIAVAAL------DGVPLTLGSTVQWDVSFSFLHPLHTHVNHMQLGPVTA-ANQWSSLPGWNVAGDWIDTLAAPG-TVPVYIRPERYTGKMVVHCHVAYHADSLGMTAAMAISGSGD---GPNDIPVVTNFGTCITAPP--KNQPYTTNAPFAITSFGAKMLAYKFHRGGEGIAYKNYNIGRRAILNLDRINTGIVRNDGASVEIDYSSAFGRYFVTRVRNAEWMLYTVNIQTAGV--YSAALHVAAPFREDQAPIT----MNWSLWLDPSSGSGCPHPG--SSALLVRVRDDGWKGTGPTAPAPIRAHPEAVVSRLKFNLPAGVHTLSLCFEGSAGGFELYYLEV 2088 M EL W D G Y+ +L GA P + T A+NGM+PGPLIR KAC Y++ + N L T T +TNLHLHG+HVSG+ P+DDVVTV + PG Y+YRIPCDHA GT+ YHPH G+TA+QA GGA GM+I+EGS EAA+TP Y ++PE+ LV+QE+ +L E A + ++ T N + +S +NGMT KVEA W ++RILNVA N ++T+ P + P+ PC V +LAKDGV V +MPR+V +++ +F SL+SR+D+A+ A AG A+ ++ T IA+I+V +S R A +L PCRP YL + + +P P + A+ G + +W++ SF HP HTHVNHM+LG V NQ P WN GDWIDT+A PG ++PV +RPERY GKMV+HCHV HAD GM A I+ GP D P + + GTC P K PY +APF +++ GA + A F RGGEGIAY N NI L+ + +R+D A+VE+DY V +RN EW+ YT+++ G Y A++ A + + M++SLWLD + GCP PG S L V D W G R P LKF++P G HT++LCFEGS G L+YL + Sbjct: 39 MSELVWTH-DIDGIYNGELTLGAVNLQMTPNRVVSPANPEPSASLDTFAFNGMIPGPLIRFKACNTYKLRLVNGLVPIAGEATTT------IPYTNLHLHGMHVSGEDPADDVVTVQVPPGGDHYYSYRIPCDHASGTHLYHPHFAGTTAMQALGGAVGMIIVEGSALEAAHTPGQYESMPEYPLVIQEM---DLQKLKEYAGEYQLLAVVATANFPDAPPSTVLVNGCERRLGAPSTSPSSPFNGMTFKVEAGQWTKLRILNVANDKNAIITVMPSDYPLKTHWPCEVKVLAKDGVTVDNMPRTVYGQENGLFASLASRIDVAL---------AFAGATAAD--------------DVAMQQTQTVIASIIVTTSNRAWADDLARHYPCRPVYLDLNSGVRTVYPAPEPAFDLVAPAIAVQWPNSGRQFQIDHLEKWNLRASFDHPFHTHVNHMRLGDVNDDVNQVPGAPFWNNEGDWIDTVAIPGDSIPVTLRPERYAGKMVLHCHVQKHADG-GMAAVANIAHHFQDYTGPLDDPTMYDSGTCCCPPADTKRTPYN-DAPFFVSTGGATIPAVFFDRGGEGIAYHNLNIAPHKPTYLELTSLPPIRDDDAAVEMDYDPLLKDNHVAFIRNGEWLKYTISVYPPGGSWYKASIGAALVLPPNGFVVGHGPGMHYSLWLD-NDQDGCPAPGQTSKGWLATVNDSEWAGARVD-----RIQPYPADGTLKFHIPQGEHTVTLCFEGSVGHLNLFYLHL 755
BLAST of jgi.p|Trimin1|163635 vs. uniprot
Match: A0A835ZH56_9STRA (CBM6 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH56_9STRA) HSP 1 Score: 441 bits (1134), Expect = 7.280e-139 Identity = 288/724 (39.78%), Postives = 381/724 (52.62%), Query Frame = 1 Query: 1 MPELPWVRNDYAGTYDADLFFGAGQEGTPYVHIRTRAYNGMVPGPLIRMKACRNYRITVHNMLAEYPAG---KTGTGSGQYDPTWTNLHLHGLHVSGDAPSDDVVTVNIKPGLSFTYTYRIPCDHAGGTNWYHPHKRGSTALQADGGAAGMVIIEGSVREAANTPVAYGTVPEHMLVVQEIVPYGANELVENAAAAEDQLLIVTTNTRASYWNG-----MTVKVEANLWQRVRILNVATTYNTVLTI-------TPVNPVGGAPCSVVLLAKDGVFVASMPRSVPAEQSIFLSLSSRVDLAIRCPAAVSTRANAGKIVAEHHIRYRHIKHNGVAELPDTDIITTIANIVVYSSARPVAPNLPVWQPCRPAYLTK--LAAPSGSPRPVAAIAVAALDG----------VPLTLGSTVQWDVSFSFLHPLHTHVNHMQLGP-VTAANQWSSLPGWNVAGDWIDTLAAPGTVPVYIRPERYTGKMVVHCHVAYHADSLGMTAAMAISGSGDGPNDIPVVTNFGTCITAPPKNQPYTTNAPFAITSFGAKMLAYKFHRGGEGIAYKNYNIGRRAILNLDRINTGIVRNDGASVEIDYSSAFGRYFVTRVRNAEWMLYTVNIQTAGVYSAALHVAAPFREDQAPIT-MNWSLWLD----PSSGSGCPHPGSSALLVRVRDDGWKGTGPTAPAPIRAHPEAVVSRLKFNLPAGVHTLSLCFEGSAGGFEL 2073 MPE W R G+Y L FGA + T +RT YNG+ PGP++RM+AC Y +T+ N L +P G + G +G++DPT TN+HLHG+H+SG AP DDV I G Y Y +PCDH GGTNWYHPH G ALQ+ GA GM+I+E + REA + P +PE +V+QEI P L A AA+DQL + NG + + VEA W RV ILN A +N+ LTI P P A C V+LL KDGV+VA PR+VP + ++F+S+SSR+D+A+RCP AGK H + HI E P + I V S R A +LP W PCRPAYL A P P+ +A + G + LG QW + S LHP H HVNHMQLGP + AN W +PGW GD+IDT++A G +PV++RPER+ G MV+HCH+A H+D+ G+ I G+G P V +FGTC A P + PY P A+ + A F +GGEG+AY N N+ R N G A+VE+D A FV +R+ EWM Y+VN+ A Y + A AP+ M ++LW+D P++G P PG A+ V V D + GTG + I P V ++ LPAG H L+LCF+ L Sbjct: 265 MPEFQWARQA-DGSYAGVLEFGAVEIATATGTMRTVGYNGLQPGPIMRMQACGVYHLTLKNTLEGWPEGIGPEAGV-NGEHDPTVTNIHLHGMHISGMAPGDDVFAA-IAAGEEQEYVYTVPCDHTGGTNWYHPHHHGIVALQSGTGAMGMLIVESNPREAQDMPPEIQMMPEQFIVIQEIDPIA---LQTYADAAKDQLFQTDIAQAFTLVNGCDAGDVEMTVEAGQWVRVHILNHANAFNSALTIKAAVAGAAPAAP-AAAQCDVLLLGKDGVWVADAPRAVP-DNNMFVSISSRLDIALRCP-------TAGKA---HTLAMMHINDPAAPEAP-----VPLVTITVVPSLRDAADDLPAWGPCRPAYLPADISALPEVVPKTLALEVREGVGGQVFSSVDNYVTEIGLGFAQQWTIQGSDLHPFHIHVNHMQLGPTIGPANNWPDVPGWFQPGDYIDTISALGNLPVFMRPERFVGPMVMHCHIAQHSDN-GVIGIANILGNGADGEAPPTVVDFGTCPAALPASTPYLP-LPAAVPGV---IQAENFDKGGEGVAYHNKNVDR---------NQGNAARLDAAVEVDTLPALQTTFVGLIRSGEWMRYSVNVAAAAYYQMTVTAATA-----APLNGMAFTLWVDVEGCPAAGQAVPAPG--AMAVNVADAAYAGTG----SYIVFAPYVVQQPVQ--LPAGAHVLTLCFDAGDAAINL 938
BLAST of jgi.p|Trimin1|163635 vs. uniprot
Match: A0A835YVH6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH6_9STRA) HSP 1 Score: 411 bits (1056), Expect = 3.850e-124 Identity = 281/734 (38.28%), Postives = 374/734 (50.95%), Query Frame = 1 Query: 4 PELPWVRNDYAGTYDADLFFGAGQEGTPYVHIRTRAYNGMVPGPLIRMKACRNYRITVHNMLAEYP-AGKTGTGSGQYDPTWTNLHLHGLHVSGDAPSDDVVTVNIKPGLSFTYTYRIPCDHAGGTNWYHPHKRGSTALQADGGAAGMVIIEGSVREAANTPVAYGTVPEHMLVVQEIVPYGANELVENAAAAEDQLLIVTTNTRASYWNGMT----VKVEANLWQRVRILNVATTYNTVLTITPVNPVGGAPCSVVLLAKDGVFVASMPRSVPAEQSIFLSLSSRVDLAIRCPAAVSTRANAGKIVAEHHIRYRHIKHNGVAELPDTDIITTIANIVVYSSARPVAPNLPVWQPCRPAYLTKL--AAPSGSPRPVAAIAVAALDG----------VPLTLGSTVQWDVSFSFLHPLHTHVNHMQLGP-VTAANQWSSLPGWNVAGDWIDTLAAPGTVPVYIRPERYTGKMVVHCHVAYHADSLGMTAAMAISGSGDGPNDIPVVTNFGTCITAPPKNQPYTT---NAPFAI-----------TSFGAKML------------AYKFHRGGEGIAYKNYNIGRRAILNLDRINTGI--VRNDGASVEIDYSSAFGRYFVTRVRNAEWMLYTVNIQT--AGVYSAALHVAAPFREDQAPITMNWSLWLDPSSGSGCPHPGSSA--LLVRVRDDGWKGTGPTAPAPIRAHPEAVVSRLKFNLPAGVHTLSLCFEGS 2055 PEL W R G+Y+ DL G T +RTRA+NGM+PGPL+RM+ C Y I V N AE+P + + PT TNLH+HGLHVSG++P DD V I+PG + YT +PCDH+ G+NWYHPH GS A+Q +GGAAG++++ S EA+ TP +PE + VQEIVP +L + A AA D + NG + +EA W R+ +LNVA +N+V +T KDGV V+ PR+V +F+S++SR+D+A+RCPAA A AG A + Y I + P +A I V SAR AP+LP W PCRPAYL AAP + R V L+G + LTLG W VS + +HPLH HVNHMQ+G VT NQW +P W+ AGDW+D L+ VY+RP ++G MV+HCH+A H+D LG+ I+G G GP D P VTN GTC P + P+ N P I TS L A F GGEGIAY N+N A N R NT + V A+ + +VT +R EW+ ++VN+ AG Y+ L +AA P+ + ++LWLD +GCP P A LV + D + G+G A A F LP G H L+LCF+G+ Sbjct: 577 PELGWRRRA-DGSYEGDLTLGVVNVATAAGTMRTRAWNGMIPGPLMRMEPCGVYHINVFNDQAEFPDTARDYALNTMGAPTHTNLHVHGLHVSGESPGDDSF-VTIEPGATQQYTIAVPCDHSSGSNWYHPHHHGSVAIQTEGGAAGLLVVGPSPTEASGTPNDIQALPEQFIAVQEIVPA---KLTQYAGAAHDTVFATNITDPFLLVNGCAAPAPITLEAGQWTRLHLLNVALEFNSVFALT---------------TKDGVPVSDAPRAVD-NNLMFMSIASRLDVAVRCPAA----AAAGPAYA---LTYAQIGNAAAPAAPQV-----LAAISVVVSARAAAPDLPAWNPCRPAYLMDAYNAAPGNTDRLVPLDVRNNLNGYVFKGPGDYFMQLTLGRVQPWSVSGADVHPLHIHVNHMQIGAEVTDDNQWLEVPNWSRAGDWVDVLSQRNGAIVYVRPVTFSGPMVMHCHIAEHSD-LGVIGVAKINGQGQGPVDSPAVTNHGTCPKDVPLSTPFKNTHANVPGIIQAEHFDNKERVTSHKWSPLLTPPSCPLRNSQAEHFDNGGEGIAYHNFNTDTNAAANPLRPNTAVETVIIPTAAPAAAAPAPPAAAYVTAIRGGEWLRWSVNVPAPNAGGYALTLSIAAA-----TPVPLEFTLWLD---SAGCP-PSEQAEGRLVALSDANYGGSGGAA-----AFAPYAPQGQPFALPPGPHALTLCFDGA 1262
BLAST of jgi.p|Trimin1|163635 vs. uniprot
Match: A0A835ZAX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAX7_9STRA) HSP 1 Score: 395 bits (1016), Expect = 5.650e-122 Identity = 273/710 (38.45%), Postives = 371/710 (52.25%), Query Frame = 1 Query: 1 MPELPWVRNDYAGTYDADLFFGAGQEGTPYVHIRTRAYNGMVPGPLIRMKA---CRNYRITVHNMLAEYPAGKTGTGSGQYDPTWTNLHLHGLHVSGDAPSDDVVTVNIKPGLSFTYTYRIPCDHAGGTNWYHPHKRGSTALQADGGAAGMVIIEGSVREAANTPVAYGTVPEHMLVVQEIVPYGANELVENAAAAEDQLLIVTTNTRASYWNG---MTVKVEANLWQRVRILNVATTYNTVLTITPVNPVGGAPCSVVLLAKDGVFVASMPRSVPAEQS--IFLSLSSRVDLAIRCPAAVSTRANAGKIVAEHHIRYRHIKHNGVAELPDTDIITTIANIVVYSSARPVAPNLPVWQPCRPAYLTKLA-APSGSPRPVAAIAVAA-LDG----------VPLTLGSTVQWDVSFSFLHPLHTHVNHMQLGPVTAANQWSSLPGWNVAGDWIDTLAAPGTVPVYIRPERYTGKMVVHCHVAYHADSLGMTAAMAISGSGDGPNDIPVVTNFGTCITAPPKNQPYTTNAPFAITSFGAKMLAYKFHRGGEGIAYKNYNIGRRAILNLDRINTGIVRNDGASVEI---DYSSAFGRYFVTRVRNAEWMLYTVNIQTAGVYSAALHVAAPFREDQAPITMNWSLWLDPSSGSGCPHPGSSA-LLVRVRDDGWKGTGPTAPAPIRAHPEAVVSRLKFNLPAGVHTLSLCFEGSA 2058 MPE W +N GTY+ L GA + T +R AYNGM+PGP++RMKA C Y + V N LA +PA + G + +DPT TNLHLHGLHVSG AP DDV ++ I+PG + YTY +PCDH+ GTNWYHPH GS+ALQ GGA G+++IE S RE A+ P AY +P LV Q+ P + +A + D + + NG + + VE W R+ +LN YN++++ P C+V LL KDG ++A +PR + +++ +F SL+SRVD I CP A H I Y HI P + T+ I V S RP A LPVW+PCRPAYL L P A+ V L+G +T+ QW V + HPLH HVNHMQLG +T ANQW PGW+V GD+IDTL+A VPV + PER+ G M +HCHV HAD LG+ + I G GD P + ++G+C P ++PY A I G + A +F +GG G+AY N +N ++ +R+D VEI + G Y VT +R EW+ YTV++Q G Y+ A+ ++ ++M L+ D CP P + LL R++D + GTG A R KF+ G H L LCF+ A Sbjct: 253 MPEFEWHQNG-DGTYEGTLTLGAVELHTSKGFMRMFAYNGMLPGPIMRMKASGTCGKYTLNVINDLARWPAPEGGMINTLHDPTVTNLHLHGLHVSGMAPGDDV-SIMIEPGQTNKYTYTLPCDHSSGTNWYHPHNHGSSALQTTGGAYGLLVIESSARELADMPAAYAALPAQHLVFQDFNP---PDTASFSAQSGDGVFATDIDGPLILVNGCEQVELVVEEGQWTRLNMLNSGHIYNSLVSFCP-QATDAEDCTVGLLQKDGAWLAQVPRMLEKKRANKLFFSLASRVDAVIMCPTAG----------VPHTITYSHIVD------PTWEGPVTVGTIRVVPSLRPAAKALPVWEPCRPAYLMDLNDMPDKKLGDAFALEVRTQLNGQLFTGPEDYLATMTVNKPQQWLVIGTDQHPLHIHVNHMQLGDITKANQWDEAPGWHVTGDFIDTLSAKAQVPVRVNPERFIGPMFLHCHVPSHAD-LGVLGVIDIRGKGDDGEASPEIEDYGSCTKDIPNSKPYGEKA---IRVPGI-VQAEEFDKGGAGVAYYN--------INGAPLSAPPMRDD-EPVEIMPVQHGGVAG-YGVTGIRAGEWLRYTVDVQRKGHYNVFFVQAS--KDLLQGVSMR--LYKDAKE---CPKPSETKNLLARIKDTTYTGTGDIHDFVSLASNR----RAKFD-STGKHKLLLCFDAGA 913
BLAST of jgi.p|Trimin1|163635 vs. uniprot
Match: A0A835YUJ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUJ5_9STRA) HSP 1 Score: 328 bits (842), Expect = 7.460e-98 Identity = 219/542 (40.41%), Postives = 289/542 (53.32%), Query Frame = 1 Query: 1 MPELPWVRN---DYAGTYDADLFFGAGQEGTPYVHIRTRAYNGMVPGPLIRMKACRNYRITVHNMLAEYPAG----KTGTGSGQYDPTWTNLHLHGLHVSGDAPSDDVVTVNIKPGLSFTYTYRIPCDHAGGTNWYHPHKRGSTALQADGGAAGMVIIEGSVREAANTPVAYGTVPEHMLVVQEIVPYGANELVENAAAAEDQLLIVTTNTRA-SYWNGMT-------VKVEANLWQRVRILNVATTYNTVLTITPVNPVGGAPCSVVLLAKDGVFVASMPRSV-----------PAEQ-SIFLSLSSRVDLAIRCPAAVSTRANAGKIVAEHHIRYRHIKHNGVAE--LPDTDIITTIANIVVYSSARPVAPNLPVWQPCRPAYLTKLAAPSGSPRPV---------------AAIAVAALDGVPLT---LGSTVQWDVSFSFLHPLHTHVNHMQLGPVTAANQWSSLPG-WNVAGDWIDTLAAPGTVPVYIRPERYTGKMVVHCHVAYHADSLGMTAAMAISGSGDGPNDIPVVTNFGTC 1482 MPEL W ++GT + GT I TR +NGMVPGP+IRM+AC Y++ + N A +PAG + G +G +DPT TNLHLHGLH+SG AP D + T+ ++ G YTY IPC+HA GT WYHPH GSTALQADGGAAGM+I+EG+ RE+A P AY +PE +LVVQ+I + L A + D L + + + NG V + A W ++R+LNV T YN+VL+I P P PC V LLAKDGV+++ PR + PA S+F SLSSRVD+AIRCPAA H I + I L DT TIA I V ++A AP LP +PCRP YL + P+ + V A+ D P+T LG QW + S HP H HVNHM L W + W++ GDW+D+++ G PV IRP+ ++G MV+HCH+A HAD +G+ I G D+ V ++GTC Sbjct: 297 MPELEWTEQADGSFSGTLELSAVEMVKGGGT----IVTRGFNGMVPGPVIRMQACNTYKLRLVNDQAGWPAGLNADQIGGVNGFHDPTVTNLHLHGLHISGMAPGDSMDTL-LEAGEMNVYTYTIPCEHASGTFWYHPHGHGSTALQADGGAAGMLIVEGAPRESAKFPPAYNAMPEQLLVVQDI---NTDLLGRLAGYSGDSLFSKSPMMKPFTMVNGCDPADAPADVALAAGQWTKLRMLNVGTQYNSVLSIVPAVPAAD-PCDVQLLAKDGVWLSDAPRVITPLDNAINFKLPANALSLFFSLSSRVDVAIRCPAA-----------GMHKIVQQRINDPSCLPGCLKDTYQHPTIATITVGAAAGAPAPALPKLKPCRPGYLMDIV-PTAATEQVDLTIRVDGFSVNNLPGALYTGVADAAPMTTMTLGQPYQWVIDGSANHPFHAHVNHMMLS--VDIQPWDQVQANWHMPGDWLDSISVQGQAPVLIRPDHFSGPMVMHCHIAAHAD-MGLMGFSTIEGK-----DV-VAEDWGTC 808 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163635 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1885 ID=mRNA_1885|Name=jgi.p|Trimin1|163635|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2103bp|location=Sequence derived from alignment at Contig_26:402062..404314+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGCCGGAGCTCCCGTGGGTGAGAAACGATTATGCTGGCACCTACGATGCback to top protein sequence of jgi.p|Trimin1|163635 >Trimin1|163635|e_gw1.26.162.1 ID=Trimin1|163635|e_gw1.26.162.1|Name=jgi.p|Trimin1|163635|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=701bp MPELPWVRNDYAGTYDADLFFGAGQEGTPYVHIRTRAYNGMVPGPLIRMKback to top mRNA from alignment at Contig_26:402062..404314+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1885 ID=mRNA_1885|Name=jgi.p|Trimin1|163635|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2253bp|location=Sequence derived from alignment at Contig_26:402062..404314+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_26:402062..404314+ >mRNA_1885 ID=mRNA_1885|Name=jgi.p|Trimin1|163635|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2103bp|location=Sequence derived from alignment at Contig_26:402062..404314+ (Tribonema minus UTEX_B_3156 )back to top |