mRNA_18799 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|354607 vs. uniprot
Match: A0A835YXW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXW7_9STRA) HSP 1 Score: 1245 bits (3221), Expect = 0.000e+0 Identity = 671/671 (100.00%), Postives = 671/671 (100.00%), Query Frame = 1
Query: 1 MSCANDGTFTVIVAGDENEYIYTVSCDHSGGTNWYHPHFHGSSALQTNGGAAGMLIIEPGVRESADTPMLYQSLPEQYLIIQXXXXXXXXXXXXXXXXXXXXDFSVQDLTAYSLMSGDAVFDTNIQDPFATVNGCTGGSQVINVEAGQWTRLRTLHSGNLYNAIVTIEPAAAGANTPLCDVVLLQKDGAWLGTVPRTVQGTAPGEAPALFFTPSSRNDVAVRCAGAGAKHEIRYAQVNNALRADPEVIATLEVSPSTRPPAADLPQWSPCRPAYLQDLTGLTPQQLGNAYPIELRQTINNAQFSGPEDYMHELELAVPEQWLVTGTDLHPLHVHVNHFQIGKVTAANQWAEAPEWLQEGDYMDSLSAKGSVQLLVRPERFSGVMIIHCHITSHADQGMMAVFNIKGKGADALSPPQVAAGDFGTCPFLVPQSAPFRGTPATIPGVIEAEQFDTGGQNIAYWNDNTDDLAGPVPPRSLEAVEVVASTDGATTSVTSIRAGEWLKYTVNVEQTGTYGLTMFSVRREGSTSSTYALVATLSTGPGRKGVSWSLWSGQRSCPTDPKETTGLVSRVADSNLKLSDDADVYGAYVAPEPAALTAGPQTLLLCFDKDMVNARIDSLALRYCAASAALCAPRLAXXXXXXXXXXXXXXXXXXXXXXXXAVPATEPVPAK 2013
MSCANDGTFTVIVAGDENEYIYTVSCDHSGGTNWYHPHFHGSSALQTNGGAAGMLIIEPGVRESADTPMLYQSLPEQYLIIQXXXXXXXXXXXXXXXXXXXXDFSVQDLTAYSLMSGDAVFDTNIQDPFATVNGCTGGSQVINVEAGQWTRLRTLHSGNLYNAIVTIEPAAAGANTPLCDVVLLQKDGAWLGTVPRTVQGTAPGEAPALFFTPSSRNDVAVRCAGAGAKHEIRYAQVNNALRADPEVIATLEVSPSTRPPAADLPQWSPCRPAYLQDLTGLTPQQLGNAYPIELRQTINNAQFSGPEDYMHELELAVPEQWLVTGTDLHPLHVHVNHFQIGKVTAANQWAEAPEWLQEGDYMDSLSAKGSVQLLVRPERFSGVMIIHCHITSHADQGMMAVFNIKGKGADALSPPQVAAGDFGTCPFLVPQSAPFRGTPATIPGVIEAEQFDTGGQNIAYWNDNTDDLAGPVPPRSLEAVEVVASTDGATTSVTSIRAGEWLKYTVNVEQTGTYGLTMFSVRREGSTSSTYALVATLSTGPGRKGVSWSLWSGQRSCPTDPKETTGLVSRVADSNLKLSDDADVYGAYVAPEPAALTAGPQTLLLCFDKDMVNARIDSLALRYCAASAALCAPRLAXXXXXXXXXXXXXXXXXXXXXXXXAVPATEPVPAK
Sbjct: 1 MSCANDGTFTVIVAGDENEYIYTVSCDHSGGTNWYHPHFHGSSALQTNGGAAGMLIIEPGVRESADTPMLYQSLPEQYLIIQXXXXXXXXXXXXXXXXXXXXDFSVQDLTAYSLMSGDAVFDTNIQDPFATVNGCTGGSQVINVEAGQWTRLRTLHSGNLYNAIVTIEPAAAGANTPLCDVVLLQKDGAWLGTVPRTVQGTAPGEAPALFFTPSSRNDVAVRCAGAGAKHEIRYAQVNNALRADPEVIATLEVSPSTRPPAADLPQWSPCRPAYLQDLTGLTPQQLGNAYPIELRQTINNAQFSGPEDYMHELELAVPEQWLVTGTDLHPLHVHVNHFQIGKVTAANQWAEAPEWLQEGDYMDSLSAKGSVQLLVRPERFSGVMIIHCHITSHADQGMMAVFNIKGKGADALSPPQVAAGDFGTCPFLVPQSAPFRGTPATIPGVIEAEQFDTGGQNIAYWNDNTDDLAGPVPPRSLEAVEVVASTDGATTSVTSIRAGEWLKYTVNVEQTGTYGLTMFSVRREGSTSSTYALVATLSTGPGRKGVSWSLWSGQRSCPTDPKETTGLVSRVADSNLKLSDDADVYGAYVAPEPAALTAGPQTLLLCFDKDMVNARIDSLALRYCAASAALCAPRLAXXXXXXXXXXXXXXXXXXXXXXXXAVPATEPVPAK 671
BLAST of jgi.p|Trimin1|354607 vs. uniprot
Match: A0A835Z8B6_9STRA (Plastocyanin-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8B6_9STRA) HSP 1 Score: 550 bits (1416), Expect = 7.320e-183 Identity = 284/427 (66.51%), Postives = 323/427 (75.64%), Query Frame = 1
Query: 16 DGTFTVIVAGDENEYIYTVSCDHSGGTNWYHPHFHGSSALQTNGGAAGMLIIEPGVRESADTPMLYQSLPEQYLIIQXXXXXXXXXXXXXXXXXXXXDFSVQDLTAYSLMSGDAVFDTNIQDPFATVNGC---TGGSQVINVEAGQWTRLRTLHSGNLYNAIVTIEPAAAGAN-----------TPLCDVVLLQKDGAWLGTVPRTVQGTAPGEAPALFFTPSSRNDVAVRCAGAGAKHEIRYAQVNNALRADPEVIATLEVSPSTRPPAADLPQWSPCRPAYLQDLTGLTPQQLGNAYPIELRQTINNAQFSGPEDYMHELELAVPEQWLVTGTDLHPLHVHVNHFQIGKVTAANQWAEAPEWLQEGDYMDSLSAKGSVQLLVRPERFSGVMIIHCHITSHADQGMMAVFNIKGKGADALSPPQVA 1254
D TFTV+ AG ENE+IYT+ CDHSGGTN SALQTNGGAAGML+IEPG RE AD P+ Y+SLPEQYL+IQ DFSV+DLT YSL+SGDAVFDT+I D FA NGC +GG+Q I V AGQWTRLR LH+G+ NA++TIEPAAA P CD+VLLQKDGAWLG+VPRTV+G APG APALFFTPSSRNDVA+RCA AG +HEIRY QVNN+LR D EVI T+ V+P RPPA DLP+W PCRPAYL+DLT LTP+QLG AYP+ELRQTIN AQF GP+ MHEL L VPEQWLVTGTD HPLHVH IG V+A NQW +AP+WL GD+MDSLSA+G V +LV PERFSG M+IHCHITSHADQGMMAVF IKG+GADAL+PPQ+A
Sbjct: 106 DDTFTVVEAGGENEFIYTIPCDHSGGTN--------CSALQTNGGAAGMLVIEPGEREIADMPVAYRSLPEQYLVIQ--------------------DFSVKDLTTYSLVSGDAVFDTDIPDTFAAANGCAQRSGGAQ-ITVAAGQWTRLRMLHAGSAQNAVITIEPAAAXXXXXXXXXXXXXAVPRCDMVLLQKDGAWLGSVPRTVRGAAPGGAPALFFTPSSRNDVAIRCADAGVEHEIRYTQVNNSLRPDAEVIGTVTVTPDARPPAPDLPEWGPCRPAYLKDLTVLTPEQLGAAYPLELRQTINGAQFEGPDVIMHELTLGVPEQWLVTGTDQHPLHVH-----IGGVSAENQWDDAPDWLVVGDWMDSLSARGRVPILVHPERFSGPMVIHCHITSHADQGMMAVFTIKGRGADALTPPQLA 498
BLAST of jgi.p|Trimin1|354607 vs. uniprot
Match: A0A835ZAX7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAX7_9STRA) HSP 1 Score: 478 bits (1229), Expect = 1.230e-149 Identity = 263/631 (41.68%), Postives = 360/631 (57.05%), Query Frame = 1
Query: 16 DGTFTVIVAGDENEYIYTVSCDHSGGTNWYHPHFHGSSALQTNGGAAGMLIIEPGVRESADTPMLYQSLPEQYLIIQXXXXXXXXXXXXXXXXXXXXDFSVQDLTAYSLMSGDAVFDTNIQDPFATVNGCTGGSQVINVEAGQWTRLRTLHSGNLYNAIVTIEPAAAGANTPLCDVVLLQKDGAWLGTVPRTVQGTAPGEAPALFFTPSSRNDVAVRCAGAGAKHEIRYAQVNNALRADPEVIATLEVSPSTRPPAADLPQWSPCRPAYLQDLTGLTPQQLGNAYPIELRQTINNAQFSGPEDYMHELELAVPEQWLVTGTDLHPLHVHVNHFQIGKVTAANQWAEAPEWLQEGDYMDSLSAKGSVQLLVRPERFSGVMIIHCHITSHADQGMMAVFNIKGKGADALSPPQVAAGDFGTCPFLVPQSAPFRGTPATIPGVIEAEQFDTGGQNIAYWNDNTDDLAGPVPPRSLEAVEVVASTDGATTS--VTSIRAGEWLKYTVNVEQTGTYGLTMFSVRREGSTSSTYALVATLSTGPGRKGVSWSLWSGQRSCPTDPKETTGLVSRVADSNLKLSDDADVYGAYVAPEPAAL-TAGPQTLLLCFDKDMV--NARIDSLALRYCAASAALC 1893
D +I G N+Y YT+ CDHS GTNWYHPH HGSSALQT GGA G+L+IE RE AD P Y +LP Q+L+ Q DF+ D ++S SGD VF T+I P VNGC V+ E GQWTRL L+SG++YN++V+ P A A C V LLQKDGAWL VPR ++ + LFF+ +SR D + C AG H I Y+ + + P + T+ V PS RP A LP W PCRPAYL DL + ++LG+A+ +E+R +N F+GPEDY+ + + P+QWLV GTD HPLH+HVNH Q+G +T ANQW EAP W GD++D+LSAK V + V PERF G M +HCH+ SHAD G++ V +I+GKG D + P++ D+G+C +P S P+ +PG+++AE+FD GG +AY+N N L+ P P R E VE++ G VT IRAGEWL+YTV+V++ G Y + ++ L+ +GVS L+ + CP P ET L++R+ D+ + D + + + A + G LLLCFD +D++ LRYC +A C
Sbjct: 353 DDVSIMIEPGQTNKYTYTLPCDHSSGTNWYHPHNHGSSALQTTGGAYGLLVIESSARELADMPAAYAALPAQHLVFQ--------------------DFNPPDTASFSAQSGDGVFATDIDGPLILVNGCEQVELVV--EEGQWTRLNMLNSGHIYNSLVSFCPQATDAED--CTVGLLQKDGAWLAQVPRMLEKKRANK---LFFSLASRVDAVIMCPTAGVPHTITYSHIVDPTWEGPVTVGTIRVVPSLRPAAKALPVWEPCRPAYLMDLNDMPDKKLGDAFALEVRTQLNGQLFTGPEDYLATMTVNKPQQWLVIGTDQHPLHIHVNHMQLGDITKANQWDEAPGWHVTGDFIDTLSAKAQVPVRVNPERFIGPMFLHCHVPSHADLGVLGVIDIRGKGDDGEASPEIE--DYGSCTKDIPNSKPYGEKAIRVPGIVQAEEFDKGGAGVAYYNINGAPLSAP-PMRDDEPVEIMPVQHGGVAGYGVTGIRAGEWLRYTVDVQRKGHYNVFFVQASKD--------LL---------QGVSMRLYKDAKECPK-PSETKNLLARIKDTTYTGTGDIHDFVSLASNRRAKFDSTGKHKLLLCFDAGAFPRGLVLDAVTLRYCGKTAKEC 935
BLAST of jgi.p|Trimin1|354607 vs. uniprot
Match: A0A835ZH56_9STRA (CBM6 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH56_9STRA) HSP 1 Score: 447 bits (1151), Expect = 9.910e-138 Identity = 252/637 (39.56%), Postives = 341/637 (53.53%), Query Frame = 1
Query: 16 DGTFTVIVAGDENEYIYTVSCDHSGGTNWYHPHFHGSSALQTNGGAAGMLIIEPGVRESADTPMLYQSLPEQYLIIQXXXXXXXXXXXXXXXXXXXXDFSVQDLTAYSLMSGDAVFDTNIQDPFATVNGCTGGSQVINVEAGQWTRLRTLHSGNLYNAIVTIEPAAAGANTPL-----CDVVLLQKDGAWLGTVPRTVQGTAPGEAPALFFTPSSRNDVAVRCAGAGAKHEIRYAQVNNALRAD-PEVIATLEVSPSTRPPAADLPQWSPCRPAYLQDLTGLTPQQLGNAYPIELRQTINNAQFSGPEDYMHELELAVPEQWLVTGTDLHPLHVHVNHFQIGK-VTAANQWAEAPEWLQEGDYMDSLSAKGSVQLLVRPERFSGVMIIHCHITSHADQGMMAVFNIKGKGADALSPPQVAAGDFGTCPFLVPQSAPFRGTPATIPGVIEAEQFDTGGQNIAYWNDNTDDLAGPVPPRSLEAVEVVASTDGATTSVTSIRAGEWLKYTVNVEQTGTYGLTMFSVRREGSTSSTYALVATLSTGPGRKGVSWSLWSGQRSCPTDPKETTG---LVSRVADSNLKLSDDADVYGAYVAPEPAALTAGPQTLLLCFDKDMVNARIDSLALRYCAASAALCA 1896
D F I AG+E EY+YTV CDH+GGTNWYHPH HG ALQ+ GA GMLI+E RE+ D P Q +PEQ+++IQ L Y+ + D +F T+I F VNGC G + VEAGQW R+ L+ N +N+ +TI+ A AGA CDV+LL KDG W+ PR V +F + SSR D+A+RC AG H + +N+ + P + T+ V PS R A DLP W PCRPAYL P+ + +E+R+ + FS ++Y+ E+ L +QW + G+DLHP H+HVNH Q+G + AN W + P W Q GDY+D++SA G++ + +RPERF G M++HCHI H+D G++ + NI G GAD +PP V DFGTCP +P S P+ PA +PGVI+AE FD GG+ +AY N N D G R AVEV TT V IR+GEW++Y+VNV Y +T+ T A A L+ G++++LW CP + + VAD+ + V+ YV +P L AG L LCFD +DS A C A+AA CA
Sbjct: 364 DDVFAAIAAGEEQEYVYTVPCDHTGGTNWYHPHHHGIVALQSGTGAMGMLIVESNPREAQDMPPEIQMMPEQFIVIQEIDPIA--------------------LQTYADAAKDQLFQTDIAQAFTLVNGCDAGDVEMTVEAGQWVRVHILNHANAFNSALTIKAAVAGAAPAAPAAAQCDVLLLGKDGVWVADAPRAVPDNN------MFVSISSRLDIALRCPTAGKAHTLAMMHINDPAAPEAPVPLVTITVVPSLRDAADDLPAWGPCRPAYLPADISALPEVVPKTLALEVREGVGGQVFSSVDNYVTEIGLGFAQQWTIQGSDLHPFHIHVNHMQLGPTIGPANNWPDVPGWFQPGDYIDTISALGNLPVFMRPERFVGPMVMHCHIAQHSDNGVIGIANILGNGADGEAPPTVV--DFGTCPAALPASTPYLPLPAAVPGVIQAENFDKGGEGVAYHNKNVDRNQGNAA-RLDAAVEVDTLPALQTTFVGLIRSGEWMRYSVNVAAAAYYQMTV-----------TAATAAPLN------GMAFTLWVDVEGCPAAGQAVPAPGAMAVNVADAAYAGTGSYIVFAPYVVQQPVQLPAGAHVLTLCFDAGDAAINLDSFAFAACGATAAACA 954
BLAST of jgi.p|Trimin1|354607 vs. uniprot
Match: A0A835ZCB5_9STRA (CBM6 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCB5_9STRA) HSP 1 Score: 426 bits (1096), Expect = 9.460e-129 Identity = 260/648 (40.12%), Postives = 348/648 (53.70%), Query Frame = 1
Query: 16 DGTFTVIVAGDENEYIYTVSCDHSGGTNWYHPHFHGSSALQTNGGAAGMLIIEPGVRESADTPMLYQSLPEQYLIIQXXXXXXXXXXXXXXXXXXXXDFSVQDLTAYSLMSGDAVFDTNIQDPFATVNGCTG-GSQV------------INVEAGQWTRLRTLHSGNLYNAIVTIEPAAAGANTPLCDVVLLQKDGAWLGTVPRTVQGTAPGEAPALFFTPSSRNDVAVRCAGAGAKHEIRYAQVNN--ALRADPEVIATLEVSPSTRPPAADLPQWSPCRPAYLQDLTGLTPQQLGNAYPIELRQTINNAQFSGPEDYMHELELAVPEQWLVTGTDLHPLHVHVNHFQIGKVTAANQWAEAPEWLQEGDYMDSLSAKGSVQLLVRPERFSGVMIIHCHITSHADQGMMAVFNIKGKGADALSPPQVAAGDFGTCPFLVPQSAPFRGTPATIPGVIEAEQFDTGGQNIAYWNDNTDDLAGPVPPRSLEAVEVVASTD--GATTSVTSIRAGEWLKYTVNVEQTGTYGLTMFSVRREGSTSSTYALVATLSTGPGRKGVSWSLW-SGQRSCPTDPKETTGLVSRVADSNLKLSDDADVYGAYVAPEPA----ALTAGPQTLLLCFDKDMVNARIDSLALRYCAASAALC 1893
D F I+ G E Y Y + CDH GG +WYHPH HG+ ALQT+GGAAG+++IEP RE++ TP Q++PEQYL+IQ + L A++ SGD +FD++I F VNGC+ G+ V INVEAGQWTRLR L+ G+ YN+I+TIEP N C + LL KDG L PR V G A LF + S+R DVA++C AG H + YA V + A A IAT+ V+P RPPA LP W+PCRP YL D + + G + + +R +N +F+ P+ Y+ + E W +TG+D HPLH+HV+H Q+G V NQW AP W GD++DS+SA G+V + +RPER+ G ++HCHI H+D G+MAV ++ G+ A P V ++GTCP P S P+ G A +PG IEAE FD GG+ +AY N N D A P ++ E D GA ++T IR GEWLKYTVNV + GTY + + A G G+ WSLW CP + G + RV D+ + A + AY AP A L AG TL LCF+ N DS + C A+ +C
Sbjct: 487 DNPFVSILPGQEYTYQYRIPCDHIGGLHWYHPHKHGAVALQTHGGAAGLIVIEPMAREASVTPAAIQTMPEQYLMIQ--------------------EIDPPGLQAFATQSGDRIFDSDITAAFTLVNGCSAPGAGVVVKPAMTTALANINVEAGQWTRLRLLNVGHQYNSIITIEPKVL--NGVPCQLGLLAKDGVPLADAPRAVAGNA------LFVSLSTRLDVAIKCFVAGVVHNVAYAHVGDVGAEVAAAPTIATITVTPFLRPPADPLPLWAPCRPGYLTDARKVPRRLRGPPFDLTVRDALNGQKFTSPDTYIRTMSNRNLEAWQITGSDKHPLHIHVDHMQLGAVGVTNQWPGAPNWNMPGDWVDSISAPGAVPVYMRPERYGGHRVMHCHIAEHSDMGIMAVMYVR-YGSTAKPFPYVK--NWGTCPKAEPVSTPYGGNAAKLPGTIEAEAFDLGGEAVAYHNINIDRGA----PSAMRVGEASVEIDNIGAAKAITYIRDGEWLKYTVNVTKAGTYFVAL------------NVAAAARPKGQAPLGMHWSLWLDAGNFCPAPGAK--GQLLRVEDAAWNGTGGAVAFAAY-APAAALNAFTLPAGIHTLTLCFEGAAANYSFDSFTVTNCGATPGVC 1084
BLAST of jgi.p|Trimin1|354607 vs. uniprot
Match: A0A836CK08_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK08_9STRA) HSP 1 Score: 418 bits (1074), Expect = 1.370e-124 Identity = 255/627 (40.67%), Postives = 329/627 (52.47%), Query Frame = 1
Query: 16 DGTFTVIVAGDENEYIYTVSCDHSGGTNWYHPHFHGSSALQTNGGAAGMLIIEPGVRESADTPMLYQSLPEQYLIIQXXXXXXXXXXXXXXXXXXXXDFSVQDLTAYSLMSGDAVFDTNIQDPFATVNGCTGGSQVINVEAGQWTRLRTLHSGNLYNAIVTIEPAAAGANTPLCDVVLLQKDGAWLGTVPRTVQGTAPGEAPALFFTPSSRNDVAVRCAGAGAKHEIRYAQVNNALRADPEVIA---TLEVSPSTRPPAADLPQWSPCRPAYLQDLTGLTPQQLGNAYPIELRQTINNAQFSGPEDYMHELELAVPEQWLVTGTDLHPLHVHVNHFQIGKVTAANQWAEAPEWLQEGDYMDSLSAKGSVQLLVRPERFSGVMIIHCHITSHADQGMMAVFNIKGKGADALSPPQVAAGDFGTCPFLVPQSAPFRGTPATIPGVIEAEQFDTGGQNIAYWNDNTDDLAGPVPPRSLEAVEVVASTDGATTSVTSIRAGEWLKYTVNVEQTGTYGLTMFSVRREGSTSSTYALVATLSTGPGRKGVSWSLW----SGQRSCPTDPKETTGLVSRVADSNLKLSDDADVYGAYVAPEPAALTAGPQTLLLCFDKDMVNA-RIDSLALRYC 1872
D F VI GD Y YT+ CDH+ GTNWYHPH HGS ALQT GGAAGML+IEP RE+ TP +LPEQ+++IQ D P VNGC + VEAGQWT+L L+ G YNA+ T+ AA G CDVVLL KDGA + PR + LF + SSR +AVRC H + Y ++ A +A T+ V+PS R A DLP WSPCRPAYL DL L P L YP+++R+++N A F GP++Y EL + V + W V+G D+HPLHVHVN Q G TA NQW + P W GD++D+LSA G + ++PERF G M++HCHI H+D G++AV I G G+ AL PP V DFGTCP + S P+ IPG I+AE+FD GG+ IAY N N D L G R++ VEV AS G T V ++A EWL+Y+V+V G Y +T+ S AL P ++G+SWSLW +GQ CP + L++ V + S + Y L G L LCFD+ +D+L L C
Sbjct: 630 DDVFGVIEPGDAAMYTYTIPCDHASGTNWYHPHHHGSVALQTGGGAAGMLVIEPSAREALGTPAEIAALPEQFVVIQEI-----------------------DPAXXXXXXXXXXXXXXDVPPLLMVNGCADAPAQMRVEAGQWTKLHILNVGVAYNAVATLVAAADGVAA--CDVVLLGKDGAPVADAPRALPDRK------LFLSVSSRVTIAVRCPTQWEHHILTYERIGAPPSAAAPRVAHPLTIVVAPSARDAAPDLPLWSPCRPAYLTDLYTLPPTSLAKLYPLDVRESLNGAVFVGPDEYFTELPIGVAQPWSVSGDDIHPLHVHVNKMQWGADTAGNQWDQVPGWNAPGDWVDTLSAPGISVVYIKPERFLGPMVMHCHIAEHSDMGLLAVAKITGIGSGALDPPGVT--DFGTCPADLRDSTPYGLDAVQIPGTIQAEEFDRGGEGIAYHNVNDDRLQGNAL-RAVTGVEVRAS--GTTAWVEGVKATEWLRYSVSVAAAGAYTVTL----------SAGALT------PLKRGLSWSLWLDVPAGQ-GCPPRAQADGRLIAAVGADDFVGSGALTTFAPYTPRAAFVLPLGAHALTLCFDESYDGRLALDALTLARC 1203
BLAST of jgi.p|Trimin1|354607 vs. uniprot
Match: A0A835YVH6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH6_9STRA) HSP 1 Score: 393 bits (1009), Expect = 4.010e-114 Identity = 257/682 (37.68%), Postives = 338/682 (49.56%), Query Frame = 1
Query: 16 DGTFTVIVAGDENEYIYTVSCDHSGGTNWYHPHFHGSSALQTNGGAAGMLIIEPGVRESADTPMLYQSLPEQYLIIQXXXXXXXXXXXXXXXXXXXXDFSVQDLTAYSLMSGDAVFDTNIQDPFATVNGCTGGSQVINVEAGQWTRLRTLHSGNLYNAIVTIEPAAAGANTPLCDVVLLQKDGAWLGTVPRTVQGTAPGEAPALFFTPSSRNDVAVRC---AGAGAKHEIRYAQVNNALR-ADPEVIATLEVSPSTRPPAADLPQWSPCRPAYLQDLTGLTPQQLGNAYPIELRQTINNAQFSGPEDYMHELELAVPEQWLVTGTDLHPLHVHVNHFQIG-KVTAANQWAEAPEWLQEGDYMDSLSAKGSVQLLVRPERFSGVMIIHCHITSHADQGMMAVFNIKGKGADALSPPQVAAGDFGTCPFLVPQSAPFRGTPATIPGVIEAEQFDT------------------------------GGQNIAYWNDNTDDLAGPVPPRSLEAVEVV----------ASTDGATTSVTSIRAGEWLKYTVNVE--QTGTYGLTMFSVRREGSTSSTYALVATLSTGPGRKGVSWSLWSGQRSCPTDPKETTGLVSRVADSNLKLSDDADVYGAYVAPE--PAALTAGPQTLLLCFD--KDMVNA----RIDSLALRYCAASAALCA 1896
D +F I G +Y V CDHS G+NWYHPH HGS A+QT GGAAG+L++ P E++ TP Q+LPEQ++ +Q + LT Y+ + D VF TNI DPF VNGC + I +EAGQWTRL L+ +N++ L KDG + PR V +F + +SR DVAVRC A AG + + YAQ+ NA A P+V+A + V S R A DLP W+PCRPAYL D P P+++R +N F GP DY +L L + W V+G D+HPLH+HVNH QIG +VT NQW E P W + GD++D LS + + VRP FSG M++HCHI H+D G++ V I G+G + P V + GTCP VP S PF+ T A +PG+I+AE FD GG+ IAY N NTD A P R AVE V A A VT+IR GEWL+++VNV G Y LT+ +A + P + ++LW CP ++ G + ++D+N S A + Y AP+ P AL GP L LCFD +V A +DSL L C ASAA CA
Sbjct: 674 DDSFVTIEPGATQQYTIAVPCDHSSGSNWYHPHHHGSVAIQTEGGAAGLLVVGPSPTEASGTPNDIQALPEQFIAVQ--------------------EIVPAKLTQYAGAAHDTVFATNITDPFLLVNGCAAPAP-ITLEAGQWTRLHLLNVALEFNSVFA----------------LTTKDGVPVSDAPRAVDNNL------MFMSIASRLDVAVRCPAAAAAGPAYALTYAQIGNAAAPAAPQVLAAISVVVSARAAAPDLPAWNPCRPAYLMDAYNAAPGNTDRLVPLDVRNNLNGYVFKGPGDYFMQLTLGRVQPWSVSGADVHPLHIHVNHMQIGAEVTDDNQWLEVPNWSRAGDWVDVLSQRNGAIVYVRPVTFSGPMVMHCHIAEHSDLGVIGVAKINGQGQGPVDSPAVT--NHGTCPKDVPLSTPFKNTHANVPGIIQAEHFDNKERVTSHKWSPLLTPPSCPLRNSQAEHFDNGGEGIAYHNFNTDTNAAANPLRPNTAVETVIIPTAAPAAAAPAPPAAAYVTAIRGGEWLRWSVNVPAPNAGGYALTLS--------------IAAATPVP----LEFTLWLDSAGCPPS-EQAEGRLVALSDANYGGSGGAAAFAPY-APQGQPFALPPGPHALTLCFDGADTIVGADTGLALDSLTLTRCGASAAACA 1290
BLAST of jgi.p|Trimin1|354607 vs. uniprot
Match: A0A835YQ52_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ52_9STRA) HSP 1 Score: 356 bits (913), Expect = 2.140e-103 Identity = 243/639 (38.03%), Postives = 320/639 (50.08%), Query Frame = 1
Query: 13 NDGTFTVIVAGDENEYIYTVSCDHSGGTNWYHPHFHGSSALQTNGGAAGMLIIEPGVRESADTPMLYQSLPEQYLIIQXXXXXXXXXXXXXXXXXXXXDFSVQDLTAYSLMSGDAVF---DTNIQDPFATVNGCTGGSQVINVEAGQWTRLRTLHSGNLYNAIVTIEPAAAGANTPLCDVVLLQKDGAWLGTVPRTVQGTAPGEAPALFFTPSSRNDVAVRCAGA---GAKHEIRYAQVNNALRADPEVIATLEVSPSTRPPAADLPQWSPCRPAYLQDLTGLTPQQLGNAYPIELR-QTINNAQFSGPEDYMHELELAVPEQWLVTGTDLHPLHVHVNHFQIGKVTAANQWAEAPEWLQEGDYMDSLSAKGSVQLLVRPERFSGVMIIHCHITSHADQGMMAVFNIKGKGAD----------ALSPPQVAAGDFGTCPFLVPQSAPFR-GTPATIPGVIEAEQFDTGGQNIAYWNDNTDDLAGPVPPRSLEAVEV--VASTDGATTSVTSIRAGEWLKYTVNVEQTGTYGLTMFSVRREGSTSSTYALVATLSTGPGRKGVSWSLWSG-QRSCPTDPKETTGLVSRVADSNLKLSDDADVYGAYVAPEPAALTA-GPQTLLLCFDKDMVNARIDSLAL 1863
+D FTV+ GD EY Y V CDH+GG +W ALQ GGAAG+LIIEPG RE++ P + ++PEQ++II DF ++ L + SGD +F D FA VNGC G +EAGQWT+LR L+ G YN +T+ P AAG CDV+L+ KDG + PR V +F + +SR +VAVRC A A H Y A P IAT+ V S R A DLP +PCR YL + Q + I +R IN+ +F+G + H L P++W V G+ HP+HVHVNH +I VT N PEW GD++D+L+ V + VR ERF+G M+IHCHI H+D G+ V NI A A P + D+GTCP L+P S PF G PA +PGVI+AE+FD GG+ IAY N N D A P +VE+ +A T+V IR GEWLKY+VN+ G Y ++ + A A L T G+ WSLW CP T G + VAD + A V+ AY AP + A GP T+ LCF+ + +DSL +
Sbjct: 395 SDDVFTVVAPGDTVEYTYAVPCDHAGGHHWXXXXXXXXXALQLGGGAAGLLIIEPGPREASTIPAAFSTMPEQHMIIY--------------------DFDLKTLANVADGSGDPIFAAPDGGAAQTFAMVNGC-GKVPTFQIEAGQWTKLRILNVGATYNVALTLAPPAAGILP--CDVMLIAKDGVPVNDAPRAVAKNM------MFMSLASRLEVAVRCPIATLPAAPHLFTYQHFGAAGLEKPPTIATVTVVASYRDAAPDLPPLAPCRATYLTSSAAVPLLQRDAPFQIAMRGDGINSEKFTGEAEDFHTFILDKPQRWTVAGSFQHPVHVHVNHMEIAAVTPDNDIDGIPEWNVVGDWIDTLAVPNGVDVYVRAERFTGKMMIHCHIAQHSDLGVTKVMNIVPNPAAIAPLAAAPIAAGGPADIQVADWGTCPALIPASTPFNVGAPAAVPGVIQAEEFDLGGEGIAYHNINLDRGAPPAMRAGEASVEIDTIAVGKAQVTAVGYIRDGEWLKYSVNIAAAGFYTASL----------TVAAAPAPLLT---PLGMHWSLWLDVDGGCPAPG--TPGKLLTVADDKWNGTGGALVFAAYDAPGFMRILAPGPHTITLCFEGN-AGFELDSLTI 988
BLAST of jgi.p|Trimin1|354607 vs. uniprot
Match: A0A835Z7H4_9STRA (Uncharacterized protein (Fragment) n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7H4_9STRA) HSP 1 Score: 303 bits (777), Expect = 7.020e-87 Identity = 225/645 (34.88%), Postives = 310/645 (48.06%), Query Frame = 1
Query: 13 NDGTFTV-IVAGDENEYIYTVSCDHSGGTNWYHPHFHGSSALQTNGGAAGMLIIEPGVRESADTPMLYQSLPEQYLIIQXXXXXXXXXXXXXXXXXXXXDFSVQDLTAYSLMSGDAVFDTNIQDPFATVNGCTGGSQVINVEAGQWTRLRTLHSGNLYNAIVTIEPAAAGANTPLCDVVLLQKDGAWLGTVPRTVQGTAPGEAPALFFTPSSRNDVAVRC-------AGAG---AKHEIRYAQVNNALRA---DPEVIATLE---VSPSTRPPAADLPQWSPCRPAYLQDLTGLTPQQLGNAYPIELRQTINNAQFSGPEDYMHELELAVPEQWLVTGTDLHPLHVHVNHFQIGKVTAANQWAEAPEWLQEGDYMDSLSAKGSVQLLVRPERFSGVMIIHCHITSHADQ-GMMAVFNIKGKGADALSPPQVAAGDFGTCPFLVPQSAPFR-GTPATIPGV---IEAEQFDTGGQNIAYWNDNT--------DDLAGPVPPRSLEAVEVVASTDGATTSVTSIRAGEWLKYTVNVEQTGTYGLTMFSVR--REGSTSSTYALVATLSTGPGRKGVSWSLW---SGQRSCPTDPKETTGLVSRVADSNLKLSDDADVYGAYVAPEPAA------LTAGPQTLLLCFD 1824
+D TV I G Y Y + CDH+GGTNWYHPH GS+ALQ +GGAAGM+IIE VRE+A+TP+ Y ++PE L++Q + +L + + D + + NG T + VEA W R+R L+ YN ++TI P P C VVLL KDG ++ ++PR+V P E ++F + SSR D+A+RC A AG A+H IRY + ++ A D ++I T+ V S RP A +LP W PCRPAYL L + GN P+ I A G L L QW V+ + LHPLH HVNH Q+G +TAANQW+ P W GD++D+L+A G+V + +RPER++G M++HCH+ HAD GM A I G G P V +FGTC P++ P+ P I + A +FD GG+ IAY N N D + + +VE+ S+ VT +R EW+ YTVN++ G Y + RE T ++WSLW S CP ++ L+ RV D K + PE L G TL LCF+
Sbjct: 98 SDDVLTVNIQPGLSFTYTYRIPCDHAGGTNWYHPHKRGSTALQADGGAAGMVIIEGSVREAANTPVAYGTVPEHMLVVQEIVP-----------------YGANELAENAAAAEDQLLTVTTNTRASYWNGMT-----VKVEANLWQRVRILNVATTYNTVLTITPVNPVGGAP-CSVVLLAKDGVFVASLPRSV----PAE-QSIFLSLSSRVDLAIRCPAIVSTRANAGEIVAEHHIRYRHIKHSGAAELPDTDIITTIANIVVYSSARPVAPNLPVWQPCRPAYLTKLAAPS----GNPRPVA---AIAVAALDGIP-----LTLGSTVQWDVSFSFLHPLHTHVNHMQLGPITAANQWSSLPGWHVAGDWIDTLAAPGTVPVYIRPERYTGKMVVHCHVAYHADSLGMTAAMAISGSGDGPNDIPVVT--NFGTCITAPPKNQPYTVNAPFAITSFGAKMLAYKFDRGGEGIAYKNYNIGRRAILNLDRINTGIVRNDGASVEIDYSSAFGRFFVTRVRNSEWMLYTVNIQTAGVYSAALHVAAPFREDQAPIT---------------MNWSLWLDPSSGSGCPNPG--SSALLVRVRDDGWKGTGPTAPAPIRAHPEAVVSRLKFNLPTGVHTLSLCFE 683
BLAST of jgi.p|Trimin1|354607 vs. uniprot
Match: A0A836C7C1_9STRA (Cupredoxin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7C1_9STRA) HSP 1 Score: 271 bits (692), Expect = 4.910e-74 Identity = 227/680 (33.38%), Postives = 308/680 (45.29%), Query Frame = 1
Query: 13 NDGTFTVIVAGDENEYIYTVSCDHSGGTNWYHPHFHGSSALQTNGGAAGMLIIEPGVRESADTPMLYQSLPEQYLIIQXXXXXXXXXXXXXXXXXXXXDFSVQDLTAYSLMSGD-------AVFDTNIQDPFATVNGCTGGS----------QVINVEAGQWTRLRTLHSGNLYNAIVTIEPAAAGANTPLCDVVLLQKDGAWLGTVPRTVQGTAPGEAPALFFTPSSRNDVAVRC---------AGAGAKHEIRYAQVN---NALRADP--EVIATLEVSPSTRPPAADL--PQWSPCRPAYLQDLTGLTPQQLGNAYPIELRQTINNAQFSGPEDYMHELELAVPEQWLVTGTDLHPLHVHVNHFQIGKVTAANQWAEA--PEWLQEGDYMDSLS----------------------AKGSVQLLVRPERFSGVMIIHCHITSHADQGMMAVFNIKGKGADALSPPQV-AAGDFGTCPFLVPQSAPFRGTPATIPGVIE-AEQFDTGGQNIAYWNDNT--------DDLAGPVPPRSLEAVEVVASTDGATTSVTSIRAGEWLKYTVNVEQTGTYGLTMFSVRREGSTSSTYALVATLSTGPGRKGVSWSLWSGQR---SCPTDPKETTGLVSRVADSNLKLSDDADVYGAYVAPEPAA------LTAGPQTLLLCFD 1824
+D T I G E Y Y + CDH GT WYHPH HGS+ALQ + GAAGMLIIE G RE+ DT Y+ LPE L+IQ + +L +L SGD A+F + P NGC S +I VEAGQW R+R L+ N ++ +EPA AG CDV +L KDG L +PR + TA A+F + +SR D+AVRC A AGA+ I+Y Q++ + +A P V+ T+ V PS RP A DL W+PCRPAYL D+ P+ N +++++ +G D + + L VPE+W VT + HP+H HVNH +G V + Q P+W Q+ D++D+L+ G+ + VRPERF+G M++HCH+ HAD GM AV + G PP D+GTC ++ PF I G + A FD G +AY N + + G R VEV + VT IR GE+L+YT+NV TG Y +TY V G+SW L+ CP P + G + + + S + PA L AG TL LCFD
Sbjct: 164 DDVVDTKIAPGHELTYTYKIPCDHVSGTYWYHPHRHGSTALQADSGAAGMLIIEGGGREAYDTAAPYKDLPENMLVIQ--------------------ELHFGNLAKLALASGDRLFHYDGALFPSAPPPPAVLANGCVACSGPAAASCLSAPLIEVEAGQWARVRVLNVAVALNVVLRLEPADAGGAA--CDVAVLAKDGVPLAQLPRMLD-TARN---AVFLSLASRVDLAVRCPYGAGGDGTAPAGAQL-IKYKQLDALGSTFKASPVESVLGTIAVYPSKRPKAKDLVATPWTPCRPAYLTDI----PETAAN---LKIKEAFFAFGVAGALD-KYAMTLNVPEKWTVTYSTAHPMHTHVNHMLLGAVDSTQQPDPLLLPDWHQKEDWVDTLAXXXXXXXXXXXXXXXXXXXAVGGAGAATVYVRPERFAGNMVVHCHVAEHADNGMSAVATVAGPD----DPPDAFTVVDYGTCTTPPAETTPFFDQVYQIDGSKKRAMFFDNGKDGVAYHNIISGRRKELYVETKLGQNVRRDSSTVEVDIDPQNSEFYVTEIRPGEFLRYTINVPTTGAYQF------------ATYIAVPIPPPNRPAPGISWGLFLDVPPGGGCP--PPGSPGDLFHAYSARWRGSGPPPPAKPVIVKFPANGSWDIDLEAGLHTLTLCFD 790 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354607 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_18799 ID=mRNA_18799|Name=jgi.p|Trimin1|354607|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3003bp|location=Sequence derived from alignment at Contig_288:34420..42697+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCGTGCGCGAATGACGGCACCTTCACGGTCATAGTGGCTGGGGATGAback to top protein sequence of jgi.p|Trimin1|354607 >Trimin1|354607|estExt_Genemark1.C_Ctg_2880004 ID=Trimin1|354607|estExt_Genemark1.C_Ctg_2880004|Name=jgi.p|Trimin1|354607|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=726bp MSCANDGTFTVIVAGDENEYIYTVSCDHSGGTNWYHPHFHGSSALQTNGGback to top mRNA from alignment at Contig_288:34420..42697+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_18799 ID=mRNA_18799|Name=jgi.p|Trimin1|354607|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8278bp|location=Sequence derived from alignment at Contig_288:34420..42697+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_288:34420..42697+ >mRNA_18799 ID=mRNA_18799|Name=jgi.p|Trimin1|354607|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2178bp|location=Sequence derived from alignment at Contig_288:34420..42697+ (Tribonema minus UTEX_B_3156 )back to top |