mRNA_18660 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|182383
Unique NamemRNA_18660
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
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BLAST of jgi.p|Trimin1|182383 vs. uniprot
Match: A0A835YTG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTG1_9STRA)

HSP 1 Score: 513 bits (1322), Expect = 2.100e-184
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 1 
Query:    1 MTDKTSPYQVCSRCIMDTSDPEIAFDEQGVCNHCTEFETVTRANWFPNEEGDRKLQAMLEKIKAEGAGQTYDCILGLSGGVDSSYLALKAKEWGLRPLVVHVDAGWNSELAVANIEAIVKYCGYHLYTHVVNWEEMRDLHLAYLKSGIANQDVPQDHIFFASLYHFATRHRIRYIFSGGNIATEGVFPSAWHGSAMDAINLKSHSQGVWRASSGNLRDHQFLRLLHRVPLSQEDAYRPPAQLHAL 735
            MTDKTSPYQVCSRCIMDTSDPEIAFDEQGVCNHCTEFETVTRANWFPNEEGDRKLQAMLEKIKAEGAGQTYDCILGLSGGVDSSYLALKAKEWGLRPLVVHVDAGWNSELAVANIEAIVKYCGYHLYTHVVNWEEMRDLHLAYLKSGIANQDVPQDHIFFASLYHFATRHRIRYIFSGGNIATEGVFPSAWHGSAMDAINLKSHSQGVWRASSGNLRDHQFLRLLHRVPLSQEDAYRPPAQLHAL
Sbjct:    1 MTDKTSPYQVCSRCIMDTSDPEIAFDEQGVCNHCTEFETVTRANWFPNEEGDRKLQAMLEKIKAEGAGQTYDCILGLSGGVDSSYLALKAKEWGLRPLVVHVDAGWNSELAVANIEAIVKYCGYHLYTHVVNWEEMRDLHLAYLKSGIANQDVPQDHIFFASLYHFATRHRIRYIFSGGNIATEGVFPSAWHGSAMDAINLKSHSQGVWRASSGNLRDHQFLRLLHRVPLSQEDAYRPPAQLHAL 245
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BLAST of jgi.p|Trimin1|182383 vs. uniprot
Match: UPI001D006437 (N-acetyl sugar amidotransferase n=1 Tax=Pusillimonas sp. CC-YST705 TaxID=2755040 RepID=UPI001D006437)

HSP 1 Score: 352 bits (902), Expect = 2.230e-118
Identity = 162/201 (80.60%), Postives = 181/201 (90.05%), Query Frame = 1 
Query:    7 DKTSPYQVCSRCIMDTSDPEIAFDEQGVCNHCTEFETVTRANWFPNEEGDRKLQAMLEKIKAEGAGQTYDCILGLSGGVDSSYLALKAKEWGLRPLVVHVDAGWNSELAVANIEAIVKYCGYHLYTHVVNWEEMRDLHLAYLKSGIANQDVPQDHIFFASLYHFATRHRIRYIFSGGNIATEGVFPSAWHGSAMDAINLKS 609
            +K SP QVCSRC+MDTSDP+I FDE GVCNHC +F+ VTR NWFPN EG  +L  M+E+IKA G GQ YDCILGLSGGVDSSYLALKA+EWGLRPLVVHVDAGWNSELAVANIEAI+KYC Y L+THVV+WEEMRDLHLAYL++GI+NQDVPQDHIFFASLYHFAT + I+YIFSGGNIATEG+FP AWHGSAMDAINLK+
Sbjct:    2 NKNSPEQVCSRCVMDTSDPDITFDEHGVCNHCIKFDAVTRPNWFPNAEGAERLAKMVEQIKAAGKGQEYDCILGLSGGVDSSYLALKAREWGLRPLVVHVDAGWNSELAVANIEAIIKYCNYDLHTHVVDWEEMRDLHLAYLRAGISNQDVPQDHIFFASLYHFATSNGIQYIFSGGNIATEGIFPDAWHGSAMDAINLKA 202
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BLAST of jgi.p|Trimin1|182383 vs. uniprot
Match: UPI00178564C6 (N-acetyl sugar amidotransferase n=1 Tax=Comamonas sp. CMM02 TaxID=2769307 RepID=UPI00178564C6)

HSP 1 Score: 337 bits (863), Expect = 1.610e-112
Identity = 152/196 (77.55%), Postives = 175/196 (89.29%), Query Frame = 1 
Query:   22 YQVCSRCIMDTSDPEIAFDEQGVCNHCTEFETVTRANWFPNEEGDRKLQAMLEKIKAEGAGQTYDCILGLSGGVDSSYLALKAKEWGLRPLVVHVDAGWNSELAVANIEAIVKYCGYHLYTHVVNWEEMRDLHLAYLKSGIANQDVPQDHIFFASLYHFATRHRIRYIFSGGNIATEGVFPSAWHGSAMDAINLKS 609
            YQ CSRC+MDT+DPEI FD QGVCNHC +F+   R  WFPN EG  + +A++E+IKA G GQ YDCI+GLSGGVDSSYLALKA EWGLRPLV+HVDAGWNSELAVANIEAIVK+CGY L+THVV+WE+MRDLHLAYL++ +ANQDVPQDHIFFASLYHFAT++ IRYI SGGN+ATEG+FPSAWHGSAMDAINLK+
Sbjct:    3 YQCCSRCVMDTTDPEITFDAQGVCNHCHQFDARARKEWFPNAEGRNRWEALIEQIKAHGKGQEYDCIIGLSGGVDSSYLALKAHEWGLRPLVMHVDAGWNSELAVANIEAIVKHCGYDLHTHVVDWEDMRDLHLAYLRAAVANQDVPQDHIFFASLYHFATKNNIRYILSGGNLATEGIFPSAWHGSAMDAINLKA 198
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BLAST of jgi.p|Trimin1|182383 vs. uniprot
Match: A0A0A1YN07_9PSED (ExsB family protein n=2 Tax=Pseudomonas taeanensis TaxID=574962 RepID=A0A0A1YN07_9PSED)

HSP 1 Score: 337 bits (863), Expect = 1.890e-112
Identity = 156/203 (76.85%), Postives = 176/203 (86.70%), Query Frame = 1 
Query:    1 MTDKTSPYQVCSRCIMDTSDPEIAFDEQGVCNHCTEFETVTRANWFPNEEGDRKLQAMLEKIKAEGAGQTYDCILGLSGGVDSSYLALKAKEWGLRPLVVHVDAGWNSELAVANIEAIVKYCGYHLYTHVVNWEEMRDLHLAYLKSGIANQDVPQDHIFFASLYHFATRHRIRYIFSGGNIATEGVFPSAWHGSAMDAINLKS 609
            M   T+  Q+CSRC+MDTSDPEI FD  GVCNHC EF+TVT  NWFPNEEG  +  A +E+IKA G  Q YDCILGLSGGVDSSYLA+K  EWGLRPLVVHVDAGWNSELAVANIEA+VK+C Y L+THVV+WE+MRDLHLAYL++GIANQDVPQDHIFFASLYHFAT++ IRYI SGGN+ATEG+FP AWHGSAMDAINLK+
Sbjct:    1 MRTLTTKAQICSRCVMDTSDPEITFDADGVCNHCIEFDTVTLQNWFPNEEGAARWAATVEQIKAAGRDQEYDCILGLSGGVDSSYLAIKIHEWGLRPLVVHVDAGWNSELAVANIEALVKHCNYDLHTHVVDWEDMRDLHLAYLRAGIANQDVPQDHIFFASLYHFATKNGIRYILSGGNLATEGIFPKAWHGSAMDAINLKA 203
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BLAST of jgi.p|Trimin1|182383 vs. uniprot
Match: UPI00164CE46D (N-acetyl sugar amidotransferase n=1 Tax=Sphaerospermopsis sp. LEGE 00249 TaxID=1380707 RepID=UPI00164CE46D)

HSP 1 Score: 336 bits (861), Expect = 3.450e-112
Identity = 151/199 (75.88%), Postives = 176/199 (88.44%), Query Frame = 1 
Query:   22 YQVCSRCIMDTSDPEIAFDEQGVCNHCTEFETVTRANWFPNEEGDRKLQAMLEKIKAEGAGQTYDCILGLSGGVDSSYLALKAKEWGLRPLVVHVDAGWNSELAVANIEAIVKYCGYHLYTHVVNWEEMRDLHLAYLKSGIANQDVPQDHIFFASLYHFATRHRIRYIFSGGNIATEGVFPSAWHGSAMDAINLKSHSQ 618
            Y++C+RC+MDT+DPEI FD+QGVCNHC +FE VT+ NWFPNEEG++KLQ + +KIK  G G++YDCILGLSGGVDSSYLALK  EWGLRPLVVHVDAGWNSELAVANIEAIVKYC Y LYTHV++WEEMRDL LAYLKS I+NQDVPQDH FFA++YHFA ++ IRY+ SGGNIATE +FP AWHGSAMD+INL+S  Q
Sbjct:    5 YEICTRCVMDTTDPEITFDDQGVCNHCHDFEQVTKPNWFPNEEGNQKLQQIFQKIKTFGQGRSYDCILGLSGGVDSSYLALKVHEWGLRPLVVHVDAGWNSELAVANIEAIVKYCNYDLYTHVIDWEEMRDLQLAYLKSAISNQDVPQDHAFFANMYHFAVQNDIRYVLSGGNIATEAIFPKAWHGSAMDSINLRSIHQ 203
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BLAST of jgi.p|Trimin1|182383 vs. uniprot
Match: A0A2N1ZA88_9GAMM (N-acetyl sugar amidotransferase n=1 Tax=Gammaproteobacteria bacterium HGW-Gammaproteobacteria-11 TaxID=2013793 RepID=A0A2N1ZA88_9GAMM)

HSP 1 Score: 335 bits (858), Expect = 1.020e-111
Identity = 153/196 (78.06%), Postives = 174/196 (88.78%), Query Frame = 1 
Query:   22 YQVCSRCIMDTSDPEIAFDEQGVCNHCTEFETVTRANWFPNEEGDRKLQAMLEKIKAEGAGQTYDCILGLSGGVDSSYLALKAKEWGLRPLVVHVDAGWNSELAVANIEAIVKYCGYHLYTHVVNWEEMRDLHLAYLKSGIANQDVPQDHIFFASLYHFATRHRIRYIFSGGNIATEGVFPSAWHGSAMDAINLKS 609
            YQ C++C+MDTSDP+I FD  GVCNHC  F+TVTR NWFPNEEG  +L  +++ +KA G GQ YDCILGLSGGVDSSYLALK  EWGLRPLVVHVDAGWNSELAVANIEA+VK+C + L+THVV+WEEMRDLHLAYL++GIANQDVPQDHIFFASLYHFATR+ IRYI SGGN+ATEG+FP AWHGSAMDAINLK+
Sbjct:    6 YQCCTQCVMDTSDPDITFDGNGVCNHCITFDTVTRLNWFPNEEGALRLATIVKTVKAAGRGQEYDCILGLSGGVDSSYLALKIYEWGLRPLVVHVDAGWNSELAVANIEALVKHCNFDLHTHVVDWEEMRDLHLAYLRAGIANQDVPQDHIFFASLYHFATRNGIRYILSGGNLATEGIFPKAWHGSAMDAINLKA 201
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BLAST of jgi.p|Trimin1|182383 vs. uniprot
Match: A0A2V1JZL5_9BURK (N-acetyl sugar amidotransferase n=2 Tax=Corticimicrobacter populi TaxID=2175229 RepID=A0A2V1JZL5_9BURK)

HSP 1 Score: 332 bits (852), Expect = 7.990e-111
Identity = 151/198 (76.26%), Postives = 172/198 (86.87%), Query Frame = 1 
Query:   16 SPYQVCSRCIMDTSDPEIAFDEQGVCNHCTEFETVTRANWFPNEEGDRKLQAMLEKIKAEGAGQTYDCILGLSGGVDSSYLALKAKEWGLRPLVVHVDAGWNSELAVANIEAIVKYCGYHLYTHVVNWEEMRDLHLAYLKSGIANQDVPQDHIFFASLYHFATRHRIRYIFSGGNIATEGVFPSAWHGSAMDAINLKS 609
            S Y++CSRC+MDTSDPEI FDE GVCNHC  F+T+TR  WFPNEEG  +    +E+IK  G G  YDCILGLSGGVDSSYLA+K  EWGLRPLVVHVDAGWNSELAVANIEA+VK+C Y L+THVV+WEEMRDLHLAYL++GIANQDVPQDHIFFASLYHFAT++ IRYI SGGNI+TE +FP +WHGSAMDAINLK+
Sbjct:    3 SEYKICSRCVMDTSDPEITFDENGVCNHCLGFDTITRPTWFPNEEGKERWAKTVEQIKVAGRGHEYDCILGLSGGVDSSYLAIKVHEWGLRPLVVHVDAGWNSELAVANIEAVVKHCKYDLHTHVVDWEEMRDLHLAYLRAGIANQDVPQDHIFFASLYHFATKNGIRYILSGGNISTESIFPKSWHGSAMDAINLKA 200
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BLAST of jgi.p|Trimin1|182383 vs. uniprot
Match: A0A2N2RTR6_9PROT (N-acetyl sugar amidotransferase n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-22 TaxID=2013714 RepID=A0A2N2RTR6_9PROT)

HSP 1 Score: 330 bits (847), Expect = 5.040e-110
Identity = 152/203 (74.88%), Postives = 172/203 (84.73%), Query Frame = 1 
Query:    1 MTDKTSPYQVCSRCIMDTSDPEIAFDEQGVCNHCTEFETVTRANWFPNEEGDRKLQAMLEKIKAEGAGQTYDCILGLSGGVDSSYLALKAKEWGLRPLVVHVDAGWNSELAVANIEAIVKYCGYHLYTHVVNWEEMRDLHLAYLKSGIANQDVPQDHIFFASLYHFATRHRIRYIFSGGNIATEGVFPSAWHGSAMDAINLKS 609
            M  K +  Q C+RC+MDTSDP I FD  GVCNHC EF+ VT  NWFPNEEG ++   ++E+IKA G GQ YDCILGLSGGVDSSYLA+K  EWGLRPLVVHVDAGWNSELAVANIEAIVKYC Y L+THVV+WE+MRDLHLAYL++GI+NQDVPQDHIFFASLYHFAT++ IRYI SGGN+ATE   P AWHGSAMDAINLK+
Sbjct:    1 MNQKITKTQTCTRCVMDTSDPLITFDAHGVCNHCNEFDAVTSKNWFPNEEGKQRWATIVEQIKATGRGQEYDCILGLSGGVDSSYLAIKVHEWGLRPLVVHVDAGWNSELAVANIEAIVKYCNYDLHTHVVDWEDMRDLHLAYLRAGISNQDVPQDHIFFASLYHFATKNNIRYILSGGNLATEATSPEAWHGSAMDAINLKA 203
[Close]
BLAST of jgi.p|Trimin1|182383 vs. uniprot
Match: A0A429WY40_9BURK (N-acetyl sugar amidotransferase n=1 Tax=Variovorax sp. MHTC-1 TaxID=2495593 RepID=A0A429WY40_9BURK)

HSP 1 Score: 329 bits (843), Expect = 1.790e-109
Identity = 146/196 (74.49%), Postives = 174/196 (88.78%), Query Frame = 1 
Query:   22 YQVCSRCIMDTSDPEIAFDEQGVCNHCTEFETVTRANWFPNEEGDRKLQAMLEKIKAEGAGQTYDCILGLSGGVDSSYLALKAKEWGLRPLVVHVDAGWNSELAVANIEAIVKYCGYHLYTHVVNWEEMRDLHLAYLKSGIANQDVPQDHIFFASLYHFATRHRIRYIFSGGNIATEGVFPSAWHGSAMDAINLKS 609
            YQ C RC+MDTSDPEI FD QGVCNHC EF+ VTR  WFPNE G  +L+ ++++IK +G G  YDCILGLSGGVDSSYLA++ +EWGLRPLVVHVDAGWNSELAVANIE +VK+C + L+THVV+WEEMRDLH+AYL++G+ANQDVPQDH+FF+SLYHFATR++IRYI SGGNIATEG+FP +WHGSAMDAINLK+
Sbjct:    4 YQECVRCVMDTSDPEIEFDPQGVCNHCREFDEVTRLRWFPNEAGMSQLRGIVDRIKRDGNGAAYDCILGLSGGVDSSYLAVRVREWGLRPLVVHVDAGWNSELAVANIEKVVKHCNFDLHTHVVDWEEMRDLHIAYLRAGVANQDVPQDHVFFSSLYHFATRNKIRYILSGGNIATEGIFPKSWHGSAMDAINLKA 199
[Close]
BLAST of jgi.p|Trimin1|182383 vs. uniprot
Match: A0A653X3S2_9PSED (N-acetyl sugar amidotransferase n=1 Tax=Pseudomonas sp. 9AZ TaxID=2653168 RepID=A0A653X3S2_9PSED)

HSP 1 Score: 328 bits (840), Expect = 5.800e-109
Identity = 150/221 (67.87%), Postives = 181/221 (81.90%), Query Frame = 1 
Query:    1 MTDKTSPYQVCSRCIMDTSDPEIAFDEQGVCNHCTEFETVTRANWFPNEEGDRKLQAMLEKIKAEGAGQTYDCILGLSGGVDSSYLALKAKEWGLRPLVVHVDAGWNSELAVANIEAIVKYCGYHLYTHVVNWEEMRDLHLAYLKSGIANQDVPQDHIFFASLYHFATRHRIRYIFSGGNIATEGVFPSAWHGSAMDAINLKSHSQGVWRASSGNLRDHQF 663
            M +  S  QVCSRC+MDTSDPEI FDE G+CNHC +F+  +   WFPNEEG R+ +A++++IK  G GQ YDCILGLSGGVDSSYLA+K +EWGLRPLV+HVDAGWNSELAVANIE+IVK+CGY L+THVV+WEEMRDL LAYL++ IANQDVPQDH+FF+SLYHFAT++ IRYI SGGN+ATEG+ PSAWHGSAMDAINL +      ++   N +   F
Sbjct:    1 MQNSVSTAQVCSRCVMDTSDPEITFDEHGICNHCHQFDERSCREWFPNEEGRRRWEALVQRIKVSGKGQEYDCILGLSGGVDSSYLAIKMQEWGLRPLVMHVDAGWNSELAVANIESIVKHCGYDLHTHVVDWEEMRDLQLAYLRAAIANQDVPQDHVFFSSLYHFATKNNIRYILSGGNLATEGISPSAWHGSAMDAINLNAIHNKYGKSKLKNYKTISF 221
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|182383 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YTG1_9STRA2.100e-184100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI001D0064372.230e-11880.60N-acetyl sugar amidotransferase n=1 Tax=Pusillimon... [more]
UPI00178564C61.610e-11277.55N-acetyl sugar amidotransferase n=1 Tax=Comamonas ... [more]
A0A0A1YN07_9PSED1.890e-11276.85ExsB family protein n=2 Tax=Pseudomonas taeanensis... [more]
UPI00164CE46D3.450e-11275.88N-acetyl sugar amidotransferase n=1 Tax=Sphaerospe... [more]
A0A2N1ZA88_9GAMM1.020e-11178.06N-acetyl sugar amidotransferase n=1 Tax=Gammaprote... [more]
A0A2V1JZL5_9BURK7.990e-11176.26N-acetyl sugar amidotransferase n=2 Tax=Corticimic... [more]
A0A2N2RTR6_9PROT5.040e-11074.88N-acetyl sugar amidotransferase n=1 Tax=Betaproteo... [more]
A0A429WY40_9BURK1.790e-10974.49N-acetyl sugar amidotransferase n=1 Tax=Variovorax... [more]
A0A653X3S2_9PSED5.800e-10967.87N-acetyl sugar amidotransferase n=1 Tax=Pseudomona... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_459contigContig_459:6910..7647 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|182383|e_gw1.459.9.1
DescriptionATPase of the PP-loop superfamily implicated in cell cycle control
COG categoryD
Max annot lvl1236|Gammaproteobacteria
EggNOG OGsCOG0037@1|root,COG0037@2|Bacteria,1NKHX@1224|Proteobacteria,1RZTX@1236|Gammaproteobacteria
Evalue3.1e-113
Seed ortholog1395571.TMS3_0112755
Hectar predicted targeting categoryother localisation
TranscriptId182705
TrackFilteredModels1
ProteinId182383
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|182383gene_18660Tribonema minus UTEX_B_3156 geneContig_459 6910..7647 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18660_1exon_18660_1Tribonema minus UTEX_B_3156 exonContig_459 6910..7647 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18660CDS_18660Tribonema minus UTEX_B_3156 CDSContig_459 6910..7647 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|182383Trimin1|182383|e_gw1.459.9.1Tribonema minus UTEX_B_3156 polypeptideContig_459 6910..7647 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18660 ID=mRNA_18660|Name=jgi.p|Trimin1|182383|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=738bp|location=Sequence derived from alignment at Contig_459:6910..7647- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGACAGACAAGACCAGCCCATATCAAGTGTGCTCGCGGTGCATCATGGA
CACGAGTGACCCCGAGATCGCTTTTGACGAGCAGGGTGTGTGCAACCATT
GCACCGAATTCGAGACGGTCACCCGTGCCAACTGGTTTCCCAATGAAGAG
GGCGACCGCAAGCTGCAGGCGATGCTCGAGAAAATCAAGGCTGAAGGTGC
CGGTCAGACGTACGACTGTATTCTGGGGCTGAGTGGTGGTGTCGACAGTT
CATACCTTGCGCTGAAGGCCAAGGAATGGGGTCTGCGTCCCTTGGTGGTC
CATGTGGATGCCGGGTGGAACAGTGAACTCGCGGTGGCCAATATCGAGGC
GATTGTCAAATACTGCGGCTACCACCTCTACACACATGTGGTCAACTGGG
AGGAAATGCGTGACCTGCATCTGGCTTATCTGAAATCGGGTATTGCGAAT
CAGGATGTGCCGCAGGACCACATCTTCTTTGCGAGCCTCTACCATTTCGC
GACCAGGCATCGGATTCGATACATTTTCTCCGGGGGCAATATCGCAACCG
AGGGGGTATTCCCCTCGGCATGGCACGGCAGTGCCATGGACGCCATCAAT
CTGAAAAGCCATTCACAAGGCGTTTGGCGAGCATCCTCTGGAAACTTACG
AGACCATCAGTTTCTTCGACTACTACATCGGGTACCCCTTTCTCAAGAAG
ATGCGTACCGTCCGCCCGCTCAATTACATGCCCTATGA
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protein sequence of jgi.p|Trimin1|182383

>Trimin1|182383|e_gw1.459.9.1 ID=Trimin1|182383|e_gw1.459.9.1|Name=jgi.p|Trimin1|182383|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=246bp
MTDKTSPYQVCSRCIMDTSDPEIAFDEQGVCNHCTEFETVTRANWFPNEE
GDRKLQAMLEKIKAEGAGQTYDCILGLSGGVDSSYLALKAKEWGLRPLVV
HVDAGWNSELAVANIEAIVKYCGYHLYTHVVNWEEMRDLHLAYLKSGIAN
QDVPQDHIFFASLYHFATRHRIRYIFSGGNIATEGVFPSAWHGSAMDAIN
LKSHSQGVWRASSGNLRDHQFLRLLHRVPLSQEDAYRPPAQLHAL*
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mRNA from alignment at Contig_459:6910..7647-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18660 ID=mRNA_18660|Name=jgi.p|Trimin1|182383|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=738bp|location=Sequence derived from alignment at Contig_459:6910..7647- (Tribonema minus UTEX_B_3156 )
ATGACAGACAAGACCAGCCCATATCAAGTGTGCTCGCGGTGCATCATGGA
CACGAGTGACCCCGAGATCGCTTTTGACGAGCAGGGTGTGTGCAACCATT
GCACCGAATTCGAGACGGTCACCCGTGCCAACTGGTTTCCCAATGAAGAG
GGCGACCGCAAGCTGCAGGCGATGCTCGAGAAAATCAAGGCTGAAGGTGC
CGGTCAGACGTACGACTGTATTCTGGGGCTGAGTGGTGGTGTCGACAGTT
CATACCTTGCGCTGAAGGCCAAGGAATGGGGTCTGCGTCCCTTGGTGGTC
CATGTGGATGCCGGGTGGAACAGTGAACTCGCGGTGGCCAATATCGAGGC
GATTGTCAAATACTGCGGCTACCACCTCTACACACATGTGGTCAACTGGG
AGGAAATGCGTGACCTGCATCTGGCTTATCTGAAATCGGGTATTGCGAAT
CAGGATGTGCCGCAGGACCACATCTTCTTTGCGAGCCTCTACCATTTCGC
GACCAGGCATCGGATTCGATACATTTTCTCCGGGGGCAATATCGCAACCG
AGGGGGTATTCCCCTCGGCATGGCACGGCAGTGCCATGGACGCCATCAAT
CTGAAAAGCCATTCACAAGGCGTTTGGCGAGCATCCTCTGGAAACTTACG
AGACCATCAGTTTCTTCGACTACTACATCGGGTACCCCTTTCTCAAGAAG
ATGCGTACCGTCCGCCCGCTCAATTACATGCCCTATGA
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Coding sequence (CDS) from alignment at Contig_459:6910..7647-

>mRNA_18660 ID=mRNA_18660|Name=jgi.p|Trimin1|182383|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=738bp|location=Sequence derived from alignment at Contig_459:6910..7647- (Tribonema minus UTEX_B_3156 )
ATGACAGACAAGACCAGCCCATATCAAGTGTGCTCGCGGTGCATCATGGA
CACGAGTGACCCCGAGATCGCTTTTGACGAGCAGGGTGTGTGCAACCATT
GCACCGAATTCGAGACGGTCACCCGTGCCAACTGGTTTCCCAATGAAGAG
GGCGACCGCAAGCTGCAGGCGATGCTCGAGAAAATCAAGGCTGAAGGTGC
CGGTCAGACGTACGACTGTATTCTGGGGCTGAGTGGTGGTGTCGACAGTT
CATACCTTGCGCTGAAGGCCAAGGAATGGGGTCTGCGTCCCTTGGTGGTC
CATGTGGATGCCGGGTGGAACAGTGAACTCGCGGTGGCCAATATCGAGGC
GATTGTCAAATACTGCGGCTACCACCTCTACACACATGTGGTCAACTGGG
AGGAAATGCGTGACCTGCATCTGGCTTATCTGAAATCGGGTATTGCGAAT
CAGGATGTGCCGCAGGACCACATCTTCTTTGCGAGCCTCTACCATTTCGC
GACCAGGCATCGGATTCGATACATTTTCTCCGGGGGCAATATCGCAACCG
AGGGGGTATTCCCCTCGGCATGGCACGGCAGTGCCATGGACGCCATCAAT
CTGAAAAGCCATTCACAAGGCGTTTGGCGAGCATCCTCTGGAAACTTACG
AGACCATCAGTTTCTTCGACTACTACATCGGGTACCCCTTTCTCAAGAAG
ATGCGTACCGTCCGCCCGCTCAATTACATGCCCTATGA
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