mRNA_18615 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|144227
Unique NamemRNA_18615
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|144227 vs. uniprot
Match: A0A835Z8L5_9STRA (Beta-lactamase/transpeptidase-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8L5_9STRA)

HSP 1 Score: 634 bits (1635), Expect = 4.040e-230
Identity = 305/305 (100.00%), Postives = 305/305 (100.00%), Query Frame = 1
Query:    1 VPFTADNLFPIGSNTKLHIAVAIYQMQEMGLLHVEDAVNDYMPPDMAEFGTPGPWRPQVPGVWDPTCQRPTLVNLMEMSSGLKEPFICDDSGKIIVSILLDAYSGHISDYLGLWINAPMNFVPGTEYHYETGNWILLAYIIERISGQSLSAYLQENIYQYATPDVDNDIIYDPYGGAHALLPRRMDSYRKFIDSDSGAEIATGSCTPYIQPGVVSGAGGSFATIAAEMDLYRILFHSTPLGGPIISEDSVREIMKPRKEMAPGTAAPWFAQGLTVLPSPEGGDVPKAVLYCGGIECTNTCILSLT 915
            VPFTADNLFPIGSNTKLHIAVAIYQMQEMGLLHVEDAVNDYMPPDMAEFGTPGPWRPQVPGVWDPTCQRPTLVNLMEMSSGLKEPFICDDSGKIIVSILLDAYSGHISDYLGLWINAPMNFVPGTEYHYETGNWILLAYIIERISGQSLSAYLQENIYQYATPDVDNDIIYDPYGGAHALLPRRMDSYRKFIDSDSGAEIATGSCTPYIQPGVVSGAGGSFATIAAEMDLYRILFHSTPLGGPIISEDSVREIMKPRKEMAPGTAAPWFAQGLTVLPSPEGGDVPKAVLYCGGIECTNTCILSLT
Sbjct:    1 VPFTADNLFPIGSNTKLHIAVAIYQMQEMGLLHVEDAVNDYMPPDMAEFGTPGPWRPQVPGVWDPTCQRPTLVNLMEMSSGLKEPFICDDSGKIIVSILLDAYSGHISDYLGLWINAPMNFVPGTEYHYETGNWILLAYIIERISGQSLSAYLQENIYQYATPDVDNDIIYDPYGGAHALLPRRMDSYRKFIDSDSGAEIATGSCTPYIQPGVVSGAGGSFATIAAEMDLYRILFHSTPLGGPIISEDSVREIMKPRKEMAPGTAAPWFAQGLTVLPSPEGGDVPKAVLYCGGIECTNTCILSLT 305          
BLAST of jgi.p|Trimin1|144227 vs. uniprot
Match: A0A8K1FLR9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLR9_PYTOL)

HSP 1 Score: 199 bits (506), Expect = 1.050e-56
Identity = 124/315 (39.37%), Postives = 179/315 (56.83%), Query Frame = 1
Query:    1 VPFTADNLFPIGSNTKLHIAVAIYQMQEMGLLHVEDAVNDYMPPD-MAEFGTPGP--WRPQVPGVWDPT-CQRPTLVNLMEMSSGLKEPFICD--DSGKIIVSIL-LDAYSGHISDYLGLWINAPMNFVPGTEYHYETGNWILLAYIIERISGQSLSAYLQENIYQYATPDVDNDIIYDPYGGAHALLPRRMDSYRKFIDSDSGAE----IATGSCTPYIQPGVVSGAGGSFATIAAEMDLYRILFHSTPLGGPIISEDSVREIMKPRKEMAPGTAAPWFAQGLTVLPSPEGGDVPKAVLYCGGIECTNTCILSL 912
            V    D LFPIGSN+KL  +VA+YQ++E G +++ D VN+++  D   +FG P    W P++    D + C+  T V L+ MSSG+ +   CD  D      S   L  Y G I  Y+G +IN P+ F PGT Y Y   N++LL+Y++E+ISGQS   YL+E+I+     D+  D IYDPY GA ++  R +D YR F     G E    + TG+C+P I  G VSG+GG   T+      Y  LFH+      ++S +S+R+I+     ++P      +AQG+ V    E  D P+AV+YCGG++CT TCI  L
Sbjct:   99 VAMQPDCLFPIGSNSKLFTSVALYQLEEAGRVNLSDPVNNWLKQDDFVQFGYPNQTKWCPRLANSTDDSPCEEITFVQLLHMSSGIGDSVNCDNVDPEHCYRSAEDLAYYKGSIGVYVGRFINDPLVFKPGTNYSYANPNFVLLSYLVEKISGQSFGGYLKEHIFDKL--DL-KDTIYDPYAGALSVNHRVVDEYRNFFIQGDGDEKPRLVLTGTCSPLISSGAVSGSGGLKGTVNDLERWYTDLFHNRGRQSKLLSAESIRKIVTRTNPVSP-----TYAQGVAVRGVTED-DWPEAVMYCGGVKCTATCIAML 404          
BLAST of jgi.p|Trimin1|144227 vs. uniprot
Match: A0A5D6XGM4_9STRA (Beta-lactamase domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XGM4_9STRA)

HSP 1 Score: 192 bits (488), Expect = 7.350e-54
Identity = 115/316 (36.39%), Postives = 171/316 (54.11%), Query Frame = 1
Query:    1 VPFTADNLFPIGSNTKLHIAVAIYQMQEMGLLHVEDAVNDYMPP-DMAEFGTPGP--WRPQVPGVW-DPTCQRPTLVNLMEMSSGLKEPFICDDSGKIIV---SILLDAYSGHISDYLGLWINAPMNFVPGTEYHYETGNWILLAYIIERISGQSLSAYLQENIYQYATPDVDNDIIYDPYGG---AHALLPRRMDSYRKFIDSDSGAE-----IATGSCTPYIQPGVVSGAGGSFATIAAEMDLYRILFHSTPLGGPIISEDSVREIMKPRKEMAPGTAAPWFAQGLTVLPSPEGGDVPKAVLYCGGIECTNTCI 903
            VP   D +FPIGSN+KL ++VA+YQ+QE G +++  AVNDY+   D A FG P    W P++     D  C+  T V+L+ M SG+ +   CD+         +  L  Y G I  Y+G +IN P+ F PG+ Y Y   N++LL+Y++E++S Q+L  YL+E+I+         D  YDPY G    H     +  +YR     D+G       +ATG+C+PY+  G +SGAGG  +T A     Y  LFH +  G  ++S DS+R I++ R        +  +AQG+ V  +    D P  + YCGG +C  TC+
Sbjct:  131 VPLAVDTVFPIGSNSKLFVSVALYQLQERGRVNLSHAVNDYLEQSDFASFGFPNQTHWCPRLASAPPDSPCEAVTFVDLLNMGSGIGDELNCDNVAPQYCRRSASDLAVYHGLIGAYVGSFINDPLVFAPGSNYSYSNMNFVLLSYMVEKLSDQALEVYLREHIFDKLGLA---DTYYDPYAGLLGVHRGYAHQYVNYRVGTVDDTGKGTSTEFLATGTCSPYMNSGAISGAGGLHSTTADMNKWYSDLFHDSGRGSKVLSVDSIRAIVRRRN-----VVSRTYAQGVAVFFAEGSEDWPSQLAYCGGTKCAFTCM 438          
BLAST of jgi.p|Trimin1|144227 vs. uniprot
Match: A0A2D4BWC1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BWC1_PYTIN)

HSP 1 Score: 187 bits (476), Expect = 6.380e-50
Identity = 112/311 (36.01%), Postives = 170/311 (54.66%), Query Frame = 1
Query:    1 VPFTADNLFPIGSNTKLHIAVAIYQMQEMGLLHVEDAVNDYMPP-DMAEFGTPGP--WRPQVPGV-WDPTCQRPTLVNLMEMSSGLKEPFICDD-SGKIIVSILLDA--YSGHISDYLGLWINAPMNFVPGTEYHYETGNWILLAYIIERISGQSLSAYLQENIYQYATPDVDNDIIYDPYGGAHALLPRRMDSYRKFIDSDSGAE----IATGSCTPYIQPGVVSGAGGSFATIAAEMDLYRILFHSTPLGGPIISEDSVREIMKPRKEMAPGTAAPWFAQGLTVLPSPEGGDVPKAVLYCGGIECTNTC 900
            V    D++FPIGSN  L  +V++YQ+QE GL+++ D VND++   D A FG P    W P++     D  C+  T V L+ M SG+ +   CD+   +   +   D   Y G  + Y+G++IN P+ F P T Y Y   N++LL Y+IE+ISGQS S YLQE+I+         +  +DPY G   + PR ++ Y  F +  S  +    +ATG+CTPY+  G VSG GG  +T      LYR LF        +++  S+  I+  R  ++P      +AQG++V+   +G   P+ + YCGG++C  TC
Sbjct:  794 VAMRXDDIFPIGSNXXLFTSVSLYQLQERGLVNLTDPVNDHLTQADFAAFGFPNQTKWCPRLKHAPADSPCETITFVQLLYMGSGIGDSANCDNVDPEYCYNSANDLAYYKGSTAKYVGMFINDPLVFKPDTNYSYANPNFVLLTYMIEKISGQSFSTYLQEHIFDKIGM---TNSYFDPYSGGRGIRPRYVEQYAHFYEQPSAEKKPVRLATGTCTPYMNSGAVSGTGGIRSTAQDMQMLYRDLFSDHGRSSKVLTSASIEMILNRRNPVSPD-----YAQGISVVDVVDGW--PQMIQYCGGMKCCTTC 1094          
BLAST of jgi.p|Trimin1|144227 vs. uniprot
Match: A0A2D4CDS3_PYTIN (Beta-lactamase domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CDS3_PYTIN)

HSP 1 Score: 180 bits (457), Expect = 1.360e-49
Identity = 109/311 (35.05%), Postives = 167/311 (53.70%), Query Frame = 1
Query:    1 VPFTADNLFPIGSNTKLHIAVAIYQMQEMGLLHVEDAVNDYMPP-DMAEFGTPGP--WRPQVPGV-WDPTCQRPTLVNLMEMSSGLKEPFICDD-SGKIIVSILLDA--YSGHISDYLGLWINAPMNFVPGTEYHYETGNWILLAYIIERISGQSLSAYLQENIYQYATPDVDNDIIYDPYGGAHALLPRRMDSYRKFIDSDSGAE----IATGSCTPYIQPGVVSGAGGSFATIAAEMDLYRILFHSTPLGGPIISEDSVREIMKPRKEMAPGTAAPWFAQGLTVLPSPEGGDVPKAVLYCGGIECTNTC 900
            V    D++FPIGSN KL  +V++YQ+QE GL+++ D VND++   D A FG P    W P++     D  C+  T V+L+ M SG+ +   CD+   +   +   D   Y G  + Y+G++IN P+ F P T Y Y   N++LL Y+IE+ISGQS S YLQE+I+         +  +DPY G   + PR ++ Y  F +  S  +    +ATG+CTPY+  G VSG GG  +T       YR LF        +++  S+  I+     ++       +AQG+  +   +    P+A+ YCGG++C  TC
Sbjct:  104 VAMRTDDIFPIGSNAKLFTSVSLYQLQERGLVNLTDPVNDHLTQADFAAFGFPNQTKWCPRLKHAPADSPCETITFVHLLYMGSGIGDSLNCDNVDPEYCYNSANDLAYYKGSTAKYVGMFINDPLVFKPDTNYSYANPNFVLLTYMIEKISGQSFSTYLQEHIFDKIGM---TNSYFDPYSGGRGIRPRYVEQYAHFYEQPSAEKKPVRLATGTCTPYMNSGAVSGTGGIRSTAQDMQMWYRDLFSDRGRSSKVLTSASIEMILNRHNPVSQN-----YAQGIGAIGVVDRW--PQAIQYCGGMKCCVTC 404          
BLAST of jgi.p|Trimin1|144227 vs. uniprot
Match: A0A0G4HT76_9ALVE (Beta-lactamase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HT76_9ALVE)

HSP 1 Score: 179 bits (455), Expect = 2.670e-49
Identity = 118/348 (33.91%), Postives = 171/348 (49.14%), Query Frame = 1
Query:    1 VPFTADNLFPIGSNTKLHIAVAIYQMQEMGLLHVEDAVNDYMPP-DMAEFGTPGP--WRPQVPGVWDPTCQRPTLVNLMEMSSGLKEPFICDDSG------KIIVSILLDAYSGHISDYLGLWINAPMNFVPGTEYHYETGNWILLAYIIERISGQSLSAYLQENIYQYATPDVDNDIIYDPYGGAHALLPRRMDSYRKFIDSD--------SGAE------------------------IATGSCTPYIQPGVVSGAGGSFATIAAEMDLYRILFHSTPLGGPIISEDSVREIMKPRKEMAPGTAAPWFAQGLTVL------PSPEGGDVPKAVLYCGGIECTNTCI 903
            VP T D +FPIGSNTKL  A+A+YQ+QE G  ++   VND +   D+  FG      W P++    +  C+  T   L+ MSSG+ + F CD  G        +       Y G ++ Y+ L+I++P+ F PGT Y Y   N++L  Y+IE+ SGQS S YL+++I   A+P   N   +DP+ G  A +P  +D Y KF            SG E                        ++ GSC PY  PG +   GG  +++     +Y+ LF S      ++SE SVR +++P           +FAQG+ V        S EGG  P+AV YCGG  C++TCI
Sbjct:   70 VPMTEDRVFPIGSNTKLFTAIALYQLQEAGKFNISTPVNDLLDEEDLKAFGVENSTRWCPRLEETPEGLCENVTTEQLLSMSSGIVDAFNCDVIGFDSPYCHPLGGPEFVIYKGSMAAYISLFIHSPLMFKPGTGYSYSNPNFVLAGYLIEKFSGQSYSEYLRDHI---ASPLGLNSTAFDPWAGEFAFVPGYVDQYVKFFSQSTAQDFPSLSGKEGEERASHGGTLLASGSGRTPETKLLSVGSCRPYWSPGGMGATGGMTSSVDDLASVYQDLFSSRGESSRLLSESSVRLLLRPLTRPTGAPEGIFFAQGVIVRYSNGTSASTEGG-WPEAVEYCGGTMCSHTCI 413          
BLAST of jgi.p|Trimin1|144227 vs. uniprot
Match: K3XC16_GLOUD (Beta-lactamase domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XC16_GLOUD)

HSP 1 Score: 163 bits (412), Expect = 6.280e-43
Identity = 104/321 (32.40%), Postives = 164/321 (51.09%), Query Frame = 1
Query:    1 VPFTADNLFPIGSNTKLHIAVAIYQMQEMGLLHVEDAVNDYMP-PDMAEFGTPGP--WRPQV----PGVWDPTCQRPTLVNLMEMSSGLKEPFICDDSGKIIVSILLDAYSGHISDYLGLWINAPMNFVPGTEYHYETGNWILLAYIIERISGQSLSAYLQENIYQYATPDVDNDIIYDPYGGAHALLPRRMDSYRKFIDSDSGAE-----------IATGSCTPYIQPGVVSGAGGSFATIAAEMDLYRILFHSTPLGGPIISEDSVREIMKPRKEMAPGTAAPWFAQGLTVL--PSPEGGDVPKAVLYCGGIECTNTCI 903
            VP    ++FPIGSN+K+  AVA+YQ+QE GL+++   VN+Y+   D   FG      W P+V    P      C+  T VNL+ M SG+         G+++  +    Y G I+ ++G +IN P+ F PGT Y Y   N++LL+Y+IE++SGQ L AYL + I+Q   P       YDPY G   +    ++ Y  F                   ++TG+C+P +  G +SGAGG  +T+     +Y+ LFH+      ++SE S+R + + R  + P      +AQG+ V    +    + P  +  CG ++C  TC+
Sbjct:  107 VPMAKHSIFPIGSNSKIFTAVAMYQLQERGLVNLSAPVNEYLNHADFVAFGFANQTQWCPRVLQPAPSS-SANCENVTFVNLLNMGSGI--------DGRVVNDLAY--YKGSIAKHVGAFINEPLVFRPGTNYSYTHANYVLLSYMIEKLSGQQLDAYLSKQIFQ---PIGLKRTYYDPYSGGRYVHKGFVNQYADFYTQPRATVATETVQQKKEYLSTGTCSPDVNSGALSGAGGIHSTMKDMHRVYKDLFHNRGRKSKVLSEASIRAMAQTRNPVRPS-----YAQGIEVAFDEADVAREWPSTISSCGQMKCVVTCL 408          
BLAST of jgi.p|Trimin1|144227 vs. uniprot
Match: A0A2D4CK40_PYTIN (Beta-lactamase domain-containing protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CK40_PYTIN)

HSP 1 Score: 158 bits (399), Expect = 3.000e-42
Identity = 98/288 (34.03%), Postives = 150/288 (52.08%), Query Frame = 1
Query:   70 YQMQEMGLLHVEDAVNDYMPP-DMAEFGTPGP--WRPQVPGV-WDPTCQRPTLVNLMEMSSGLKEPFICDDSGKIIV---SILLDAYSGHISDYLGLWINAPMNFVPGTEYHYETGNWILLAYIIERISGQSLSAYLQENIYQYATPDVDNDIIYDPYGGAHALLPRRMDSYRKFIDSDSGAE----IATGSCTPYIQPGVVSGAGGSFATIAAEMDLYRILFHSTPLGGPIISEDSVREIMKPRKEMAPGTAAPWFAQGLTVLPSPEGGDVPKAVLYCGGIECTNTC 900
            YQ+QE GL+++ D VND++   D A FG P    W P++     D  C+  T V L+ M SG+ +   CD+         +  L  Y G  + Y+G++IN P+ F P T Y Y   N++LL Y+IE+ISGQS S YLQE+I+         +  +DPY G   + PR ++ Y  F +  S  +    +ATG+CTPY+  G VSG+GG  +T       YR LF        +++  S+  I+     +        +AQG+  +   +G   P+ + YCGG++C+ TC
Sbjct:    1 YQLQERGLVNLTDPVNDHLTQADFAAFGFPNQTKWCPRLKHAPADSPCETITFVQLLYMGSGIGDSANCDNVDPEYCYHSANDLAYYKGSTAKYVGMFINDPLVFKPDTNYSYANPNFVLLTYMIEKISGQSFSTYLQEHIFDKIGM---TNSYFDPYSGGRGIRPRYVEQYAHFYEQPSAEKKPVRLATGTCTPYMNSGAVSGSGGIRSTAQDMQMFYRDLFSDRGRSSKVLASASIEMILNRHNPVMQD-----YAQGIGAVDVVDGW--PQMIQYCGGMKCSVTC 278          
BLAST of jgi.p|Trimin1|144227 vs. uniprot
Match: A0A8K1CR39_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CR39_PYTOL)

HSP 1 Score: 153 bits (386), Expect = 7.260e-41
Identity = 95/235 (40.43%), Postives = 137/235 (58.30%), Query Frame = 1
Query:    1 VPFTADNLFPIGSNTKLHIAVAIYQMQEMGLLHVEDAVNDYMPPD-MAEFGTPGP--WRPQVPGVWDPT-CQRPTLVNLMEMSSGLKEPFICD--DSGKIIVSIL-LDAYSGHISDYLGLWINAPMNFVPGTEYHYETGNWILLAYIIERISGQSLSAYLQENIYQYATPDVDNDIIYDPYGGAHALLPRRMDSYRK-FIDSDSGAE---IATGSCTPYIQPGVVSGAGGSFATI 672
            V    D LFPIGSN+KL  +VA+YQ++E G +++ D VN+++  D   +FG P    W P++    D + C+  T V L+ MSSG+ +   CD  DS     S   L  Y G I  Y+G +IN P+ F PGT Y Y   N++LL+Y++E+ISGQS   YL+E+I+     D+  D IYDPY GA ++  R  D Y   FI  + G +   + TG+C+P I+ G +SG GG   T+
Sbjct:   65 VAMQPDCLFPIGSNSKLFTSVALYQLEEAGRVNLSDPVNNWLKQDDFVQFGYPNQTKWCPRLANSTDDSPCEEITFVQLLHMSSGIGDSVNCDNVDSEHCYRSAEDLAYYKGSIGVYVGRFINDPLVFKPGTNYSYANPNFVLLSYLVEKISGQSFGGYLKEHIFDKL--DL-KDTIYDPYAGALSVNHRVTDEYLSYFIQGEGGQKPRLVLTGTCSPLIKSGALSGTGGLKGTV 296          
BLAST of jgi.p|Trimin1|144227 vs. uniprot
Match: A0A0S4IQH0_BODSA (Beta lactamase-like protein, putative n=1 Tax=Bodo saltans TaxID=75058 RepID=A0A0S4IQH0_BODSA)

HSP 1 Score: 149 bits (377), Expect = 1.100e-38
Identity = 97/303 (32.01%), Postives = 159/303 (52.48%), Query Frame = 1
Query:    1 VPFTADNLFPIGSNTKLHIAVAIYQMQEMGLLHVEDAVNDYMPP-DMAEFGTPGPWR--PQVPGVWDPTCQRPTLVNLMEMSSGLKEPFICDDSGKIIVSILLDAYSGHISDYLGLWINAPMNFVPGTEYHYETGNWILLAYIIERISGQSLSAYLQENIYQYATPDVDNDIIYDPYGGAHALLPRRMDSYRKFIDSDSGAEIATGSCTPYIQPGVVSGAGGSFATIAAEMDLYRILFHSTPLGGPIISE-DSVREIMKPRKEMAPGTAAPWFAQGLTVLPSPEGGDVPKAVLYCGGIECTNT 897
            +P  +   +PI SNTKLH+ +A+YQ+QE GL+++  +V DY+   D   FG P   R  P V G  +  CQ  T + L+ MSS + +            ++    + G I  Y+G  I  P++  PGT ++Y    ++L +Y +++ SG SL  YL+ NIY        ++  +D Y G  ++ P R   Y  +ID D+   ++ G C+     G  SGAGG  +  A E  LY  LF+ +  G P+ +   S+  I+KPR+ +  GT+  ++ QGL ++ +     +P+ +LY G I C++T
Sbjct:   39 LPVVSKTRYPIASNTKLHVTIALYQLQERGLVNLSHSVADYLTQEDFVAFGLPNVTRYCPVVSGSTE--CQVITFIQLLSMSSCMTD-----------TNLQFMPFPGSIGLYVGWVIQLPLSCTPGTIFYYSNPAFMLGSYFVQKFSGLSLEKYLKANIYDVLGM---SNTYFDQYNGKFSMDPLRTREYYHYIDPDTKKTVSIGMCSSEYDLGSASGAGGIVSDQADEAILYFSLFNFSNRGKPLFTNPQSLLAIIKPRQVIV-GTS--YYGQGLFLIANSPTEAIPEIILYEGEIVCSHT 322          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|144227 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8L5_9STRA4.040e-230100.00Beta-lactamase/transpeptidase-like protein (Fragme... [more]
A0A8K1FLR9_PYTOL1.050e-5639.37Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XGM4_9STRA7.350e-5436.39Beta-lactamase domain-containing protein n=1 Tax=P... [more]
A0A2D4BWC1_PYTIN6.380e-5036.01Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A2D4CDS3_PYTIN1.360e-4935.05Beta-lactamase domain-containing protein n=1 Tax=P... [more]
A0A0G4HT76_9ALVE2.670e-4933.91Beta-lactamase domain-containing protein n=1 Tax=C... [more]
K3XC16_GLOUD6.280e-4332.40Beta-lactamase domain-containing protein n=1 Tax=G... [more]
A0A2D4CK40_PYTIN3.000e-4234.03Beta-lactamase domain-containing protein (Fragment... [more]
A0A8K1CR39_PYTOL7.260e-4140.43Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A0S4IQH0_BODSA1.100e-3832.01Beta lactamase-like protein, putative n=1 Tax=Bodo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_251contigContig_251:52155..55609 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|144227|gw1.251.14.1
Descriptionprotein).. Source PGD
COG categoryS
Max annot lvl121069|Pythiales
EggNOG OGs2CWPC@1|root,2RUXR@2759|Eukaryota,1MED4@121069|Pythiales
Evalue3.17e-53
Seed ortholog36331.EPrPI00000026025
Hectar predicted targeting categoryother localisation
TranscriptId144549
TrackFilteredModels1
ProteinId144227
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|144227gene_18615Tribonema minus UTEX_B_3156 geneContig_251 52155..55609 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18615_1exon_18615_1Tribonema minus UTEX_B_3156 exonContig_251 52155..52341 +
exon_18615_2exon_18615_2Tribonema minus UTEX_B_3156 exonContig_251 52462..52580 +
exon_18615_3exon_18615_3Tribonema minus UTEX_B_3156 exonContig_251 54085..54148 +
exon_18615_4exon_18615_4Tribonema minus UTEX_B_3156 exonContig_251 55065..55609 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18615CDS_18615Tribonema minus UTEX_B_3156 CDSContig_251 52155..52341 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|144227Trimin1|144227|gw1.251.14.1Tribonema minus UTEX_B_3156 polypeptideContig_251 52155..55609 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18615 ID=mRNA_18615|Name=jgi.p|Trimin1|144227|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=915bp|location=Sequence derived from alignment at Contig_251:52155..55609+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GTTCCCTTCACTGCCGACAATCTCTTCCCCATCGGCTCCAATACGAAGTT
GCACATTGCTGTTGCCATCTACCAAATGCAAGAGATGGGCTTGCTGCATG
TGGAGGACGCAGTCAACGACTACATGCCACCGGATATGGCCGAGTTTGGC
ACGCCAGGACCTTGGCGCCCTCAAGTGCCAGGTGTGTGGGACCCGACCTG
CCAGCGACCGACCCTGGTAAATCTGATGGAAATGAGCTCGGGACTGAAGG
AGCCTTTCATCTGTGATGACAGTGGCAAAATCATTGTAAGTATCCTGCTC
GACGCTTACTCAGGTCACATCTCGGACTACCTGGGGCTCTGGATTAATGC
ACCCATGAACTTTGTGCCAGGCACTGAGTACCACTACGAGACTGGCAACT
GGATCCTACTCGCGTACATCATTGAAAGAATCAGCGGCCAGTCCCTTTCC
GCCTACCTGCAGGAGAACATCTACCAGTACGCGACGCCCGACGTGGACAA
CGACATCATCTACGATCCTTATGGTGGCGCACACGCGCTCCTCCCGAGGC
GCATGGACTCGTACCGTAAGTTCATTGACAGCGACAGCGGCGCCGAGATT
GCCACAGGTTCTTGCACCCCCTACATCCAACCCGGGGTAGTCAGCGGCGC
CGGCGGCAGCTTCGCGACCATCGCTGCCGAAATGGATCTCTATCGCATTC
TCTTCCACAGCACGCCCCTCGGAGGACCAATAATCAGTGAAGATTCTGTC
AGGGAGATTATGAAGCCGCGAAAGGAGATGGCGCCTGGCACGGCCGCTCC
GTGGTTTGCGCAGGGCTTGACGGTGTTGCCCAGCCCAGAGGGTGGTGATG
TGCCAAAGGCGGTGCTGTACTGCGGTGGCATAGAGTGTACCAACACTTGC
ATTCTGAGTCTGACG
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protein sequence of jgi.p|Trimin1|144227

>Trimin1|144227|gw1.251.14.1 ID=Trimin1|144227|gw1.251.14.1|Name=jgi.p|Trimin1|144227|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=305bp
VPFTADNLFPIGSNTKLHIAVAIYQMQEMGLLHVEDAVNDYMPPDMAEFG
TPGPWRPQVPGVWDPTCQRPTLVNLMEMSSGLKEPFICDDSGKIIVSILL
DAYSGHISDYLGLWINAPMNFVPGTEYHYETGNWILLAYIIERISGQSLS
AYLQENIYQYATPDVDNDIIYDPYGGAHALLPRRMDSYRKFIDSDSGAEI
ATGSCTPYIQPGVVSGAGGSFATIAAEMDLYRILFHSTPLGGPIISEDSV
REIMKPRKEMAPGTAAPWFAQGLTVLPSPEGGDVPKAVLYCGGIECTNTC
ILSLT
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mRNA from alignment at Contig_251:52155..55609+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18615 ID=mRNA_18615|Name=jgi.p|Trimin1|144227|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3455bp|location=Sequence derived from alignment at Contig_251:52155..55609+ (Tribonema minus UTEX_B_3156 )
GTTCCCTTCACTGCCGACAATCTCTTCCCCATCGGCTCCAATACGAAGTT GCACATTGCTGTTGCCATCTACCAAATGCAAGAGATGGGCTTGCTGCATG TGGAGGACGCAGTCAACGACTACATGCCACCGGATATGGCCGAGTTTGGC ACGCCAGGACCTTGGCGCCCTCAAGTGCCAGGTGTGTGTGGGGATTGTCT TTTCAAGCATTACATGTGTTGTATCTTTCTCCATGTGCGCAGTGTTATGG ATTGTCACAGCCAGGCAGCTCCCCAATAATATCACTGTTTGCATTTGCTT TGCGCAGGGGACCCGACCTGCCAGCGACCGACCCTGGTAAATCTGATGGA AATGAGCTCGGGACTGAAGGAGCCTTTCATCTGTGATGACAGTGGCAAAA TCATTGTAAGTATCCTGCTCGACGCTGTGGACCTCATGCTGACACAGTTG TCATTTACTGTGTCGCGGTCACTGATGCAAGCTTGAGTCCTTCAGCTCTT CAAATTGCATCTATTAGTATGGCAACTGATTAAGCGTATGTCATGTAGGA GCACTCGGCGCCTCGATACACTGGCAGTATACTATAGCACCCCTTATGAC GTGGGGAGGCATTGTGGATCAGTATAGCAACGAAAGGTCTGAGTAAATGG CTGCCACATGATGCATGACACAGGCGCATAGCTGATGGGTTGCTATTTCT CTCATGCAGTATACTTCACAGTACTTGGTAGCTTGAATTTAGTTGCAACA TGGCTGCTTCACTTTGCTTCACCATCCAGATTGGCCTTGCCAGGTCGTGT GGTGCATGCGCTTCTTAGCTCTAGCGTTTTTCACGCTGATTACTTCATGC TGGGATGTGCATGTCAAACAAGCACCATGTCGTCGTGTTGCAGTCAACTT CAACATGCTCCTTTGAGCGCTTTGCAGCTCAATGCTCGAGCAGCTCATCT CAGGCGCATTTATATAATACATGACACGCTGATAGTTGAAGCAGCCGTCA CAGCCGTCGTAAGTCTAGCAACACGAAGGGCTAGCAAGTGTTTCTGACTG CATGTCAATGCAGCAGCCGTGGCAAATGCAAACACCTGTCAAGCCTTTTC TCATGGTGCAGCATACAGGTGAATCTGCATCCCTACAGCGTCAGCGCTCC GCAAAATTCATGGAAACATGCATTCATACCGCTTTTAGGTCAGCATCGAA CTCAATCACTCAGATCCATCGAAAAACTACTGGTACACAGATACTTTAAG CTTCGCTCCTTTAGACACCCGACAAACAGTGGCATGGGCCATTCACCACG AAGGAACTGCATGCCTCAAGCAGCTGCGCCTTACCAGTCACCAAAAAACC CCTGCTCTCCCATTTCGCCATGCAATGCTCGATGAACGTTTTCAAAGTTG GTTGTTAGATGTACCACTGCTGAAACTTCAAGGAATTCAATGTACTCAGT TGGCATGAATTTGTTCAATGCGTACATTCAATGCATGTAGGATCGCAAGT AAATTGTATTTCTGGAATATTGTCAAAAATCAAGTTCAACATTCAATGCA TGTAGGACCGCAAGTAAATTGTATTTGTGGAATGTTGTCATAAATCAAGT CCATCATGTATTGCACACAATCATTGCAGGCCCATGGCATCCTTGACAAT GGCGGCCCCTGAGCATTTTACCAAGGCATAGCAAAAAGGTGGCTCAGATG TATATTCCTTCCTAATCATCATGATGAACTTGAATTGATGAACTGTCTGT ACGAACCTTCGTTTCACACGGTATGGGATTGCATCACCATGCCTGCTGCT GAACCATGGGCCATGACTGATACAGAAAGCCGTGTCACACGTCTTGCGAC GCTTTCTGTGCTTCTGCTTGCATCTTTGCCAGTATACGTCCACCTGCTTC TGGAATGCCAGCGGCATCAACGTATACGAGTACTCAGGTCACATCTCGGA CTACCTGGGGCTCTGGATTAATGCACCCATGAACTTTGTGCCAGGTACGG CGTAGTACATGTAGTTTAATTGTTAATTGCATGCTCCAGCTTGAGGAGCA CAATTCCTGTGAACTTTATGCTCTCACGCTTGTACTGTGCGTACGTGGAC ACTGCGGTAGAAATGCATCAGCTAGCTGATTTTATGCTTCACCTTACACA TCATTTACAAACCTCTACCCTGTACCTCTTCACGCCATTACTGTTTAACA TGAACATGCCACTGTGCAGTGAGCCCGTCTATGATTGCCGATTTCCTTGC TGTGGAGAGGGTTGCCAATCCCTGCAGCACAAAGCTCACGAAGTTGCACA CATAGTCATCCATTTGTCATGTGTAAATTATTGCTGCTCTCCTGTATCAG CCACTGAAGGGCTTGAAGGTACACTTGCAGCTTCATCTCTTGAGTTCCAG CGCAGTCGTGAGCTGTCACTAGTTATTATCAGGTCCGCTTGCTTCTTGTC AAGTGACACGGCTTAATCTTCAACACAGACAATAAAAGTCTATTCACACA AATTCATCATAGACAACGACCTTATCAGCACCGGGCCACGGCCATGTGCA TCCCAGAGAGATTGGCATGCATGCCTCCATTCTGCAAGTTCAACAACAAC AGCCCGCAGGCACCGCACTCACCAAAACGACTGTTTCTGCTGAGAGGCTC ATGCCCTTGTCTAATCACAGAGAAGGGCACTGCTCTTTTGCTTGCATGCT TCAGCAAGCCATGGGCTGCTATCCAGGCGCTTGCCATCAAGTCAGAACTG CCAAGGCCCAGCTGCACGTATACATCATGATACATAGGTTACATAACTTA GTTGGCTTGTACAACTCAGCGGGTGCGTGTTCAAGTCGGCAAGGTCACAG TGCGACACCCTCCTTGTATGGTGTTGTGCTAATCCACGCCACCACTCACC TGCTTTTCAGGCACTGAGTACCACTACGAGACTGGCAACTGGATCCTACT CGCGTACATCATTGAAAGAATCAGCGGCCAGTCCCTTTCCGCCTACCTGC AGGAGAACATCTACCAGTACGCGACGCCCGACGTGGACAACGACATCATC TACGATCCTTATGGTGGCGCACACGCGCTCCTCCCGAGGCGCATGGACTC GTACCGTAAGTTCATTGACAGCGACAGCGGCGCCGAGATTGCCACAGGTT CTTGCACCCCCTACATCCAACCCGGGGTAGTCAGCGGCGCCGGCGGCAGC TTCGCGACCATCGCTGCCGAAATGGATCTCTATCGCATTCTCTTCCACAG CACGCCCCTCGGAGGACCAATAATCAGTGAAGATTCTGTCAGGGAGATTA TGAAGCCGCGAAAGGAGATGGCGCCTGGCACGGCCGCTCCGTGGTTTGCG CAGGGCTTGACGGTGTTGCCCAGCCCAGAGGGTGGTGATGTGCCAAAGGC GGTGCTGTACTGCGGTGGCATAGAGTGTACCAACACTTGCATTCTGAGTC TGACG
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Coding sequence (CDS) from alignment at Contig_251:52155..55609+

>mRNA_18615 ID=mRNA_18615|Name=jgi.p|Trimin1|144227|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=915bp|location=Sequence derived from alignment at Contig_251:52155..55609+ (Tribonema minus UTEX_B_3156 )
GTTCCCTTCACTGCCGACAATCTCTTCCCCATCGGCTCCAATACGAAGTT
GCACATTGCTGTTGCCATCTACCAAATGCAAGAGATGGGCTTGCTGCATG
TGGAGGACGCAGTCAACGACTACATGCCACCGGATATGGCCGAGTTTGGC
ACGCCAGGACCTTGGCGCCCTCAAGTGCCAGGTGTGTGGGACCCGACCTG
CCAGCGACCGACCCTGGTAAATCTGATGGAAATGAGCTCGGGACTGAAGG
AGCCTTTCATCTGTGATGACAGTGGCAAAATCATTGTAAGTATCCTGCTC
GACGCTTACTCAGGTCACATCTCGGACTACCTGGGGCTCTGGATTAATGC
ACCCATGAACTTTGTGCCAGGCACTGAGTACCACTACGAGACTGGCAACT
GGATCCTACTCGCGTACATCATTGAAAGAATCAGCGGCCAGTCCCTTTCC
GCCTACCTGCAGGAGAACATCTACCAGTACGCGACGCCCGACGTGGACAA
CGACATCATCTACGATCCTTATGGTGGCGCACACGCGCTCCTCCCGAGGC
GCATGGACTCGTACCGTAAGTTCATTGACAGCGACAGCGGCGCCGAGATT
GCCACAGGTTCTTGCACCCCCTACATCCAACCCGGGGTAGTCAGCGGCGC
CGGCGGCAGCTTCGCGACCATCGCTGCCGAAATGGATCTCTATCGCATTC
TCTTCCACAGCACGCCCCTCGGAGGACCAATAATCAGTGAAGATTCTGTC
AGGGAGATTATGAAGCCGCGAAAGGAGATGGCGCCTGGCACGGCCGCTCC
GTGGTTTGCGCAGGGCTTGACGGTGTTGCCCAGCCCAGAGGGTGGTGATG
TGCCAAAGGCGGTGCTGTACTGCGGTGGCATAGAGTGTACCAACACTTGC
ATTCTGAGTCTGACG
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