mRNA_18457 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|154281
Unique NamemRNA_18457
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Match: A0A836CHI3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHI3_9STRA)

HSP 1 Score: 1174 bits (3038), Expect = 0.000e+0
Identity = 616/616 (100.00%), Postives = 616/616 (100.00%), Query Frame = 1
Query:    1 QVFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLIDADVPFSGGSSGXXXXXXVTRPQPGPAHNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLALALLREAPAWGAGLARV 1848
            QVFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLIDADVPFSGGSSGXXXXXXVTRPQPGPAHNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLALALLREAPAWGAGLARV
Sbjct:    1 QVFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLIDADVPFSGGSSGXXXXXXVTRPQPGPAHNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLALALLREAPAWGAGLARV 616          
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Match: W4GIX2_9STRA (Cyclin-F n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GIX2_9STRA)

HSP 1 Score: 518 bits (1334), Expect = 2.180e-170
Identity = 299/616 (48.54%), Postives = 373/616 (60.55%), Query Frame = 1
Query:    4 VFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLID-------------ADVPFS----GGSSGXXXXXXVTRPQPGPAHNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLAL 1800
            VFSF V       ++V+  + V +RWR  L S   LWR +P      G+NW  F  LG K  GTEG C+RC  R+TGR LA+K+ARV+P+GEGVPYYMLRELAVL+ ++HP+++ L  +SL   +L VFF +V +TLH+ INP +              D   G       +P+  ++  L QLL A+A CHRRGVLHRNLKPKH+L+  +            D L  A L +SDFALVR    PRR YT EVVTLWYRPPE+LMG   Y+PAVD+WS GCIFAEMA G+PLFTGISEIDQLFQIFS+L TP A  WP FT LPNY F FP+W  R  +      FPTL    +DLL ++ TYDP  RI+AE ALRHPY                AD+ F+      + G      V        H        A+ R V    R        +LRP HRSMLVDWL+EVVDVFEMC R+AFLAV + DRYL    V + ++QLLGATCLH+ASKCEDV+YIG+EDL++CAD VY   DVL MEE +LN L+F L++PT LDF N+  ++ P L  +       LAQYL+E+ LQ+       PS     C+ LA+
Sbjct:  293 VFSFLVYS-----DDVYQMQLVSKRWRQ-LTSTPSLWRALPDVTADGGINWLNFRNLGIKNKGTEGTCYRCFQRSTGRVLAMKRARVFPKGEGVPYYMLRELAVLQGIKHPHIASLEMISLAKDELHVFFPYVDKTLHEVINPTS--------------DPSGGRV-----LPEPQVRRFLHQLLDAIAHCHRRGVLHRNLKPKHLLIDTKSS----------DELDDAELRISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRSYSPAVDIWSIGCIFAEMAQGKPLFTGISEIDQLFQIFSKLATPTAATWPSFTTLPNYRFEFPNWTSRPWS----RLFPTLSDLGLDLLSKLLTYDPDERISAENALRHPYFAGFQTFPTLVPSIPMADMRFAMRRAALADGGASNVQVIPEHIDLFHAYLRESEVAQWRDVNYLSRK----RTQSLRPIHRSMLVDWLIEVVDVFEMCLRTAFLAVHYTDRYLDTEMVKKTKFQLLGATCLHVASKCEDVSYIGVEDLSMCADNVYTSVDVLKMEEHLLNTLNFTLSVPTVLDFVNIYQKMMPPLTQK----TAMLAQYLSELALQEYRFLKYLPSCVATCCLSLAM 861          
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Match: A0A418ASX6_9STRA (Cyclin-F n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418ASX6_9STRA)

HSP 1 Score: 513 bits (1320), Expect = 5.150e-169
Identity = 297/615 (48.29%), Postives = 370/615 (60.16%), Query Frame = 1
Query:    4 VFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLIDADVPFSGGSSGXXXXXXVTRPQPGPA----------------HNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLAL 1800
            VFSF V       ++V+  + V +RWR+ L S   LWR +P       +NW  F  LG K  GTEG C+RC  R+TGR LA+K+ARV+P+GEGVPYYMLRELAVL+ ++HPN++ L  +SL + +L VFF FV +TLH+ INP +              D   G       +P+  ++  L QLL A+A CHRRGVLHRNLKPKH+L+               D L  A L +SDFALVR    PRR YT EVVTLWYRPPE+LMG   Y+PAVD+WS GCIFAEMA G+PLFTGISEIDQLFQIFS+L TP    WP+FT LPNY F FP+W  R  A      FP +    +DLL ++ TY+P  RI+AE ALRHPY       FSG  +       +     G                  H+       A  + ++   R         LRP HRSMLVDWL+EVVDVFEMC R+AFLAV + DR+L    V +  +QLLGATCLH+ASKCEDV+YIG+EDL++CAD VY   DVL MEE++LN L+F LA+PT LDF N+  ++ P L  R       LAQYLAE+ LQ+       PS     C+ LAL
Sbjct:  106 VFSFLVYS-----DDVYQMQLVSKRWRE-LTSTPSLWRMLPDVTADGSINWLNFRNLGIKNKGTEGTCYRCFQRSTGRMLAMKRARVFPKGEGVPYYMLRELAVLQGIKHPNIASLEMISLANDELHVFFPFVDKTLHEIINPTS--------------DPNGGRI-----LPEHQVRRFLHQLLDAIAHCHRRGVLHRNLKPKHLLIDTDSP----------DELDNAELRISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRSYSPAVDIWSIGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTRDTWPEFTTLPNYGFDFPNWKRRPWA----RLFPNISDLGLDLLSKLLTYNPDERISAESALRHPY-------FSGSHAFPTLLPSIPMINMGFTLQRVYESNIPEHINLFHSYLRDSELALWKDIKYLSRQ------KTLRPIHRSMLVDWLIEVVDVFEMCLRTAFLAVHYTDRFLDTVMVKKAMFQLLGATCLHVASKCEDVSYIGVEDLSMCADNVYTSVDVLKMEEQLLNTLNFTLAVPTVLDFLNIYQKMMPPLQKR----TAMLAQYLAELALQEYRFLRYLPSCVATCCLSLAL 664          
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Match: A0A067D956_SAPPC (Cyclin-F n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D956_SAPPC)

HSP 1 Score: 508 bits (1307), Expect = 2.350e-167
Identity = 295/609 (48.44%), Postives = 372/609 (61.08%), Query Frame = 1
Query:    4 VFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLIDADVPFSGGSSGXXXXXX----------VTRPQPGPAHNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLAL 1800
            VFSF V   G D+  +H  + V +RWR+ L S T L+R VP   P   +NW  F  LG K  GTEG C+RC  R++G+ LA+K+ARV+P+GEGVPYYMLRELAVL+ +RHP+++ L  +SL   +L VFF +V +TLH+ INP +              D   G       +P+  ++ LL QLL A+A CHRRGVLHRNLKPKH+L+               D    A L +SDFALVR    PRR YT EVVTLWYRPPE+LMG ++Y+PAVD+WS GCIFAEMA G+PLFTGISEIDQLFQIFS+L TP +  WP FT+LPNY F FP+W  R         FP + P  +DLL ++ TY+P  RI+AE ALRHPY       F   S+G                + R   G         A  R   ++        +    LRP HRSMLVDWL+EVVDVFEMC R+AFLAV + DR+L    V + ++QLLGATCLH+ASKCEDV+YIG+EDL++CAD VY    VL MEE++LN L+F LA+PT LDF N+     P L  +       LAQYL+E+ LQ+       PS     C+ LAL
Sbjct:  221 VFSFLV---GTDD--LHNMQLVSKRWRE-LTSHTSLYRHVPDTTPDGTINWLNFRNLGIKNKGTEGTCYRCYQRSSGKVLAMKRARVFPKGEGVPYYMLRELAVLQGIRHPHIASLEMISLAKDELHVFFPYVDKTLHEIINPTS--------------DPNGGRV-----LPEHQIRRLLHQLLDAIAYCHRRGVLHRNLKPKHLLIDTDVA----------DNYDNATLRISDFALVRATGIPRRQYTMEVVTLWYRPPEILMGEKQYSPAVDVWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSATWPAFTSLPNYRFEFPNWKPRPLD----RLFPHISPLGLDLLGKLLTYNPDARISAENALRHPY-------FDAASAGVPRLLPSIPMTDMAFTLHRQYEGNPEYMDLFHAHLRDAELKLCKEVKYLSRQKTLRPLHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRFLDVVMVKKTKFQLLGATCLHVASKCEDVSYIGVEDLSMCADNVYTSMQVLQMEEQLLNTLNFTLAVPTALDFLNIYQRSMPTLEKKTS----MLAQYLSELALQEYSFLKFLPSVVATCCLSLAL 779          
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Match: A0A6G0N017_9STRA (Cyclin-F n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0N017_9STRA)

HSP 1 Score: 509 bits (1310), Expect = 2.840e-167
Identity = 286/603 (47.43%), Postives = 374/603 (62.02%), Query Frame = 1
Query:    4 VFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLID---ADVPFSGGSSGXXXXXXVTRPQPGPA-HNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLAL 1800
            VFSF V  + +         +V ++W+D L S   L+R +P   P   +NW  F+ LG K  GTEG C +C  R+TG+ LA+KKARV+P+GEGVPYYMLRELAVL+ ++H +++ L  +SL   +L VFF +V +TLH+ INP                   SG       +P+  ++ LL QLL A+A CHRRGVLHRNLKPKH+L++  +           D L+ A L +SDFALVR    PRR YT EVVTLWYRPPE+LMG   Y+ AVD+WS GCIFAEMA G+PLFTGISEIDQLFQIFS+L TP +  WP F++LPNY F FPHW  R         FP +    +DLL ++  Y+P +RITAE+ALRHPY  D   A +P +           ++R + GP   +     A  R   ++        +    LRP HRSMLVDWL+EVVDVFEMC R+AFLAV + DRYL    V + ++QLLGATCLH+ASKCEDV+YIG+EDLA+CAD VY   +VL+MEE++LN L+F L++PT LDF N+   + P +  +       LA YL E+ LQ+       PS   A C+ +A+
Sbjct:  263 VFSFLVTANDLKS-----MSEVSKKWKD-LTSRRSLYRSLPSVTPEGSVNWINFKNLGVKNKGTEGTCIKCCQRSTGKILAMKKARVFPKGEGVPYYMLRELAVLKGIKHDHIASLELISLAKDELHVFFPYVDKTLHEIINP-------------------SGDPNGGRVLPEAVIRKLLHQLLDAIAYCHRRGVLHRNLKPKHLLIKTSDP----------DNLSDATLQISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRGYSSAVDIWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSETWPGFSSLPNYHFEFPHWKRRPLN----RLFPGISDLGIDLLTKLLVYNPDQRITAEDALRHPYFSDEAPAFLPLTPKIPMDQMCYTMSRARIGPTPEHVELFHAYLRQTEMESWKEIKYLSRQKTLRPAHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRYLDIVMVKKTQFQLLGATCLHVASKCEDVSYIGVEDLAMCADNVYTSVEVLEMEEKLLNTLNFTLSVPTALDFLNIYERMIPPIQKKTS----KLAHYLLELALQEYQFLKYLPSVVAACCLSMAM 822          
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Match: G4YQ15_PHYSP (Cyclin-F n=20 Tax=Phytophthora TaxID=4783 RepID=G4YQ15_PHYSP)

HSP 1 Score: 506 bits (1302), Expect = 4.350e-166
Identity = 285/603 (47.26%), Postives = 373/603 (61.86%), Query Frame = 1
Query:    4 VFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLID---ADVPFSGGSSGXXXXXXVTRPQPGPA-HNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLAL 1800
            VFSF V       +++    +V ++W+D L S   L+R +P   P   +NW  F+ LG K  GTEG C +C  R+TG+ LA+KKARV+P+GEGVPYYMLRELAVL+ ++H +++ L  +SL   +L VFF +V +TLH+ INP                   SG       +P+  ++ LL QLL A+A CHRRGVLHRNLKPKH+L++  +           D L+ A L +SDFALVR    PRR YT EVVTLWYRPPE+LMG   Y+ AVD+WS GCIFAEMA G+PLFTGISEIDQLFQIFS+L TP +  WP F++LPNY F FPHW  R         FP +    +DLL ++  Y+P +RITAE+ALRHPY  D   A +P +           ++R + GP   +     A  R   +         +    LRP HRSMLVDWL+EVVDVFEMC R+AFLAV + DRYL    V + ++QLLGATCLH+ASKCEDV+YIG+EDLA+CAD VY   +VL+MEE++LN L+F L++PT LDF N+   + P +  +       LA YL E+ LQ+       PS     C+ +A+
Sbjct:  262 VFSFLVTA-----DDLMSMSEVSKKWKD-LTSRRSLYRSLPSVTPEGSVNWINFKNLGIKNKGTEGTCIKCSQRSTGKILAMKKARVFPKGEGVPYYMLRELAVLKGIKHDHIASLELISLAKDELHVFFPYVDKTLHEIINP-------------------SGDPNGGRVLPEAVIRKLLHQLLDAIAYCHRRGVLHRNLKPKHLLIKTSDP----------DNLSDATLQISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRGYSSAVDIWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSETWPGFSSLPNYHFEFPHWKRRPLN----RLFPGISDLGIDLLTKLLVYNPDQRITAEDALRHPYFSDEAPAFLPLTPKIPMDQMCYTMSRARIGPTPEHVELFHAYLRQTELDSWKEIKYLSRQKTLRPAHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRYLDIVMVKKTQFQLLGATCLHVASKCEDVSYIGVEDLAMCADNVYTSVEVLEMEEKLLNTLNFTLSVPTALDFLNIYERMIPPIQKKTS----MLAHYLLELALQEYQFLKYLPSVVADCCLSMAM 821          
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Match: A0A0N7L3C9_PLAHL (Cyclin-F n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L3C9_PLAHL)

HSP 1 Score: 505 bits (1301), Expect = 2.500e-165
Identity = 284/603 (47.10%), Postives = 372/603 (61.69%), Query Frame = 1
Query:    4 VFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLIDAD---VPFSGGSSGXXXXXXVTRPQPGPAHNAAAAGAPARARGVQRGGRAVR-AAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLAL 1800
            VFSF V    +         QV ++W++ L S   L+R +P   P   +NW  F+ LG K  GTEG C +C  R+TG+ LA+KKARV+P+GEGVPYYMLRELAVL+ ++H +++ L  +SL   +L VFF +V +TLH+ INP                   +G       +P+  ++ LL QLL A+A CHRRGVLHRNLKPKH+L++  +           + L+ A L +SDFALVR    PRR YT EVVTLWYRPPE+LMG   Y+ AVD+WS GCIFAEMA G+PLFTGISEIDQLFQIFS+L TP +  WP F++LPNY F FPHW  R         FP +    +DLL ++ TY+P +RITAE+ALRHPY  D     +  +           +TR   GP     A       +  Q   + ++  +    LRP HRSMLVDWL+EVVDVFEMC R+AFLAV + DRYL    V + ++QLLGATCLH+ASKCEDV+YIG+EDLA+CAD VY   +VL+MEE++LN L+F L++PT LDF N+   + P +  +       LA YL E+ LQ+       PS   A C+ +A+
Sbjct:  315 VFSFLVTAKNLQN-----MAQVSKKWKE-LTSRRSLYRTLPSVTPEGSVNWINFKNLGIKNKGTEGTCIKCCQRSTGKILAMKKARVFPKGEGVPYYMLRELAVLKGIKHDHIASLELISLARDELHVFFPYVDKTLHEIINP-------------------TGDPNGGRMLPEAVIRKLLHQLLDAIAYCHRRGVLHRNLKPKHLLIKTTDP----------EKLSDATLQISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRGYSSAVDIWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSETWPGFSSLPNYHFEFPHWKRRPLN----RLFPGISDHGIDLLTKLLTYNPDQRITAEDALRHPYFSDRTSELLTLTPKIPMDQMCYTITRAWIGPTPGHVALFHAYLRQTEQESWKEIKYLSRQKTLRPAHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRYLDIVMVKKTQFQLLGATCLHVASKCEDVSYIGVEDLAMCADNVYTSVEVLEMEEKLLNTLNFTLSVPTALDFLNIYERMIPPIQKKTS----MLAHYLLELALQEYQFLKYLPSKVAACCLSMAM 874          
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Match: A0A3F2RSE3_9STRA (Cyclin-F n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RSE3_9STRA)

HSP 1 Score: 497 bits (1280), Expect = 3.490e-164
Identity = 283/603 (46.93%), Postives = 370/603 (61.36%), Query Frame = 1
Query:    4 VFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYL---IDADVPFSGGSSGXXXXXXVTRPQPGPA-HNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLAL 1800
            VFSF V    +         +V  +WR+ L S   L+R V    P   +NW  F+ LG K  GTEG C +C  R++G+ LA+KKARV+P+GEGVPYYMLRELAVL+ ++H +++ L  +SL   +L VFF +V +TLH+ INP                D   G       +P+  ++ LL QLL A+A CHRRGVLHRNLKPKH+L++  +           + L  A L +SDFALVR    PRR YT EVVTLWYRPPE+LMG   Y+ AVD+WS GCIFAEMA G+PLFTGISEIDQLFQIFS+L TP +  WP F++LPNY F FPHW  R         FP +    +DLL ++  Y+P +RITAE+ALRHPY    + A +P +           ++R + GP   +     A  R   ++        +    LRP HRSMLVDWL+EVVDVFEMC R+AFLAV + DRYL    V + ++QLLGATCLH+ASKCEDV+YIG+EDLA+CAD VY   +VL+MEE++LN L+F L++PT LDF N+   + P +  +       LA YL E+ LQ+       PS   A C+ +A+
Sbjct:  151 VFSFLVTPRDLGN-----MSRVSTKWRE-LTSRRSLYRSVISVTPEGSVNWINFKNLGIKNKGTEGTCIKCSQRSSGKILAMKKARVFPKGEGVPYYMLRELAVLKGIKHDHIASLELISLAKDELHVFFPYVDKTLHEVINPTG--------------DPTGGRV-----LPEHVIRKLLHQLLDAIAYCHRRGVLHRNLKPKHLLIKTSDL----------ENLDDATLQISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRGYSSAVDIWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSETWPGFSSLPNYHFEFPHWKRRPLN----RLFPGISDLGIDLLTKLLVYNPDQRITAEDALRHPYFSNEVPAFLPLTPKIPMDQMCYTMSRARIGPTPEHVELFHAYLRQTELESWKEIKYLSRQKTLRPAHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRYLDIVMVKKTQFQLLGATCLHVASKCEDVSYIGVEDLAMCADNVYTSVEVLEMEEKLLNTLNFTLSVPTALDFLNIYERMIPPIQKKTS----MLAHYLLELALQEYQFLKYLPSVVAACCLSMAM 710          
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Match: A0A3M6VPZ6_9STRA (Cyclin-F n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPZ6_9STRA)

HSP 1 Score: 501 bits (1289), Expect = 5.180e-164
Identity = 284/603 (47.10%), Postives = 375/603 (62.19%), Query Frame = 1
Query:    4 VFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLIDADVPFSGGSSGXXXXXX---VTRPQPGPA-HNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLAL 1800
            VFSF V       +++    QV ++W++ L S   L+R +P   P   +NW  F+ LG K  GTEG C +C  R+TG+ LA+KKARV+P+GEGVPYYMLRELAVL+ ++H +++ L  +SL   +L VFF +V +TLH+ INP                D   G       +P+  ++ LL QLL A+A CHRRGVLHRNLKPKH+L++  + A           L+ A L +SDFALVR    PRR YT EVVTLWYRPPE+LMG   Y+ AVD+WS GCIFAEMA G+PLFTGISEIDQLFQIFS+L TP +  WP F++LPNY F FPHW  R         FP +    +DLL ++  Y+P +RI+AE+ALRHPY  +  + F   +           ++R + GP   + A   A  R   ++        +    LRP HRSMLVDWL+EVVDVFEMC R+AFLAV + DRYL    V + ++QLLGATCLH+ASKCEDV+YIG+EDLA+CAD VY   +VL+MEE++LN L+F L++PT LDF N+   + P +  +       LA YL E+ LQ+       PS   A C+ +A+
Sbjct:  273 VFSFLVTA-----KDLQSMAQVSKKWKE-LTSRRSLYRSLPSVTPEGSVNWINFKNLGIKNKGTEGTCIKCCQRSTGKILAIKKARVFPKGEGVPYYMLRELAVLKGIKHDHIASLELISLAKDELHVFFPYVDKTLHEVINPTG--------------DPTGGRV-----LPESVIRKLLHQLLDAIAYCHRRGVLHRNLKPKHLLIKTSDTAN----------LSDAILQISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRGYSSAVDIWSIGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSETWPGFSSLPNYHFEFPHWKRRPLN----RLFPRISNLGIDLLTKLLVYNPDQRISAEDALRHPYFSNEALGFLSLTPKIPMDQMCYTMSRARVGPTPEHVALFHAYLRQTELESWKEIKYLSRQKTLRPAHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRYLDIVMVKKTQFQLLGATCLHVASKCEDVSYIGVEDLAMCADNVYTSVEVLEMEEKLLNTLNFTLSVPTALDFLNIYERMIPPVQKK----TTMLAHYLLELALQEYQFLKYLPSVVAACCLSMAM 832          
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Match: A0A8K1CKM1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKM1_PYTOL)

HSP 1 Score: 500 bits (1287), Expect = 7.390e-164
Identity = 289/610 (47.38%), Postives = 372/610 (60.98%), Query Frame = 1
Query:    4 VFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLIDA---------DVPFSGGSSGXXXXXXVTRPQPGPAHNAAAAGAPARARGVQRGG-RAVR-AAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLAL 1800
            +FSF V+      E+      V RRWR+ L S   L R +P  LP   +NW  F+ LG K  GTEG CF+C  R+TGR LA+KKARV+P+GEGVPYYMLRELAVL+ ++H +++ L  +SL   +L VFF FV +TLH+ INP                D   G       + +R ++ LL QLL A+A CHRRGVLHRNLKPKH+L++  +           D L  A L +SDFALVR    P+R YT EVVTLWYRPPE+LMG   Y+ AVD+WS GCIFAEMA G+PLFTGISEIDQLFQIFS+L TP + +WP F +LPNY F FP+W  R         FP +    +DLL ++ TY+P  RITAE+ALRHPY  +A          +P    +         T P+     ++         R  +R   + ++  +    LRP HRSMLVDWL+EVVDVFEMC R+AFLAV + DR+L    V + R+QLLGATCLH+ASKCEDV+YIG+EDLA+CAD VY   +VL MEE++LN L+F L+IPT LDF N+   + P +  +       LA YL E+ LQ+       PS     C+ +A+
Sbjct:  261 IFSFLVSS-----EDFPNMGLVSRRWRE-LTSRRSLCRALPSILPDGSVNWLNFQNLGIKNKGTEGTCFKCHQRSTGRILAMKKARVFPKGEGVPYYMLRELAVLKGIKHDHIATLEMISLARDELHVFFPFVDKTLHEIINPTG--------------DPSGGRV-----LSERVIRRLLHQLLDAIAYCHRRGVLHRNLKPKHLLIKTADL----------DTLEDAVLQISDFALVRATGIPKRTYTMEVVTLWYRPPEILMGVRGYSSAVDIWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSESWPGFRSLPNYHFEFPNWRRRPLN----RLFPNISDLGIDLLSKLLTYNPDHRITAEDALRHPYFSEAAPSIEALTPTIPMDQMAYVMNRLRSSTIPEHVELFHS-------HLRQTERESWKEIKYLSRQKTLRPAHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRFLDIVMVKKTRFQLLGATCLHVASKCEDVSYIGVEDLAMCADNVYTSAEVLKMEEKLLNTLNFTLSIPTALDFLNIYERMIPPIQKKTS----MLAHYLLELALQEYQFLKFLPSVVATCCLSMAM 820          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CHI3_9STRA0.000e+0100.00Kinase-like domain-containing protein (Fragment) n... [more]
W4GIX2_9STRA2.180e-17048.54Cyclin-F n=4 Tax=Aphanomyces astaci TaxID=112090 R... [more]
A0A418ASX6_9STRA5.150e-16948.29Cyclin-F n=1 Tax=Aphanomyces invadans TaxID=157072... [more]
A0A067D956_SAPPC2.350e-16748.44Cyclin-F n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A0... [more]
A0A6G0N017_9STRA2.840e-16747.43Cyclin-F n=3 Tax=Phytophthora fragariae TaxID=5398... [more]
G4YQ15_PHYSP4.350e-16647.26Cyclin-F n=20 Tax=Phytophthora TaxID=4783 RepID=G4... [more]
A0A0N7L3C9_PLAHL2.500e-16547.10Cyclin-F n=1 Tax=Plasmopara halstedii TaxID=4781 R... [more]
A0A3F2RSE3_9STRA3.490e-16446.93Cyclin-F n=1 Tax=Phytophthora kernoviae TaxID=3254... [more]
A0A3M6VPZ6_9STRA5.180e-16447.10Cyclin-F n=1 Tax=Peronospora effusa TaxID=542832 R... [more]
A0A8K1CKM1_PYTOL7.390e-16447.38Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_260contigContig_260:59427..65482 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|154281|gw1.260.10.1
DescriptionCyclin-dependent kinase with F-box domain. Source PGD
COG categoryD
Max annot lvl121069|Pythiales
EggNOG OGsCOG5024@1|root,KOG0594@1|root,KOG0594@2759|Eukaryota,KOG0654@2759|Eukaryota,1MF06@121069|Pythiales
Evalue7.99e-166
Seed ortholog36331.EPrPI00000016942
Hectar predicted targeting categoryother localisation
TranscriptId154603
TrackFilteredModels1
ProteinId154281
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|154281gene_18457Tribonema minus UTEX_B_3156 geneContig_260 59427..65482 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|154281Trimin1|154281|gw1.260.10.1Tribonema minus UTEX_B_3156 polypeptideContig_260 59427..65482 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18457_1exon_18457_1Tribonema minus UTEX_B_3156 exonContig_260 59427..59681 +
exon_18457_2exon_18457_2Tribonema minus UTEX_B_3156 exonContig_260 60722..60954 +
exon_18457_3exon_18457_3Tribonema minus UTEX_B_3156 exonContig_260 61105..61395 +
exon_18457_4exon_18457_4Tribonema minus UTEX_B_3156 exonContig_260 61908..62160 +
exon_18457_5exon_18457_5Tribonema minus UTEX_B_3156 exonContig_260 62930..63058 +
exon_18457_6exon_18457_6Tribonema minus UTEX_B_3156 exonContig_260 63229..63379 +
exon_18457_7exon_18457_7Tribonema minus UTEX_B_3156 exonContig_260 63465..63573 +
exon_18457_8exon_18457_8Tribonema minus UTEX_B_3156 exonContig_260 64130..64259 +
exon_18457_9exon_18457_9Tribonema minus UTEX_B_3156 exonContig_260 64587..64652 +
exon_18457_10exon_18457_10Tribonema minus UTEX_B_3156 exonContig_260 65252..65482 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18457CDS_18457Tribonema minus UTEX_B_3156 CDSContig_260 59427..59681 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18457 ID=mRNA_18457|Name=jgi.p|Trimin1|154281|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1848bp|location=Sequence derived from alignment at Contig_260:59427..65482+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CAGGTTTTCTCCTTCTTTGTGAACCAGCATGGCGTGGATGAGGAGGAGGT
GCACGTGGCGAAGCAGGTGTGCCGGCGGTGGCGGGACACGCTCGGGAGTG
CGACGCTGCTGTGGCGTGACGTGCCATGGGAGCTGCCGGGAAGGGGGTTG
AATTGGGCGCGCTTTGAGTGCTTGGGAAAGAAGGCCTCTGGTACAGAGGG
AATATGCTTCAGGTGCCGGGATCGCGCCACTGGCAGGGAGCTGGCGCTGA
AGAAGGCGCGCGTCTACCCGCAGGGCGAGGGCGTCCCCTACTACATGCTG
CGCGAGCTGGCGGTGCTCCGCGACCTGCGCCACCCCAACGTCTCGCGCCT
GCGGCACGTCTCCCTGCACGACCACCAGCTGCGCGTCTTCTTTGACTTTG
TGCCGCAAACGCTGCACGACTTCATCAACCCGCCGGCGGCGGCGGCTGCG
GCAGCGCACAGCAGCGGCGGCGGCGGCGGCGACGCTTTCTCGGGCACGGC
GCAGCGGCCGACGCCGGTGCCGCAGCGCCACCTGCAGCCGCTGCTGCGGC
AGCTGCTGCTCGCCGTGGCGGCGTGCCACCGGCGCGGCGTGCTGCACCGC
AATCTGAAGCCGAAGCACGTGCTCGTGCGGCCGCGGGAGGGCGCGGCGGC
TGCGGGGGGCGCGGCGGGCGGCGACGCGCTCGCGGGCGCGCACCTGCTGC
TCAGCGACTTTGCGCTGGTGCGGCTCGCGTCGTATCCGCGGCGCGCGTAC
ACGAGCGAGGTGGTGACCCTCTGGTACAGGCCGCCGGAGCTCCTCATGGG
CGCCGAGAAGTACACGCCCGCGGTCGACATGTGGTCCGCGGGCTGCATCT
TTGCGGAGATGGCGCTCGGGCGGCCGCTGTTCACGGGCATCAGCGAGATC
GACCAGCTGTTCCAGATCTTCAGCAGGCTCGGCACGCCCGACGCGCGCGC
GTGGCCCGACTTCACGGCGCTGCCCAACTACTCGTTCGCGTTCCCGCACT
GGGGCCTGCGGGTGAGCGCCGCCGCCGCCGCCTCCGCATTCCCGACGCTG
GAGCCGCGCGCAGTGGACCTGCTCGATCGAATGTTTACCTATGACCCAGC
GCGCCGCATCACCGCGGAGGAGGCGTTGCGACACCCGTACCTCATCGACG
CCGACGTGCCATTCAGCGGCGGCAGCAGCGGCGGCGGCGGCGCCGCTGCT
GTCACGCGGCCCCAGCCAGGACCTGCTCACAATGCGGCGGCCGCCGGCGC
GCCTGCGCGTGCCCGAGGGGTGCAGCGAGGGGGCCGTGCTGTACGTGCGG
CACCTGCATCGGCGCTGCGGCCCGACCACCGCAGCATGCTGGTGGACTGG
CTGGTGGAGGTCGTGGACGTGTTTGAGATGTGTCAGCGCTCGGCGTTTCT
GGCGGTCGCGCATATGGACAGGTACCTCGCGCGCGCGCCCGTGTCGCGCA
AGCGCTACCAGCTCCTGGGCGCGACGTGCCTGCACATCGCCAGCAAGTGC
GAGGATGTGGCGTACATTGGCATCGAGGACCTTGCGCTGTGCGCCGACAA
GGTCTACCAGCCCAAGGACGTGCTCGACATGGAGGAGCGGGTCCTCAACG
CGCTGGACTTTCAGCTGGCCATCCCCACGCCGCTCGACTTCTGCAACCTC
GCGCTGGAGCTGTCGCCGGGGCTTGCCGCACGGCGCGGCGGGCGCGTGGT
GCACCTCGCGCAGTACCTCGCGGAGATCACGCTGCAGGACGCGCACCTCG
CGGCGGCGCCGCCCAGCGCCGCCGGCGCCGCGTGCGTCGTCCTCGCGCTC
GCGCTGCTGCGCGAGGCGCCGGCGTGGGGCGCGGGGCTCGCGCGCGTC
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protein sequence of jgi.p|Trimin1|154281

>Trimin1|154281|gw1.260.10.1 ID=Trimin1|154281|gw1.260.10.1|Name=jgi.p|Trimin1|154281|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=616bp
QVFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGL
NWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYML
RELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAAAAA
AAHSSGGGGGDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHR
NLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAY
TSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEI
DQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTL
EPRAVDLLDRMFTYDPARRITAEEALRHPYLIDADVPFSGGSSGGGGAAA
VTRPQPGPAHNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDW
LVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKC
EDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNL
ALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLAL
ALLREAPAWGAGLARV
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mRNA from alignment at Contig_260:59427..65482+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18457 ID=mRNA_18457|Name=jgi.p|Trimin1|154281|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6056bp|location=Sequence derived from alignment at Contig_260:59427..65482+ (Tribonema minus UTEX_B_3156 )
CAGGTTTTCTCCTTCTTTGTGAACCAGCATGGCGTGGATGAGGAGGAGGT GCACGTGGCGAAGCAGGTGTGCCGGCGGTGGCGGGACACGCTCGGGAGTG CGACGCTGCTGTGGCGTGACGTGCCATGGGAGCTGCCGGGAAGGGGGTTG AATTGGGCGCGCTTTGAGTGCTTGGGAAAGAAGGCCTCTGGTACAGAGGG AATATGCTTCAGGTGCCGGGATCGCGCCACTGGCAGGGAGCTGGCGCTGA AGAAGGTAAGCCTATGTCGAGGTCAGATGACTCAAAGTCATTGAAAAGGC GCACCACGTATCCGAAAGCAACTACGCTGCTGCACAGCCACCGCAGCGTA GACCGTGCAGATATCGCTCAACGTCAACTACGGCCTGAGCTGTCAGATGC TAACGGAGCAGCTCGCAGCAAAGTTCAAGAGGTTCGGAGCCACCGTTGGC GAATTGCGTAATCTCATGGTACACTCTGTGAACTCGATACAAGCTGTGCG ACCAATTGGTGCACGCAATCCTGCTGCATTACTAGTGCTCTACGTACAGC TTGAACATGCCTGATGATAAATTGGGCCATGACGCCAACTTGGCACAAGG GCCGGCGTTACCAAGTTGCCCGCCATGGTCTCCCCAAAGCTGTACGACAT GGATGGGCTGAGGCGCAGCATGGTGCTGGCAGCACACAGCACACGCGCAA AAGCGTTGCAAGGCCTGGCCTGTAATCAGAATGCCACTAATGTTGAAAAA GCGTTGCACATGACCATATGGTTGTCGCCGGTGAAAGGTGTGCCTGGGCG CCTCTTGAATCCCCGCGCGTGTGTACTATCGTGGCGGTGCCAAGTCAGAA CGCTATTGAGAACGTGTCTAATGTGCACGGCTTAGCAGCTGGCTGGGTCT CAACTTGCATGTGCCCTTCGCACCTGTGGTCTGCGCTCACGGAACCCAGC GGTAACACGTAGAGCATTGCTCACTCCGTTGCGGAAATGCCATTGCAGAA AAACAGCGCATTCGCATTCAGTGTAACGCAAAACCTGCAACAGCGCAACA TTGCACAGGTGTCGACGTTGGACAGGAATGCTGCATGACAATGAAGCTTG AAAGCGCATACCGCCTCCATCACCCGCGAACGCCACCGCTGCCCTGCAAG CTGGCTGCGACCATGCCGCACCGTACGCTGCGGTCACGTTGTTGCAGCGC GTACGCGCATCCCAGCTCCCCATTCCACGGGCGCTCCCTCGATGTGACGA TTTCGGCGATGCTCATCGCACATGCCCCCCCCCCCCCCTGCACAGGCGCG CGTCTACCCGCAGGGCGAGGGCGTCCCCTACTACATGCTGCGCGAGCTGG CGGTGCTCCGCGACCTGCGCCACCCCAACGTCTCGCGCCTGCGGCACGTC TCCCTGCACGACCACCAGCTGCGCGTCTTCTTTGACTTTGTGCCGCAAAC GCTGCACGACTTCATCAACCCGCCGGCGGCGGCGGCTGCGGCAGCGCACA GCAGCGGCGGCGGCGGCGGCGACGCTTTGTTTGCGCTGATGCTAGGGGAT GCGGCGGCTGCGGCGGCGGAAGGAGAGGGGGGGTACGAGGCTGCTGCTGC GGCGGCGGCAGCAGCGGCGGAGGCGGACGCGGCGGCGGCGGCGGCGGCAG CGCATGAGCCCCCAGGCAGCCCTTCCAGCTCGGGCACGGCGCAGCGGCCG ACGCCGGTGCCGCAGCGCCACCTGCAGCCGCTGCTGCGGCAGCTGCTGCT CGCCGTGGCGGCGTGCCACCGGCGCGGCGTGCTGCACCGCAATCTGAAGC CGAAGCACGTGCTCGTGCGGCCGCGGGAGGGCGCGGCGGCTGCGGGGGGC GCGGCGGGCGGCGACGCGCTCGCGGGCGCGCACCTGCTGCTCAGCGACTT TGCGCTGGTGCGGCTCGCGTCGTATCCGCGGCGCGCGTACACGAGCGAGG TGGTGACCCTCTGGTACAGGTACGTGCCGACTGGCTGCCTGTGGCGTCTT GCGTCTGTGCTGATGGCAGCAGTCGTGCGCAGCGCGCCGCCCGGTGCTGT GCGTGGCCAGGCCACCAGCAGCATGAGGCGTGGGGCGGCCTGAATTCTTG TGCTGTTGCGTAGCTCGTTGTTGAGTGCTGTTGCGTGCAGCCTAGCGGAT GAGCAGCGATGCGTTGTGAGCTGTTTTGGATGTGACCAGTCCTTGCGGTG TTGACGCCAGTCGTCTGCCGCACCCCGAAGGTGCGCCCCACCCACGTTTG CTCTGTTGCAGGCACGCTGACAACCCTTGTCGCGCTGCCGCTCTGCTCGG CCCTGGTAGCGCTGCTGAGATGCTGCACATCCATTCCATTTTATCATGGA AATCTCATGCGCCATCCACCCGGCCTCCGGCTGCCGCAGCGCAGCTCCGC TGCAACTCCGACCACACACCCCTTCCCCACCCGCCCTTCCCCCCACACAC CGTAACTGCCGCGAAACCGCCGCCGCCGCAGGCCGCCGGAGCTCCTCATG GGCGCCGAGAAGTACACGCCCGCGGTCGACATGTGGTCCGCGGGCTGCAT CTTTGCGGAGATGGCGCTCGGGCGGCCGCTGTTCACGGGCATCAGCGAGA TCGACCAGCTGTTCCAGATCTTCAGCAGGCTCGGCACGCCCGACGCGCGC GCGTGGCCCGACTTCACGGCGCTGCCCAACTACTCGTTCGCGTTCCCGCA CTGGGGCCTGCGGGTGAGCGCCGCCGCCGCCGCCGTGCCGAGCGCTGCTG CTGCAGCGGCCAGCGCGTACCGATTCGCACTGCCTGCTGCAGCGTAAAGT GGAGACTGTTTTCCGCGTGCGGGTCGGCCGTACTCGCCGCAGGGTCGGGG CGCTGCTGCAGCCAGCGCGCTGCAGTCCGCTGTCTGCTGCGGCATCCAGC GGAGTCCACTTTCCTCAGTGGCGGCTCAGCCATGGTCGCCGCAGTAGAGG ATCAGCGCTACAGCCGCGGCCGCTTCAGGCGCTGCCGATCTACTTGATCA CATCCCGAGGGCTGAGCTGACATTGACTGCTGCTGCTGCTGCGCCTGCCG GCGCGCTGCTGAGCTGTGCCAATGCGGCGTTGCTGCCCGCCGCTGCGACA GAGGGTGGCGGAACGGCGGCTCATCACGCTGCCTCGCGGAGCGCTGGGCA CTGGCTGTGCTATGCCGCTGCATCGCAGTTCTCGAGGGTGCTTCTGGAAA TGTTGGCAGCCGTAGGTCGACAGCCTTCATTGACCTGGCGCTGCCCCCCC TCTGCTGTCCTTGTACTGACACGGGCTGTGTGGTGTAGCGCCAGAAAGCG CGTGATGGCCGGTTCTGTGGAGGGAACAGCAGCCCGATGTCAAGGGCGCA GCGTGCAACTAGCCCCTGTGCAGGCTGCAGCGCTCAACTCGCTTCCCTGC ATGCCTGCGGAGCGAGCTCTCATGCACGTCACTTCCAGAGCCAACGCTGC GCCGCTGCCGCCGCCGCGCCCCCCCCCCCCCCCTCCGCTCGCAGAACCTG CAGTCCGCATTCCCGACGCTGGAGCCGCGCGCAGTGGACCTGCTCGATCG AATGTTTACCTATGACCCAGCGCGCCGCATCACCGCGGAGGAGGCGTTGC GACACCCGTACCTCATCGACGCCGACGTGCCAGTGCTCCGCTGCTGCCGC CGCCGCCGCCGCCTCGCCGCCGCCGCTGCGCATGCCGCCGGCAGCGGAAG CGACGGCGGCGGCGGCGGCAGCAGCAGCAGCAGCGGCAGCGACGATGATC AATTCAGCGACAGCGACAGCAGCTGCGACAGCGAAGCCGGCGGCGGCAAC AGTTCAGCGGCGGCAGCAGCGGCGGCGGCGGCGCCGCTGCTGTCACGCGG CCCCAGCCAGGACCTGCTCACAATGCGGCGGCCGCCGGCGCGCCTGCGCG TGCCCGAGGGGTGCAGCGAGGGGGCCGTGCTGTACGTGCGGCACCTGCAT CGGGTGCAGGCGCGTTTGGCAGCATCGACGGCGGCGACGGCAGCAGCGAT GGGTGGTCATGGTGGTGGCGGCGGCGGCGGCGGTCCAGCGCTGCGGCCCG ACCACCGCAGCATGCTGGTGGACTGGCTGGTGGAGGTCGTGGACGTGTTT GAGATGTGTCAGCGCTCGGCGTTTCTGGCGGTCGCGCATATGGACAGGTG AGCGACGAACGCGTGTGCTCGGGCTCATGGTTTCAACCTGGCTCCTGTGA GCTCGGGGTTGTATGAGCTGCCGAGCGCGCTGGTCGAGTTCTGCCCTGCG CAGTGCTATTTATTCAGCATGGGCTCTTCGGGCTGTGGCTGCGCGCAGCG CGCCGGCACCTCAGGCGCAGGGACAAGCGGCAATGCGGATTGCGCGTGTC CTGCTGCTGAGAGCGCCAGTGTGCTGCAGTGCCAGTGGTAGTTTCCCCGC AAGTTCAATGTTAACATCGTGCTGAGGCGCTCGCCGCCCGCCTTGATAAA TGTCGCTCGCAGTCACCGCTTTGGATGGTATTGGCGCTTGCGTCAAGCGC CCTCTGTAGCGCGCGCCCTCTGTGGCGCGCACCTCGTTCTCACTGCGTCT CCGTACGCGCAGTCAGGCGACTAGCGATGCTCCGCACGCGCCCCGCATAT ATGCCCGAGTTGCCTCTGCCACAGCGTCTCTGAAAGCTTGCTGAACATCG CCCCCCCCCCCCCCCGCCCCCCCCCCCCCCCCTCCCCCTCCCCCTGTGCG CAGGTACCTCGCGCGCGCGCCCGTGTCGCGCAAGCGCTACCAGCTCCTGG GCGCGACGTGCCTGCACATCGCCAGCAAGTGCGAGGATGTGGCGTACATT GGCATCGAGGACCTTGCGCTGTGCGCCGACAAGGTGCGCGGAGCGCTCCC GCGTGCGCGATATGAGCGCTGATGCGAGCCTTGAACTCCCGCGCTCCTGT GGGCTCGCCTCTGTGGAGGCCGCGAGCAGCACGAGCGGCATTGAGCTACT GATGGTCTCGAACTGCACAAAGCGCTTTCTGACCACTGCAAATCAGTTAC ACATGGTGGTTTGTAGGTCGCTGGTGAAAGTAGCGTAGGCCATCTTCACG GCAAGAGCGCAAGCCCTGTGTTACAGTAGGGGAGTGTTTCTCTCACACCT TGAAAAGCGAGTCGTCCTCATGTGCTGAGCGCTGCTGCTGCCGTGCCCCC GGACCGGCAGGTCTACCAGCCCAAGGACGTGCTCGACATGGAGGAGCGGG TCCTCAACGCGCTGGACTTTCAGCTGGTGAGCGCGCGCGCCCGTGATGGT GACTGACTCACGCTGATGTTCAGGGCAAAGCGACTGTTCCACAGGAATGA TTATTTCTTGACAGCTCATTCGTGACGGCGTCCATTCGAGGACTGGTTCA GAAACGATGATCTCAGTCGACCGCGGCGCCAATGTCAGGTCTCCCGCCAA GAATTCGGTGGGCCTCTGATTTGCACGCTTGAAATGCGTGCCGTCGCAGC CTCAGTGTGCCGCCGTGGCGAATGTGCAGCGCGCGGCGCTAGTGGCGTGA GGCATCTTGGTGGATGCCGGTCAACGCCGGCGGCCCGCAGCTGGCCGCTT CGAGCAGCAGCATGCACCCGCAGTGCCGCAGTTTGCGTTTTCCTTGCAGG CTGAAGGTGCAAGAGCCTCGGCAAAGCAGCTGTTGTGCGCGCAGCTTGTC GAATGGCACGACGCCGCCCGTGGTCTGCTGCACGAGGCATTCATCACGCT GCTGAGCGTTGCTCGCGCTCACCGCGCCACGCCGCCCGTAGCCGCACCGC CGCATGCCCCGCAAGTGCGCTCACCATGCCTTGCCTCACGCATGACGCTC CCCCTCAACCCCCCCTCCCCCCCAGGCCATCCCCACGCCGCTCGACTTCT GCAACCTCGCGCTGGAGCTGTCGCCGGGGCTTGCCGCACGGCGCGGCGGG CGCGTGGTGCACCTCGCGCAGTACCTCGCGGAGATCACGCTGCAGGACGC GCACCTCGCGGCGGCGCCGCCCAGCGCCGCCGGCGCCGCGTGCGTCGTCC TCGCGCTCGCGCTGCTGCGCGAGGCGCCGGCGTGGGGCGCGGGGCTCGCG CGCGTC
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Coding sequence (CDS) from alignment at Contig_260:59427..65482+

>mRNA_18457 ID=mRNA_18457|Name=jgi.p|Trimin1|154281|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1848bp|location=Sequence derived from alignment at Contig_260:59427..65482+ (Tribonema minus UTEX_B_3156 )
CAGGTTTTCTCCTTCTTTGTGAACCAGCATGGCGTGGATGAGGAGGAGGT
GCACGTGGCGAAGCAGGTGTGCCGGCGGTGGCGGGACACGCTCGGGAGTG
CGACGCTGCTGTGGCGTGACGTGCCATGGGAGCTGCCGGGAAGGGGGTTG
AATTGGGCGCGCTTTGAGTGCTTGGGAAAGAAGGCCTCTGGTACAGAGGG
AATATGCTTCAGGTGCCGGGATCGCGCCACTGGCAGGGAGCTGGCGCTGA
AGAAGGCGCGCGTCTACCCGCAGGGCGAGGGCGTCCCCTACTACATGCTG
CGCGAGCTGGCGGTGCTCCGCGACCTGCGCCACCCCAACGTCTCGCGCCT
GCGGCACGTCTCCCTGCACGACCACCAGCTGCGCGTCTTCTTTGACTTTG
TGCCGCAAACGCTGCACGACTTCATCAACCCGCCGGCGGCGGCGGCTGCG
GCAGCGCACAGCAGCGGCGGCGGCGGCGGCGACGCTTTCTCGGGCACGGC
GCAGCGGCCGACGCCGGTGCCGCAGCGCCACCTGCAGCCGCTGCTGCGGC
AGCTGCTGCTCGCCGTGGCGGCGTGCCACCGGCGCGGCGTGCTGCACCGC
AATCTGAAGCCGAAGCACGTGCTCGTGCGGCCGCGGGAGGGCGCGGCGGC
TGCGGGGGGCGCGGCGGGCGGCGACGCGCTCGCGGGCGCGCACCTGCTGC
TCAGCGACTTTGCGCTGGTGCGGCTCGCGTCGTATCCGCGGCGCGCGTAC
ACGAGCGAGGTGGTGACCCTCTGGTACAGGCCGCCGGAGCTCCTCATGGG
CGCCGAGAAGTACACGCCCGCGGTCGACATGTGGTCCGCGGGCTGCATCT
TTGCGGAGATGGCGCTCGGGCGGCCGCTGTTCACGGGCATCAGCGAGATC
GACCAGCTGTTCCAGATCTTCAGCAGGCTCGGCACGCCCGACGCGCGCGC
GTGGCCCGACTTCACGGCGCTGCCCAACTACTCGTTCGCGTTCCCGCACT
GGGGCCTGCGGGTGAGCGCCGCCGCCGCCGCCTCCGCATTCCCGACGCTG
GAGCCGCGCGCAGTGGACCTGCTCGATCGAATGTTTACCTATGACCCAGC
GCGCCGCATCACCGCGGAGGAGGCGTTGCGACACCCGTACCTCATCGACG
CCGACGTGCCATTCAGCGGCGGCAGCAGCGGCGGCGGCGGCGCCGCTGCT
GTCACGCGGCCCCAGCCAGGACCTGCTCACAATGCGGCGGCCGCCGGCGC
GCCTGCGCGTGCCCGAGGGGTGCAGCGAGGGGGCCGTGCTGTACGTGCGG
CACCTGCATCGGCGCTGCGGCCCGACCACCGCAGCATGCTGGTGGACTGG
CTGGTGGAGGTCGTGGACGTGTTTGAGATGTGTCAGCGCTCGGCGTTTCT
GGCGGTCGCGCATATGGACAGGTACCTCGCGCGCGCGCCCGTGTCGCGCA
AGCGCTACCAGCTCCTGGGCGCGACGTGCCTGCACATCGCCAGCAAGTGC
GAGGATGTGGCGTACATTGGCATCGAGGACCTTGCGCTGTGCGCCGACAA
GGTCTACCAGCCCAAGGACGTGCTCGACATGGAGGAGCGGGTCCTCAACG
CGCTGGACTTTCAGCTGGCCATCCCCACGCCGCTCGACTTCTGCAACCTC
GCGCTGGAGCTGTCGCCGGGGCTTGCCGCACGGCGCGGCGGGCGCGTGGT
GCACCTCGCGCAGTACCTCGCGGAGATCACGCTGCAGGACGCGCACCTCG
CGGCGGCGCCGCCCAGCGCCGCCGGCGCCGCGTGCGTCGTCCTCGCGCTC
GCGCTGCTGCGCGAGGCGCCGGCGTGGGGCGCGGGGCTCGCGCGCGTC
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