mRNA_18457 (mRNA) Tribonema minus UTEX_B_3156
|
Overview
Homology
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Match: A0A836CHI3_9STRA (Kinase-like domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHI3_9STRA) HSP 1 Score: 1174 bits (3038), Expect = 0.000e+0 Identity = 616/616 (100.00%), Postives = 616/616 (100.00%), Query Frame = 1
Query: 1 QVFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLIDADVPFSGGSSGXXXXXXVTRPQPGPAHNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLALALLREAPAWGAGLARV 1848
QVFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLIDADVPFSGGSSGXXXXXXVTRPQPGPAHNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLALALLREAPAWGAGLARV
Sbjct: 1 QVFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLIDADVPFSGGSSGXXXXXXVTRPQPGPAHNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLALALLREAPAWGAGLARV 616
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Match: W4GIX2_9STRA (Cyclin-F n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GIX2_9STRA) HSP 1 Score: 518 bits (1334), Expect = 2.180e-170 Identity = 299/616 (48.54%), Postives = 373/616 (60.55%), Query Frame = 1
Query: 4 VFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLID-------------ADVPFS----GGSSGXXXXXXVTRPQPGPAHNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLAL 1800
VFSF V ++V+ + V +RWR L S LWR +P G+NW F LG K GTEG C+RC R+TGR LA+K+ARV+P+GEGVPYYMLRELAVL+ ++HP+++ L +SL +L VFF +V +TLH+ INP + D G +P+ ++ L QLL A+A CHRRGVLHRNLKPKH+L+ + D L A L +SDFALVR PRR YT EVVTLWYRPPE+LMG Y+PAVD+WS GCIFAEMA G+PLFTGISEIDQLFQIFS+L TP A WP FT LPNY F FP+W R + FPTL +DLL ++ TYDP RI+AE ALRHPY AD+ F+ + G V H A+ R V R +LRP HRSMLVDWL+EVVDVFEMC R+AFLAV + DRYL V + ++QLLGATCLH+ASKCEDV+YIG+EDL++CAD VY DVL MEE +LN L+F L++PT LDF N+ ++ P L + LAQYL+E+ LQ+ PS C+ LA+
Sbjct: 293 VFSFLVYS-----DDVYQMQLVSKRWRQ-LTSTPSLWRALPDVTADGGINWLNFRNLGIKNKGTEGTCYRCFQRSTGRVLAMKRARVFPKGEGVPYYMLRELAVLQGIKHPHIASLEMISLAKDELHVFFPYVDKTLHEVINPTS--------------DPSGGRV-----LPEPQVRRFLHQLLDAIAHCHRRGVLHRNLKPKHLLIDTKSS----------DELDDAELRISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRSYSPAVDIWSIGCIFAEMAQGKPLFTGISEIDQLFQIFSKLATPTAATWPSFTTLPNYRFEFPNWTSRPWS----RLFPTLSDLGLDLLSKLLTYDPDERISAENALRHPYFAGFQTFPTLVPSIPMADMRFAMRRAALADGGASNVQVIPEHIDLFHAYLRESEVAQWRDVNYLSRK----RTQSLRPIHRSMLVDWLIEVVDVFEMCLRTAFLAVHYTDRYLDTEMVKKTKFQLLGATCLHVASKCEDVSYIGVEDLSMCADNVYTSVDVLKMEEHLLNTLNFTLSVPTVLDFVNIYQKMMPPLTQK----TAMLAQYLSELALQEYRFLKYLPSCVATCCLSLAM 861
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Match: A0A418ASX6_9STRA (Cyclin-F n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418ASX6_9STRA) HSP 1 Score: 513 bits (1320), Expect = 5.150e-169 Identity = 297/615 (48.29%), Postives = 370/615 (60.16%), Query Frame = 1
Query: 4 VFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLIDADVPFSGGSSGXXXXXXVTRPQPGPA----------------HNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLAL 1800
VFSF V ++V+ + V +RWR+ L S LWR +P +NW F LG K GTEG C+RC R+TGR LA+K+ARV+P+GEGVPYYMLRELAVL+ ++HPN++ L +SL + +L VFF FV +TLH+ INP + D G +P+ ++ L QLL A+A CHRRGVLHRNLKPKH+L+ D L A L +SDFALVR PRR YT EVVTLWYRPPE+LMG Y+PAVD+WS GCIFAEMA G+PLFTGISEIDQLFQIFS+L TP WP+FT LPNY F FP+W R A FP + +DLL ++ TY+P RI+AE ALRHPY FSG + + G H+ A + ++ R LRP HRSMLVDWL+EVVDVFEMC R+AFLAV + DR+L V + +QLLGATCLH+ASKCEDV+YIG+EDL++CAD VY DVL MEE++LN L+F LA+PT LDF N+ ++ P L R LAQYLAE+ LQ+ PS C+ LAL
Sbjct: 106 VFSFLVYS-----DDVYQMQLVSKRWRE-LTSTPSLWRMLPDVTADGSINWLNFRNLGIKNKGTEGTCYRCFQRSTGRMLAMKRARVFPKGEGVPYYMLRELAVLQGIKHPNIASLEMISLANDELHVFFPFVDKTLHEIINPTS--------------DPNGGRI-----LPEHQVRRFLHQLLDAIAHCHRRGVLHRNLKPKHLLIDTDSP----------DELDNAELRISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRSYSPAVDIWSIGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTRDTWPEFTTLPNYGFDFPNWKRRPWA----RLFPNISDLGLDLLSKLLTYNPDERISAESALRHPY-------FSGSHAFPTLLPSIPMINMGFTLQRVYESNIPEHINLFHSYLRDSELALWKDIKYLSRQ------KTLRPIHRSMLVDWLIEVVDVFEMCLRTAFLAVHYTDRFLDTVMVKKAMFQLLGATCLHVASKCEDVSYIGVEDLSMCADNVYTSVDVLKMEEQLLNTLNFTLAVPTVLDFLNIYQKMMPPLQKR----TAMLAQYLAELALQEYRFLRYLPSCVATCCLSLAL 664
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Match: A0A067D956_SAPPC (Cyclin-F n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D956_SAPPC) HSP 1 Score: 508 bits (1307), Expect = 2.350e-167 Identity = 295/609 (48.44%), Postives = 372/609 (61.08%), Query Frame = 1
Query: 4 VFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLIDADVPFSGGSSGXXXXXX----------VTRPQPGPAHNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLAL 1800
VFSF V G D+ +H + V +RWR+ L S T L+R VP P +NW F LG K GTEG C+RC R++G+ LA+K+ARV+P+GEGVPYYMLRELAVL+ +RHP+++ L +SL +L VFF +V +TLH+ INP + D G +P+ ++ LL QLL A+A CHRRGVLHRNLKPKH+L+ D A L +SDFALVR PRR YT EVVTLWYRPPE+LMG ++Y+PAVD+WS GCIFAEMA G+PLFTGISEIDQLFQIFS+L TP + WP FT+LPNY F FP+W R FP + P +DLL ++ TY+P RI+AE ALRHPY F S+G + R G A R ++ + LRP HRSMLVDWL+EVVDVFEMC R+AFLAV + DR+L V + ++QLLGATCLH+ASKCEDV+YIG+EDL++CAD VY VL MEE++LN L+F LA+PT LDF N+ P L + LAQYL+E+ LQ+ PS C+ LAL
Sbjct: 221 VFSFLV---GTDD--LHNMQLVSKRWRE-LTSHTSLYRHVPDTTPDGTINWLNFRNLGIKNKGTEGTCYRCYQRSSGKVLAMKRARVFPKGEGVPYYMLRELAVLQGIRHPHIASLEMISLAKDELHVFFPYVDKTLHEIINPTS--------------DPNGGRV-----LPEHQIRRLLHQLLDAIAYCHRRGVLHRNLKPKHLLIDTDVA----------DNYDNATLRISDFALVRATGIPRRQYTMEVVTLWYRPPEILMGEKQYSPAVDVWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSATWPAFTSLPNYRFEFPNWKPRPLD----RLFPHISPLGLDLLGKLLTYNPDARISAENALRHPY-------FDAASAGVPRLLPSIPMTDMAFTLHRQYEGNPEYMDLFHAHLRDAELKLCKEVKYLSRQKTLRPLHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRFLDVVMVKKTKFQLLGATCLHVASKCEDVSYIGVEDLSMCADNVYTSMQVLQMEEQLLNTLNFTLAVPTALDFLNIYQRSMPTLEKKTS----MLAQYLSELALQEYSFLKFLPSVVATCCLSLAL 779
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Match: A0A6G0N017_9STRA (Cyclin-F n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0N017_9STRA) HSP 1 Score: 509 bits (1310), Expect = 2.840e-167 Identity = 286/603 (47.43%), Postives = 374/603 (62.02%), Query Frame = 1
Query: 4 VFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLID---ADVPFSGGSSGXXXXXXVTRPQPGPA-HNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLAL 1800
VFSF V + + +V ++W+D L S L+R +P P +NW F+ LG K GTEG C +C R+TG+ LA+KKARV+P+GEGVPYYMLRELAVL+ ++H +++ L +SL +L VFF +V +TLH+ INP SG +P+ ++ LL QLL A+A CHRRGVLHRNLKPKH+L++ + D L+ A L +SDFALVR PRR YT EVVTLWYRPPE+LMG Y+ AVD+WS GCIFAEMA G+PLFTGISEIDQLFQIFS+L TP + WP F++LPNY F FPHW R FP + +DLL ++ Y+P +RITAE+ALRHPY D A +P + ++R + GP + A R ++ + LRP HRSMLVDWL+EVVDVFEMC R+AFLAV + DRYL V + ++QLLGATCLH+ASKCEDV+YIG+EDLA+CAD VY +VL+MEE++LN L+F L++PT LDF N+ + P + + LA YL E+ LQ+ PS A C+ +A+
Sbjct: 263 VFSFLVTANDLKS-----MSEVSKKWKD-LTSRRSLYRSLPSVTPEGSVNWINFKNLGVKNKGTEGTCIKCCQRSTGKILAMKKARVFPKGEGVPYYMLRELAVLKGIKHDHIASLELISLAKDELHVFFPYVDKTLHEIINP-------------------SGDPNGGRVLPEAVIRKLLHQLLDAIAYCHRRGVLHRNLKPKHLLIKTSDP----------DNLSDATLQISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRGYSSAVDIWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSETWPGFSSLPNYHFEFPHWKRRPLN----RLFPGISDLGIDLLTKLLVYNPDQRITAEDALRHPYFSDEAPAFLPLTPKIPMDQMCYTMSRARIGPTPEHVELFHAYLRQTEMESWKEIKYLSRQKTLRPAHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRYLDIVMVKKTQFQLLGATCLHVASKCEDVSYIGVEDLAMCADNVYTSVEVLEMEEKLLNTLNFTLSVPTALDFLNIYERMIPPIQKKTS----KLAHYLLELALQEYQFLKYLPSVVAACCLSMAM 822
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Match: G4YQ15_PHYSP (Cyclin-F n=20 Tax=Phytophthora TaxID=4783 RepID=G4YQ15_PHYSP) HSP 1 Score: 506 bits (1302), Expect = 4.350e-166 Identity = 285/603 (47.26%), Postives = 373/603 (61.86%), Query Frame = 1
Query: 4 VFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLID---ADVPFSGGSSGXXXXXXVTRPQPGPA-HNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLAL 1800
VFSF V +++ +V ++W+D L S L+R +P P +NW F+ LG K GTEG C +C R+TG+ LA+KKARV+P+GEGVPYYMLRELAVL+ ++H +++ L +SL +L VFF +V +TLH+ INP SG +P+ ++ LL QLL A+A CHRRGVLHRNLKPKH+L++ + D L+ A L +SDFALVR PRR YT EVVTLWYRPPE+LMG Y+ AVD+WS GCIFAEMA G+PLFTGISEIDQLFQIFS+L TP + WP F++LPNY F FPHW R FP + +DLL ++ Y+P +RITAE+ALRHPY D A +P + ++R + GP + A R + + LRP HRSMLVDWL+EVVDVFEMC R+AFLAV + DRYL V + ++QLLGATCLH+ASKCEDV+YIG+EDLA+CAD VY +VL+MEE++LN L+F L++PT LDF N+ + P + + LA YL E+ LQ+ PS C+ +A+
Sbjct: 262 VFSFLVTA-----DDLMSMSEVSKKWKD-LTSRRSLYRSLPSVTPEGSVNWINFKNLGIKNKGTEGTCIKCSQRSTGKILAMKKARVFPKGEGVPYYMLRELAVLKGIKHDHIASLELISLAKDELHVFFPYVDKTLHEIINP-------------------SGDPNGGRVLPEAVIRKLLHQLLDAIAYCHRRGVLHRNLKPKHLLIKTSDP----------DNLSDATLQISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRGYSSAVDIWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSETWPGFSSLPNYHFEFPHWKRRPLN----RLFPGISDLGIDLLTKLLVYNPDQRITAEDALRHPYFSDEAPAFLPLTPKIPMDQMCYTMSRARIGPTPEHVELFHAYLRQTELDSWKEIKYLSRQKTLRPAHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRYLDIVMVKKTQFQLLGATCLHVASKCEDVSYIGVEDLAMCADNVYTSVEVLEMEEKLLNTLNFTLSVPTALDFLNIYERMIPPIQKKTS----MLAHYLLELALQEYQFLKYLPSVVADCCLSMAM 821
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Match: A0A0N7L3C9_PLAHL (Cyclin-F n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L3C9_PLAHL) HSP 1 Score: 505 bits (1301), Expect = 2.500e-165 Identity = 284/603 (47.10%), Postives = 372/603 (61.69%), Query Frame = 1
Query: 4 VFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLIDAD---VPFSGGSSGXXXXXXVTRPQPGPAHNAAAAGAPARARGVQRGGRAVR-AAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLAL 1800
VFSF V + QV ++W++ L S L+R +P P +NW F+ LG K GTEG C +C R+TG+ LA+KKARV+P+GEGVPYYMLRELAVL+ ++H +++ L +SL +L VFF +V +TLH+ INP +G +P+ ++ LL QLL A+A CHRRGVLHRNLKPKH+L++ + + L+ A L +SDFALVR PRR YT EVVTLWYRPPE+LMG Y+ AVD+WS GCIFAEMA G+PLFTGISEIDQLFQIFS+L TP + WP F++LPNY F FPHW R FP + +DLL ++ TY+P +RITAE+ALRHPY D + + +TR GP A + Q + ++ + LRP HRSMLVDWL+EVVDVFEMC R+AFLAV + DRYL V + ++QLLGATCLH+ASKCEDV+YIG+EDLA+CAD VY +VL+MEE++LN L+F L++PT LDF N+ + P + + LA YL E+ LQ+ PS A C+ +A+
Sbjct: 315 VFSFLVTAKNLQN-----MAQVSKKWKE-LTSRRSLYRTLPSVTPEGSVNWINFKNLGIKNKGTEGTCIKCCQRSTGKILAMKKARVFPKGEGVPYYMLRELAVLKGIKHDHIASLELISLARDELHVFFPYVDKTLHEIINP-------------------TGDPNGGRMLPEAVIRKLLHQLLDAIAYCHRRGVLHRNLKPKHLLIKTTDP----------EKLSDATLQISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRGYSSAVDIWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSETWPGFSSLPNYHFEFPHWKRRPLN----RLFPGISDHGIDLLTKLLTYNPDQRITAEDALRHPYFSDRTSELLTLTPKIPMDQMCYTITRAWIGPTPGHVALFHAYLRQTEQESWKEIKYLSRQKTLRPAHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRYLDIVMVKKTQFQLLGATCLHVASKCEDVSYIGVEDLAMCADNVYTSVEVLEMEEKLLNTLNFTLSVPTALDFLNIYERMIPPIQKKTS----MLAHYLLELALQEYQFLKYLPSKVAACCLSMAM 874
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Match: A0A3F2RSE3_9STRA (Cyclin-F n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RSE3_9STRA) HSP 1 Score: 497 bits (1280), Expect = 3.490e-164 Identity = 283/603 (46.93%), Postives = 370/603 (61.36%), Query Frame = 1
Query: 4 VFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYL---IDADVPFSGGSSGXXXXXXVTRPQPGPA-HNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLAL 1800
VFSF V + +V +WR+ L S L+R V P +NW F+ LG K GTEG C +C R++G+ LA+KKARV+P+GEGVPYYMLRELAVL+ ++H +++ L +SL +L VFF +V +TLH+ INP D G +P+ ++ LL QLL A+A CHRRGVLHRNLKPKH+L++ + + L A L +SDFALVR PRR YT EVVTLWYRPPE+LMG Y+ AVD+WS GCIFAEMA G+PLFTGISEIDQLFQIFS+L TP + WP F++LPNY F FPHW R FP + +DLL ++ Y+P +RITAE+ALRHPY + A +P + ++R + GP + A R ++ + LRP HRSMLVDWL+EVVDVFEMC R+AFLAV + DRYL V + ++QLLGATCLH+ASKCEDV+YIG+EDLA+CAD VY +VL+MEE++LN L+F L++PT LDF N+ + P + + LA YL E+ LQ+ PS A C+ +A+
Sbjct: 151 VFSFLVTPRDLGN-----MSRVSTKWRE-LTSRRSLYRSVISVTPEGSVNWINFKNLGIKNKGTEGTCIKCSQRSSGKILAMKKARVFPKGEGVPYYMLRELAVLKGIKHDHIASLELISLAKDELHVFFPYVDKTLHEVINPTG--------------DPTGGRV-----LPEHVIRKLLHQLLDAIAYCHRRGVLHRNLKPKHLLIKTSDL----------ENLDDATLQISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRGYSSAVDIWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSETWPGFSSLPNYHFEFPHWKRRPLN----RLFPGISDLGIDLLTKLLVYNPDQRITAEDALRHPYFSNEVPAFLPLTPKIPMDQMCYTMSRARIGPTPEHVELFHAYLRQTELESWKEIKYLSRQKTLRPAHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRYLDIVMVKKTQFQLLGATCLHVASKCEDVSYIGVEDLAMCADNVYTSVEVLEMEEKLLNTLNFTLSVPTALDFLNIYERMIPPIQKKTS----MLAHYLLELALQEYQFLKYLPSVVAACCLSMAM 710
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Match: A0A3M6VPZ6_9STRA (Cyclin-F n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPZ6_9STRA) HSP 1 Score: 501 bits (1289), Expect = 5.180e-164 Identity = 284/603 (47.10%), Postives = 375/603 (62.19%), Query Frame = 1
Query: 4 VFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLIDADVPFSGGSSGXXXXXX---VTRPQPGPA-HNAAAAGAPARARGVQRGGRAVRAAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLAL 1800
VFSF V +++ QV ++W++ L S L+R +P P +NW F+ LG K GTEG C +C R+TG+ LA+KKARV+P+GEGVPYYMLRELAVL+ ++H +++ L +SL +L VFF +V +TLH+ INP D G +P+ ++ LL QLL A+A CHRRGVLHRNLKPKH+L++ + A L+ A L +SDFALVR PRR YT EVVTLWYRPPE+LMG Y+ AVD+WS GCIFAEMA G+PLFTGISEIDQLFQIFS+L TP + WP F++LPNY F FPHW R FP + +DLL ++ Y+P +RI+AE+ALRHPY + + F + ++R + GP + A A R ++ + LRP HRSMLVDWL+EVVDVFEMC R+AFLAV + DRYL V + ++QLLGATCLH+ASKCEDV+YIG+EDLA+CAD VY +VL+MEE++LN L+F L++PT LDF N+ + P + + LA YL E+ LQ+ PS A C+ +A+
Sbjct: 273 VFSFLVTA-----KDLQSMAQVSKKWKE-LTSRRSLYRSLPSVTPEGSVNWINFKNLGIKNKGTEGTCIKCCQRSTGKILAIKKARVFPKGEGVPYYMLRELAVLKGIKHDHIASLELISLAKDELHVFFPYVDKTLHEVINPTG--------------DPTGGRV-----LPESVIRKLLHQLLDAIAYCHRRGVLHRNLKPKHLLIKTSDTAN----------LSDAILQISDFALVRATGIPRRTYTMEVVTLWYRPPEILMGVRGYSSAVDIWSIGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSETWPGFSSLPNYHFEFPHWKRRPLN----RLFPRISNLGIDLLTKLLVYNPDQRISAEDALRHPYFSNEALGFLSLTPKIPMDQMCYTMSRARVGPTPEHVALFHAYLRQTELESWKEIKYLSRQKTLRPAHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRYLDIVMVKKTQFQLLGATCLHVASKCEDVSYIGVEDLAMCADNVYTSVEVLEMEEKLLNTLNFTLSVPTALDFLNIYERMIPPVQKK----TTMLAHYLLELALQEYQFLKYLPSVVAACCLSMAM 832
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Match: A0A8K1CKM1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CKM1_PYTOL) HSP 1 Score: 500 bits (1287), Expect = 7.390e-164 Identity = 289/610 (47.38%), Postives = 372/610 (60.98%), Query Frame = 1
Query: 4 VFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLNWARFECLGKKASGTEGICFRCRDRATGRELALKKARVYPQGEGVPYYMLRELAVLRDLRHPNVSRLRHVSLHDHQLRVFFDFVPQTLHDFINPPAXXXXXXXXXXXXXXDAFSGTAQRPTPVPQRHLQPLLRQLLLAVAACHRRGVLHRNLKPKHVLVRPREGAAAAGGAAGGDALAGAHLLLSDFALVRLASYPRRAYTSEVVTLWYRPPELLMGAEKYTPAVDMWSAGCIFAEMALGRPLFTGISEIDQLFQIFSRLGTPDARAWPDFTALPNYSFAFPHWGLRVSAAAAASAFPTLEPRAVDLLDRMFTYDPARRITAEEALRHPYLIDA---------DVPFSGGSSGXXXXXXVTRPQPGPAHNAAAAGAPARARGVQRGG-RAVR-AAPASALRPDHRSMLVDWLVEVVDVFEMCQRSAFLAVAHMDRYLARAPVSRKRYQLLGATCLHIASKCEDVAYIGIEDLALCADKVYQPKDVLDMEERVLNALDFQLAIPTPLDFCNLALELSPGLAARRGGRVVHLAQYLAEITLQDAHLAAAPPSAAGAACVVLAL 1800
+FSF V+ E+ V RRWR+ L S L R +P LP +NW F+ LG K GTEG CF+C R+TGR LA+KKARV+P+GEGVPYYMLRELAVL+ ++H +++ L +SL +L VFF FV +TLH+ INP D G + +R ++ LL QLL A+A CHRRGVLHRNLKPKH+L++ + D L A L +SDFALVR P+R YT EVVTLWYRPPE+LMG Y+ AVD+WS GCIFAEMA G+PLFTGISEIDQLFQIFS+L TP + +WP F +LPNY F FP+W R FP + +DLL ++ TY+P RITAE+ALRHPY +A +P + T P+ ++ R +R + ++ + LRP HRSMLVDWL+EVVDVFEMC R+AFLAV + DR+L V + R+QLLGATCLH+ASKCEDV+YIG+EDLA+CAD VY +VL MEE++LN L+F L+IPT LDF N+ + P + + LA YL E+ LQ+ PS C+ +A+
Sbjct: 261 IFSFLVSS-----EDFPNMGLVSRRWRE-LTSRRSLCRALPSILPDGSVNWLNFQNLGIKNKGTEGTCFKCHQRSTGRILAMKKARVFPKGEGVPYYMLRELAVLKGIKHDHIATLEMISLARDELHVFFPFVDKTLHEIINPTG--------------DPSGGRV-----LSERVIRRLLHQLLDAIAYCHRRGVLHRNLKPKHLLIKTADL----------DTLEDAVLQISDFALVRATGIPKRTYTMEVVTLWYRPPEILMGVRGYSSAVDIWSVGCIFAEMAQGKPLFTGISEIDQLFQIFSKLSTPTSESWPGFRSLPNYHFEFPNWRRRPLN----RLFPNISDLGIDLLSKLLTYNPDHRITAEDALRHPYFSEAAPSIEALTPTIPMDQMAYVMNRLRSSTIPEHVELFHS-------HLRQTERESWKEIKYLSRQKTLRPAHRSMLVDWLIEVVDVFEMCLRTAFLAVNYTDRFLDIVMVKKTRFQLLGATCLHVASKCEDVSYIGVEDLAMCADNVYTSAEVLKMEEKLLNTLNFTLSIPTALDFLNIYERMIPPIQKKTS----MLAHYLLELALQEYQFLKFLPSVVATCCLSMAM 820 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|154281 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_18457 ID=mRNA_18457|Name=jgi.p|Trimin1|154281|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1848bp|location=Sequence derived from alignment at Contig_260:59427..65482+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CAGGTTTTCTCCTTCTTTGTGAACCAGCATGGCGTGGATGAGGAGGAGGTback to top protein sequence of jgi.p|Trimin1|154281 >Trimin1|154281|gw1.260.10.1 ID=Trimin1|154281|gw1.260.10.1|Name=jgi.p|Trimin1|154281|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=616bp QVFSFFVNQHGVDEEEVHVAKQVCRRWRDTLGSATLLWRDVPWELPGRGLback to top mRNA from alignment at Contig_260:59427..65482+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_18457 ID=mRNA_18457|Name=jgi.p|Trimin1|154281|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=6056bp|location=Sequence derived from alignment at Contig_260:59427..65482+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_260:59427..65482+ >mRNA_18457 ID=mRNA_18457|Name=jgi.p|Trimin1|154281|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1848bp|location=Sequence derived from alignment at Contig_260:59427..65482+ (Tribonema minus UTEX_B_3156 )back to top |