mRNA_18456 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|151503 vs. uniprot
Match: A0A836CEV8_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEV8_9STRA) HSP 1 Score: 410 bits (1055), Expect = 3.010e-145 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 1 Query: 1 QVCVRVRPVLPSEEYTGTQTIISVEGNSCVLVDPTAFGAAAAVARDSGQTLDINAWARHFTFDHCFWSANIEDPHYSGQNEVYKFIGARALEQAWQGYNCTILAYGQTGSGKSYSMMGLEPVHRSQVRTEDGLIPRICESLFAEIAEATRCDGGGDGAELSFGVEVSYLEIYNEQVRDLFGPQAAPGRAPPTLRVREDP 597 QVCVRVRPVLPSEEYTGTQTIISVEGNSCVLVDPTAFGAAAAVARDSGQTLDINAWARHFTFDHCFWSANIEDPHYSGQNEVYKFIGARALEQAWQGYNCTILAYGQTGSGKSYSMMGLEPVHRSQVRTEDGLIPRICESLFAEIAEATRCDGGGDGAELSFGVEVSYLEIYNEQVRDLFGPQAAPGRAPPTLRVREDP Sbjct: 1 QVCVRVRPVLPSEEYTGTQTIISVEGNSCVLVDPTAFGAAAAVARDSGQTLDINAWARHFTFDHCFWSANIEDPHYSGQNEVYKFIGARALEQAWQGYNCTILAYGQTGSGKSYSMMGLEPVHRSQVRTEDGLIPRICESLFAEIAEATRCDGGGDGAELSFGVEVSYLEIYNEQVRDLFGPQAAPGRAPPTLRVREDP 199
BLAST of jgi.p|Trimin1|151503 vs. uniprot
Match: D7G3M1_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3M1_ECTSI) HSP 1 Score: 155 bits (392), Expect = 3.410e-40 Identity = 88/185 (47.57%), Postives = 112/185 (60.54%), Query Frame = 1 Query: 1 QVCVRVRPVLPSEEYTGTQTIISVE--GNSCVLVDPTAFGAAAAVARDSGQTLDINAWARHFTFDHCFWSANIEDPHYSGQNEVYKFIGARALEQAWQGYNCTILAYGQTGSGKSYSMMGLEPVHRSQVRTED-GLIPRICESLFAEIAEATRCDGGGDGAELSFGVEVSYLEIYNEQVRDLFGP 546 +V VRVRP+ EE TG Q ++SV+ G S +VDPTAF AA A+ RD + ++ + WA+ F+FD CF ED GQ +V++ +GA + QA+ GYN T+ AYGQTGSGKSY+MMG V ED GLIPRIC + I + F VEVSYLEIYNE +RDLF P Sbjct: 23 RVVVRVRPMSEREEATGLQGVVSVDDDGESMSVVDPTAFAAALALERDGREQVESSMWAKRFSFDRCFGG---EDDGGDGQEKVFEEVGAAVINQAFSGYNSTVFAYGQTGSGKSYTMMGTGKALDDTVDPEDHGLIPRICSGILERIDQ--------------FSVEVSYLEIYNESLRDLFNP 190
BLAST of jgi.p|Trimin1|151503 vs. uniprot
Match: UPI001B8092B0 (LOW QUALITY PROTEIN: kinesin-like protein KIF1C n=1 Tax=Onychostruthus taczanowskii TaxID=356909 RepID=UPI001B8092B0) HSP 1 Score: 143 bits (360), Expect = 6.360e-36 Identity = 89/201 (44.28%), Postives = 116/201 (57.71%), Query Frame = 1 Query: 1 QVCVRVRPVLPSEEYTGTQTIISVEGNSCVLVDPTAFGAAAAVARDSGQTLDINAWARHFTFDHCFWS-ANIEDPHYSGQNEVYKFIGARALEQAWQGYNCTILAYGQTGSGKSYSMMGL-EPVHRSQVRTEDGLIPRICESLFAEIAEATRCDGGGDGAELSFGVEVSYLEIYNEQVRDLFGPQAAPGRAPPTLRVREDP 597 +V VRVRP E + +I + GN+ + +P + +D A+HFTFDH +WS + EDP+++ Q VY+ IG L+ A++GYN ILAYGQTG+GKSY+MMG EP R G+IP++CE LFA IA AELSF VEVSYLEIY E+VRDL P++ G LRVRE P Sbjct: 7 KVAVRVRPFSARESSRQAKCVIQMRGNTTCITNPK-------LPKDG---------AKHFTFDHSYWSHTSEEDPNFASQRRVYQDIGEEMLQHAFEGYNVCILAYGQTGAGKSYTMMGRQEPGQR-------GIIPQLCEDLFARIARE-------GSAELSFSVEVSYLEIYCERVRDLLNPKSRGG-----LRVREHP 172
BLAST of jgi.p|Trimin1|151503 vs. uniprot
Match: A0A8H4VCM1_9HYPO (Kinesin-like protein n=1 Tax=Ophiocordyceps camponoti-floridani TaxID=2030778 RepID=A0A8H4VCM1_9HYPO) HSP 1 Score: 139 bits (350), Expect = 3.820e-35 Identity = 82/199 (41.21%), Postives = 109/199 (54.77%), Query Frame = 1 Query: 1 QVCVRVRPVLPSEEYTGTQTIISVEGNSCVLVDPTAFGAAAAVARDSGQTLDINAWARHFTFDHCFWSANIEDPHYSGQNEVYKFIGARALEQAWQGYNCTILAYGQTGSGKSYSMMGLEPVHRSQVRTEDGLIPRICESLFAEIAEATRCDGGGDGAELSFGVEVSYLEIYNEQVRDLFGPQAAPGRAPPTLRVREDP 597 +V VRVR LP E + + +++++ DP A + SG+T D + R F FD FWS + HY+GQ VY +G L+ + GY+ I AYGQTG+GKSY+MMG E GLIPR CE LF I A G+ A +++ V VSYLE+YNE VRDL P A PG+ P L++RE P Sbjct: 8 RVVVRVRAFLPREIHGNAECLVAMDA-----ADPQLTLLRAPSEKGSGRTRDASD--RRFAFDRSFWSHDERHGHYAGQEHVYNSLGEEFLDHNFDGYHTCIFAYGQTGAGKSYTMMGTPE--------EPGLIPRTCEDLFERIEAAH-----GESANVAYSVRVSYLEVYNEHVRDLLVPPAPPGQPPHYLKMRESP 186
BLAST of jgi.p|Trimin1|151503 vs. uniprot
Match: A0A367IUF2_RHIST (Kinesin-like protein Klp8 (Fragment) n=1 Tax=Rhizopus stolonifer TaxID=4846 RepID=A0A367IUF2_RHIST) HSP 1 Score: 130 bits (328), Expect = 1.570e-34 Identity = 83/199 (41.71%), Postives = 104/199 (52.26%), Query Frame = 1 Query: 1 QVCVRVRPVLPSEEYTGTQTIISVEGNSCVLVDPTAFGAAAAVARDSGQTLDINAWARHFTFDHCFWSANIEDPHYSGQNEVYKFIGARALEQAWQGYNCTILAYGQTGSGKSYSMMGLEPVHRSQVRTEDGLIPRICESLFAEIAEATRCDGGGDGAELSFGVEVSYLEIYNEQVRDLFGPQAAPGRAPPTLRVREDP 597 +V VR RP+ E+ +I +EGN VL P + G+ V D + FTFD +WSA+ +D Y+ Q V+ +G L+ A+ GYNC I AYGQTGSGKSYSMMG + G+IPR C LF IA A L F VEVSY+EIYNE+VRDL P R L+VRE P Sbjct: 6 KVVVRCRPLNAREKARNAPCLIRMEGNKTVLSKPVSPGST--VLEDP----------KAFTFDQSYWSADKDDIDYADQERVFNDLGKELLDHAFNGYNCCIFAYGQTGSGKSYSMMGYGE--------DKGIIPRTCHELFERIASKRE-------ANLDFQVEVSYIEIYNEKVRDLLNP-----RNKSNLKVREHP 172
BLAST of jgi.p|Trimin1|151503 vs. uniprot
Match: A0A8C0ZGX7_CYACU (Kinesin-like protein n=3 Tax=Passeriformes TaxID=9126 RepID=A0A8C0ZGX7_CYACU) HSP 1 Score: 136 bits (342), Expect = 1.840e-34 Identity = 83/201 (41.29%), Postives = 115/201 (57.21%), Query Frame = 1 Query: 1 QVCVRVRPVLPSEEYTGTQTIISVEGNSCVLVDPTAFGAAAAVARDSGQTLDINAWARHFTFDHCFWS-ANIEDPHYSGQNEVYKFIGARALEQAWQGYNCTILAYGQTGSGKSYSMMGL-EPVHRSQVRTEDGLIPRICESLFAEIAEATRCDGGGDGAELSFGVEVSYLEIYNEQVRDLFGPQAAPGRAPPTLRVREDP 597 +V VRVRP E + +I ++GN+ + +P + +D+ +HFTFD+ +WS +++DP+++ Q VY+ IG L A++GYN ILAYGQTG+GKSY+MMG EP R G+IP++CE LFA + ELSF VEVSYLEIY E+VRDL P++ G LRVRE P Sbjct: 7 KVAVRVRPFSARESSRQAKCVIQMQGNTTCITNPK-------LPKDA---------TKHFTFDYSYWSHTSVKDPNFASQRRVYQDIGEEMLAHAFEGYNVCILAYGQTGAGKSYTMMGRQEPGQR-------GIIPQLCEDLFARVTRE-------GSPELSFSVEVSYLEIYCERVRDLLNPKSRGG-----LRVREHP 172
BLAST of jgi.p|Trimin1|151503 vs. uniprot
Match: F0ZAX7_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZAX7_DICPU) HSP 1 Score: 139 bits (349), Expect = 2.030e-34 Identity = 79/199 (39.70%), Postives = 109/199 (54.77%), Query Frame = 1 Query: 1 QVCVRVRPVLPSEEYTGTQTIISVEGNSCVLVDPTAFGAAAAVARDSGQTLDINAWARHFTFDHCFWSANIEDPHYSGQNEVYKFIGARALEQAWQGYNCTILAYGQTGSGKSYSMMGLEPVHRSQVRTEDGLIPRICESLFAEIAEATRCDGGGDGAELSFGVEVSYLEIYNEQVRDLFGPQAAPGRAPPTLRVREDP 597 +V VRVRP E+ + I+ + GNS VL P+A V + T + + FTFDH +WS N DPH++ Q VY +G L+ AW+G+NC+I AYGQTGSGKSYSM+G + G+IP +CE +F I + F VEVS++EIYNE+V+DL P+ P L+VR +P Sbjct: 5 KVAVRVRPFNEREKERNAELIVDMNGNSTVLTRPSALR----VNPTAPPTAEDE---KSFTFDHSYWSFNQSDPHFASQATVYNDLGKEVLKNAWEGFNCSIFAYGQTGSGKSYSMLGYNE--------DKGIIPLVCEEMFERI----NATPASSTEQTVFKVEVSFMEIYNEKVKDLLNPK---NNKPGGLKVRNNP 181
BLAST of jgi.p|Trimin1|151503 vs. uniprot
Match: A0A8C3Y366_CATUS (Kinesin-like protein n=1 Tax=Catharus ustulatus TaxID=91951 RepID=A0A8C3Y366_CATUS) HSP 1 Score: 136 bits (342), Expect = 2.590e-34 Identity = 86/202 (42.57%), Postives = 114/202 (56.44%), Query Frame = 1 Query: 1 QVCVRVRPVLPSEEYTGTQTIISVEGNSCVLVDPTAFGAAAAVARDSGQTLDINAWARHFTFDHCFWSANI--EDPHYSGQNEVYKFIGARALEQAWQGYNCTILAYGQTGSGKSYSMMGL-EPVHRSQVRTEDGLIPRICESLFAEIAEATRCDGGGDGAELSFGVEVSYLEIYNEQVRDLFGPQAAPGRAPPTLRVREDP 597 +V VRVRP E + +I ++GN+ + +P + +D+ +HFTFD+ +WS EDP+++ Q VY+ IG L A++GYN ILAYGQTG+GKSY+MMG EP R G+IP++CE LFA IA ELSF VEVSYLEIY E+VRDL P++ G LRVRE P Sbjct: 7 KVAVRVRPFSARESSRQAKCVIQMQGNTTCITNPK-------LPKDA---------TKHFTFDYSYWSHTSVSEDPNFASQRRVYQDIGEEMLAHAFEGYNVCILAYGQTGAGKSYTMMGRQEPGQR-------GIIPQLCEDLFARIARE-------GSPELSFSVEVSYLEIYCERVRDLLNPKSRGG-----LRVREHP 173
BLAST of jgi.p|Trimin1|151503 vs. uniprot
Match: A0A0D2URY6_CAPO3 (Kinesin family member 13B n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2URY6_CAPO3) HSP 1 Score: 138 bits (348), Expect = 2.730e-34 Identity = 83/199 (41.71%), Postives = 108/199 (54.27%), Query Frame = 1 Query: 1 QVCVRVRPVLPSEEYTGTQTIISVEGNSCVLVDPTAFGAAAAVARDSGQTLDINAWARHFTFDHCFWSANIEDPHYSGQNEVYKFIGARALEQAWQGYNCTILAYGQTGSGKSYSMMGLEPVHRSQVRTEDGLIPRICESLFAEIAEATRCDGGGDGAELSFGVEVSYLEIYNEQVRDLFGPQAAPGRAPPTLRVREDP 597 +V VRVRP E ++++++EGN+ L P + A ++ F++DHCFWS N D H++ Q +VYK +G L+ A+ GYN I AYGQTGSGKSY+MMG + G+IPR+C+ LF I T D A S VEVSYLEIYNEQVRDL P + LRVRE P Sbjct: 16 KVAVRVRPFNQREIDKRCESVVTMEGNTTSLKYPMSTSDKARAGT-----------SKTFSYDHCFWSTNSTDAHFATQTQVYKALGVDVLDNAFSGYNACIFAYGQTGSGKSYTMMG--------TAEDRGVIPRLCQELFERIRARTAKD-----ANTSTKVEVSYLEIYNEQVRDLLNPSITKDK----LRVREHP 186
BLAST of jgi.p|Trimin1|151503 vs. uniprot
Match: UPI0018D51688 (kinesin-like protein KIF1C n=1 Tax=Motacilla alba alba TaxID=1094192 RepID=UPI0018D51688) HSP 1 Score: 138 bits (347), Expect = 3.490e-34 Identity = 86/201 (42.79%), Postives = 113/201 (56.22%), Query Frame = 1 Query: 1 QVCVRVRPVLPSEEYTGTQTIISVEGNSCVLVDPTAFGAAAAVARDSGQTLDINAWARHFTFDHCFWS-ANIEDPHYSGQNEVYKFIGARALEQAWQGYNCTILAYGQTGSGKSYSMMGL-EPVHRSQVRTEDGLIPRICESLFAEIAEATRCDGGGDGAELSFGVEVSYLEIYNEQVRDLFGPQAAPGRAPPTLRVREDP 597 +V VRVRP E + +I + GN+ + +P + +D +HFTFDH +WS + EDP+++ Q VY+ IG L A++GYN ILAYGQTG+GKSY+MMG EP R G+IP++CE LFA +A ELSF VEVSYLEIY E+VRDL P++ G LRVRE P Sbjct: 7 KVAVRVRPFSARESSRQAKCVIQMRGNTTCITNPK-------LPKDG---------TKHFTFDHSYWSHTSEEDPNFASQRRVYQDIGEEMLAHAFEGYNVCILAYGQTGAGKSYTMMGRQEPGQR-------GIIPQLCEDLFARVARE-------GSPELSFSVEVSYLEIYCERVRDLLNPKSRGG-----LRVREHP 172 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|151503 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_18456 ID=mRNA_18456|Name=jgi.p|Trimin1|151503|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=597bp|location=Sequence derived from alignment at Contig_260:55326..57979- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. CAGGTGTGCGTCCGGGTGCGGCCTGTGCTGCCAAGCGAGGAGTACACGGGback to top protein sequence of jgi.p|Trimin1|151503 >Trimin1|151503|gw1.260.6.1 ID=Trimin1|151503|gw1.260.6.1|Name=jgi.p|Trimin1|151503|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=199bp QVCVRVRPVLPSEEYTGTQTIISVEGNSCVLVDPTAFGAAAAVARDSGQTback to top mRNA from alignment at Contig_260:55326..57979- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_18456 ID=mRNA_18456|Name=jgi.p|Trimin1|151503|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2654bp|location=Sequence derived from alignment at Contig_260:55326..57979- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_260:55326..57979- >mRNA_18456 ID=mRNA_18456|Name=jgi.p|Trimin1|151503|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=597bp|location=Sequence derived from alignment at Contig_260:55326..57979- (Tribonema minus UTEX_B_3156 )back to top |