mRNA_18455 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|150070 vs. uniprot
Match: A0A836CFR7_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFR7_9STRA) HSP 1 Score: 257 bits (657), Expect = 2.880e-86 Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 1
Query: 1 NAYSSRSHAIFTVTFRQQRGGGAASGPVSRLNLVDLAGSERVGNTGAAGLRLREAGSINRSLAALSDVIKPPLTPSAGXXXXXXXXAFVPYRNSALTRLLRESLGGNARTVVLACVSPAAAHFEETLSTLKYAERAKAVRTHARVNE 441
NAYSSRSHAIFTVTFRQQRGGGAASGPVSRLNLVDLAGSERVGNTGAAGLRLREAGSINRSLAALSDVIKPPLTPSAGXXXXXXXXAFVPYRNSALTRLLRESLGGNARTVVLACVSPAAAHFEETLSTLKYAERAKAVRTHARVNE
Sbjct: 1 NAYSSRSHAIFTVTFRQQRGGGAASGPVSRLNLVDLAGSERVGNTGAAGLRLREAGSINRSLAALSDVIKPPLTPSAGXXXXXXXXAFVPYRNSALTRLLRESLGGNARTVVLACVSPAAAHFEETLSTLKYAERAKAVRTHARVNE 147
BLAST of jgi.p|Trimin1|150070 vs. uniprot
Match: D7G3M1_ECTSI (Kinesin motor domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3M1_ECTSI) HSP 1 Score: 156 bits (395), Expect = 1.950e-41 Identity = 103/177 (58.19%), Postives = 118/177 (66.67%), Query Frame = 1
Query: 1 NAYSSRSHAIFTVTFRQQRGGGAASG-------PVSRLNLVDLAGSERVGNTGAAGLRLREAGSINRSLAALSDVIKP---------------------PLTPSAGXXXXXXXXA---FVPYRNSALTRLLRESLGGNARTVVLACVSPAAAHFEETLSTLKYAERAKAVRTHARVN 438
N +SSRSHA+FT+TFRQ + +G S +NLVDLAGSERV +TGA GLRL+EAGSINRSLAALSDVIK P +P XXXXX A FVPYRNS LTRLL+ESLGGN+RTV+LAC+SP AH+EETL TL+YAERAK VRT A N
Sbjct: 267 NDWSSRSHAVFTLTFRQTSQAWSPTGCSYESWEACSNVNLVDLAGSERVSHTGATGLRLQEAGSINRSLAALSDVIKALSEAQRRCRPGGSAGGRSPTRPRSPGKXXXXXXAGGAGKGFVPYRNSVLTRLLKESLGGNSRTVMLACISPCDAHYEETLGTLRYAERAKRVRTRAIAN 443
BLAST of jgi.p|Trimin1|150070 vs. uniprot
Match: A0A2R5GGI7_9STRA (Kinesin-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GGI7_9STRA) HSP 1 Score: 147 bits (372), Expect = 2.400e-38 Identity = 91/150 (60.67%), Postives = 106/150 (70.67%), Query Frame = 1
Query: 1 NAYSSRSHAIFTVTFRQQRGGGAASG---PVSRLNLVDLAGSERVGNTGAAGLRLREAGSINRSLAALSDVIKPPLTPSAGXXXXXXXXAFVPYRNSALTRLLRESLGGNARTVVLACVSPAAAHFEETLSTLKYAERAKAVRTHARVNE 441
N SSRSHA+F + R+QR G A S+L LVDLAGSERV +GA G RL+EA +INRSL+ALSDVIK TP A FVPYRNSALT LL+ESLGGNA+TV+LA VSP A ++ ETLSTLKYAERAK + ARVN+
Sbjct: 351 NKESSRSHAVFQLVLRKQRDGSDAKRIEEQSSKLYLVDLAGSERVSASGATGARLKEAANINRSLSALSDVIKALTTPRAADTTGKQ---FVPYRNSALTWLLKESLGGNAKTVMLATVSPDAVNYHETLSTLKYAERAKKIVNKARVNK 497
BLAST of jgi.p|Trimin1|150070 vs. uniprot
Match: A0A482S857_9ARCH (Kinesin motor domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S857_9ARCH) HSP 1 Score: 135 bits (341), Expect = 2.810e-36 Identity = 79/147 (53.74%), Postives = 103/147 (70.07%), Query Frame = 1
Query: 1 NAYSSRSHAIFTVTFRQQRGGGAASGPVSRLNLVDLAGSERVGNTGAAGLRLREAGSINRSLAALSDVIKPPLTPSAGXXXXXXXXAFVPYRNSALTRLLRESLGGNARTVVLACVSPAAAHFEETLSTLKYAERAKAVRTHARVNE 441
NA SSRSH++F V+ Q+ + +++NLVDLAGSERV +TGA G L+E +IN+SL+AL +VI + S G F+PYRNS LTR+L+ESLGGNA T +LA +SPAA++FEETLSTLKYA RAKA++ A NE
Sbjct: 156 NADSSRSHSVFVVSIHQKDESSMGNNIFAKINLVDLAGSERVKSTGATGATLKEGANINKSLSALGNVINALVECSKGKN------TFIPYRNSKLTRVLQESLGGNAVTSMLAAMSPAASNFEETLSTLKYANRAKAIKVKAVKNE 296
BLAST of jgi.p|Trimin1|150070 vs. uniprot
Match: A0A835YLR0_9STRA (Kinesin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLR0_9STRA) HSP 1 Score: 134 bits (338), Expect = 2.300e-35 Identity = 80/147 (54.42%), Postives = 101/147 (68.71%), Query Frame = 1
Query: 1 NAYSSRSHAIFTVTFRQQRGGGAASGPVSRLNLVDLAGSERVGNTGAAGLRLREAGSINRSLAALSDVIKPPLTPSAGXXXXXXXXAFVPYRNSALTRLLRESLGGNARTVVLACVSPAAAHFEETLSTLKYAERAKAVRTHARVNE 441
N SSRSH++ +V Q+ AA ++LNLVDLAGSER +TGAAG RLRE +IN+SL+AL +VI + + G FVPYRNS LTR+L+ESLGGN+ T +LA VSPAA +F ETLSTL+YA RAKA++ A NE
Sbjct: 213 NDTSSRSHSVLSVKLHQRDASDAARSTFAKLNLVDLAGSERQKSTGAAGARLREGANINKSLSALGNVINALVEVAKGRK------VFVPYRNSKLTRVLQESLGGNSLTAMLAAVSPAACNFAETLSTLQYASRAKAIQLRAVKNE 353
BLAST of jgi.p|Trimin1|150070 vs. uniprot
Match: F0ZAX7_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZAX7_DICPU) HSP 1 Score: 137 bits (346), Expect = 7.750e-35 Identity = 80/150 (53.33%), Postives = 104/150 (69.33%), Query Frame = 1
Query: 1 NAYSSRSHAIFTVTFRQQ---RGGGAASGPVSRLNLVDLAGSERVGNTGAAGLRLREAGSINRSLAALSDVIKPPLTPSAGXXXXXXXXAFVPYRNSALTRLLRESLGGNARTVVLACVSPAAAHFEETLSTLKYAERAKAVRTHARVNE 441
NA SSRSHA+FT+ F Q R G A VS+++LVDLAGSER +TGA G+RL+E +IN+SL+ L VI S G FVPYR+S LT LL+ESLGGN++T+++A +SPA +FEETLSTL+YA+ AK ++T A VNE
Sbjct: 220 NATSSRSHAVFTIVFTQSKIDRSRGTAIDRVSKISLVDLAGSERANSTGATGVRLKEGANINKSLSTLGKVISALAENSTGKKA-----VFVPYRDSVLTYLLKESLGGNSKTIMIAAISPADINFEETLSTLRYADSAKKIKTVAVVNE 364
BLAST of jgi.p|Trimin1|150070 vs. uniprot
Match: A0A7R9Y2T7_9VIRI (Hypothetical protein (Fragment) n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9Y2T7_9VIRI) HSP 1 Score: 130 bits (328), Expect = 1.380e-34 Identity = 84/163 (51.53%), Postives = 103/163 (63.19%), Query Frame = 1
Query: 1 NAYSSRSHAIFTVTFRQ---QRGGGAASGP---------VSRLNLVDLAGSERVGNTGAAGLRLREAGSINRSLAALSDVI----KPPLTPSAGXXXXXXXXAFVPYRNSALTRLLRESLGGNARTVVLACVSPAAAHFEETLSTLKYAERAKAVRTHARVNE 441
N SSRSHA+FT+T R+ + G G+ GP V+R +LVDLAGSER +GA G +LRE+ INRSL L+DVI + P S FVPYRNS LT LL+ESLGGNA+TV++A VSP AAH ET+STL+YA RAK +R VNE
Sbjct: 57 NDRSSRSHAVFTITLRRSVLETGAGSVLGPNGRPFEAERVARCSLVDLAGSERQDRSGATGAKLRESSMINRSLTLLNDVIVHLSRDPNKDSR----------FVPYRNSVLTWLLKESLGGNAKTVMVATVSPCAAHVRETVSTLRYAARAKGIRNSPEVNE 209
BLAST of jgi.p|Trimin1|150070 vs. uniprot
Match: A0A2S2N502_9ZZZZ (Kinesin-like protein KIF1C (Fragment) n=1 Tax=bird metagenome TaxID=1833763 RepID=A0A2S2N502_9ZZZZ) HSP 1 Score: 127 bits (318), Expect = 1.770e-34 Identity = 73/150 (48.67%), Postives = 99/150 (66.00%), Query Frame = 1
Query: 1 NAYSSRSHAIFTVTFRQQRG---GGAASGPVSRLNLVDLAGSERVGNTGAAGLRLREAGSINRSLAALSDVIKPPLTPSAGXXXXXXXXAFVPYRNSALTRLLRESLGGNARTVVLACVSPAAAHFEETLSTLKYAERAKAVRTHARVNE 441
N SSRSHA+FT+ F Q+R + VSR++LVDLAGSER +GA G+RL+E +IN+SL L VI + F+PYR+S LT LL+E+LGGN+RT ++A +SPA + +EETLSTL+YA+R K +R HA +NE
Sbjct: 16 NETSSRSHAVFTIVFSQRRQDPLSDLTTEKVSRISLVDLAGSERADASGAKGIRLKEGANINKSLTTLGKVIS---ALAEAQSSKKKKADFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADSSYEETLSTLRYADRTKQIRCHAVINE 162
BLAST of jgi.p|Trimin1|150070 vs. uniprot
Match: UPI00065B81A1 (kinesin-like protein KIF13A n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI00065B81A1) HSP 1 Score: 129 bits (324), Expect = 2.550e-34 Identity = 77/150 (51.33%), Postives = 101/150 (67.33%), Query Frame = 1
Query: 1 NAYSSRSHAIFTVTFRQ---QRGGGAASGPVSRLNLVDLAGSERVGNTGAAGLRLREAGSINRSLAALSDVIKPPLTPSAGXXXXXXXXAFVPYRNSALTRLLRESLGGNARTVVLACVSPAAAHFEETLSTLKYAERAKAVRTHARVNE 441
N+ SSRSHA+F + Q + G + VS+L+LVDLAGSER TGA G RL+E +IN+SL L VI SAG FVPYR+S LT LL+++LGGN++TV++A +SPAA ++EETLSTL+YA+RAK + HA VNE
Sbjct: 2 NSESSRSHAVFNIVLTQTLTDQASGVSGEKVSKLSLVDLAGSERAQKTGAMGERLKEGSNINKSLTTLGLVISALADQSAGGKNKAK---FVPYRDSVLTWLLKDNLGGNSKTVMVATISPAADNYEETLSTLRYADRAKRIINHAVVNE 148
BLAST of jgi.p|Trimin1|150070 vs. uniprot
Match: A0A0K9PRQ6_ZOSMR (Chromosome-associated kinesin KIF4-like protein n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PRQ6_ZOSMR) HSP 1 Score: 135 bits (341), Expect = 3.530e-34 Identity = 79/152 (51.97%), Postives = 103/152 (67.76%), Query Frame = 1
Query: 1 NAYSSRSHAIFTVTFRQQRGGGAASGPV------SRLNLVDLAGSERVGNTGAAGLRLREAGSINRSLAALSDVIKPPLTPSAGXXXXXXXXAFVPYRNSALTRLLRESLGGNARTVVLACVSPAAAHFEETLSTLKYAERAKAVRTHARVN 438
N+ SSRSHAIFT+T Q+R GAA G + S+L+LVDLAGSER TGA GLRL+E INR L +L +VI + G VPYR+S LTRLL++SLGGN++T+++ACVSPA + EET++TLKYA RA+ ++ A VN
Sbjct: 202 NSQSSRSHAIFTITMEQKRNSGAAKGDICNDILCSKLHLVDLAGSERAKRTGADGLRLKEGIHINRGLLSLGNVIS-----ALGDEKKRKEGGHVPYRDSKLTRLLQDSLGGNSKTIMIACVSPADTNAEETINTLKYANRARNIQNKAVVN 348 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|150070 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_18455 ID=mRNA_18455|Name=jgi.p|Trimin1|150070|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=441bp|location=Sequence derived from alignment at Contig_260:51200..53885- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. AACGCCTACAGCTCTCGCAGCCACGCCATCTTCACAGTGACGTTCCGGCAback to top protein sequence of jgi.p|Trimin1|150070 >Trimin1|150070|gw1.260.4.1 ID=Trimin1|150070|gw1.260.4.1|Name=jgi.p|Trimin1|150070|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=147bp NAYSSRSHAIFTVTFRQQRGGGAASGPVSRLNLVDLAGSERVGNTGAAGLback to top mRNA from alignment at Contig_260:51200..53885- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_18455 ID=mRNA_18455|Name=jgi.p|Trimin1|150070|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2686bp|location=Sequence derived from alignment at Contig_260:51200..53885- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_260:51200..53885- >mRNA_18455 ID=mRNA_18455|Name=jgi.p|Trimin1|150070|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=441bp|location=Sequence derived from alignment at Contig_260:51200..53885- (Tribonema minus UTEX_B_3156 )back to top |