mRNA_1845 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|163570 vs. uniprot
Match: A0A835Z671_9STRA (Histidine kinase-like ATPase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z671_9STRA) HSP 1 Score: 471 bits (1211), Expect = 8.830e-168 Identity = 236/236 (100.00%), Postives = 236/236 (100.00%), Query Frame = 1 Query: 1 MAVLDGARANSMLSYVNHEVRNPLNVIKGMVEYTLLTLEQCALPPELGTCVADLTVASRACDFLEHIVSDILVLQRLEAGALVLNLHPHRVSDIVEDMREAVRHKMEEKKNVVLIIECPTDITAVVDAFGLKQILLNFLSNSMKYTDQGSITVRVTKHDSGEITIGVLDTGSGIPETHQKLIFQAHVQLDADDIGRHGSHGLGLYLVSMLAQRMNWTVGFHSTVGVGSHFWITIPA 708 MAVLDGARANSMLSYVNHEVRNPLNVIKGMVEYTLLTLEQCALPPELGTCVADLTVASRACDFLEHIVSDILVLQRLEAGALVLNLHPHRVSDIVEDMREAVRHKMEEKKNVVLIIECPTDITAVVDAFGLKQILLNFLSNSMKYTDQGSITVRVTKHDSGEITIGVLDTGSGIPETHQKLIFQAHVQLDADDIGRHGSHGLGLYLVSMLAQRMNWTVGFHSTVGVGSHFWITIPA Sbjct: 1 MAVLDGARANSMLSYVNHEVRNPLNVIKGMVEYTLLTLEQCALPPELGTCVADLTVASRACDFLEHIVSDILVLQRLEAGALVLNLHPHRVSDIVEDMREAVRHKMEEKKNVVLIIECPTDITAVVDAFGLKQILLNFLSNSMKYTDQGSITVRVTKHDSGEITIGVLDTGSGIPETHQKLIFQAHVQLDADDIGRHGSHGLGLYLVSMLAQRMNWTVGFHSTVGVGSHFWITIPA 236
BLAST of jgi.p|Trimin1|163570 vs. uniprot
Match: A0A836CM12_9STRA (Histidine kinase-like ATPase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM12_9STRA) HSP 1 Score: 311 bits (796), Expect = 6.540e-105 Identity = 149/209 (71.29%), Postives = 178/209 (85.17%), Query Frame = 1 Query: 28 NSMLSYVNHEVRNPLNVIKGMVEYTLLTLEQCALPPELGTCVADLTVASRACDFLEHIVSDILVLQRLEAGALVLNLHPHRVSDIVEDMREAVRHKMEEKKNVVLIIECPTDITAVVDAFGLKQILLNFLSNSMKYTDQGSITVRVTKHDSGEITIGVLDTGSGIPETHQKLIFQAHVQLDADDIGRHGSHGLGLYLVSMLAQRMNWTV 654 N MLSYVNH+VRNPLNVIKGMV+ T+LTL QC LPPEL TC+ DLT+ASRACDFLEHIVS ILV+QR EAGAL+LNL P+R+SDIV DM+ A+ HKMEE K V L+++CP DIT VVD F LKQ+LLN LSN+MKYT G+IT+ V +H+ GE+TIGV DTG+GIP++ +KLIF+AHVQL+A+D+GRHG HGLGLYLVSMLA M WTV Sbjct: 1 NQMLSYVNHKVRNPLNVIKGMVDLTVLTLTQCQLPPELSTCIWDLTIASRACDFLEHIVSGILVIQRWEAGALMLNLRPYRISDIVADMQNAIVHKMEENKMVALVVDCPADITVVVDEFRLKQMLLNLLSNAMKYTAAGTITIEVKRHEGGEVTIGVRDTGAGIPDSQKKLIFRAHVQLNANDVGRHGYHGLGLYLVSMLADCMGWTV 209
BLAST of jgi.p|Trimin1|163570 vs. uniprot
Match: A0A6N1NHF0_9VIRU (Histidine kinase n=1 Tax=Tupanvirus deep ocean TaxID=2126984 RepID=A0A6N1NHF0_9VIRU) HSP 1 Score: 184 bits (466), Expect = 1.310e-50 Identity = 99/236 (41.95%), Postives = 144/236 (61.02%), Query Frame = 1 Query: 25 ANSMLSYVNHEVRNPLNVIKGMVEYTLLTLEQ---------CALPPELGTCVADLTVASRACDFLEHIVSDILVLQRLEAGALVLNLHPHRVSDIVEDMREAVRHKMEEKKNVVLIIECPTDITAVVDAFGLKQILLNFLSNSMKYTDQGSITVRVTKHDSGEITIGVLDTGSGIPETHQKLIFQAHVQLDADDIGRHGSHGLGLYLVSMLAQRMNWTVGFHSTVGVGSHFWITIP 705 A ML YVNHE+RNPLNVIKG+VE+TL + + C T V+DL+ S +C+ LEHIV+DIL + +L++G L L+ ++ V D+ + + K++EK+ + L + D+ D + +KQILLNFL+N++KYT +GSIT+++ + + G V DTG GI + + IFQ Q + +D R+G GLGLYL ML +RM +GF ST GVGS FW+ P Sbjct: 396 ATQMLGYVNHEIRNPLNVIKGLVEFTLHNMNKLDENKLDRICMDKMFYDTIVSDLSTVSGSCNMLEHIVTDILDINKLDSGKLELDNKWVKIRSFVNDISKTISQKIDEKQTIKLDVVYEHDLVLYFDIYRMKQILLNFLTNAVKYTLKGSITIKIEELN-GNYRFSVTDTGRGIKDEAKFRIFQPFNQTNPEDASRYGGIGLGLYLCKMLTERMGGKIGFESTYGVGSTFWVDFP 630
BLAST of jgi.p|Trimin1|163570 vs. uniprot
Match: A0A6N1NZN1_9VIRU (Histidine kinase n=1 Tax=Tupanvirus soda lake TaxID=2126985 RepID=A0A6N1NZN1_9VIRU) HSP 1 Score: 176 bits (446), Expect = 9.430e-48 Identity = 95/236 (40.25%), Postives = 141/236 (59.75%), Query Frame = 1 Query: 25 ANSMLSYVNHEVRNPLNVIKGMVEYTLLTLEQ---------CALPPELGTCVADLTVASRACDFLEHIVSDILVLQRLEAGALVLNLHPHRVSDIVEDMREAVRHKMEEKKNVVLIIECPTDITAVVDAFGLKQILLNFLSNSMKYTDQGSITVRVTKHDSGEITIGVLDTGSGIPETHQKLIFQAHVQLDADDIGRHGSHGLGLYLVSMLAQRMNWTVGFHSTVGVGSHFWITIP 705 A ML YVNHE+RNPLNVIKG+VE+TL + + C T V+DL+ S +C+ LEHIV+DIL + +L++G L L+ ++ + D+ + + K++EK+ + L + D+ D + +KQILLNFL+N++KYT +G I +++ + + G V DTG GI + + IFQ Q + +D R+G GLGLYL ML +RM +GF ST VGS FW+ P Sbjct: 396 ATQMLGYVNHEIRNPLNVIKGLVEFTLHNISKLDQNKVDRICMDKMFYDTIVSDLSTVSGSCNMLEHIVTDILDINKLDSGKLELDNKWVKIRTFMNDISKTISQKIDEKQTIKLEVIYEYDLVLYFDIYRMKQILLNFLTNAVKYTIKGKIIIKIEELN-GNYRFSVTDTGRGIKDDAKSRIFQPFNQTNPEDSSRYGGIGLGLYLCKMLTERMGGKIGFESTFEVGSTFWVDFP 630
BLAST of jgi.p|Trimin1|163570 vs. uniprot
Match: A0A3G4ZXL8_9VIRU (Histidine kinase n=1 Tax=Edafosvirus sp. TaxID=2487765 RepID=A0A3G4ZXL8_9VIRU) HSP 1 Score: 158 bits (399), Expect = 3.930e-41 Identity = 93/241 (38.59%), Postives = 136/241 (56.43%), Query Frame = 1 Query: 25 ANSMLSYVNHEVRNPLNVIKGMVEYTLLTLEQCA-----------LPPELGTCVADLTVASRACDFLEHIVSDILVLQRLEAGALVLNLHPHRVSDIVEDMREAVRHKMEEKKNVVLIIECPTDI---TAVVDAFGLKQILLNFLSNSMKYTDQGSITVRVTKHDSGEITIGVLDTGSGIPETHQKLIFQAHVQLDADDIGRHGSHGLGLYLVSMLAQRMNWTVGFHSTVGVGSHFWITIP 705 AN ML YVNHE+RNPLNVI GMV+ T+ TL EL + ++DL A +C+ L HIV+D+L +++LE LV++ + + + + + K+ EK +V +E ++ +D L QILLN + NS+K+T G+I +++ K++S I V DTG GIP+ + IFQ Q D +D R+G GLGLYL +ML M T+ F S G+GS FWI +P Sbjct: 378 ANKMLGYVNHEIRNPLNVINGMVDITIETLNNKIEKNTGGTNVQIQKDELSSVISDLYTAEGSCNMLRHIVNDVLDIRKLEDDKLVIDNEYINLDLFCKSIHKTIIPKLREKIDVSFSMEFKDNLENENIYIDKNRLSQILLNLIFNSIKFTIVGNIILKIRKNNSN-IIFEVNDTGRGIPDEAKSYIFQPFHQADKEDSSRYGGIGLGLYLCNMLVNCMGGTINFESKFGIGSSFWIEVP 617
BLAST of jgi.p|Trimin1|163570 vs. uniprot
Match: UPI001559572C (response regulator n=1 Tax=Bowmanella denitrificans TaxID=366582 RepID=UPI001559572C) HSP 1 Score: 133 bits (335), Expect = 5.080e-32 Identity = 77/231 (33.33%), Postives = 132/231 (57.14%), Query Frame = 1 Query: 19 ARANSMLSYVNHEVRNPLNVIKGMVEYTLLTLEQCALPPELGTCVADLTVASRACDFLEHIVSDILVLQRLEAGALVLNLHPHRVSDIVEDMREAVRHKMEEKKNVVLIIECPTDI--TAVVDAFGLKQILLNFLSNSMKYTDQGSITVRVTKHDSGEITIGVLDTGSGIPETHQKLIFQAHVQLDADDIGRHGSHGLGLYLVSMLAQRMNWTVGFHSTVGVGSHFWITIP 705 A ++ L+ ++HE+R P+N + GM++ + Q +L + ++ AS++ L +++D+L ++EAG + ++LHP + ++ ++ V + K +V L+ + T++ + +VD+ LKQ+L+N +SN++K+T G++TV V + +GEI GV DTG GI E QK IFQ+ Q D R G GLGL + L M + F S G GSHFW ++P Sbjct: 755 AAKSNFLANMSHEIRTPMNAVIGMLQL----INQTSLTDKQQDYLSKAQSASKS---LLQLLNDVLDYSKIEAGKIDIDLHPADLESLIRELT-VVFSGSQMKNSVELLYDIDTNLPKSVLVDSLRLKQVLINLVSNALKFTMAGTVTVVVKRQSNGEIQFGVKDTGIGITEAQQKKIFQSFSQADPSTARRFGGSGLGLVISRRLTNLMGGELQFTSEEGEGSHFWFSLP 977
BLAST of jgi.p|Trimin1|163570 vs. uniprot
Match: A0A349TZ44_9PROT (Histidine kinase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A349TZ44_9PROT) HSP 1 Score: 132 bits (331), Expect = 1.390e-31 Identity = 80/230 (34.78%), Postives = 128/230 (55.65%), Query Frame = 1 Query: 37 LSYVNHEVRNPLNVIKGMVEYTLLTLEQCALPPELGTCVADLTVASRACDFLEHIVSDILVLQRLEAGALVLNLHPHRVSDIVEDMREAVRHKMEEKKNVVLIIECPTDITAVV--DAFGLKQILLNFLSNSMKYTDQGSITVRVTKHDSGE------ITIGVLDTGSGIPETHQKLIFQAHVQLDADDIGRHGSHGLGLYLVSMLAQRMNWTVGFHSTVGVGSHFWITI 702 L+ ++HE+R PLN I G+V L T P +L + D L IV+DIL + +++AG + L + P + + + ++ + EKK + + ++C I ++V DA ++QILLNFLSN++K+T++GS+ + + + +SG + V DTG GIPE HQK +F + Q DA G++G GLGL + L M+ +G ST G+GS FWI + Sbjct: 227 LAMMSHEIRTPLNGILGIVAMLLDT-------PSTPEQKENLETIKYSGDALLTIVNDILDISKIDAGKMELEIAPFSPEKLAGSIAQLMQSRAREKK-IEISVQCAPGIPSIVKGDASRIRQILLNFLSNAIKFTEEGSVGIFMDRLESGSTHKNARLRFAVRDTGIGIPEAHQKKLFSEYNQADASISGKYGGTGLGLAISKKLVMAMDGEIGLDSTPGMGSTFWIIV 448
BLAST of jgi.p|Trimin1|163570 vs. uniprot
Match: A0A257PRE8_9PROT (Histidine kinase (Fragment) n=1 Tax=Rhodospirillales bacterium 20-64-7 TaxID=1970566 RepID=A0A257PRE8_9PROT) HSP 1 Score: 129 bits (323), Expect = 5.290e-31 Identity = 85/239 (35.56%), Postives = 124/239 (51.88%), Query Frame = 1 Query: 4 AVLDGARANSMLSYVNHEVRNPLNVIKGMVEYTLLTLEQCALPPELGTCVADLTVASRACDFLEHIVSDILVLQRLEAGALVLNLHPHRVSDIVEDMREAVRHKMEEKKNVVLIIECPTDITAVV--DAFGLKQILLNFLSNSMKYTDQGSITVRVTKHDSGEITIGV----LDTGSGIPETHQKLIFQAHVQLDADDIGRHGSHGLGLYLVSMLAQRMNWTVGFHSTVGVGSHFWITI 702 A A + L+ ++HE+R PLN + GM+E +T L P L V A+++ L +V DIL L R+EAG L L P + I+ D+R + K++ L+ D+ VV D L+QIL N + N++K+T +G++TVR + E TI V DTG G+P Q +IF A Q D+ R+G GLGL + L M+ +G STVG+GS FW T+ Sbjct: 93 AETSNAAKSQFLANMSHEIRTPLNGVVGMIELMQMT----ELTPSLQRHVE---TAAQSSQSLLRLVDDILDLSRIEAGRLQLVAVPFHLPSILHDVRLLFTEQAR-TKSLTLLTAITQDMNTVVAGDKHRLQQILTNLVGNAIKFTPEGTVTVRCSGQPEDEKTIRVRFEVTDTGIGVPAERQAVIFDAFAQADSSMTRRYGGTGLGLSIARQLVHMMDGDIGVQSTVGIGSTFWFTV 323
BLAST of jgi.p|Trimin1|163570 vs. uniprot
Match: A0A1S7LGA7_MAGMO (Histidine kinase n=1 Tax=Magnetococcus massalia (strain MO-1) TaxID=451514 RepID=A0A1S7LGA7_MAGMO) HSP 1 Score: 129 bits (324), Expect = 1.410e-30 Identity = 81/234 (34.62%), Postives = 131/234 (55.98%), Query Frame = 1 Query: 28 NSMLSYVNHEVRNPLNVIKGMVEY---TLLTLEQCALPPELGTCVADLTVASRACDFLEHIVSDILVLQRLEAGALVLNLHPHRVSDIVEDMREAVRHKMEEKK-NVVLIIECPTDITAVVDAFGLKQILLNFLSNSMKYTDQGSITVRVT-KHDSGE---ITIGVLDTGSGIPETHQKLIFQAHVQLDADDIGRHGSHGLGLYLVSMLAQRMNWTVGFHSTVGVGSHFWITIP 705 + L+ ++HE+R P+N I GM E T LT++Q L V + + L I++DIL + R+EAG LV++ P + IV+D E +R + +EK N ++ ++ + DA ++QIL+NFL N++K+T+ G+I VT +HD + +T V+DTG G+P+++Q+ IF A Q+D+ RHG GLGL + L M+ + S G+GS F +P Sbjct: 411 SEFLATMSHEIRTPMNAILGMTELLGETELTVDQRNY----------LAVCRSSGENLLQIINDILDISRVEAGRLVVHAKPFNLRRIVKDAGEVIRFRSQEKGLNQLVSVDSNVPQWFIGDAARIRQILINFLGNAVKFTESGTIATLVTCEHDKADRYAVTFRVVDTGVGVPKSYQEHIFNAFQQVDSSSHRRHGGTGLGLAICQKLVDLMDGYISLKSDEGIGSAFSFVLP 634
BLAST of jgi.p|Trimin1|163570 vs. uniprot
Match: A0A271JCF5_9BACT (Uncharacterized protein n=2 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A271JCF5_9BACT) HSP 1 Score: 129 bits (323), Expect = 1.830e-30 Identity = 86/238 (36.13%), Postives = 132/238 (55.46%), Query Frame = 1 Query: 10 LDGARANS-MLSYVNHEVRNPLNVIKGMVEYTLLTLEQCALPPELGTCVADLTVASRACDFLEHIVSDILVLQRLEAGALVLNLHPHRVSDIVEDMREAVRHKMEEKKNVVLIIECPTDITAVVDAFG--LKQILLNFLSNSMKYTDQGSITVRV---TKHDSGEITIGVLDTGSGIPETHQKLIFQAHVQLDADDIGRHGSHGLGLYLVSMLAQRMNWTVGFHSTVGVGSHFWITIP 705 L ARA S L+ ++HE+R PLN + GM + T AL + V + + RA L +++D+L ++EAG L L P + + +D AV + +K V ++ D+ AVV A G L+Q++LN LSN++K+T+ G +T+R+ T+ ++TI V DTG GIPE +Q L+F++ Q+DA R G GLGL + L ++M V S VG GS F +T+P Sbjct: 179 LAAARAKSEFLAAMSHEIRTPLNGVIGMTDVLATT----ALSSDQRDYVHTIQASGRA---LLGVINDVLDFSKIEAGRLDLEAEPVALRALADDA-VAVVAQAATQKGVEVVCHVEPDVPAVVLADGARLRQVVLNLLSNAVKFTEAGGVTLRLDARTRRGLTDLTIRVSDTGIGIPEAYQPLLFESFTQVDASTTRRFGGTGLGLAISKRLVEQMGGAVQVESAVGAGSAFTVTVP 408 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163570 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1845 ID=mRNA_1845|Name=jgi.p|Trimin1|163570|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=711bp|location=Sequence derived from alignment at Contig_26:293100..293810+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCAGTGCTGGATGGAGCGCGTGCAAACTCTATGCTTTCGTATGTAAAback to top protein sequence of jgi.p|Trimin1|163570 >Trimin1|163570|e_gw1.26.9.1 ID=Trimin1|163570|e_gw1.26.9.1|Name=jgi.p|Trimin1|163570|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=237bp MAVLDGARANSMLSYVNHEVRNPLNVIKGMVEYTLLTLEQCALPPELGTCback to top mRNA from alignment at Contig_26:293100..293810+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1845 ID=mRNA_1845|Name=jgi.p|Trimin1|163570|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=711bp|location=Sequence derived from alignment at Contig_26:293100..293810+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_26:293100..293810+ >mRNA_1845 ID=mRNA_1845|Name=jgi.p|Trimin1|163570|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=711bp|location=Sequence derived from alignment at Contig_26:293100..293810+ (Tribonema minus UTEX_B_3156 )back to top |