mRNA_18410 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|181195
Unique NamemRNA_18410
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|181195 vs. uniprot
Match: A0A835Z730_9STRA (EF-hand domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z730_9STRA)

HSP 1 Score: 380 bits (975), Expect = 1.250e-133
Identity = 181/181 (100.00%), Postives = 181/181 (100.00%), Query Frame = 1
Query:    1 WDIFKRHDTTHDGYISVDTYFDKVVFEPKSTVGQALFALIDTDDPDKIEFGEFVQQAVCTFACLSPAEMLRFAFMVYDKDKSGVMEVEQLHDFIWKLHNSDVSNNVQHAMQDLTLDELGRLPFDSFKLLNKQYPQVMYPLFRLQQNTMRFVMGPKWWASKLRRLEYERVHRCAILQVDVSP 543
            WDIFKRHDTTHDGYISVDTYFDKVVFEPKSTVGQALFALIDTDDPDKIEFGEFVQQAVCTFACLSPAEMLRFAFMVYDKDKSGVMEVEQLHDFIWKLHNSDVSNNVQHAMQDLTLDELGRLPFDSFKLLNKQYPQVMYPLFRLQQNTMRFVMGPKWWASKLRRLEYERVHRCAILQVDVSP
Sbjct:    1 WDIFKRHDTTHDGYISVDTYFDKVVFEPKSTVGQALFALIDTDDPDKIEFGEFVQQAVCTFACLSPAEMLRFAFMVYDKDKSGVMEVEQLHDFIWKLHNSDVSNNVQHAMQDLTLDELGRLPFDSFKLLNKQYPQVMYPLFRLQQNTMRFVMGPKWWASKLRRLEYERVHRCAILQVDVSP 181          
BLAST of jgi.p|Trimin1|181195 vs. uniprot
Match: A0A6H5J7N0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7N0_9PHAE)

HSP 1 Score: 204 bits (518), Expect = 3.140e-63
Identity = 91/171 (53.22%), Postives = 128/171 (74.85%), Query Frame = 1
Query:    1 WDIFKRHDTTHDGYISVDTYFDKVVFEPKSTVGQALFALIDTDDPDKIEFGEFVQQAVCTFACLSPAEMLRFAFMVYDKDKSGVMEVEQLHDFIWKLHNSDVSNNVQHAMQDLTLDELGRLPFDSFKLLNKQYPQVMYPLFRLQQNTMRFVMGPKWWASKLRRLEYERVHR 513
            W++FK+ D   +G IS   +F+ ++ E ++  G A+F L+D +D + +EFGEFVQ AVCTF C    +ML+F FMVYDKD+SG+ME+E+LH FI  LH+S+V+NN+Q AM  L LDE GRLPFDSFK++NK +PQV+YP+FRLQQ+T R ++G KWW +K+  L + R +R
Sbjct:   34 WEVFKQFDLKREGLISRQAFFEGIIQEERNEFGNAIFTLVDPEDEETLEFGEFVQ-AVCTFCCFCVTDMLKFCFMVYDKDRSGLMEIEELHHFIKVLHSSNVTNNIQGAMSHLQLDEHGRLPFDSFKIMNKNFPQVLYPVFRLQQSTQRAILGNKWWKNKVNELGFWRENR 203          
BLAST of jgi.p|Trimin1|181195 vs. uniprot
Match: D8LMG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMG3_ECTSI)

HSP 1 Score: 199 bits (505), Expect = 3.610e-62
Identity = 88/161 (54.66%), Postives = 122/161 (75.78%), Query Frame = 1
Query:    1 WDIFKRHDTTHDGYISVDTYFDKVVFEPKSTVGQALFALIDTDDPDKIEFGEFVQQAVCTFACLSPAEMLRFAFMVYDKDKSGVMEVEQLHDFIWKLHNSDVSNNVQHAMQDLTLDELGRLPFDSFKLLNKQYPQVMYPLFRLQQNTMRFVMGPKWWASKL 483
            W++FK+ D   +G IS   +F+ ++ E ++  G A+F L+D +D + +EFGEFVQ AVCTF C    +ML+F FMVYDKD+SG+ME+E+LH FI  LH+S+V+NN+Q AM  L LDE GRLPFDSFK++NK +PQV+YP+FRLQQ+T R ++G KWW  K+
Sbjct:   11 WEVFKQFDLKREGLISRQAFFEGIIQEERNEFGNAIFTLVDPEDEETLEFGEFVQ-AVCTFCCFCVTDMLKFCFMVYDKDRSGLMEMEELHHFIKVLHSSNVTNNIQGAMSHLQLDEHGRLPFDSFKIMNKNFPQVLYPVFRLQQSTQRAILGNKWWKKKM 170          
BLAST of jgi.p|Trimin1|181195 vs. uniprot
Match: A0A7S2D7S8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D7S8_9STRA)

HSP 1 Score: 144 bits (364), Expect = 3.150e-39
Identity = 65/168 (38.69%), Postives = 103/168 (61.31%), Query Frame = 1
Query:    1 WDIFKRHDTTHDGYISVDTYFDKVVFEPKSTVGQALFALIDTDDPDKIEFGEFVQQAVCTFACLSPAEMLRFAFMVYDKDKSGVMEVEQLHDFIWKLHNSDVSNNVQHAMQDLTLDELGRLPFDSFKLLNKQYPQVMYPLFRLQQNTMRFVMGPKWWASKLRRLEYER 504
            W++F++ D    G ++ + +F K+V E ++  G A+F LID +DPDK+EFGEF+Q  V T+ C    E+L+F F ++D++K+G ++ ++L  F+  LHN     NV+ A Q +     G+  F  F+ LNK +P V+YP FR+QQN M  +MG  WW  K   L  ++
Sbjct:   30 WNVFRKCDYDRIGIVATEDFFTKIVQEGRNMFGNAIFELIDAEDPDKLEFGEFLQ-GVVTYCCFDELEILQFCFFIFDREKNGYIDQDELKFFVDVLHNEQQVANVRTAFQSIKFQTDGKFDFPEFQKLNKDFPTVLYPAFRMQQNMMLNIMGEDWWRQKKLMLTLDK 196          
BLAST of jgi.p|Trimin1|181195 vs. uniprot
Match: A0A2R5GWK3_9STRA (Calmodulin-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GWK3_9STRA)

HSP 1 Score: 129 bits (325), Expect = 6.220e-33
Identity = 57/168 (33.93%), Postives = 107/168 (63.69%), Query Frame = 1
Query:    1 WDIFKRHDTTHDGYISVDTYFDKVVFEPKSTVGQALFALIDTDDPDKIEFGEFVQQAVCTFACLSPAEMLRFAFMVYDKDKSGVMEVEQLHDFIWKLHNSDVSNNVQHAMQDLTLDELGRLPFDSFKLLNKQYPQVMYPLFRLQQNTMRFVMGPKWWASKLRRLEYER 504
            W IF+++D  H G I V+ ++ +++ E ++  G +LF L+D D    ++F EFVQ  + T+A  +  ++L+F F V+DKDK+G ++ ++LH  +  LH ++ ++N + A+ +   +  G++ F+ F+ +N ++PQ+++P FR+QQN M   +G +WW  K   L+ ER
Sbjct:   30 WRIFQKYDRDHGGTIDVEEFY-RLIEEERTVFGDSLFELVDIDCSGTLDFSEFVQ-TIATYALFARVDILKFCFFVFDKDKNGYIDSDELHALVEMLHGNNPTSNCRTALANFDTNSDGKIDFEEFQAMNVRFPQLLHPAFRMQQNMMINTLGEQWWNGKKLMLQEER 195          
BLAST of jgi.p|Trimin1|181195 vs. uniprot
Match: A0A7S1UH45_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UH45_9STRA)

HSP 1 Score: 120 bits (301), Expect = 2.750e-30
Identity = 62/171 (36.26%), Postives = 98/171 (57.31%), Query Frame = 1
Query:    1 WDIFKRHDTTHDGYISVDTYFDKVVF--EPKSTVGQALFALIDTDDPDKIEFGEFVQQAVC-TFACLSPAEMLRFAFMVYDKDKSGVMEVEQLHDFIWKLHNSDVSNNVQHAMQDLTLDELGRLPFDSFKLLNKQYPQVMYPLFRLQQNTMRFVMGPKWWASKLRRLEYER 504
            WD F+ +D    G IS   +F  +    E ++  G A+  L D  D   ++FG+F Q  +C TF      EML+F F V+DKDK+G M+ ++L+ F+  ++ + V +N+   ++ L  DE GRL +  F  +++Q+P V+YP+F+ Q N    VMG KWW  +L RL  +R
Sbjct:   34 WDAFRAYDHNAVGSISKIDFFCNICDQREWETDFGNAILELCDVKDEGTLDFGQFTQ--ICGTFGAFQTKEMLQFCFFVFDKDKNGHMDEDELNAFVADIYGNAVPSNILSVIKGLNFDEDGRLYYPQFAAMHRQFPAVLYPVFQFQTNLRTNVMGAKWWNQRLARLRMDR 202          
BLAST of jgi.p|Trimin1|181195 vs. uniprot
Match: A0A8K1C2H3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2H3_PYTOL)

HSP 1 Score: 121 bits (304), Expect = 3.970e-30
Identity = 58/156 (37.18%), Postives = 94/156 (60.26%), Query Frame = 1
Query:   61 FDKVVFEPKSTVGQALFALIDTDDPDKIEFGEFVQQAVCTFACLSPAEMLRFAFMVYDKDKSGVMEVEQLHDFIWKLHNSDVSNNVQHAMQDLTLDELGRLPFDSFKLLNKQYPQVMYPLFRLQQNTMRFVMGPKWWASKLRRLEYERVHRCAILQ 528
            F K + E  S  G A+FALID D+  +++F E+V+ A+  F  LS  +ML+F F V+D DK+G +E  +L   +  LH    ++N++ A +    ++ G++ F  F++LN Q+P ++YP FR+QQN   + MG  WW  K+  L +E+  + A LQ
Sbjct:   53 FYKSIDEKDSEFGDAIFALIDEDNSGQLDFSEYVE-ALGKFCVLSKEDMLKFCFNVFDADKNGTIEGPELTHLMEMLHADGQTSNMKQAFKSFDFNDDGKIDFQEFQMLNAQFPSLLYPAFRIQQNMRIYTMGVSWWRKKIEELHHEKAEQLAKLQ 207          
BLAST of jgi.p|Trimin1|181195 vs. uniprot
Match: A0A1V9YZW5_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YZW5_9STRA)

HSP 1 Score: 118 bits (296), Expect = 7.620e-29
Identity = 59/163 (36.20%), Postives = 99/163 (60.74%), Query Frame = 1
Query:    7 IFKRHDTTHDGYISVDTYFDKVVFEPKSTVGQALFALIDTDDPDKIEFGEFVQQAVCTFACLSPAEMLRFAFMVYDKDKSGVMEVEQLHDFIWKLHNSDVSNNVQHAMQDLTLDELGRLPFDSFKLLNKQYPQVMYPLFRLQQNTMRFVMGPKWWASKLRRLE 495
             FK   T+  G I+ D +F +   E ++ VG A+FALID D   +++F E+V+ A+  F  L+P E+L+F F V+D+DK+G +E  +L   +  LH    ++N++ A+        G+L F  F+LL++Q+P ++YP+FRLQ+N   + MG  WW  ++  L+
Sbjct:   54 FFKIQLTSGSGTINRDEFF-RSCHEERTAVGDAVFALIDIDGSGELDFSEYVE-ALGAFCLLNPEEILKFCFFVFDQDKNGTIENAELDSLLEILHAEGGTSNMKEALASFHFHADGKLDFAEFELLHQQFPTLLYPVFRLQENLKLYTMGSSWWRKRVELLQ 214          
BLAST of jgi.p|Trimin1|181195 vs. uniprot
Match: A0A6A3K789_9STRA (Uncharacterized protein n=2 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3K789_9STRA)

HSP 1 Score: 117 bits (292), Expect = 2.780e-28
Identity = 57/147 (38.78%), Postives = 89/147 (60.54%), Query Frame = 1
Query:   79 EPKSTVGQALFALIDTDDPDKIEFGEFVQQAVCTFACLSPAEMLRFAFMVYDKDKSGVMEVEQLHDFIWKLHNSDVSNNVQHAMQDLTLDELGRLPFDSFKLLNKQYPQVMYPLFRLQQNTMRFVMGPKWWASKLRRLEYERVHRCA 519
            E  S  G A+FALID D+   ++F E+V+ A+  F  L+  +ML+F F V+D DK+G +E E+L   +  LH  + ++N++HA++    +  G++ F  FK LN Q+P ++YP FR+QQN   F +G KWW  K+  L  E   + A
Sbjct:   66 EKHSEFGDAIFALIDEDNSGVLDFSEYVE-ALGKFCLLNKEDMLKFCFNVFDDDKNGTIEGEELTHLLEILHADEQTSNMKHALKTFDFNGDGKIDFAEFKQLNTQFPSLLYPAFRIQQNMKIFTLGEKWWERKIEELVTEHHEKLA 211          
BLAST of jgi.p|Trimin1|181195 vs. uniprot
Match: W2J7J7_PHYPR (Uncharacterized protein n=10 Tax=Phytophthora TaxID=4783 RepID=W2J7J7_PHYPR)

HSP 1 Score: 116 bits (290), Expect = 5.440e-28
Identity = 55/146 (37.67%), Postives = 90/146 (61.64%), Query Frame = 1
Query:   55 TYFDKVVFEPKSTVGQALFALIDTDDPDKIEFGEFVQQAVCTFACLSPAEMLRFAFMVYDKDKSGVMEVEQLHDFIWKLHNSDVSNNVQHAMQDLTLDELGRLPFDSFKLLNKQYPQVMYPLFRLQQNTMRFVMGPKWWASKLRRL 492
            T F   + E  S  G A+FALID D+   ++F E+V+ A+  F  L+  +ML+F F V+D DK+G +E ++L + +  LH  + ++N++HA++    +  G++ F  FK L+ Q+P ++YP FR+QQN   F +G KWW  K+  L
Sbjct:   58 TEFYASIDEKHSPFGDAIFALIDEDNSGVLDFSEYVE-ALGKFCLLNKEDMLKFCFNVFDDDKNGTIEGQELTNLLEILHEDEQTSNMKHALKTFDFNGDGKIDFGEFKQLHSQFPSLLYPAFRIQQNMKIFTLGEKWWERKIEEL 202          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|181195 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z730_9STRA1.250e-133100.00EF-hand domain-containing protein (Fragment) n=1 T... [more]
A0A6H5J7N0_9PHAE3.140e-6353.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMG3_ECTSI3.610e-6254.66Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2D7S8_9STRA3.150e-3938.69Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A2R5GWK3_9STRA6.220e-3333.93Calmodulin-like protein n=1 Tax=Hondaea fermentalg... [more]
A0A7S1UH45_9STRA2.750e-3036.26Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A8K1C2H3_PYTOL3.970e-3037.18Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9YZW5_9STRA7.620e-2936.20Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A6A3K789_9STRA2.780e-2838.78Uncharacterized protein n=2 Tax=Phytophthora rubi ... [more]
W2J7J7_PHYPR5.440e-2837.67Uncharacterized protein n=10 Tax=Phytophthora TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_245contigContig_245:51888..54293 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|181195|e_gw1.245.21.1
BRITEko00000,ko00001,ko00002,ko01000,ko01009
KEGG rclassRC00002,RC00017
KEGG ReactionR01926,R02976
KEGG ModuleM00100
KEGG Pathwayko00600,ko01100,ko04010,ko04020,ko04022,ko04071,ko04072,ko04114,ko04218,ko04310,ko04360,ko04370,ko04371,ko04380,ko04650,ko04658,ko04659,ko04660,ko04662,ko04666,ko04720,ko04724,ko04921,ko04922,ko04924,ko05010,ko05014,ko05031,ko05152,ko05166,ko05167,map00600,map01100,map04010,map04020,map04022,map04071,map04072,map04114,map04218,map04310,map04360,map04370,map04371,map04380,map04650,map04658,map04659,map04660,map04662,map04666,map04720,map04724,map04921,map04922,map04924,map05010,map05014,map05031,map05152,map05166,map05167
KEGG koko:K04718,ko:K06268
EC2.7.1.91
Descriptioncalcium ion binding
COG categoryDTZ
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5126@1|root,KOG0034@2759|Eukaryota
Evalue5.91e-63
Seed ortholog2880.D8LMG3
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEF-hand domain pair
Ec32 orthologEc-05_002650.1
TranscriptId181517
TrackFilteredModels1
ProteinId181195
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|181195gene_18410Tribonema minus UTEX_B_3156 geneContig_245 51888..54293 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|181195Trimin1|181195|e_gw1.245.21.1Tribonema minus UTEX_B_3156 polypeptideContig_245 51888..54293 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18410_4exon_18410_4Tribonema minus UTEX_B_3156 exonContig_245 51888..52052 -
exon_18410_3exon_18410_3Tribonema minus UTEX_B_3156 exonContig_245 52786..52941 -
exon_18410_2exon_18410_2Tribonema minus UTEX_B_3156 exonContig_245 53339..53398 -
exon_18410_1exon_18410_1Tribonema minus UTEX_B_3156 exonContig_245 54129..54293 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18410CDS_18410Tribonema minus UTEX_B_3156 CDSContig_245 54129..54293 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18410 ID=mRNA_18410|Name=jgi.p|Trimin1|181195|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=546bp|location=Sequence derived from alignment at Contig_245:51888..54293- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TGGGACATCTTCAAGCGCCACGACACCACCCACGACGGCTACATCAGCGT
CGACACGTACTTTGACAAGGTGGTGTTTGAGCCCAAGAGCACCGTGGGTC
AGGCCCTCTTTGCGCTGATTGATACGGACGATCCCGACAAGATTGAGTTT
GGAGAGTTCGTACAGCAGGCGGTGTGCACCTTTGCCTGCCTGTCGCCAGC
AGAGATGCTGCGTTTTGCATTTATGGTTTACGACAAGGACAAGTCTGGCG
TGATGGAGGTCGAGCAGCTGCACGACTTCATCTGGAAGCTGCACAACAGC
GACGTGAGCAACAACGTGCAGCACGCCATGCAAGACCTCACGCTGGATGA
GCTGGGACGCCTGCCGTTTGACTCCTTCAAGCTGCTCAACAAGCAGTACC
CGCAAGTCATGTACCCCCTATTTCGGCTGCAGCAGAACACCATGCGCTTT
GTCATGGGGCCCAAGTGGTGGGCCTCCAAGCTGAGGCGCTTGGAGTACGA
GCGAGTGCACAGGTGCGCTATACTTCAAGTAGACGTTTCACCCTAG
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protein sequence of jgi.p|Trimin1|181195

>Trimin1|181195|e_gw1.245.21.1 ID=Trimin1|181195|e_gw1.245.21.1|Name=jgi.p|Trimin1|181195|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=182bp
WDIFKRHDTTHDGYISVDTYFDKVVFEPKSTVGQALFALIDTDDPDKIEF
GEFVQQAVCTFACLSPAEMLRFAFMVYDKDKSGVMEVEQLHDFIWKLHNS
DVSNNVQHAMQDLTLDELGRLPFDSFKLLNKQYPQVMYPLFRLQQNTMRF
VMGPKWWASKLRRLEYERVHRCAILQVDVSP*
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mRNA from alignment at Contig_245:51888..54293-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18410 ID=mRNA_18410|Name=jgi.p|Trimin1|181195|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2406bp|location=Sequence derived from alignment at Contig_245:51888..54293- (Tribonema minus UTEX_B_3156 )
TGGGACATCTTCAAGCGCCACGACACCACCCACGACGGCTACATCAGCGT CGACACGTACTTTGACAAGGTGGTGTTTGAGCCCAAGAGCACCGTGGGTC AGGCCCTCTTTGCGCTGATTGATACGGACGATCCCGACAAGATTGAGTTT GGAGAGTTCGTACAGGTGACGCTCACGCTGTGCTTCAACTTCAAGTCGAG GCCCTGACAGGAAGTGCTCACGAACAAAAATCGCGTAGACATTTTCATAT GGATGATTGTGGAGGCGCATGAAGCAAAACGCGGGGGAGGGGGGCGTGGA GGGGGGGGTTAGTCAGCATTCGGCAAGCTGCGTCTCTTGGGACGCAGTTC TGTAAAGGGAACACAACTCACAAAATCTCGTGGCTCAAGCAGTTACACTG ACAGCTGACGTGTCTGCCACAAGCACAAAGCAGTGACATGGAGTGTGCCT TGCAGTTGGGCAACCTGGAGAAGTTCTTTGGTCGTGGAGAGCGAGTACTG GTGTGAAGCGGGGCTACTTTCAATGAGTCTCTTTTTGGGCACAGAGCGCT GCATAAAGCGCATGCGCACTCCAATGTGAGTGGGCTTTTTTGTGCCCCTG AGCAGCAAAAAGAAAGATCCTCCAAGATACTTCAAGATGCCCCTTGTAGC GCTTGATCAGTTGTTACTTGGGGAGCGAAAAAGCCCCCTGAAGTACCTTT CAATGCTGTGCAGAAACATTGAGGAGTCATTGCATGTACCGCAGGTCTGC ATGTGGTTGGCTTCGTGGCACACTGCAGTCACAGTTGTCACACTTCGAGC TGCCTGAAGATTGTTCGACTTCGACCCTGACTTGAGCAACACTAATGAAG GCTGCCTGCCTGCTTGCTGCATGCTCCCGCTGTCATTTGAACAAGCAGGC GGTGTGCACCTTTGCCTGCCTGTCGCCAGCAGAGATGCTGCGTTTTGCAT TTATGGTGAGCGGCAATCCAAGGTCCATCGAGCACCCACTCTTGAAGAAG TCAATAGAGCACTGCATGCGTGCACATCATTGGGCCTTGCGCACTGTAGG AAGGCCGCTGTGGTGTTCGGTGCTGCAGGATGCGCTTGTACACCCACAAA CAGCAGTTTTAGCATAGAAGGTCAATGGGCTCATCATTTGCGCGTGTGCT TTTGTTGGGCATTGCAATGGCATGCCCCCCTTACAATAAGCCATTGACTT TATGTGTATGCCGGCATATCAGGAGCTTTTATGTGGAGGCGCTTGTGCAG CCAGACTTGAAGTGCAGGCAGCTGTATATTGGATTGCAGGCTTGAATCTG TGATCTTCACGTTTGCGCTCCGCTTGGCTGCGCGCTGCTGCTGCTGCTGC AGGTTTACGACAAGGACAAGTCTGGCGTGATGGAGGTCGAGCAGCTGCAC GACTTCATCTGGAAGCTGCACAACAGCGACGTGAGCAACAACGTGCAGCA CGCCATGCAAGACCTCACGCTGGATGAGCTGGGACGCCTGCCGTTTGACT CCTTCAAGGTGAGAGTGGCACTGGAAACTCATATTCACTGGGTTAGGGTT AGGGTTAAGGTTACGCGAACACTCGACCATTGATTCTCGCCAAAAAGCTT AACATTACAAATACAATGCATGCTCAAGATGCGCATGTTGTCACAAAATT CCGCCGCAATGGTACAGCTTGCGTGTGCTGTGTCCAGTCTTAGTTGACAT TCTGGTGCATGTGGGGAATCTGAGCCCGCAAGCGGTGCCTTCGTACCCTT TTCCAATTAATGAAAATATGTGCAAGTACAGAGTTTTGTCTTTGAGATGC TGGAGTCTTTGGGCTCACAGTATATCAACGTGGAATGCTCTTATTTCATA GTTGCTAGTGAGGATTCGGCCACCTATAGAACAGCTCTCTGTCTCGGTTT TTTATGTCCTCGAGGTTCTGTTATTGGGAGCCTGAAACTAGTCTTGTATG CGCCTGAATATGACCCGCGCAAAAAGCAAATTTCATAGATTTCAAAAAGG CATGCTGAGGGAAAGAGTCATACATACACATGGTACGCCCCGTGCACTTG CGCATGTTCTGAGCGCGCTACCATGCTACTGCTTCTGATGAAACCGACGC CATGCGCTGCTCGTGGTACGCCCACTCTTGGTGCACACGCACACCACAAA CTTACTCGGCCAGCACACATTTTTCTTAATTTTTCTGACTGAATTATCAT GATGCGGTGCTTGTGATGCAATGTGTTTTTTTGTGCTGCAGCTGCTCAAC AAGCAGTACCCGCAAGTCATGTACCCCCTATTTCGGCTGCAGCAGAACAC CATGCGCTTTGTCATGGGGCCCAAGTGGTGGGCCTCCAAGCTGAGGCGCT TGGAGTACGAGCGAGTGCACAGGTGCGCTATACTTCAAGTAGACGTTTCA CCCTAG
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Coding sequence (CDS) from alignment at Contig_245:51888..54293-

>mRNA_18410 ID=mRNA_18410|Name=jgi.p|Trimin1|181195|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=546bp|location=Sequence derived from alignment at Contig_245:51888..54293- (Tribonema minus UTEX_B_3156 )
TGGGACATCTTCAAGCGCCACGACACCACCCACGACGGCTACATCAGCGT
CGACACGTACTTTGACAAGGTGGTGTTTGAGCCCAAGAGCACCGTGGGTC
AGGCCCTCTTTGCGCTGATTGATACGGACGATCCCGACAAGATTGAGTTT
GGAGAGTTCGTACAGCAGGCGGTGTGCACCTTTGCCTGCCTGTCGCCAGC
AGAGATGCTGCGTTTTGCATTTATGGTTTACGACAAGGACAAGTCTGGCG
TGATGGAGGTCGAGCAGCTGCACGACTTCATCTGGAAGCTGCACAACAGC
GACGTGAGCAACAACGTGCAGCACGCCATGCAAGACCTCACGCTGGATGA
GCTGGGACGCCTGCCGTTTGACTCCTTCAAGCTGCTCAACAAGCAGTACC
CGCAAGTCATGTACCCCCTATTTCGGCTGCAGCAGAACACCATGCGCTTT
GTCATGGGGCCCAAGTGGTGGGCCTCCAAGCTGAGGCGCTTGGAGTACGA
GCGAGTGCACAGGTGCGCTATACTTCAAGTAGACGTTTCACCCTAG
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