mRNA_18393 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354439
Unique NamemRNA_18393
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Match: A0A835Z8Z5_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Z5_9STRA)

HSP 1 Score: 715 bits (1846), Expect = 5.030e-260
Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 1
Query:    1 MKKPKLQSAADAKTSPEITIESCRRERAASEVQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLEYRFLVLEYLELGTLADGIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSVLAQSLPLDVTRAPTAISLVSSDAQEVEVASPSHASSGRYSTGMLGQLRRRMSFAVTSKRSLQRQSAGLR 1095
            MKKPKLQSAADAKTSPEITIESCRRERAASEVQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLEYRFLVLEYLELGTLADGIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSVLAQSLPLDVTRAPTAISLVSSDAQEVEVASPSHASSGRYSTGMLGQLRRRMSFAVTSKRSLQRQSAGLR
Sbjct:    1 MKKPKLQSAADAKTSPEITIESCRRERAASEVQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLEYRFLVLEYLELGTLADGIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSVLAQSLPLDVTRAPTAISLVSSDAQEVEVASPSHASSGRYSTGMLGQLRRRMSFAVTSKRSLQRQSAGLR 365          
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Match: A0A835ZE86_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE86_9STRA)

HSP 1 Score: 315 bits (808), Expect = 6.640e-99
Identity = 158/294 (53.74%), Postives = 195/294 (66.33%), Query Frame = 1
Query:   88 SEVQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLE---------------------------YRFLVLEYLELGTLADGIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSV 888
            +++ W +L+NL Y+  GAMCRIYSA   G KV VK+ RDDC+DP  AEHDLE                           YRFLVLEYLE+GTLAD +  G   G +++   K++KG K+ +    V MLERA+E+AEA+EY+H+ +CGGA  V+HRDLKPDN+GF ADGTLKLFDFGLARC +R     ARY MTG TG++RYM PEV     YNEKVDVY+FGL+LWEMLQYRRVF G+SV +FY  V+ GG RP  D SW P L  L+  CW  D +KRP F  I A L+ +
Sbjct:  133 TKIVWEDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLDHRHIIKLLGAGLREIPPYRFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRRARVNARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDFHYIAAQLKDI 426          
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Match: A0A6H5L2R6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R6_9PHAE)

HSP 1 Score: 265 bits (677), Expect = 2.670e-79
Identity = 141/290 (48.62%), Postives = 180/290 (62.07%), Query Frame = 1
Query:   94 VQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLE---------------------------YRFLVLEYLELGTLADGIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLR 882
            +QW+EL  + Y+  GAMC IYSA L G KVAVKI R DC++P+ AEHDLE                           +RFLVLE+LELGTLAD ++    +    S  A+  K  K+      V MLER++E+A A+E++HY +      ++HRDLKPDNVGF ADGTLKLFDFGLAR  +R     ARY MTG TG++RYM PEV     YNEKVDVY+FGL+LWEML+ RRVF G+ V +FY  V+  G RP  D +W  +L  L+  CW  D ++RP F++I   LR
Sbjct:  203 LQWSELSKVTYMTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKPHRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYHMPD--MFIVHRDLKPDNVGFKADGTLKLFDFGLARVVKRRNRVNARYEMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLEDRRVFDGMGVTDFYERVVNAGARPNLDSAWPQDLRKLISQCWHADVDRRPNFRTIAERLR 490          
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Match: D7FS28_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS28_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 8.600e-78
Identity = 136/282 (48.23%), Postives = 175/282 (62.06%), Query Frame = 1
Query:  136 GAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLE---------------------------YRFLVLEYLELGTLADGIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSVLAQS 900
            GAMC IYSA L G KVAVKI R DC++P+ AEHDLE                           +RFLVLE+LELGTLAD ++    +    S  A+  K  K+      V MLER++E+A A+E++HY +      ++HRDLKPDNVGF ADGTLKLFDFGLAR  +R     ARY MTG TG++RYM PEV     YNEKVDVY+FGL+LWEML+ RRVF G+ V +FY  V+  G RP  D +W  +L  L+  CW  D ++RP F++I   LR++ + +
Sbjct:    4 GAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKPHRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYHMPD--MFIVHRDLKPDNVGFKADGTLKLFDFGLARVVKRRNRVNARYEMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLEDRRVFDGMGVTDFYERVVNAGARPNLDSAWPQDLRKLISQCWHADVDRRPNFRTIAERLRTLYSNA 283          
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Match: A0A835YNL8_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL8_9STRA)

HSP 1 Score: 216 bits (550), Expect = 8.820e-64
Identity = 129/320 (40.31%), Postives = 165/320 (51.56%), Query Frame = 1
Query:  142 MCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLEY-----------------------------RFLVLEYLELGTLADGIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRR---------------------------------------AENNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSVLAQ 897
            MCRIYSA   G KVAVK  RD+ +D + AE DLE                              RFLVLEYLE GTL D I  G     +   L +L+ G K+ +H   +  LERA ++A+A+EY+H    G AT VLHRD+K +N GF ADGTLKLFDFGLA C  R                                            ARY MTGNTGT RYM PEVAR + YN  VDVYSFG++LWEML   R F+  + +   + V+ G  RP  D +W   + +L++GCW+ D ++RP   ++   LR+VLA+
Sbjct:    1 MCRIYSAQWQGVKVAVKAPRDESRDCAGAERDLELELHLLQHLHHRHIIKLIGAGWHSVGRRLSRFLVLEYLEGGTLGDAIAQGAASRGRMPILKRLLGGHKKTRHQNVLQALERATQLADALEYLHCPGGGPATAVLHRDIKAENCGFTADGTLKLFDFGLAACAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGGCARYHMTGNTGTSRYMAPEVARCEPYNASVDVYSFGVLLWEMLSGGRAFANFNEQLLRSAVVYGSHRPELDRAWPAPIKSLLQGCWNADPDQRPDATAVARCLRAVLAE 320          
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Match: A0A6H5LAW2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW2_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 2.370e-56
Identity = 120/316 (37.97%), Postives = 164/316 (51.90%), Query Frame = 1
Query:   94 VQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLEY--------------------------------------------------RFLVLEYLELGTLADGIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARC-QRRAENNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSV 888
            + + EL++++Y+  G MC IY+A   GR+V VK+ RDDC  P  A  DLE                                                   RF++LEYL  GTL + + T          ++ +V+  ++N        ++ AL++A A+ Y+H     G+ VV HRDLKP+N+ F+ DG LKLFDFGLA+  +RR    + RY MTG TG+ RYM PEVA    YNEK DVYSFGL+LWEML  RR F G++ +EF   V+ GGRRP     WS  L  LM+ CW  D + RP F+ +  TL  +
Sbjct:   40 LDFEELRDVQYLTNGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQANAESKRFVLLEYLVGGTLTESMLT--RNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVV-HRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKADVYSFGLILWEMLSLRRPFEGLNRKEFVQSVIKGGRRPPLQQEWSAALRELMRRCWDEDMDTRPEFEEVEDTLLQI 352          
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Match: A0A7S2S189_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S189_9STRA)

HSP 1 Score: 201 bits (510), Expect = 9.010e-55
Identity = 114/298 (38.26%), Postives = 165/298 (55.37%), Query Frame = 1
Query:   91 EVQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLEY--------------------------RFLVLEYLELGTLAD--GIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTAR-YSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSVLAQ 897
            +++W+ L N+ Y+  G    I++A L    V VK  + +C+D + A +++E                           RF+VLE L+ G+L    G +T +    ++           + KH  +V +L+ A  +AEAMEY+H     G  +VLHRDLKPDN+GF  DGT+KL DFGLAR    +  +T   Y M+G TG++RYM PEVA GQ YN K DVYSFG++LWEML +++ F G+   +F+  V  GG RPT +  W  E   +MK CWS D   RP F+++VA L  +L +
Sbjct:  373 DLRWSNLSNVEYLTDGGNSWIHTAVLNRHPVVVKWLKPECQDLAVAINEIEAELDIHAQLQHSHIVSLCGAGLTSKGSRFMVLERLDGGSLTQVLGYDTRIRDRRRRFW---------KKKHFTYVEVLKCARSIAEAMEYLHSDAIPGC-MVLHRDLKPDNIGFTLDGTIKLIDFGLARVVENSSPDTDELYEMSGETGSLRYMAPEVADGQPYNHKADVYSFGIILWEMLAHKKPFDGMDKEQFFERVTYGGERPTINKKWPTEFTDIMKSCWSYDSESRPNFQTVVAKLNKILTK 660          
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Match: A0A7S2LC32_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LC32_9STRA)

HSP 1 Score: 193 bits (490), Expect = 9.100e-55
Identity = 108/296 (36.49%), Postives = 165/296 (55.74%), Query Frame = 1
Query:   94 VQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLE--------------------------YRFLVLEYLELGTLAD--GIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTAR-YSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSVLA 894
            ++WN LQN+ Y+  G    I++A + G+ V VK  + +C+D + A +++E                           RF+VLE L+ GTL    G +T +    ++           + K   ++ +L  A  +A+A+ Y H G     T+VLHRD+KPDN+GF  DGTLKL DFGLA+    A  +    YS++G TG++RYM PEVA  + YN K DVYSFG++LWEML Y++ + G++   FY  ++ GG RP  +  W  ELV+L+  CWS D  +RP F ++V  L ++++
Sbjct:   46 MKWNSLQNIEYLTDGGNSWIHTAVVNGKSVVVKTLKPECQDMAMAINEIEAELDVHARLSHENIVALVGAGLTSKGVRFVVLERLDGGTLTQVLGYDTRIRDRRRRFF---------KRKQLSYLEVLNHARSLADALGYCH-GKAVPGTLVLHRDVKPDNIGFTIDGTLKLIDFGLAKVVDNATPDCNDVYSLSGETGSLRYMAPEVADNRPYNHKADVYSFGIILWEMLAYKKPYDGLNRESFYVRIVDGGERPPVNKKWPKELVSLVTDCWSADIEQRPSFSAVVERLTNMIS 331          
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Match: A0A7S2E226_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E226_9STRA)

HSP 1 Score: 191 bits (486), Expect = 2.770e-51
Identity = 109/292 (37.33%), Postives = 171/292 (58.56%), Query Frame = 1
Query:   82 AASEVQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLEYRFLVLEYLE---------LGTLADGIETGVMQGHQQSTLAKLV----------KGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAE-NNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSVLAQ 897
            A+  ++W +L N+ Y+  G    I++A L GR V VK  + +C+D + A +++E    +   L+          GT + G+   V++     TL++++          +   R K   +V +L+ A  +A+A++Y H     GA + LHRDLKPDN+GFA DGT+K+ DFGLAR  + ++ N+   Y M+G TG++RYM PEVA+   YN+K DVYSFG++LWE+  Y++ + G++  EFY  V+ G  RP  +  W  ELV LM+ CWS D + RP F+ IV  L  +L++
Sbjct:  386 ASLNLKWGQLNNVEYLTDGGNNWIHTAVLNGRAVVVKTLKPECQDVALAINEIELELDIHSKLDHPFICGLVGAGTTSKGVRFIVLERLDGGTLSQMLGYDNRIRDRRRRFWRKKQFAYVEVLKFARCIADALDYCHRLAIPGA-MCLHRDLKPDNIGFAIDGTVKILDFGLARIVKYSDLNSNEVYQMSGQTGSLRYMAPEVAKCLPYNQKADVYSFGIILWELNAYKKPYDGMNKEEFYERVVEGNERPMINKKWPEELVQLMQDCWSSDMDVRPSFRVIVERLDEMLSK 676          
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Match: A0A7S3HAA9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HAA9_9STRA)

HSP 1 Score: 178 bits (451), Expect = 4.350e-51
Identity = 88/167 (52.69%), Postives = 114/167 (68.26%), Query Frame = 1
Query:  379 FVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATL 879
            ++ +L+RA +MAEA++Y+H+    GAT++ HRDLKPDNVGF ADGTLKLFDFGL  C +  E+ T  Y+MTG TG++RYM PEVA  + YNEKVDVYSFG+MLW+M +    F+G+   EF  +V+ G  RP  D SW      L+  CW+ D  KRP F  IV  L
Sbjct:   20 YIQLLQRARDMAEALDYLHFRCHPGATII-HRDLKPDNVGFTADGTLKLFDFGLVTCVKTRESPTDSYTMTGYTGSLRYMAPEVALREPYNEKVDVYSFGIMLWQMARDNLPFTGLGKTEFMQEVVRGNVRPKLDRSWPDGFSNLLTACWARDPQKRPSFSVIVIEL 185          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z8Z5_9STRA5.030e-260100.00Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A835ZE86_9STRA6.640e-9953.74Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A6H5L2R6_9PHAE2.670e-7948.62Protein kinase domain-containing protein n=1 Tax=E... [more]
D7FS28_ECTSI8.600e-7848.23Protein kinase domain-containing protein n=1 Tax=E... [more]
A0A835YNL8_9STRA8.820e-6440.31Kinase-like domain-containing protein n=1 Tax=Trib... [more]
A0A6H5LAW2_9PHAE2.370e-5637.97Protein kinase domain-containing protein n=2 Tax=E... [more]
A0A7S2S189_9STRA9.010e-5538.26Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2LC32_9STRA9.100e-5536.49Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]
A0A7S2E226_9STRA2.770e-5137.33Hypothetical protein n=2 Tax=Helicotheca tamesis T... [more]
A0A7S3HAA9_9STRA4.350e-5152.69Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_247contigContig_247:4890..8908 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354439|estExt_Genemark1.C_Ctg_2470002
KEGG TC1.I.1
BRITEko00000,ko00001,ko00002,ko03019,ko03036
KEGG ModuleM00427
KEGG Pathwayko03013,map03013
KEGG koko:K14304
GOsGO:0000323,GO:0000902,GO:0000904,GO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005794,GO:0005795,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006897,GO:0006914,GO:0006928,GO:0006935,GO:0006950,GO:0006979,GO:0006996,GO:0007005,GO:0007017,GO:0007018,GO:0007154,GO:0007165,GO:0007275,GO:0007399,GO:0007409,GO:0007411,GO:0007528,GO:0008088,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009267,GO:0009605,GO:0009653,GO:0009894,GO:0009987,GO:0009991,GO:0010008,GO:0010506,GO:0010721,GO:0010769,GO:0010771,GO:0010941,GO:0010970,GO:0010975,GO:0010977,GO:0012505,GO:0016020,GO:0016043,GO:0016049,GO:0016192,GO:0016197,GO:0016241,GO:0016301,GO:0016310,GO:0016482,GO:0016740,GO:0016772,GO:0016773,GO:0017016,GO:0017137,GO:0018105,GO:0018193,GO:0018209,GO:0019222,GO:0019538,GO:0019899,GO:0022008,GO:0022603,GO:0022604,GO:0023052,GO:0030030,GO:0030100,GO:0030154,GO:0030182,GO:0030424,GO:0030425,GO:0030705,GO:0031090,GO:0031175,GO:0031267,GO:0031323,GO:0031329,GO:0031344,GO:0031345,GO:0031410,GO:0031594,GO:0031667,GO:0031668,GO:0031669,GO:0031902,GO:0031982,GO:0031984,GO:0032418,GO:0032501,GO:0032502,GO:0032879,GO:0032886,GO:0032989,GO:0032990,GO:0033036,GO:0033043,GO:0033267,GO:0033554,GO:0034613,GO:0034976,GO:0035556,GO:0036211,GO:0036465,GO:0036477,GO:0040007,GO:0040011,GO:0042147,GO:0042221,GO:0042330,GO:0042594,GO:0042995,GO:0043005,GO:0043025,GO:0043170,GO:0043195,GO:0043198,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043679,GO:0044087,GO:0044088,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044267,GO:0044297,GO:0044306,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044463,GO:0044464,GO:0045202,GO:0045595,GO:0045596,GO:0045664,GO:0045665,GO:0046907,GO:0048311,GO:0048312,GO:0048468,GO:0048488,GO:0048489,GO:0048519,GO:0048523,GO:0048588,GO:0048589,GO:0048666,GO:0048667,GO:0048675,GO:0048699,GO:0048731,GO:0048812,GO:0048814,GO:0048846,GO:0048856,GO:0048858,GO:0048869,GO:0050767,GO:0050768,GO:0050773,GO:0050774,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050808,GO:0050896,GO:0051020,GO:0051049,GO:0051093,GO:0051128,GO:0051129,GO:0051179,GO:0051234,GO:0051239,GO:0051241,GO:0051493,GO:0051640,GO:0051641,GO:0051645,GO:0051646,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051683,GO:0051716,GO:0051960,GO:0051961,GO:0060284,GO:0060341,GO:0060548,GO:0060560,GO:0060627,GO:0061174,GO:0061564,GO:0061845,GO:0061919,GO:0065007,GO:0065008,GO:0070507,GO:0070727,GO:0071212,GO:0071496,GO:0071704,GO:0071840,GO:0090128,GO:0097447,GO:0097458,GO:0097479,GO:0097480,GO:0097485,GO:0097708,GO:0098588,GO:0098657,GO:0098693,GO:0098791,GO:0098793,GO:0098805,GO:0098852,GO:0099003,GO:0099111,GO:0099174,GO:0099504,GO:0120025,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0140096,GO:0150034,GO:1900242,GO:1901214,GO:1901215,GO:1901564,GO:1902115,GO:1902284,GO:1903421,GO:1990033,GO:1990138,GO:2000026,GO:2000171,GO:2000331,GO:2000785
Descriptionprotein kinase activity
COG categoryKLT
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0515@1|root,KOG0192@2759|Eukaryota
Evalue9.56e-79
Seed ortholog2880.D7FS28
Hectar predicted targeting categoryother localisation
TranscriptId354761
TrackFilteredModels1
ProteinId354439
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354439gene_18393Tribonema minus UTEX_B_3156 geneContig_247 4890..8908 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354439Trimin1|354439|estExt_Genemark1.C_Ctg_2470002Tribonema minus UTEX_B_3156 polypeptideContig_247 4928..8908 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18393_8exon_18393_8Tribonema minus UTEX_B_3156 exonContig_247 4890..5128 -
exon_18393_7exon_18393_7Tribonema minus UTEX_B_3156 exonContig_247 5661..5957 -
exon_18393_6exon_18393_6Tribonema minus UTEX_B_3156 exonContig_247 6235..6342 -
exon_18393_5exon_18393_5Tribonema minus UTEX_B_3156 exonContig_247 6746..6875 -
exon_18393_4exon_18393_4Tribonema minus UTEX_B_3156 exonContig_247 7045..7163 -
exon_18393_3exon_18393_3Tribonema minus UTEX_B_3156 exonContig_247 7372..7521 -
exon_18393_2exon_18393_2Tribonema minus UTEX_B_3156 exonContig_247 7946..8017 -
exon_18393_1exon_18393_1Tribonema minus UTEX_B_3156 exonContig_247 8888..8908 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_18393UTR3_18393Tribonema minus UTEX_B_3156 three_prime_UTRContig_247 4890..4927 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18393CDS_18393Tribonema minus UTEX_B_3156 CDSContig_247 8888..8908 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18393 ID=mRNA_18393|Name=jgi.p|Trimin1|354439|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1136bp|location=Sequence derived from alignment at Contig_247:4890..8908- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGAAAAAACCCAAGCTACAGTCTGCCGCAGACGCCAAGACGTCGCCTGA
GATCACCATCGAGTCCTGCCGCAGGGAGCGAGCAGCAAGCGAGGTGCAGT
GGAACGAGCTACAGAACCTGCGCTACGTTGGCCGTGGCGCGATGTGCCGA
ATCTACAGCGCGAACCTTGGGGGGCGCAAAGTGGCAGTGAAAATCGCACG
CGACGACTGCAAAGATCCCTCGGCTGCGGAGCACGATCTGGAGTACAGGT
TCCTGGTGCTCGAGTACCTGGAGCTTGGAACGCTTGCGGATGGGATTGAG
ACGGGGGTGATGCAGGGGCACCAGCAGTCTACCCTCGCAAAGCTGGTCAA
AGGCGCCAAGCGGAATAAGCACAGCCAGTTCGTGATCATGCTGGAGCGCG
CCCTGGAAATGGCAGAAGCGATGGAGTACATGCACTACGGGCTGTGCGGC
GGAGCGACCGTGGTGCTGCACCGCGACCTGAAGCCAGATAACGTGGGCTT
TGCAGCGGACGGCACTCTCAAGCTGTTTGACTTTGGCCTGGCGCGCTGCC
AGCGACGAGCAGAGAACAACACAGCGCGCTACAGCATGACTGGCAACACG
GGGACCGTGCGCTACATGCCTCCCGAAGTCGCCCGCGGCCAGTGCTACAA
CGAGAAGGTCGACGTCTACTCGTTTGGCCTCATGCTGTGGGAGATGCTGC
AGTACCGCCGCGTCTTCTCTGGCATCAGTGTGCGTGAGTTCTACGCTGAC
GTTCTGGTGGGGGGGCGGCGCCCCACCCCCGACCCGTCCTGGTCGCCTGA
GCTCGTGGCCCTGATGAAGGGGTGCTGGTCGGTGGACTGCAACAAGCGGC
CCTGCTTCAAGAGCATTGTGGCGACGCTCCGCAGCGTCCTTGCACAGTCC
CTTCCCCTGGACGTCACTCGCGCGCCCACTGCGATTTCGCTCGTGAGCAG
TGATGCTCAGGAAGTTGAAGTTGCCAGCCCCAGTCATGCGTCTTCGGGGC
GGTACAGCACCGGCATGCTCGGCCAGCTGCGTCGGCGCATGTCGTTTGCC
GTGACCAGCAAGCGGTCGCTGCAGCGGCAGTCCGCAGGGTTGCGGTGACA
GGCTGCTGAGCGCTGTGTGCCGCTGCTGTAACTGCC
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protein sequence of jgi.p|Trimin1|354439

>Trimin1|354439|estExt_Genemark1.C_Ctg_2470002 ID=Trimin1|354439|estExt_Genemark1.C_Ctg_2470002|Name=jgi.p|Trimin1|354439|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=366bp
MKKPKLQSAADAKTSPEITIESCRRERAASEVQWNELQNLRYVGRGAMCR
IYSANLGGRKVAVKIARDDCKDPSAAEHDLEYRFLVLEYLELGTLADGIE
TGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCG
GATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTARYSMTGNT
GTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYAD
VLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSVLAQS
LPLDVTRAPTAISLVSSDAQEVEVASPSHASSGRYSTGMLGQLRRRMSFA
VTSKRSLQRQSAGLR*
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mRNA from alignment at Contig_247:4890..8908-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18393 ID=mRNA_18393|Name=jgi.p|Trimin1|354439|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4019bp|location=Sequence derived from alignment at Contig_247:4890..8908- (Tribonema minus UTEX_B_3156 )
ATGAAAAAACCCAAGCTACAGGTCTGTCGCGTTTGTCTGCCGGCAGGCAT CCACACAAGTGCTCCTTCTTCGTACGGTACGTGTTTGGCTGAGAGCAAGA GCAAGTACAGCGCTGTCACAGGTGCGCTGTTCGCGTACAAATGTTCGCGC TGTTCGCTGTGCCACGTGCCACGAAGTTCGCTCAGCGCAGAGGCACGCGA AGTTCCGGCGCTATTGAAGTGCAAGCGAATTGCGGAAAGGCGAAGCATCA CGATCGTGCACGTCGTCAGTGTGACGCTGCACCGGATGATGTTAAATTGC AAAACAGACTGTCACGCGCCCATCGCCGCGCCCAACGCATTGTGCTAGGG CCACCAAGGCATCAATATGTATATCGGATGGCTTAACTTTAGTTGTGCAG AATTTGCAGTTGCCCCTAGAAATTTCGATGAGGCCAGGCCAGACCAGCCC AAGCAGACTTGCCAGGGCGTGGGGCATGCAGCTAGCTGGGGATACAGTAG TCATCAATGGCGATTCGCAGCGCGCGCTGTAGTACCAGCCGCTCGAGTCA TTGACGGCGGCGGCCGCGCGTTGCGCTCAAAAGAAGTAGGTGCAGTAGCA TCTTCATCGCCGCCGCTTGAAATGACCGCCGTAGCTTCGAAGAGTTGCAG CAACATTGCACTCACTTCTGTTGCTCGACAAAGGTGCAGAAAGCATCCCG ACATACTAGTAGCGACCATGACCGCAGCGCCTCTGGGCAAGTCGGCCTTA ATGGACAGCGCACGCACACCAGGCGCTTGCTGCCGCAGTACAGCTTCAAG CAGCGCATTGACTTGCTGCAATTGCGACGTGCATAGCGTCCAGAGCGGTG CGCCAGCGCAACAGCGCAATGGCTGCTGCGCTACCTTCCAGTCTGCCGCA GACGCCAAGACGTCGCCTGAGATCACCATCGAGTCCTGCCGCAGGGAGCG AGCAGCAAGCGAGGTTGATAGCGTGTCCAGCACCAGCAGCACCAGCTCTT GTGAATCAACCTGCGTGTGCAACGGAGGCACCACGCTCTTCAGCTCCGAT GCAAGCCCTCAATACAGAGAGGTAAGCACCTGCTGCACGTTGGCACCCAC TGCACAACGGATGTCGACAAAGCGTCATGTGTTTTCAAGCGAGCATTGCG AGTCACGGTTCCTCGTGTGTCATCACACAGCACGCGCTGAATCTGCAGTA CCCTGCGGCTCGGCAGGCGAAGCGCCTGTCTCTCATCTAAACAACTTTAC TGCGAAACCTGTCCGACTGGCGCGGGGCGACATGCCGTCGCTTCGTTCCT CGCATGTCGACTTCAACGCTCAACACAGGGGCACCGACGGCTGGCTCACA ACAACTGACCTCTCTCTTGCGCGTCCTCGCTGTGCAGGTGCAGTGGAACG AGCTACAGAACCTGCGCTACGTTGGCCGTGGCGCGATGTGCCGAATCTAC AGCGCGAACCTTGGGGGGCGCAAAGTGGCAGTGAAAATCGCACGCGACGA CTGCAAAGATCCCTCGGCTGCGGAGCACGATCTGGAGGTCGAGATGCACG TGCTCCAGCATATGCGGCACCGGTACGTCAACCTCCGCTGTTTTGCCCTG CTGCTCGCCTCGTGTGCCTGCATGCCATGTATGTCCTTGCCTACGTGACA GTCACAGCATCTAACGAATCTAGTGCTTTCATTGCATCTGCAGGAATATC ATTCAGCTGCTGGGCGCTGGTGTCCGTGCTTGTGGCAATCAGCAGTACAG GTTCCTGGTGCTCGAGTACCTGGAGCTTGGAACGCTTGCGGATGGGATTG AGACGGGGGTGATGCAGGGGCACCAGCAGTCTACCCTCGCAAAGCTGGTC AAAGGCGCCAAGCGGTGAGTTCATGCTGCAGCGGCAGTCGCTGTTCTCTA AGAGGTCTACACTGCATCATTTGCTTCTTCCAGTCCCCTGTTGAGCACAC ATGCTAAGAAGCTGTATGCCTCTTTTATCTTGTGCCGTCCTCATAGCTCA TGTTCCCTCGCTGCATTCCGTTGATTGCGACAGGAATAAGCACAGCCAGT TCGTGATCATGCTGGAGCGCGCCCTGGAAATGGCAGAAGCGATGGAGTAC ATGCACTACGGGCTGTGCGGCGGAGCGACCGTGGTGCTGCACCGCGACCT GAAGCCAGATAACGTGAGCCCCCCCCCCCTATTGTGGTTTGCACTTGAAG TTGTGCACTTGACGTTGCAGTTTCTTTGTGGTTTCGTTCCACAACTGGTC CCAGATCTCTTCGAGATCTTGGAGCGTGATGACTCAATGATGATGAGCTG GCACAGTCCAGGTTTCATGCTTACTCTTACTGTTTGATGTCACTCCTACC CACCCTTGCCTTGGCACTCGGCATTGCTATGTGAGTCCTCGACTGTTACC TTAACCTTAGCCCCAAGTGTGAACTTGCGCGTTACCAGTTTGACCCGCCG CAGCCGAGCATGTCAGCTGCGCAGGCATCAGAGCTGCCTCTGCTGCTTAC AACAACACTTCCGTGTAAGTCATGCGCTCACCAGCCTGTGTGCACTGCTG TTTGCGATGATCGCAGGTGGGCTTTGCAGCGGACGGCACTCTCAAGCTGT TTGACTTTGGCCTGGCGCGCTGCCAGCGACGAGCAGAGAACAACACAGCG CGCTACAGCATGACTGGCAACACGGTGAGTCATGGCTCATGAGTCAGTGC TTGGCGCCTTTACTTCAAATGTGCTTCCGCATTCTACTATGTTGTGAATG CAGTGCTCAAGCCTGTGCATCAGGCATGCGACCTGTGGAATCAGCATACC TTCCAATGCATAGCATGCATGTTCTCCCTTCCTGGCTTGCGCATGTGCCC CTGGTATGGTGCCTCACCGCATGGCATGCCCCCCCCCCCCCACCCCCCCC TCTCACACTCAAACCATAACCCTAACCTCAACCCTACCCCCACCATTGCA GGGGACCGTGCGCTACATGCCTCCCGAAGTCGCCCGCGGCCAGTGCTACA ACGAGAAGGTCGACGTCTACTCGTTTGGCCTCATGCTGTGGGAGATGCTG CAGTACCGCCGCGTCTTCTCTGGCATCAGTGTGCGTGAGTTCTACGCTGA CGTTCTGGTGGGGGGGCGGCGCCCCACCCCCGACCCGTCCTGGTCGCCTG AGCTCGTGGCCCTGATGAAGGGGTGCTGGTCGGTGGACTGCAACAAGCGG CCCTGCTTCAAGAGCATTGTGGCGACGCTCCGCAGCGTCCTTGCACAGGT GAGCGACGGCGCCTTTGTGTTTGTCGGGTTGTTGGTAGGGCAGAGACTCG AGGTTGAGGCAGGTTGAACTGAATTGCATGTGCACTACAAGTGCTCGAGT ACTATCCTACTTTGTGCTCCTCGGCTGAACGCACATCACCTCAACCTCGC TTTGCACGCTGTGGTTTAGAAGTCAGCCTTGACTGGTGTTTGAGTGGGTT TCAGTGATGTTGCCATTGTGTAACCTGAATAGGTTTCGTGACAGCAGTTG CGTCTGCGCCTCTTACCTGCTCTGCACTACTCCTCTGTGAGCCTTATTCA AGACGTGTATTAACCAATGCTCGTGTTCTCCTGCTGCTCTACAGGAGAGG CAAAACGCTCAGCCAGCCGCTCCCTCAGCCCAGCAGGCGTCATCACAGAA GGCAGCACCATGCAGCGCCACCGCTGCCACCAGCACGCAGGACGCATCTC AAGCTCCTGTGGCAACAGTGTCCCAGCCTTCACTGCGGCAGATGGCTGCA GCCCCGGTCAAGTCGGTGCCCCGCTGCCAGTCCCTTCCCCTGGACGTCAC TCGCGCGCCCACTGCGATTTCGCTCGTGAGCAGTGATGCTCAGGAAGTTG AAGTTGCCAGCCCCAGTCATGCGTCTTCGGGGCGGTACAGCACCGGCATG CTCGGCCAGCTGCGTCGGCGCATGTCGTTTGCCGTGACCAGCAAGCGGTC GCTGCAGCGGCAGTCCGCAGGGTTGCGGTGACAGGCTGCTGAGCGCTGTG TGCCGCTGCTGTAACTGCC
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Coding sequence (CDS) from alignment at Contig_247:4890..8908-

>mRNA_18393 ID=mRNA_18393|Name=jgi.p|Trimin1|354439|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1098bp|location=Sequence derived from alignment at Contig_247:4890..8908- (Tribonema minus UTEX_B_3156 )
ATGAAAAAACCCAAGCTACAGTCTGCCGCAGACGCCAAGACGTCGCCTGA
GATCACCATCGAGTCCTGCCGCAGGGAGCGAGCAGCAAGCGAGGTGCAGT
GGAACGAGCTACAGAACCTGCGCTACGTTGGCCGTGGCGCGATGTGCCGA
ATCTACAGCGCGAACCTTGGGGGGCGCAAAGTGGCAGTGAAAATCGCACG
CGACGACTGCAAAGATCCCTCGGCTGCGGAGCACGATCTGGAGTACAGGT
TCCTGGTGCTCGAGTACCTGGAGCTTGGAACGCTTGCGGATGGGATTGAG
ACGGGGGTGATGCAGGGGCACCAGCAGTCTACCCTCGCAAAGCTGGTCAA
AGGCGCCAAGCGGAATAAGCACAGCCAGTTCGTGATCATGCTGGAGCGCG
CCCTGGAAATGGCAGAAGCGATGGAGTACATGCACTACGGGCTGTGCGGC
GGAGCGACCGTGGTGCTGCACCGCGACCTGAAGCCAGATAACGTGGGCTT
TGCAGCGGACGGCACTCTCAAGCTGTTTGACTTTGGCCTGGCGCGCTGCC
AGCGACGAGCAGAGAACAACACAGCGCGCTACAGCATGACTGGCAACACG
GGGACCGTGCGCTACATGCCTCCCGAAGTCGCCCGCGGCCAGTGCTACAA
CGAGAAGGTCGACGTCTACTCGTTTGGCCTCATGCTGTGGGAGATGCTGC
AGTACCGCCGCGTCTTCTCTGGCATCAGTGTGCGTGAGTTCTACGCTGAC
GTTCTGGTGGGGGGGCGGCGCCCCACCCCCGACCCGTCCTGGTCGCCTGA
GCTCGTGGCCCTGATGAAGGGGTGCTGGTCGGTGGACTGCAACAAGCGGC
CCTGCTTCAAGAGCATTGTGGCGACGCTCCGCAGCGTCCTTGCACAGTCC
CTTCCCCTGGACGTCACTCGCGCGCCCACTGCGATTTCGCTCGTGAGCAG
TGATGCTCAGGAAGTTGAAGTTGCCAGCCCCAGTCATGCGTCTTCGGGGC
GGTACAGCACCGGCATGCTCGGCCAGCTGCGTCGGCGCATGTCGTTTGCC
GTGACCAGCAAGCGGTCGCTGCAGCGGCAGTCCGCAGGGTTGCGGTGA
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