mRNA_18393 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Match: A0A835Z8Z5_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Z5_9STRA) HSP 1 Score: 715 bits (1846), Expect = 5.030e-260 Identity = 365/365 (100.00%), Postives = 365/365 (100.00%), Query Frame = 1 Query: 1 MKKPKLQSAADAKTSPEITIESCRRERAASEVQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLEYRFLVLEYLELGTLADGIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSVLAQSLPLDVTRAPTAISLVSSDAQEVEVASPSHASSGRYSTGMLGQLRRRMSFAVTSKRSLQRQSAGLR 1095 MKKPKLQSAADAKTSPEITIESCRRERAASEVQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLEYRFLVLEYLELGTLADGIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSVLAQSLPLDVTRAPTAISLVSSDAQEVEVASPSHASSGRYSTGMLGQLRRRMSFAVTSKRSLQRQSAGLR Sbjct: 1 MKKPKLQSAADAKTSPEITIESCRRERAASEVQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLEYRFLVLEYLELGTLADGIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSVLAQSLPLDVTRAPTAISLVSSDAQEVEVASPSHASSGRYSTGMLGQLRRRMSFAVTSKRSLQRQSAGLR 365
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Match: A0A835ZE86_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE86_9STRA) HSP 1 Score: 315 bits (808), Expect = 6.640e-99 Identity = 158/294 (53.74%), Postives = 195/294 (66.33%), Query Frame = 1 Query: 88 SEVQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLE---------------------------YRFLVLEYLELGTLADGIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSV 888 +++ W +L+NL Y+ GAMCRIYSA G KV VK+ RDDC+DP AEHDLE YRFLVLEYLE+GTLAD + G G +++ K++KG K+ + V MLERA+E+AEA+EY+H+ +CGGA V+HRDLKPDN+GF ADGTLKLFDFGLARC +R ARY MTG TG++RYM PEV YNEKVDVY+FGL+LWEMLQYRRVF G+SV +FY V+ GG RP D SW P L L+ CW D +KRP F I A L+ + Sbjct: 133 TKIVWEDLKNLFYMTEGAMCRIYSAEYRGAKVVVKLPRDDCEDPEIAEHDLEVELEVLWGLDHRHIIKLLGAGLREIPPYRFLVLEYLEMGTLADRLNAGAPPGQEETGYNKIIKGTKKYQRFHQVTMLERAMELAEALEYLHHSVCGGAAFVVHRDLKPDNIGFKADGTLKLFDFGLARCVKRRARVNARYDMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLQYRRVFEGMSVGDFYQRVVNGGIRPPLDSSWPPALRKLIDLCWHADVDKRPDFHYIAAQLKDI 426
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Match: A0A6H5L2R6_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2R6_9PHAE) HSP 1 Score: 265 bits (677), Expect = 2.670e-79 Identity = 141/290 (48.62%), Postives = 180/290 (62.07%), Query Frame = 1 Query: 94 VQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLE---------------------------YRFLVLEYLELGTLADGIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLR 882 +QW+EL + Y+ GAMC IYSA L G KVAVKI R DC++P+ AEHDLE +RFLVLE+LELGTLAD ++ + S A+ K K+ V MLER++E+A A+E++HY + ++HRDLKPDNVGF ADGTLKLFDFGLAR +R ARY MTG TG++RYM PEV YNEKVDVY+FGL+LWEML+ RRVF G+ V +FY V+ G RP D +W +L L+ CW D ++RP F++I LR Sbjct: 203 LQWSELSKVTYMTMGAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKPHRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYHMPD--MFIVHRDLKPDNVGFKADGTLKLFDFGLARVVKRRNRVNARYEMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLEDRRVFDGMGVTDFYERVVNAGARPNLDSAWPQDLRKLISQCWHADVDRRPNFRTIAERLR 490
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Match: D7FS28_ECTSI (Protein kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS28_ECTSI) HSP 1 Score: 254 bits (650), Expect = 8.600e-78 Identity = 136/282 (48.23%), Postives = 175/282 (62.06%), Query Frame = 1 Query: 136 GAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLE---------------------------YRFLVLEYLELGTLADGIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSVLAQS 900 GAMC IYSA L G KVAVKI R DC++P+ AEHDLE +RFLVLE+LELGTLAD ++ + S A+ K K+ V MLER++E+A A+E++HY + ++HRDLKPDNVGF ADGTLKLFDFGLAR +R ARY MTG TG++RYM PEV YNEKVDVY+FGL+LWEML+ RRVF G+ V +FY V+ G RP D +W +L L+ CW D ++RP F++I LR++ + + Sbjct: 4 GAMCEIYSAELDGVKVAVKIPRKDCEEPAVAEHDLEVELDVLKRVSHKHILGLIGAGNREQKPHRFLVLEFLELGTLADKLDGDAEEAANGSAFARRQKRTKKYLDFYMVTMLERSMELALALEHLHYHMPD--MFIVHRDLKPDNVGFKADGTLKLFDFGLARVVKRRNRVNARYEMTGETGSMRYMAPEVVESLPYNEKVDVYAFGLLLWEMLEDRRVFDGMGVTDFYERVVNAGARPNLDSAWPQDLRKLISQCWHADVDRRPNFRTIAERLRTLYSNA 283
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Match: A0A835YNL8_9STRA (Kinase-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL8_9STRA) HSP 1 Score: 216 bits (550), Expect = 8.820e-64 Identity = 129/320 (40.31%), Postives = 165/320 (51.56%), Query Frame = 1 Query: 142 MCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLEY-----------------------------RFLVLEYLELGTLADGIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRR---------------------------------------AENNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSVLAQ 897 MCRIYSA G KVAVK RD+ +D + AE DLE RFLVLEYLE GTL D I G + L +L+ G K+ +H + LERA ++A+A+EY+H G AT VLHRD+K +N GF ADGTLKLFDFGLA C R ARY MTGNTGT RYM PEVAR + YN VDVYSFG++LWEML R F+ + + + V+ G RP D +W + +L++GCW+ D ++RP ++ LR+VLA+ Sbjct: 1 MCRIYSAQWQGVKVAVKAPRDESRDCAGAERDLELELHLLQHLHHRHIIKLIGAGWHSVGRRLSRFLVLEYLEGGTLGDAIAQGAASRGRMPILKRLLGGHKKTRHQNVLQALERATQLADALEYLHCPGGGPATAVLHRDIKAENCGFTADGTLKLFDFGLAACAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGGCARYHMTGNTGTSRYMAPEVARCEPYNASVDVYSFGVLLWEMLSGGRAFANFNEQLLRSAVVYGSHRPELDRAWPAPIKSLLQGCWNADPDQRPDATAVARCLRAVLAE 320
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Match: A0A6H5LAW2_9PHAE (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LAW2_9PHAE) HSP 1 Score: 199 bits (507), Expect = 2.370e-56 Identity = 120/316 (37.97%), Postives = 164/316 (51.90%), Query Frame = 1 Query: 94 VQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLEY--------------------------------------------------RFLVLEYLELGTLADGIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARC-QRRAENNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSV 888 + + EL++++Y+ G MC IY+A GR+V VK+ RDDC P A DLE RF++LEYL GTL + + T ++ +V+ ++N ++ AL++A A+ Y+H G+ VV HRDLKP+N+ F+ DG LKLFDFGLA+ +RR + RY MTG TG+ RYM PEVA YNEK DVYSFGL+LWEML RR F G++ +EF V+ GGRRP WS L LM+ CW D + RP F+ + TL + Sbjct: 40 LDFEELRDVQYLTNGGMCSIYTAEWRGRRVVVKMPRDDCAQPEVARKDLETEIDILQRLQHPNIVEMLGAGFVNPLDVGPDGGGGERGEFRDLDQANAESKRFVLLEYLVGGTLTESMLT--RNPPADGMMSSVVRRWQQNWQFPTKKAIDSALQLASALSYLHGRAIEGSFVV-HRDLKPENIAFSGDGRLKLFDFGLAKIVRRRGGRLSQRYEMTGETGSTRYMCPEVAMQLPYNEKADVYSFGLILWEMLSLRRPFEGLNRKEFVQSVIKGGRRPPLQQEWSAALRELMRRCWDEDMDTRPEFEEVEDTLLQI 352
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Match: A0A7S2S189_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S189_9STRA) HSP 1 Score: 201 bits (510), Expect = 9.010e-55 Identity = 114/298 (38.26%), Postives = 165/298 (55.37%), Query Frame = 1 Query: 91 EVQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLEY--------------------------RFLVLEYLELGTLAD--GIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTAR-YSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSVLAQ 897 +++W+ L N+ Y+ G I++A L V VK + +C+D + A +++E RF+VLE L+ G+L G +T + ++ + KH +V +L+ A +AEAMEY+H G +VLHRDLKPDN+GF DGT+KL DFGLAR + +T Y M+G TG++RYM PEVA GQ YN K DVYSFG++LWEML +++ F G+ +F+ V GG RPT + W E +MK CWS D RP F+++VA L +L + Sbjct: 373 DLRWSNLSNVEYLTDGGNSWIHTAVLNRHPVVVKWLKPECQDLAVAINEIEAELDIHAQLQHSHIVSLCGAGLTSKGSRFMVLERLDGGSLTQVLGYDTRIRDRRRRFW---------KKKHFTYVEVLKCARSIAEAMEYLHSDAIPGC-MVLHRDLKPDNIGFTLDGTIKLIDFGLARVVENSSPDTDELYEMSGETGSLRYMAPEVADGQPYNHKADVYSFGIILWEMLAHKKPFDGMDKEQFFERVTYGGERPTINKKWPTEFTDIMKSCWSYDSESRPNFQTVVAKLNKILTK 660
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Match: A0A7S2LC32_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LC32_9STRA) HSP 1 Score: 193 bits (490), Expect = 9.100e-55 Identity = 108/296 (36.49%), Postives = 165/296 (55.74%), Query Frame = 1 Query: 94 VQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLE--------------------------YRFLVLEYLELGTLAD--GIETGVMQGHQQSTLAKLVKGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTAR-YSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSVLA 894 ++WN LQN+ Y+ G I++A + G+ V VK + +C+D + A +++E RF+VLE L+ GTL G +T + ++ + K ++ +L A +A+A+ Y H G T+VLHRD+KPDN+GF DGTLKL DFGLA+ A + YS++G TG++RYM PEVA + YN K DVYSFG++LWEML Y++ + G++ FY ++ GG RP + W ELV+L+ CWS D +RP F ++V L ++++ Sbjct: 46 MKWNSLQNIEYLTDGGNSWIHTAVVNGKSVVVKTLKPECQDMAMAINEIEAELDVHARLSHENIVALVGAGLTSKGVRFVVLERLDGGTLTQVLGYDTRIRDRRRRFF---------KRKQLSYLEVLNHARSLADALGYCH-GKAVPGTLVLHRDVKPDNIGFTIDGTLKLIDFGLAKVVDNATPDCNDVYSLSGETGSLRYMAPEVADNRPYNHKADVYSFGIILWEMLAYKKPYDGLNRESFYVRIVDGGERPPVNKKWPKELVSLVTDCWSADIEQRPSFSAVVERLTNMIS 331
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Match: A0A7S2E226_9STRA (Hypothetical protein n=2 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2E226_9STRA) HSP 1 Score: 191 bits (486), Expect = 2.770e-51 Identity = 109/292 (37.33%), Postives = 171/292 (58.56%), Query Frame = 1 Query: 82 AASEVQWNELQNLRYVGRGAMCRIYSANLGGRKVAVKIARDDCKDPSAAEHDLEYRFLVLEYLE---------LGTLADGIETGVMQGHQQSTLAKLV----------KGAKRNKHSQFVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAE-NNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATLRSVLAQ 897 A+ ++W +L N+ Y+ G I++A L GR V VK + +C+D + A +++E + L+ GT + G+ V++ TL++++ + R K +V +L+ A +A+A++Y H GA + LHRDLKPDN+GFA DGT+K+ DFGLAR + ++ N+ Y M+G TG++RYM PEVA+ YN+K DVYSFG++LWE+ Y++ + G++ EFY V+ G RP + W ELV LM+ CWS D + RP F+ IV L +L++ Sbjct: 386 ASLNLKWGQLNNVEYLTDGGNNWIHTAVLNGRAVVVKTLKPECQDVALAINEIELELDIHSKLDHPFICGLVGAGTTSKGVRFIVLERLDGGTLSQMLGYDNRIRDRRRRFWRKKQFAYVEVLKFARCIADALDYCHRLAIPGA-MCLHRDLKPDNIGFAIDGTVKILDFGLARIVKYSDLNSNEVYQMSGQTGSLRYMAPEVAKCLPYNQKADVYSFGIILWELNAYKKPYDGMNKEEFYERVVEGNERPMINKKWPEELVQLMQDCWSSDMDVRPSFRVIVERLDEMLSK 676
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Match: A0A7S3HAA9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HAA9_9STRA) HSP 1 Score: 178 bits (451), Expect = 4.350e-51 Identity = 88/167 (52.69%), Postives = 114/167 (68.26%), Query Frame = 1 Query: 379 FVIMLERALEMAEAMEYMHYGLCGGATVVLHRDLKPDNVGFAADGTLKLFDFGLARCQRRAENNTARYSMTGNTGTVRYMPPEVARGQCYNEKVDVYSFGLMLWEMLQYRRVFSGISVREFYADVLVGGRRPTPDPSWSPELVALMKGCWSVDCNKRPCFKSIVATL 879 ++ +L+RA +MAEA++Y+H+ GAT++ HRDLKPDNVGF ADGTLKLFDFGL C + E+ T Y+MTG TG++RYM PEVA + YNEKVDVYSFG+MLW+M + F+G+ EF +V+ G RP D SW L+ CW+ D KRP F IV L Sbjct: 20 YIQLLQRARDMAEALDYLHFRCHPGATII-HRDLKPDNVGFTADGTLKLFDFGLVTCVKTRESPTDSYTMTGYTGSLRYMAPEVALREPYNEKVDVYSFGIMLWQMARDNLPFTGLGKTEFMQEVVRGNVRPKLDRSWPDGFSNLLTACWARDPQKRPSFSVIVIEL 185 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354439 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_18393 ID=mRNA_18393|Name=jgi.p|Trimin1|354439|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1136bp|location=Sequence derived from alignment at Contig_247:4890..8908- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAAAAAACCCAAGCTACAGTCTGCCGCAGACGCCAAGACGTCGCCTGAback to top protein sequence of jgi.p|Trimin1|354439 >Trimin1|354439|estExt_Genemark1.C_Ctg_2470002 ID=Trimin1|354439|estExt_Genemark1.C_Ctg_2470002|Name=jgi.p|Trimin1|354439|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=366bp MKKPKLQSAADAKTSPEITIESCRRERAASEVQWNELQNLRYVGRGAMCRback to top mRNA from alignment at Contig_247:4890..8908- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_18393 ID=mRNA_18393|Name=jgi.p|Trimin1|354439|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4019bp|location=Sequence derived from alignment at Contig_247:4890..8908- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_247:4890..8908- >mRNA_18393 ID=mRNA_18393|Name=jgi.p|Trimin1|354439|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1098bp|location=Sequence derived from alignment at Contig_247:4890..8908- (Tribonema minus UTEX_B_3156 )back to top |