mRNA_1834 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|163657
Unique NamemRNA_1834
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|163657 vs. uniprot
Match: A0A836CFT8_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFT8_9STRA)

HSP 1 Score: 683 bits (1762), Expect = 2.400e-248
Identity = 338/338 (100.00%), Postives = 338/338 (100.00%), Query Frame = 1
Query:    1 MAATAAELFATMGTGINLGNTLDNAQNNRDTEVIARRLTALRQKGFQHVRIPVTWQPMGCSKCRVNSPSFVALVEGAVNAAIALGFTVILNAHHEAWLTSYDGSSGMNAAFADLWRKVALHFKSVPQDKLLFELLNEPQGTMCPCTPAAQQLTRTLNATGYNAVRAISPTRIVLIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAITVHSYGPPKFALPKGSNAYFLDMADPEAAVCQHVKKLIAELLKLRLALGSTPVHLGEFGVGRENLADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRNANCVDFTFDLAGDVLGTTATP 1014
            MAATAAELFATMGTGINLGNTLDNAQNNRDTEVIARRLTALRQKGFQHVRIPVTWQPMGCSKCRVNSPSFVALVEGAVNAAIALGFTVILNAHHEAWLTSYDGSSGMNAAFADLWRKVALHFKSVPQDKLLFELLNEPQGTMCPCTPAAQQLTRTLNATGYNAVRAISPTRIVLIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAITVHSYGPPKFALPKGSNAYFLDMADPEAAVCQHVKKLIAELLKLRLALGSTPVHLGEFGVGRENLADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRNANCVDFTFDLAGDVLGTTATP
Sbjct:    1 MAATAAELFATMGTGINLGNTLDNAQNNRDTEVIARRLTALRQKGFQHVRIPVTWQPMGCSKCRVNSPSFVALVEGAVNAAIALGFTVILNAHHEAWLTSYDGSSGMNAAFADLWRKVALHFKSVPQDKLLFELLNEPQGTMCPCTPAAQQLTRTLNATGYNAVRAISPTRIVLIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAITVHSYGPPKFALPKGSNAYFLDMADPEAAVCQHVKKLIAELLKLRLALGSTPVHLGEFGVGRENLADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRNANCVDFTFDLAGDVLGTTATP 338          
BLAST of jgi.p|Trimin1|163657 vs. uniprot
Match: A0A836CL48_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL48_9STRA)

HSP 1 Score: 617 bits (1590), Expect = 6.410e-222
Identity = 300/338 (88.76%), Postives = 320/338 (94.67%), Query Frame = 1
Query:    1 MAATAAELFATMGTGINLGNTLDNAQNNRDTEVIARRLTALRQKGFQHVRIPVTWQPMGCSKCRVNSPSFVALVEGAVNAAIALGFTVILNAHHEAWLTSYDGSSGMNAAFADLWRKVALHFKSVPQDKLLFELLNEPQGTMCPCTPAAQQLTRTLNATGYNAVRAISPTRIVLIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAITVHSYGPPKFALPKGSNAYFLDMADPEAAVCQHVKKLIAELLKLRLALGSTPVHLGEFGVGRENLADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRNANCVDFTFDLAGDVLGTTATP 1014
            MA TAAELFAT+GTGINLGNTLD AQ++RDT VI RRLTALR+KGF+HVRIPVTWQPMGCS  RVNSPSFVA+VEGAV AAI LGFTVILNAHHEAWLT+YD S  MNAAFADLWRK++LHFKSVPQDKLLFELLNEPQGTMCPCTPAAQQLTRTLNATGYNAVRA+SPTRI+LIQPNNLGDAWAARATYRTPSLLPGQGKDKYLA++VHSYGPP+FALP GSNAYFL+MADPEAAVC+HVK LIAELLKLRLALGSTPVHLGEFG+GREN ADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDR+A  V+FTFDLAG+VLGT  TP
Sbjct:    1 MAVTAAELFATLGTGINLGNTLDTAQHSRDTSVITRRLTALREKGFRHVRIPVTWQPMGCSTNRVNSPSFVAMVEGAVAAAIELGFTVILNAHHEAWLTAYDASPAMNAAFADLWRKISLHFKSVPQDKLLFELLNEPQGTMCPCTPAAQQLTRTLNATGYNAVRAVSPTRIILIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAVSVHSYGPPQFALPSGSNAYFLNMADPEAAVCKHVKTLIAELLKLRLALGSTPVHLGEFGIGRENFADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRDATFVNFTFDLAGEVLGTATTP 338          
BLAST of jgi.p|Trimin1|163657 vs. uniprot
Match: A0A836CEX1_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEX1_9STRA)

HSP 1 Score: 307 bits (787), Expect = 3.260e-99
Identity = 161/342 (47.08%), Postives = 220/342 (64.33%), Query Frame = 1
Query:   13 AAELFATMGTGINLGNTLDNAQNNRDTEVIARRLTALRQKGFQHVRIPVTWQPMGCSKCRVNSPSFVALVEGAVNAAIALGFTVILNAHHEAWLTSYDGSSGMNAAFADLWRKVALHFKSVPQDKLLFELLNEPQGTM--------CPCTPAAQQLTRTLNATGYNAVRAISPTRIVLIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAITVHSYGPPKFALPKGSNAYFLDMADPEAAVCQHVKKLIAELLKLRLALGSTPVHLGEFGVGRENLADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRNANCVDFTFDLAGDVLGTTATP 1014
            AA+L ATM +G+NLGNTLD A ++ D  V+ARRL A+R +G+ HVRIPV+W+P   + CR++ P FV  VE AV+ AI LG  VI+NAHHE WLT YDGS  M   F  +WR++A  F+  PQ+KL+FE+LNEP GTM           +P A  LTR LNA GY  +R++S  R+VLIQPN++G  + A   + TP +LPG G+D+YLA+T+HSY P  F  P GS++ F      EA + Q  + L+  +  + +     PVH+GEFGVGR N   RD+ +V  YYR  +  ARDA IP   WDDG   DF IT F+R+A  + F + ++ + L ++A+P
Sbjct:   10 AAQLLATMKSGLNLGNTLDTATHSTDPAVMARRLDAIRAEGYGHVRIPVSWRPADFAVCRIDVPEFVDKVESAVDHAIGLGLVVIVNAHHEQWLTRYDGSKAMTDEFTSMWRRIATRFRDKPQNKLVFEVLNEPHGTMGGGGGFGGSSQSPEALALTRKLNAAGYTGIRSVSRRRVVLIQPNDMGSMYQAGKMWPTPEMLPGGGRDQYLAVTLHSYAPWAFVGPNGSDSAFASQKSLEADIAQRFESLLRWMQSVPV-----PVHIGEFGVGRVNRWLRDSDMVRAYYRCFSARARDAGIPAAAWDDG--GDFAITKFNRDATSIQFVYGIS-EALLSSASP 343          
BLAST of jgi.p|Trimin1|163657 vs. uniprot
Match: A0A836CFX5_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFX5_9STRA)

HSP 1 Score: 249 bits (637), Expect = 1.700e-77
Identity = 142/341 (41.64%), Postives = 196/341 (57.48%), Query Frame = 1
Query:    1 MAATAAELFATMGTGINLGNTLDNAQNNRDTEVIARRLTALRQKGFQHVRIPVTWQPMGCSKCRVNSPSFVALVEGAVNAAIALGFTVILNAHHEAWLTS-YDGSSGMNAAFADLWRKVALHFKSVPQDKLLFELLNEPQGTM----CPCTPAAQQLTRTLNATGYNAVRAISPTRIVLIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAITVHSYGPPKFALPKGSNAYFLDMADPEAAVCQHVKKLIAELLKLRLALG--STPVHLGEFGVGRENLADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRNANCVDFTFDLAGDVLGT 1002
            MA TA ++  ++GTGINLG   ++ Q++RD + I   L+A++ KGF HVRIPVTW P     C ++ P F+ L++ A + A+ LG TVI+NAHHE WL   YDGS+  N  F +LWR++A  + +  Q +++FE+LNEP           T A   LTR +N  GY  +RA+S TR+VL+QPNN G+ W+    Y   + LPG G DKYL I  H+Y    F L  G N ++  +AD  A V     K +  ++K   A+G  +  +HLGEFGVGR +   RDA IV  YY+  +K  R+  I  T W DG    F +T  D     V + F LA  VL T
Sbjct:    1 MAKTATQVLTSIGTGINLGQVFESKQHSRDADKIRPWLSAVKSKGFGHVRIPVTWYPGTAHVCMLDDPEFMHLLDDATDFAVKLGLTVIINAHHEDWLFQHYDGSAAYNTKFKELWRRIAAKYNAYTQQQVIFEVLNEPTAKFGLGSAAATSACIDLTRKINCAGYAGIRAVSATRVVLVQPNNAGNIWSVPIVYPDKASLPGAGADKYLGIQFHTYDNYNFCLQGGRNDHYKSVADVSADVA----KRLTMIVKWHGAIGKDTVAIHLGEFGVGRLDQRQRDADIVRAYYKLTSKLFREKRICVTAWSDGGW--FALTLTDARQT-VTWPFGLADQVLKT 334          
BLAST of jgi.p|Trimin1|163657 vs. uniprot
Match: A0A835ZM96_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZM96_9STRA)

HSP 1 Score: 237 bits (604), Expect = 1.560e-72
Identity = 136/340 (40.00%), Postives = 191/340 (56.18%), Query Frame = 1
Query:    1 MAATAAELFATMGTGINLGNTLDNAQNNRDTEVIARRLTALRQKGFQHVRIPVTWQPMGCSKCRVNSPSFVALVEGAVNAAIALGFTVILNAHHEAWLTSY-DGSSGMNAAFADLWRKVALHFKSVPQDKLLFELLNEPQGTM----CPCTPAAQQLTRTLNATGYNAVRAISPTRIVLIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAITVHSYGPPKFALPKGSNAYFLDMADPEAAVCQHVKKLIAELLKLRLALG---STPVHLGEFGVGRENLADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRNANCVDFTFDLAGDVL 996
            MA TA ++ + +G G+NLG   ++ QN+R  + +   L A++ KGF HVRIPVTW P     C ++   FV L++ A+  A+ +G T+++NAHHE WL  Y DGS   NA F  LW ++A  +++  Q +LLFE+LNEP G         T    +LTRT+N  GY  +R +  TRIVL+QPN+ G+ WA    Y T + LPG G DK + I  H+Y    F L  G+NA++  + D  A     + K +A L+K    +G   +  +HLGEFGVGR +   RDA IV  YYR  +K  RD  I  T W D     F +T  D +   V + F LA  +L
Sbjct:    1 MAKTATQILSEIGIGLNLGQVFESKQNSRRPDQVRPWLAAVKAKGFGHVRIPVTWYPSDA--CVLDDSEFVHLLDDAIQYAVKIGLTLVINAHHEKWLFDYYDGSDVFNAKFKALWSRIAYKYRAYTQQQLLFEVLNEPDGKFGIGSASTTTGCIELTRTINRVGYEGIRYVDATRIVLVQPNDAGNIWAVPRVYPTKATLPGAGADKSVGIQCHTYDHYNFCLQGGTNAFYKSVDDISA----DIGKRVAMLMKWHTDIGGQDTVALHLGEFGVGRLDQRQRDADIVRAYYRITSKLFRDKSICCTAWSDNGW--FALTTMDASRR-VTWPFGLADQIL 331          
BLAST of jgi.p|Trimin1|163657 vs. uniprot
Match: A0A835Z601_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z601_9STRA)

HSP 1 Score: 234 bits (596), Expect = 2.700e-71
Identity = 131/337 (38.87%), Postives = 182/337 (54.01%), Query Frame = 1
Query:   13 AAELFATMGTGINLGNTLDNAQNNRDTEVIARRLTALRQKGFQHVRIPVTWQPMGCSKCRVNSPSFVALVEGAVNAAIALGFTVILNAHHEAWLTS-YDGSSGMNAAFADLWRKVALHFKSVPQDKLLFELLNEPQGTMCPCTPAAQQ-----LTRTLNATGYNAVRAISPTRIVLIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAITVHSYGPPKFALPKGSNAYFLDMADPEAAVCQHVKKLIAELLKLRLALGSTPV---HLGEFGVGRENLADRDAPIVHLYYRTIAKAARDACIPPTVWDDGTGNDFEITNFDRNANCVDFTFDLAGDVL 996
            A+++   +G G+NLG T ++  N+R    +   L  +RQKGF HVRIPVTW P     C++N   F+  ++ ++  A+ +G  VILN HHE W+   YDGS   N  F  LW ++A  +K  PQ+KL+FE+LNEP G       +A       LTR +N  G  A+RA+  TRIVL+QPN +G+ W+    Y +   LPG G DKYL +  H+Y   KF L  GSN Y+  + +  A     ++K +  + K  + +G   V   HLGEFGVGR +   RDA IV  YYR  +   R   I  T W DG    F + + D     V F F LA  V+
Sbjct:    6 ASQVLGDIGIGVNLGQTFESKMNSRQPAQVRPWLLGIRQKGFGHVRIPVTWYPGNSHACQLNDALFMQCLDNSIEYAVKIGLAVILNTHHEDWIIDGYDGSDLYNVKFKKLWTQIATRYKRYPQNKLIFEVLNEPSGKFGKPDESADSSECIALTRLINLVGLEAIRAVDSTRIVLVQPNAMGNVWSVPKVYPSKDTLPGSGADKYLGVQFHTYDHYKFCLQAGSNEYYKSLNELRA----DIQKRVEMIKKWHVTIGGNDVVALHLGEFGVGRLDQRQRDADIVKAYYRLTSLLYRQKGICVTAWSDGGW--FNVASLDSRGT-VQFPFGLADMVI 335          
BLAST of jgi.p|Trimin1|163657 vs. uniprot
Match: A0A835Z688_9STRA (Family 5 glycoside hydrolase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z688_9STRA)

HSP 1 Score: 181 bits (458), Expect = 1.000e-50
Identity = 115/298 (38.59%), Postives = 167/298 (56.04%), Query Frame = 1
Query:   34 MGTGINLGNTLDNAQNNRDTEV-IARRLTALRQKGFQHVRIPVTWQPMGCSKCRVNS-PSFVALVEGAVNAAIALGFTVILNAHHEAWLTS-YDGSSGMNAAFADLWRKVALHFKSVPQDKLLFELLNEPQGTMCPCTPAAQQLTRTLNATGYNAVRAISPTRIVLIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAITVHSYGPPKFALPKGSNAYFLDMADPEAAVCQHVKKLIAELLKLRLALGSTPVHLGEFGVGR--ENLADR-DAPIVHLYYRTIAKAARDACIPPTVWDD 909
            +G G NLGN  D+  N+ D +  + R ++  + KGF HVRIPVTW   G  KC++ S P FV  +  AV  A++L   VI++ HHE+WL   +DGS+ + A F  LW  ++  F  +  D L+F++LNEP              TR +N  GY+A+RA++ TR +L   N++G  + A+A Y T + LPG GKD  LA++VH+YGPP+FAL  GSN  F  +A+  A++     K  A+L K     G   +   EFGVG   ++ A R D  +   Y+RT    + +   P TVW D
Sbjct:    9 LGVGFNLGNRFDSRTNSIDFDTSVKRAISDFKAKGFTHVRIPVTWIYKG--KCKLKSDPYFVQQLTKAVKYAVSLKLFVIVDTHHESWLKDHFDGSATLKATFEQLWTDISHLFADISDDALIFQVLNEPPSNFDIAK------TRLVNQWGYDAIRAVTTTRCILCMGNDMGSPFGAKAVYPTAADLPGAGKDARLALSVHTYGPPEFALQDGSNDVFATVAEVTASI----DKRFAQLKKWIARSGHVTMVWDEFGVGARDDDQARRGDLRVREFYHRTANLCSMEKW-PCTVWCD 293          
BLAST of jgi.p|Trimin1|163657 vs. uniprot
Match: A0A4P6YDL0_9FLAO (Glycoside hydrolase family 5 protein n=1 Tax=Flavobacterium nackdongense TaxID=2547394 RepID=A0A4P6YDL0_9FLAO)

HSP 1 Score: 177 bits (449), Expect = 4.880e-48
Identity = 115/325 (35.38%), Postives = 165/325 (50.77%), Query Frame = 1
Query:   10 TAAELFATMGTGINLGNTLDNAQNNRDTEVIARRLTALRQKGFQHVRIPVTWQPM---------GCSKCRVNSPSFVALVEGAVNAAIALGFTVILNAHHEAWLTSY-DGSSGMNAAFADLWRKVALHFKSVPQDKLLFELLNEPQGTMC------------PCTPAAQQLTRTLNATGYNAVRAIS---PTRIVLIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAITVHSYGPPKFALPKGSNAYFLDMADPEAAVCQHVKKLIAELLKLRLALGSTPVHLGEFGVGRENLADRDAPIVHLYYRTIAKAARDACIPPTVWDD 909
            TA ++   MG G NLGNT DN  N      I   +      G +HVRIPV+W            G  K   N   F+ L + A++ AI+ G  V++N HHE WL  Y DGS+  N  F+ LW  +A +FK    +KL+F++LNEP+GTM             P +  A  LTR +N  GY+A+RA +    TRI++++PN  G+       Y T + LPG G DKYL I VH+Y P  F    G+++ +       AA+ +         + +   L   P++ GEFGVGR + A R+  +V+ YYRT+        +  +VWDD
Sbjct:  130 TAIDITKAMGPGFNLGNTFDNGANPTSITSIKSIIDIYTAAGMKHVRIPVSWMQSVSGSTLANTGTGKVDFNHSRFLEL-KAAIDYAISKGLYVVINTHHEHWLKDYYDGSATYNTKFSTLWSDIATYFKDY-SNKLIFDILNEPEGTMGQWGAEAGFSFPQPTSTTALNLTRQINKVGYDAIRATAGGNATRIIMVEPNGQGNQGMIEEVYPTKADLPGGGTDKYLVIQVHTYDPWAFCGETGADSAYPGATSIAAAINK---------VAVHSTLLGVPINYGEFGVGRTSAA-RNTSVVYEYYRTVKTTTLANNMSFSVWDD 442          
BLAST of jgi.p|Trimin1|163657 vs. uniprot
Match: A0A1V3RMW6_9FLAO (Cellulase domain-containing protein n=1 Tax=Flavobacterium sp. A45 TaxID=1945862 RepID=A0A1V3RMW6_9FLAO)

HSP 1 Score: 176 bits (447), Expect = 9.170e-48
Identity = 116/325 (35.69%), Postives = 166/325 (51.08%), Query Frame = 1
Query:   10 TAAELFATMGTGINLGNTLDNAQNNRDTEVIARRLTALRQKGFQHVRIPVTWQPM---------GCSKCRVNSPSFVALVEGAVNAAIALGFTVILNAHHEAWLTSY-DGSSGMNAAFADLWRKVALHFKSVPQDKLLFELLNEPQGTM------------CPCTPAAQQLTRTLNATGYNAVRAI---SPTRIVLIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAITVHSYGPPKFALPKGSNAYFLDMADPEAAVCQHVKKLIAELLKLRLALGSTPVHLGEFGVGRENLADRDAPIVHLYYRTIAKAARDACIPPTVWDD 909
            TAA++   MGTG NLGNT DN  N      I   +      G +HVRIPV+W               K    +P F+ L + A++ A++    V+LN HHE WL  Y DGS+  N  F+ +W  +A +FKS    KL+F++LNEP+GTM             P +  A  LTR +N  GY+A+RA    + TRI++++PN  G+       Y + + LPG G DKYLAI VH+Y P  F    G+++ +       AAV +         +    AL    ++ GEFGVGR + A R+  +V+ YY T+ K      +  +VWDD
Sbjct:  128 TAADIIKAMGTGFNLGNTFDNGINATSITSIKSIIDLYAAAGMKHVRIPVSWAQSVSGNTLANTSTGKVDFTNPRFLEL-KAAIDYALSKDLYVVLNTHHEHWLKDYYDGSATYNNKFSAIWTDIATYFKSY-SSKLIFDVLNEPEGTMGQWGAEAGFTFPLPTSATAISLTRQINKVGYDAIRATGGGNTTRIIMVEPNGQGNQGMIEEVYPSKAELPGLGNDKYLAIQVHTYDPWAFCGQTGADSAYPGATSIAAAVTK---------VATHSALIGVAINYGEFGVGRTSAA-RNTSVVYEYYSTMRKTMLANNMSASVWDD 440          
BLAST of jgi.p|Trimin1|163657 vs. uniprot
Match: UPI0019A94C7F (Glycoside hydrolase family 5 protein n=1 Tax=Flavobacterium sp. TaxID=239 RepID=UPI0019A94C7F)

HSP 1 Score: 174 bits (442), Expect = 5.000e-47
Identity = 116/325 (35.69%), Postives = 166/325 (51.08%), Query Frame = 1
Query:   10 TAAELFATMGTGINLGNTLDNAQNNRDTEVIARRLTALRQKGFQHVRIPVTWQPMGCSKCRVNSPS---------FVALVEGAVNAAIALGFTVILNAHHEAWLTSY-DGSSGMNAAFADLWRKVALHFKSVPQDKLLFELLNEPQGTM------------CPCTPAAQQLTRTLNATGYNAVRAI---SPTRIVLIQPNNLGDAWAARATYRTPSLLPGQGKDKYLAITVHSYGPPKFALPKGSNAYFLDMADPEAAVCQHVKKLIAELLKLRLALGSTPVHLGEFGVGRENLADRDAPIVHLYYRTIAKAARDACIPPTVWDD 909
            TAA++   MG G NLGNT DN  N      I   +      G +HVRIPV+W          N+ +         F+ L + A++ AI+ G  V++N+HHE WL  Y DGS+  N  F+ LW  +A ++KS   +KL+F++LNEP+GTM             P    A   TR +N  GY+A+RA    + TRI++I+PN  G+       Y T + LPG G DKYL I VH+Y P  F    GS+A +       +A+ +         +    AL   P++ GEFGVGR + A R+  +V+ YYRT+        +  +VWDD
Sbjct:  128 TAADITKAMGPGFNLGNTFDNGGNPTSITSIKSIIDIYAAAGMKHVRIPVSWIQSVSGSTLANTTTGKVDFTHSRFLEL-KAAIDYAISKGLYVVINSHHEHWLKDYYDGSATFNNKFSALWTDIATYYKSY-SNKLIFDILNEPEGTMGQWGAEAGFSFPLPTNATAINFTRQINKVGYDAIRATGGGNTTRIIMIEPNGQGNQGMIEEVYPTKAELPGLGNDKYLVIQVHTYDPWGFCGETGSDAAYPGATSIASAINK---------VATHSALIGVPINYGEFGVGRLSAA-RNTSVVYEYYRTVKATTLANNMSFSVWDD 440          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163657 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CFT8_9STRA2.400e-248100.00Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A836CL48_9STRA6.410e-22288.76Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A836CEX1_9STRA3.260e-9947.08Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A836CFX5_9STRA1.700e-7741.64Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835ZM96_9STRA1.560e-7240.00Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835Z601_9STRA2.700e-7138.87Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835Z688_9STRA1.000e-5038.59Family 5 glycoside hydrolase n=2 Tax=Tribonema min... [more]
A0A4P6YDL0_9FLAO4.880e-4835.38Glycoside hydrolase family 5 protein n=1 Tax=Flavo... [more]
A0A1V3RMW6_9FLAO9.170e-4835.69Cellulase domain-containing protein n=1 Tax=Flavob... [more]
UPI0019A94C7F5.000e-4735.69Glycoside hydrolase family 5 protein n=1 Tax=Flavo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_26contigContig_26:267717..268733 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|163657|e_gw1.26.37.1
CAZyGH5,GH9
BRITEko00000,ko00001,ko01000
KEGG ReactionR06200,R11307,R11308
KEGG Pathwayko00500,ko01100,map00500,map01100
KEGG koko:K01179
EC3.2.1.4
DescriptionCellulase (glycosyl hydrolase family 5)
COG categoryG
Max annot lvl976|Bacteroidetes
EggNOG OGsCOG2730@1|root,COG2730@2|Bacteria,4NK8X@976|Bacteroidetes,1IIH9@117743|Flavobacteriia
Evalue3.64e-51
Seed ortholog688270.Celal_3584
Hectar predicted targeting categoryother localisation
TranscriptId163979
TrackFilteredModels1
ProteinId163657
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163657gene_1834Tribonema minus UTEX_B_3156 geneContig_26 267717..268733 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1834_1exon_1834_1Tribonema minus UTEX_B_3156 exonContig_26 267717..268733 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1834CDS_1834Tribonema minus UTEX_B_3156 CDSContig_26 267717..268733 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163657Trimin1|163657|e_gw1.26.37.1Tribonema minus UTEX_B_3156 polypeptideContig_26 267717..268733 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1834 ID=mRNA_1834|Name=jgi.p|Trimin1|163657|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1017bp|location=Sequence derived from alignment at Contig_26:267717..268733- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCAGCGACAGCAGCAGAGCTCTTTGCCACGATGGGCACCGGCATCAA
CCTCGGAAACACTCTAGACAACGCTCAGAATAACCGAGACACAGAAGTCA
TTGCAAGGCGGCTCACAGCTTTAAGGCAAAAGGGATTTCAACACGTGCGT
ATACCAGTCACATGGCAGCCGATGGGCTGCAGCAAGTGTAGAGTCAACTC
GCCTTCATTTGTTGCGTTGGTCGAAGGTGCTGTCAATGCTGCCATTGCGC
TAGGGTTCACGGTGATCTTGAACGCTCACCACGAGGCTTGGCTCACTTCG
TATGATGGGTCAAGTGGAATGAATGCAGCATTTGCAGATCTGTGGCGCAA
AGTTGCGCTCCACTTCAAGAGCGTTCCCCAAGATAAGCTCTTGTTCGAAT
TGCTCAACGAGCCACAAGGTACCATGTGTCCTTGTACACCTGCTGCTCAA
CAGCTCACACGCACGCTCAATGCGACAGGGTACAACGCAGTGCGGGCCAT
CTCACCGACTCGGATCGTTCTCATACAGCCCAATAACCTGGGTGATGCGT
GGGCGGCGCGTGCCACCTATCGAACACCATCTCTCTTGCCTGGACAAGGA
AAAGACAAATACTTGGCCATCACTGTGCATTCATATGGCCCTCCCAAATT
TGCACTGCCTAAAGGTAGCAATGCATACTTTCTGGACATGGCTGATCCAG
AGGCTGCTGTGTGCCAGCACGTCAAGAAGCTCATCGCAGAGCTGCTGAAG
CTGAGACTCGCTCTGGGCAGCACGCCAGTGCACCTGGGTGAATTCGGTGT
CGGGCGTGAAAATTTGGCTGACAGGGATGCACCAATCGTTCACCTCTACT
ACCGCACAATCGCAAAGGCGGCTAGAGACGCATGCATTCCGCCCACCGTG
TGGGATGATGGTACCGGAAACGATTTTGAAATCACAAATTTCGACCGGAA
TGCAAATTGTGTAGATTTCACATTCGATTTGGCCGGCGATGTGTTAGGCA
CCACCGCAACGCCTTAA
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protein sequence of jgi.p|Trimin1|163657

>Trimin1|163657|e_gw1.26.37.1 ID=Trimin1|163657|e_gw1.26.37.1|Name=jgi.p|Trimin1|163657|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=339bp
MAATAAELFATMGTGINLGNTLDNAQNNRDTEVIARRLTALRQKGFQHVR
IPVTWQPMGCSKCRVNSPSFVALVEGAVNAAIALGFTVILNAHHEAWLTS
YDGSSGMNAAFADLWRKVALHFKSVPQDKLLFELLNEPQGTMCPCTPAAQ
QLTRTLNATGYNAVRAISPTRIVLIQPNNLGDAWAARATYRTPSLLPGQG
KDKYLAITVHSYGPPKFALPKGSNAYFLDMADPEAAVCQHVKKLIAELLK
LRLALGSTPVHLGEFGVGRENLADRDAPIVHLYYRTIAKAARDACIPPTV
WDDGTGNDFEITNFDRNANCVDFTFDLAGDVLGTTATP*
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mRNA from alignment at Contig_26:267717..268733-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1834 ID=mRNA_1834|Name=jgi.p|Trimin1|163657|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1017bp|location=Sequence derived from alignment at Contig_26:267717..268733- (Tribonema minus UTEX_B_3156 )
ATGGCAGCGACAGCAGCAGAGCTCTTTGCCACGATGGGCACCGGCATCAA CCTCGGAAACACTCTAGACAACGCTCAGAATAACCGAGACACAGAAGTCA TTGCAAGGCGGCTCACAGCTTTAAGGCAAAAGGGATTTCAACACGTGCGT ATACCAGTCACATGGCAGCCGATGGGCTGCAGCAAGTGTAGAGTCAACTC GCCTTCATTTGTTGCGTTGGTCGAAGGTGCTGTCAATGCTGCCATTGCGC TAGGGTTCACGGTGATCTTGAACGCTCACCACGAGGCTTGGCTCACTTCG TATGATGGGTCAAGTGGAATGAATGCAGCATTTGCAGATCTGTGGCGCAA AGTTGCGCTCCACTTCAAGAGCGTTCCCCAAGATAAGCTCTTGTTCGAAT TGCTCAACGAGCCACAAGGTACCATGTGTCCTTGTACACCTGCTGCTCAA CAGCTCACACGCACGCTCAATGCGACAGGGTACAACGCAGTGCGGGCCAT CTCACCGACTCGGATCGTTCTCATACAGCCCAATAACCTGGGTGATGCGT GGGCGGCGCGTGCCACCTATCGAACACCATCTCTCTTGCCTGGACAAGGA AAAGACAAATACTTGGCCATCACTGTGCATTCATATGGCCCTCCCAAATT TGCACTGCCTAAAGGTAGCAATGCATACTTTCTGGACATGGCTGATCCAG AGGCTGCTGTGTGCCAGCACGTCAAGAAGCTCATCGCAGAGCTGCTGAAG CTGAGACTCGCTCTGGGCAGCACGCCAGTGCACCTGGGTGAATTCGGTGT CGGGCGTGAAAATTTGGCTGACAGGGATGCACCAATCGTTCACCTCTACT ACCGCACAATCGCAAAGGCGGCTAGAGACGCATGCATTCCGCCCACCGTG TGGGATGATGGTACCGGAAACGATTTTGAAATCACAAATTTCGACCGGAA TGCAAATTGTGTAGATTTCACATTCGATTTGGCCGGCGATGTGTTAGGCA CCACCGCAACGCCTTAA
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Coding sequence (CDS) from alignment at Contig_26:267717..268733-

>mRNA_1834 ID=mRNA_1834|Name=jgi.p|Trimin1|163657|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1017bp|location=Sequence derived from alignment at Contig_26:267717..268733- (Tribonema minus UTEX_B_3156 )
ATGGCAGCGACAGCAGCAGAGCTCTTTGCCACGATGGGCACCGGCATCAA
CCTCGGAAACACTCTAGACAACGCTCAGAATAACCGAGACACAGAAGTCA
TTGCAAGGCGGCTCACAGCTTTAAGGCAAAAGGGATTTCAACACGTGCGT
ATACCAGTCACATGGCAGCCGATGGGCTGCAGCAAGTGTAGAGTCAACTC
GCCTTCATTTGTTGCGTTGGTCGAAGGTGCTGTCAATGCTGCCATTGCGC
TAGGGTTCACGGTGATCTTGAACGCTCACCACGAGGCTTGGCTCACTTCG
TATGATGGGTCAAGTGGAATGAATGCAGCATTTGCAGATCTGTGGCGCAA
AGTTGCGCTCCACTTCAAGAGCGTTCCCCAAGATAAGCTCTTGTTCGAAT
TGCTCAACGAGCCACAAGGTACCATGTGTCCTTGTACACCTGCTGCTCAA
CAGCTCACACGCACGCTCAATGCGACAGGGTACAACGCAGTGCGGGCCAT
CTCACCGACTCGGATCGTTCTCATACAGCCCAATAACCTGGGTGATGCGT
GGGCGGCGCGTGCCACCTATCGAACACCATCTCTCTTGCCTGGACAAGGA
AAAGACAAATACTTGGCCATCACTGTGCATTCATATGGCCCTCCCAAATT
TGCACTGCCTAAAGGTAGCAATGCATACTTTCTGGACATGGCTGATCCAG
AGGCTGCTGTGTGCCAGCACGTCAAGAAGCTCATCGCAGAGCTGCTGAAG
CTGAGACTCGCTCTGGGCAGCACGCCAGTGCACCTGGGTGAATTCGGTGT
CGGGCGTGAAAATTTGGCTGACAGGGATGCACCAATCGTTCACCTCTACT
ACCGCACAATCGCAAAGGCGGCTAGAGACGCATGCATTCCGCCCACCGTG
TGGGATGATGGTACCGGAAACGATTTTGAAATCACAAATTTCGACCGGAA
TGCAAATTGTGTAGATTTCACATTCGATTTGGCCGGCGATGTGTTAGGCA
CCACCGCAACGCCTTAA
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