mRNA_18136 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|150792
Unique NamemRNA_18136
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|150792 vs. uniprot
Match: A0A835Z926_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z926_9STRA)

HSP 1 Score: 474 bits (1220), Expect = 2.440e-169
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 1
Query:    1 SNGTVTLASGRRLDDGSVIRVLFAYTTPTRDRWGHSTIVSMIVGGVASANQALSNSGAGFKIVAAHIMHAQWSHDSSGHIVSLSALNYGEVPGIVAARKLYKADLVQMVIDNGEYCGYGNLMDTASSSFGKYAHSVIHGGCYAQLSHVHEIGHNLGARHDAADSTASTTWPYALGWRYCDDGKGAGPYFRTVMSYSCPGAARVPYFSSPNKFYQGLPTGNAGADNARVLRQ 693
            SNGTVTLASGRRLDDGSVIRVLFAYTTPTRDRWGHSTIVSMIVGGVASANQALSNSGAGFKIVAAHIMHAQWSHDSSGHIVSLSALNYGEVPGIVAARKLYKADLVQMVIDNGEYCGYGNLMDTASSSFGKYAHSVIHGGCYAQLSHVHEIGHNLGARHDAADSTASTTWPYALGWRYCDDGKGAGPYFRTVMSYSCPGAARVPYFSSPNKFYQGLPTGNAGADNARVLRQ
Sbjct:    1 SNGTVTLASGRRLDDGSVIRVLFAYTTPTRDRWGHSTIVSMIVGGVASANQALSNSGAGFKIVAAHIMHAQWSHDSSGHIVSLSALNYGEVPGIVAARKLYKADLVQMVIDNGEYCGYGNLMDTASSSFGKYAHSVIHGGCYAQLSHVHEIGHNLGARHDAADSTASTTWPYALGWRYCDDGKGAGPYFRTVMSYSCPGAARVPYFSSPNKFYQGLPTGNAGADNARVLRQ 231          
BLAST of jgi.p|Trimin1|150792 vs. uniprot
Match: A0A836CH47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH47_9STRA)

HSP 1 Score: 341 bits (874), Expect = 4.180e-115
Identity = 163/230 (70.87%), Postives = 193/230 (83.91%), Query Frame = 1
Query:    4 NGTVTLASGRRLDDGSVIRVLFAYTTPTRDRWGHSTIVSMIVGGVASANQALSNSGAGFKIVAAHIMHAQWSHDSSGHIVSLSALNYGEVPGIVAARKLYKADLVQMVIDNGEYCGYGNLMDTASSSFGKYAHSVIHGGCYAQLSHVHEIGHNLGARHDAADSTASTTWPYALGWRYCDDGKGAGPYFRTVMSYSCPGAARVPYFSSPNKFYQGLPTGNAGADNARVLRQ 693
            +G V L SGRRLDDGSVIRVLFAYTTPTRDRWG STI SMIVG +ASANQALSNSG GFKI AA IMH  W++D+ GH+ +L+AL+ GE+PGI AARKLYKADLVQ+VIDN +YCG+G+LM + SSSF +YA+SV++GGC+AQ SH+HEIGHN+GARHD  ++ AS TWPYA+G+RYC  G+   PYFR+VMSYSC GA RVPYFSSP  +YQG  TG  GADNARVLR+
Sbjct:   94 DGAVILPSGRRLDDGSVIRVLFAYTTPTRDRWGQSTIRSMIVGALASANQALSNSGVGFKIAAARIMHVNWNYDNEGHVAALNALSQGEMPGIAAARKLYKADLVQVVIDNAQYCGFGSLMQSPSSSFREYAYSVVYGGCFAQFSHIHEIGHNMGARHDVGNTDASATWPYAMGYRYCS-GEVDPPYFRSVMSYSCTGAMRVPYFSSPTVYYQGRQTGMQGADNARVLRE 322          
BLAST of jgi.p|Trimin1|150792 vs. uniprot
Match: A0A836C7N3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7N3_9STRA)

HSP 1 Score: 269 bits (688), Expect = 1.630e-83
Identity = 135/243 (55.56%), Postives = 172/243 (70.78%), Query Frame = 1
Query:    7 GTVTLASGRRLDDGSVIRVLFAYTTPTRDRWGHSTIVSMIVGGVASANQALSNSGAGFKIVAAHIMHAQWSHDSSGHIVSLSALNYGEVPGIVAARKLYKADLVQMVIDNGEYCG---------------YGNLMDTASSSFGKYAHSVIHGGCYAQLSHVHEIGHNLGARHDAADSTASTTWPYALGWRYCDDGKGAGPYFRTVMSYSCPGAARVPYFSSPNKFYQGLPTGNAGADNARVLR 690
            G V + SGRRLDDGS++RVLFAYT  +R RWG +T+ SMIVGGVASANQ LSNSG GFKI AA IM   ++    G + +L+ L+ G V G+ AAR+ YKADLVQ+VI+  +YCG               YGN+M + SS F  +AHSV++ GCY+  SH+HE+GHN+GA+HDAA+S   T W Y  G+RYC  G+ + P+FR+VMSY+C  A RVPYFSSPN +Y+G  TG AGADN RVL+
Sbjct:  364 GAVVMPSGRRLDDGSIVRVLFAYTPASRARWGAATLKSMIVGGVASANQVLSNSGLGFKIEAAAIMATTYTEPDGGFVAALNDLDDGNVTGVNAARETYKADLVQLVINTSDYCGSNCTNCSAVCAAYGRYGNIMTSTSSDFAPWAHSVVYNGCYSSYSHIHEMGHNMGAQHDAANSQDVTDWSYGEGYRYCS-GETSQPWFRSVMSYNCGAAPRVPYFSSPNVYYKGRATGTAGADNVRVLK 605          
BLAST of jgi.p|Trimin1|150792 vs. uniprot
Match: A0A836CMI7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMI7_9STRA)

HSP 1 Score: 260 bits (665), Expect = 1.150e-78
Identity = 128/229 (55.90%), Postives = 161/229 (70.31%), Query Frame = 1
Query:    7 GTVTLASGRRLDDGSVIRVLFAYTTPTRDRWGHSTIVSMIVGGVASANQALSNSGAGFKIVAAHIMHAQWSHDSSGHIVSLSALNYGEVPGIVAARKLYKADLVQMVIDNGEYCGYGNLMDTASSSFGKYAHSVIHGGCYAQLSHVHEIGHNLGARHDAADSTASTTWPYALGWRYCDDGKGAGPYFRTVMSYSCPGAARVPYFSSPNKFYQGLPTGNAGADNARVLRQ 693
            G V + SGRRLDDGS +RVL+ Y+   RDRW   TI S I  GVA+ANQAL+NSG  F++ AA IMH  +  D + H+ +L+ALN G + GI  AR  Y ADLVQMVI++ EYCGYGNL+ +ASSSF  Y  SV++  C    SH+HEIGHN+G +H+A +S  +T W Y +G+RYC+DG    PY+R+VMSY+C GA RVPYFSSP+  YQG  TG   ADN RVL Q
Sbjct:  229 GQVVMPSGRRLDDGSTVRVLWLYSNRVRDRWTDDTITSKIAAGVATANQALANSGVSFRVKAAAIMHVDY--DDTTHMEALAALNTGSIAGINTARDKYSADLVQMVIESSEYCGYGNLLYSASSSFAPYGFSVVYSDCIVSYSHIHEIGHNMGCQHNAENSGDATMWSYGVGYRYCNDGVSKSPYYRSVMSYACTGATRVPYFSSPDVEYQGRTTGLDTADNVRVLEQ 455          
BLAST of jgi.p|Trimin1|150792 vs. uniprot
Match: A0A835YK21_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK21_9STRA)

HSP 1 Score: 259 bits (661), Expect = 4.140e-77
Identity = 131/239 (54.81%), Postives = 164/239 (68.62%), Query Frame = 1
Query:    7 GTVTLASGRRLDDGSVIRVLFAYTTPTRDRWGHSTIVSMIVGGVASANQALSNSGAGFKIVAAHIMHAQWSHDSSGHIVSLSALNYGEVPG---------IVAARKLYKADLVQMVIDNGEYCGYGNLMDTASSSFGKYAHSVIHGGCYAQLSHVHEIGHNLGARHDAADSTASTTWPYALGWRYCDDGKGAGPYFRTVMSYSCPGAARVPYFSSPNKFYQGLPTGNAG-ADNARVLRQ 693
            G V + SGRRLDDGSV+RVL+ YT   RDRW  +TI S IV GV SANQAL NS AGF++ AA I++  +  D   H+ SLS L+Y  +P          +   R  Y+ADLVQM+I+  EYCGYGNL+ +ASSSF  Y +SV++  C A  SH+HEIGHN+G +H+  +S  +T WPY  G+RYC+DG    PYFRT+MSY+C GA RVPYFSSPN +YQG+ TG A  ADN RVL Q
Sbjct:  309 GAVLMPSGRRLDDGSVVRVLWLYTNRVRDRWTDATITSKIVSGVVSANQALINSNAGFQLEAAAIINIDY--DDVSHVQSLSDLSYSAIPXXXXXXXXXXVTFLRDFYRADLVQMIIEAPEYCGYGNLLSSASSSFASYGYSVVYSDCIASYSHIHEIGHNMGCQHNVENSGQTTVWPYGDGYRYCNDGVTQAPYFRTIMSYACTGATRVPYFSSPNIYYQGVATGTAATADNLRVLLQ 545          
BLAST of jgi.p|Trimin1|150792 vs. uniprot
Match: A0A835YS29_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS29_9STRA)

HSP 1 Score: 201 bits (511), Expect = 5.150e-56
Identity = 107/238 (44.96%), Postives = 146/238 (61.34%), Query Frame = 1
Query:    1 SNGTVTLASGRRLDDGSVIRVLFAYTTPTRDRWGHSTIVSMIVGGVASANQALSNSGAGFKIVAAHIMHAQWSHDSSGHIVSLSALNYGEVPGIVAARKLYKADLVQMVIDNGEYCGYGNLMDTASSSFGKYAHSVIHGGCYAQ--LSHVHEIGHNLGARHD----AADSTASTTWPYALGWRYCDDGKGAGPYFRTVMSYSCPG--AARVPYFSSPNKFYQGLPTGNAGADNARVLR 690
            S+GTV + SGRRLDDGS++ +++ Y T T  RWG S + SM+  GV SANQ L NSG GF+    ++M++ ++ +    +  ++ L  G VPG  AAR  Y ADLVQM+ ++  YCG G LM    + F KY HS +   C+    L+H HEIGHN+G  HD     A+  A + WPY+ G+RYC     + P FRTVM+YSC    A+R PY+SSPN ++ G PTG    DN R L+
Sbjct:  285 SDGTVIMPSGRRLDDGSIVTLMYVYGTYTTARWG-SQVPSMVAAGVTSANQVLVNSGIGFQFQLVNLMYSNYADNDM--LQGITDLANGVVPGAAAARNTYGADLVQMMTEDPNYCGIGWLMTGKDAWFEKYGHSAVLNDCFTPTGLTHAHEIGHNMGCHHDMGTDGANGAAGSLWPYSFGYRYC-----SAPNFRTVMAYSCTSGSASRAPYYSSPNVYFMGYPTGTIYEDNVRTLK 514          
BLAST of jgi.p|Trimin1|150792 vs. uniprot
Match: A0A835YSD2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSD2_9STRA)

HSP 1 Score: 199 bits (505), Expect = 4.770e-55
Identity = 107/251 (42.63%), Postives = 150/251 (59.76%), Query Frame = 1
Query:    1 SNGTVTLASGRRLDDGSVIRVLFAYTTPTRD---------------RWGHSTIVSMIVGGVASANQALSNSGAGFKIVAAHIMHAQWSHDSSGHIVSLSALNYGEVPGIVAARKLYKADLVQMVIDNGEYCGYGNLMDTASSSFGKYAHSVIHGGCYAQLSHVHEIGHNLGARHD----AADSTASTTWPYALGWRYCDDGKGAGPYFRTVMSYSCPG--AARVPYFSSPNKFYQGLPTGNAGADNARVLR 690
            S+GTV + SGRRLDDGS++ +++ Y T T                 +WG S + SM   GV SANQ L NSG GF+    ++M++ ++ ++     + + +  G VPG+ AAR  Y ADL+QM+ ++  YCG G LM   S SF KY +S +   C+  LSH+HEIGHN+G  HD     A++ A + WPY+ G+RYC     + P FRTVM+Y+C    A+R+PYFSSPN +Y G PTG    DN R L+
Sbjct:  314 SDGTVIMPSGRRLDDGSIVTLMYIYGTYTNAXXXXXXXXXXXXXXAKWG-SQVPSMAAAGVTSANQVLVNSGVGFQFQLVNLMYSNYADNNMDQ--ATTDMLAGTVPGVAAARNTYGADLIQMMTEDTAYCGLGWLMTDKSPSFEKYGNSAVFNDCFMNLSHIHEIGHNMGCHHDIGTDGANAAAGSLWPYSFGYRYC-----SAPNFRTVMAYACTSGSASRMPYFSSPNVYYMGYPTGTDIEDNVRTLK 556          
BLAST of jgi.p|Trimin1|150792 vs. uniprot
Match: A0A836C8G9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8G9_9STRA)

HSP 1 Score: 189 bits (480), Expect = 4.060e-52
Identity = 102/234 (43.59%), Postives = 147/234 (62.82%), Query Frame = 1
Query:   13 VTLASGRRLDDGSVIRVLFAYTTPTRDRWGHSTIVSMIVGGVASANQALSNSGAGFKIVAAHIMHAQWSHDSSGHIVSLSALNYGEVPGIVAARKLYKADLVQMVIDNGEYCGYGNLMDTASSSFGKYAHSVIHGGCY--AQLSHVHEIGHNLGARHDA----ADSTASTTWPYALGWRYCDDGKGAGPYFRTVMSYSC-PGAA-RVPYFSSPNKFYQGLPTGNAGADNARVLR 690
            V + SGRRLDDG+V+RV++ Y   +  RWG S I SM+   + SAN  LSNS AG ++  A ++++  +++ +    +L+A+  G VPG  AAR  Y ADL+QM+ ++  YCG G ++++A+++  KY +S +   C   +  +H+HEIGHNLGA HD     A S   + WPY+ G+RYC       P FRT+M+Y+C P  + R+PYFSSP   Y G PTG A  DNAR LR
Sbjct:  371 VVMPSGRRLDDGTVVRVMYIYGNASGSRWGGSQIYSMVAAAITSANLVLSNSNAGVQLELATLLYS--NYNDTDMYAALNAMVAGTVPGANAARDAYSADLMQMLTEDPRYCGLGWVLNSATNANSKYGNSAVQVLCLGSSNWAHIHEIGHNLGAHHDVSTDGASSATGSDWPYSFGYRYCST-----PNFRTIMAYTCNPNTSPRIPYFSSPLITYNGYPTGTATEDNARTLR 597          
BLAST of jgi.p|Trimin1|150792 vs. uniprot
Match: A0A835YTT5_9STRA (Chitin-binding type-1 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTT5_9STRA)

HSP 1 Score: 171 bits (433), Expect = 2.920e-48
Identity = 97/235 (41.28%), Postives = 137/235 (58.30%), Query Frame = 1
Query:    7 GTVTLASGRRLDDGSVIRVLFAYTTPTRDRWGHSTIVSMIVGGV-ASANQALSNSGAGFKIVAAHIMHAQW-SHDSSGHIVSLSALNYGEVPGIVAARKLYKADLVQMVIDNGEYCGYGNLMDTASSSFGKYAHSVIHGGCY--AQLSHVHEIGHNLGARHDAADSTASTTWPYALGWRYCDDGKGAGPYFRTVMSY---SCPGAARVPYFSSPNKFYQGLPTGNAGADNARVLR 690
            G+V + SGRRLD GSV+RVL+AYT       G +  V+ I+ G   SANQ L+NSG  F + AA+   +   S  S GH  +L+A     +P + +     K D+VQ+VIDNG YCG G +M +A++ F   A+S +H GC   + L+H+HE+GHN G  HD A +T +T WPY  G+R C          ++VM+Y   +CPG   VP FS+P + + G   G+A  DN RV +
Sbjct:   60 GSVLMPSGRRLDAGSVVRVLWAYTPRVETLAGGAARVATIINGAFTSANQVLTNSGLPFILEAAYFKVSYTESTASDGHSGALTAAATNVIPSLWSVHDSGKYDIVQLVIDNGYYCGLGYVMSSATTGFAPSAYSTVHWGCMDTSNLAHIHEMGHNFGGLHDRASNTLTTAWPYGYGYRSCPSA--TAERVKSVMAYWSPNCPGQYNVPVFSTPTRAWSGYAMGDANTDNVRVFK 292          
BLAST of jgi.p|Trimin1|150792 vs. uniprot
Match: A0A835YJ94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ94_9STRA)

HSP 1 Score: 169 bits (428), Expect = 3.920e-45
Identity = 98/231 (42.42%), Postives = 138/231 (59.74%), Query Frame = 1
Query:    1 SNGTVTLASGRRLDDGSVIRVLFAYTTPTRDRWGHSTIVSMIVGGVASANQALSNSGAGFKIVAAHIMHAQWSHDSSGHIVSLSALNYGEVPGIVAARKLYKADLVQMVIDNGEYCGYGNLMDTASSSFGKYAHSVIHGGCYAQLSHVHEIGHNLGARHDAA----DSTASTTWPYALGWRYCDDGKGAGPYFRTVMSYSCPGAARVPYFSSPNKFYQGLPTGNAGADNAR 681
            + G V + SGRRLDDG+ +RVL+AY    ++    S I SM+  GVASANQALSNS AGF+I  A +M + ++    G I++   L  G +  +   R+   ADLVQ +  + +YCGYG ++   +++  K   S +   C+A  S +HEIGHN+G  HD+A    D T+S    YA G+R C  G  + PYFRTVM+Y+C  A RV YFSSP+  Y     G + A+NA+
Sbjct:  194 AEGAVMMPSGRRLDDGTKVRVLWAYNNVVKNMT-ESAIASMVAAGVASANQALSNSHAGFQIELAGLMRSTYNDVDQGSIIA--NLRDGVIADVKQKREEVAADLVQWISHDKKYCGYGFVLYNLTTADSKRGVSSVLFTCFAGYSQIHEIGHNMGCDHDSANVGGDHTSSQWASYAYGYRRCGGGSTSAPYFRTVMAYTCSRAPRVAYFSSPDVKYSSTAVGTSTANNAK 421          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|150792 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z926_9STRA2.440e-169100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CH47_9STRA4.180e-11570.87Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C7N3_9STRA1.630e-8355.56Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CMI7_9STRA1.150e-7855.90Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YK21_9STRA4.140e-7754.81Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YS29_9STRA5.150e-5644.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YSD2_9STRA4.770e-5542.63Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836C8G9_9STRA4.060e-5243.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YTT5_9STRA2.920e-4841.28Chitin-binding type-1 domain-containing protein n=... [more]
A0A835YJ94_9STRA3.920e-4542.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_244contigContig_244:76675..77367 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|150792|gw1.244.9.1
DescriptionMetallo-peptidase family M12B Reprolysin-like
COG categoryS
Max annot lvl28221|Deltaproteobacteria
EggNOG OGsCOG3291@1|root,COG3291@2|Bacteria,1PHGX@1224|Proteobacteria,437VV@68525|delta/epsilon subdivisions,2X1BB@28221|Deltaproteobacteria,2MEPR@213115|Desulfovibrionales
Evalue3.99e-29
Seed ortholog1304872.JAGC01000003_gene3276
Hectar predicted targeting categoryother localisation
TranscriptId151114
TrackFilteredModels1
ProteinId150792
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|150792gene_18136Tribonema minus UTEX_B_3156 geneContig_244 76675..77367 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18136_1exon_18136_1Tribonema minus UTEX_B_3156 exonContig_244 76675..77367 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18136CDS_18136Tribonema minus UTEX_B_3156 CDSContig_244 76675..77367 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|150792Trimin1|150792|gw1.244.9.1Tribonema minus UTEX_B_3156 polypeptideContig_244 76675..77367 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18136 ID=mRNA_18136|Name=jgi.p|Trimin1|150792|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=693bp|location=Sequence derived from alignment at Contig_244:76675..77367- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TCCAACGGCACTGTCACGCTGGCGAGTGGCCGCCGCCTGGACGACGGCAG
CGTGATCCGTGTGCTCTTTGCGTACACGACGCCTACTCGTGACAGGTGGG
GACATAGTACTATCGTGAGCATGATAGTGGGGGGAGTGGCGAGCGCGAAT
CAAGCGCTGTCAAACAGCGGCGCGGGCTTCAAGATAGTCGCGGCGCACAT
CATGCACGCCCAGTGGAGCCACGATTCTAGTGGACACATAGTGTCTCTTT
CGGCATTGAATTACGGTGAAGTGCCAGGCATCGTCGCGGCGCGCAAGCTC
TACAAGGCAGACCTCGTGCAGATGGTGATTGACAATGGCGAGTACTGCGG
GTACGGCAACCTGATGGACACGGCTTCATCCTCATTTGGCAAGTATGCGC
ATTCAGTAATCCATGGAGGCTGTTACGCTCAACTGTCACATGTGCACGAG
ATCGGGCACAATCTGGGAGCACGCCACGACGCCGCCGATTCTACGGCATC
AACAACATGGCCATACGCGCTAGGGTGGCGGTACTGTGACGACGGGAAAG
GAGCAGGACCATACTTCAGGACTGTCATGTCGTACTCCTGCCCTGGTGCT
GCACGCGTACCTTACTTCTCAAGCCCCAACAAATTCTATCAAGGCTTGCC
CACCGGCAACGCAGGGGCCGATAATGCGAGGGTGCTGCGGCAA
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protein sequence of jgi.p|Trimin1|150792

>Trimin1|150792|gw1.244.9.1 ID=Trimin1|150792|gw1.244.9.1|Name=jgi.p|Trimin1|150792|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=231bp
SNGTVTLASGRRLDDGSVIRVLFAYTTPTRDRWGHSTIVSMIVGGVASAN
QALSNSGAGFKIVAAHIMHAQWSHDSSGHIVSLSALNYGEVPGIVAARKL
YKADLVQMVIDNGEYCGYGNLMDTASSSFGKYAHSVIHGGCYAQLSHVHE
IGHNLGARHDAADSTASTTWPYALGWRYCDDGKGAGPYFRTVMSYSCPGA
ARVPYFSSPNKFYQGLPTGNAGADNARVLRQ
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mRNA from alignment at Contig_244:76675..77367-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18136 ID=mRNA_18136|Name=jgi.p|Trimin1|150792|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=693bp|location=Sequence derived from alignment at Contig_244:76675..77367- (Tribonema minus UTEX_B_3156 )
TCCAACGGCACTGTCACGCTGGCGAGTGGCCGCCGCCTGGACGACGGCAG CGTGATCCGTGTGCTCTTTGCGTACACGACGCCTACTCGTGACAGGTGGG GACATAGTACTATCGTGAGCATGATAGTGGGGGGAGTGGCGAGCGCGAAT CAAGCGCTGTCAAACAGCGGCGCGGGCTTCAAGATAGTCGCGGCGCACAT CATGCACGCCCAGTGGAGCCACGATTCTAGTGGACACATAGTGTCTCTTT CGGCATTGAATTACGGTGAAGTGCCAGGCATCGTCGCGGCGCGCAAGCTC TACAAGGCAGACCTCGTGCAGATGGTGATTGACAATGGCGAGTACTGCGG GTACGGCAACCTGATGGACACGGCTTCATCCTCATTTGGCAAGTATGCGC ATTCAGTAATCCATGGAGGCTGTTACGCTCAACTGTCACATGTGCACGAG ATCGGGCACAATCTGGGAGCACGCCACGACGCCGCCGATTCTACGGCATC AACAACATGGCCATACGCGCTAGGGTGGCGGTACTGTGACGACGGGAAAG GAGCAGGACCATACTTCAGGACTGTCATGTCGTACTCCTGCCCTGGTGCT GCACGCGTACCTTACTTCTCAAGCCCCAACAAATTCTATCAAGGCTTGCC CACCGGCAACGCAGGGGCCGATAATGCGAGGGTGCTGCGGCAA
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Coding sequence (CDS) from alignment at Contig_244:76675..77367-

>mRNA_18136 ID=mRNA_18136|Name=jgi.p|Trimin1|150792|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=693bp|location=Sequence derived from alignment at Contig_244:76675..77367- (Tribonema minus UTEX_B_3156 )
TCCAACGGCACTGTCACGCTGGCGAGTGGCCGCCGCCTGGACGACGGCAG
CGTGATCCGTGTGCTCTTTGCGTACACGACGCCTACTCGTGACAGGTGGG
GACATAGTACTATCGTGAGCATGATAGTGGGGGGAGTGGCGAGCGCGAAT
CAAGCGCTGTCAAACAGCGGCGCGGGCTTCAAGATAGTCGCGGCGCACAT
CATGCACGCCCAGTGGAGCCACGATTCTAGTGGACACATAGTGTCTCTTT
CGGCATTGAATTACGGTGAAGTGCCAGGCATCGTCGCGGCGCGCAAGCTC
TACAAGGCAGACCTCGTGCAGATGGTGATTGACAATGGCGAGTACTGCGG
GTACGGCAACCTGATGGACACGGCTTCATCCTCATTTGGCAAGTATGCGC
ATTCAGTAATCCATGGAGGCTGTTACGCTCAACTGTCACATGTGCACGAG
ATCGGGCACAATCTGGGAGCACGCCACGACGCCGCCGATTCTACGGCATC
AACAACATGGCCATACGCGCTAGGGTGGCGGTACTGTGACGACGGGAAAG
GAGCAGGACCATACTTCAGGACTGTCATGTCGTACTCCTGCCCTGGTGCT
GCACGCGTACCTTACTTCTCAAGCCCCAACAAATTCTATCAAGGCTTGCC
CACCGGCAACGCAGGGGCCGATAATGCGAGGGTGCTGCGGCAA
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