mRNA_1796 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|163552
Unique NamemRNA_1796
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|163552 vs. uniprot
Match: A0A835YYX5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYX5_9STRA)

HSP 1 Score: 1543 bits (3994), Expect = 0.000e+0
Identity = 775/775 (100.00%), Postives = 775/775 (100.00%), Query Frame = 1
Query:    1 MGSTYQAEAERLQDAFIDVYIRDHPFPEQYKRDFILRTSDVFTKQYEVSVTAHVVKSFTSRIQDHLMCYLERLAWDRRRDDHFAYVIKTGAKLLQRAGAVQDDATAAAMIEDFLERPRGADGQQRLHSDWRAAMGSGLTYIRNRLQPFRVAPPAGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRVLQMEAYFRRENEQYRVAKEVLWTSINNDQPYLAKVMTKAEAQKQLPAFRTIEPPEWVMEVGDGDLTQEQKVQWCGLQRRISDIRTALLEARRTPGTMFPPKRFTLLPVAELHPMMLPLDDRIITSVIELALDKIQPQGLSSRQIRRDWKARLTGDMTERGWWLCMFNLHGKVRLRTPRSAERGGEANMKPLGRKGKMAWGGLRCLWGQEWTFTEDLSEYGHKAPPWFVNNITTDGLQVNVTLATKRVETVIPGVAELIEKGYTSIKDVYEADTHTRGLFGSAAKISDQLISMLNEKDRRCFIEAVGVDSGQKLLYTAAAARISSDTSAEDFKKIQPAFRSASDHKFLSLAKARRMFEGERRRDNSAYSTAISQLSEVSMRTPGGTAAYTDTLHSHFITLAEEKLSWKRRCKSFDAKRAKMREISRMAVQIAGRSAEASALRKIGPEPKEREALLTSMRDNLAGDRRTWTRVVFFGNALFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDVNASVNIAICGINMLLGMARPPHLCRAAGTEEEA 2325
            MGSTYQAEAERLQDAFIDVYIRDHPFPEQYKRDFILRTSDVFTKQYEVSVTAHVVKSFTSRIQDHLMCYLERLAWDRRRDDHFAYVIKTGAKLLQRAGAVQDDATAAAMIEDFLERPRGADGQQRLHSDWRAAMGSGLTYIRNRLQPFRVAPPAGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRVLQMEAYFRRENEQYRVAKEVLWTSINNDQPYLAKVMTKAEAQKQLPAFRTIEPPEWVMEVGDGDLTQEQKVQWCGLQRRISDIRTALLEARRTPGTMFPPKRFTLLPVAELHPMMLPLDDRIITSVIELALDKIQPQGLSSRQIRRDWKARLTGDMTERGWWLCMFNLHGKVRLRTPRSAERGGEANMKPLGRKGKMAWGGLRCLWGQEWTFTEDLSEYGHKAPPWFVNNITTDGLQVNVTLATKRVETVIPGVAELIEKGYTSIKDVYEADTHTRGLFGSAAKISDQLISMLNEKDRRCFIEAVGVDSGQKLLYTAAAARISSDTSAEDFKKIQPAFRSASDHKFLSLAKARRMFEGERRRDNSAYSTAISQLSEVSMRTPGGTAAYTDTLHSHFITLAEEKLSWKRRCKSFDAKRAKMREISRMAVQIAGRSAEASALRKIGPEPKEREALLTSMRDNLAGDRRTWTRVVFFGNALFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDVNASVNIAICGINMLLGMARPPHLCRAAGTEEEA
Sbjct:    1 MGSTYQAEAERLQDAFIDVYIRDHPFPEQYKRDFILRTSDVFTKQYEVSVTAHVVKSFTSRIQDHLMCYLERLAWDRRRDDHFAYVIKTGAKLLQRAGAVQDDATAAAMIEDFLERPRGADGQQRLHSDWRAAMGSGLTYIRNRLQPFRVAPPAGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRVLQMEAYFRRENEQYRVAKEVLWTSINNDQPYLAKVMTKAEAQKQLPAFRTIEPPEWVMEVGDGDLTQEQKVQWCGLQRRISDIRTALLEARRTPGTMFPPKRFTLLPVAELHPMMLPLDDRIITSVIELALDKIQPQGLSSRQIRRDWKARLTGDMTERGWWLCMFNLHGKVRLRTPRSAERGGEANMKPLGRKGKMAWGGLRCLWGQEWTFTEDLSEYGHKAPPWFVNNITTDGLQVNVTLATKRVETVIPGVAELIEKGYTSIKDVYEADTHTRGLFGSAAKISDQLISMLNEKDRRCFIEAVGVDSGQKLLYTAAAARISSDTSAEDFKKIQPAFRSASDHKFLSLAKARRMFEGERRRDNSAYSTAISQLSEVSMRTPGGTAAYTDTLHSHFITLAEEKLSWKRRCKSFDAKRAKMREISRMAVQIAGRSAEASALRKIGPEPKEREALLTSMRDNLAGDRRTWTRVVFFGNALFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDVNASVNIAICGINMLLGMARPPHLCRAAGTEEEA 775          
BLAST of jgi.p|Trimin1|163552 vs. uniprot
Match: A0A835YYB9_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYB9_9STRA)

HSP 1 Score: 1357 bits (3511), Expect = 0.000e+0
Identity = 679/779 (87.16%), Postives = 715/779 (91.78%), Query Frame = 1
Query:    1 MGSTYQAEAERLQDAFIDVYIRDHPFPEQYKRDFILRTSDVFTKQYEVSVTAHVVKSFTSRIQDHLMCYLERLAWDRRRDDHFAYVIKTGAKLLQRAGAVQDDATAAAMIEDFLERPRGADGQQRLHSDWRAAMGSGLTYIRNRLQPFRVAPPAGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRVLQMEAYFRRENEQYRVAKEVLWTSINNDQPYLAKVMTKAEAQKQLPAFRTIEPPEWVMEVGDGDLTQEQKVQWCGLQRRISDIRTALLEARRTPGTMFPPKRFTLLPVAELHPMMLPLDDRI--ITSVIELALD--KIQPQGLSSRQIRRDWKARLTGDMTERGWWLCMFNLHGKVRLRTPRSAERGGEANMKPLGRKGKMAWGGLRCLWGQEWTFTEDLSEYGHKAPPWFVNNITTDGLQVNVTLATKRVETVIPGVAELIEKGYTSIKDVYEADTHTRGLFGSAAKISDQLISMLNEKDRRCFIEAVGVDSGQKLLYTAAAARISSDTSAEDFKKIQPAFRSASDHKFLSLAKARRMFEGERRRDNSAYSTAISQLSEVSMRTPGGTAAYTDTLHSHFITLAEEKLSWKRRCKSFDAKRAKMREISRMAVQIAGRSAEASALRKIGPEPKEREALLTSMRDNLAGDRRTWTRVVFFGNALFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDVNASVNIAICGINMLLGMARPPHLCRAAGTEEEA 2325
            +G TYQA+AERLQD FID YIRDHPFPEQYKRDFILRTSDVFTKQYEVSVTAHVVKSFTSRIQDHLMCYLERLAW RRRD+HFAYVIKTGAKLLQRA AVQDDA AAAM+E FL RPRG+DGQQ+LH DW AAMGSGLTYIRNRLQPFRVAPP GFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRVL  EA FR E+EQYRVAKE+LWTSINNDQPYLAKVMTKAEAQKQLPAFRTIEPP WVME GDGDLTQEQKVQWCGLQRR+SDIRTALLEARRTPGTMFPPKRFTLLPVAEL PMMLPLDDRI  ++       +   +Q +G+ SRQ+R+DWKARLTGDMTERGWWLCM NLH KV +R PR AER GEA MKPLGRKGK+AWGG+RCLWGQ+WT   DLSEYGHKAPPWFVNNITTDGLQVNVTLATKRV  VIPGVAELIEKGY SIKDVY+ADTHTRGLFGSA K+SDQ+IS LN+KDRRCFIEAVGVDSGQKLLYTAAAAR+SSDTS EDFKKIQPAFRSASDHKFLSL+KA R FEGERRRDN+ YS AISQLS VSMRTPGG AAYT+ LHSHFI +A+EKLSW+RR KSFDAKRAKMREISRMAVQIAGRSAEA+ALRKIGPEP+EREALLT MRDNLAGDRRTWTRVVFFGNA FGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRD+NASVNIAICGINMLLG  RPPHLCR  G EE+A
Sbjct:    2 IGGTYQADAERLQDDFIDAYIRDHPFPEQYKRDFILRTSDVFTKQYEVSVTAHVVKSFTSRIQDHLMCYLERLAWSRRRDEHFAYVIKTGAKLLQRAAAVQDDAAAAAMVEAFLVRPRGSDGQQQLHEDWWAAMGSGLTYIRNRLQPFRVAPPEGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRVLHTEAAFRSEDEQYRVAKELLWTSINNDQPYLAKVMTKAEAQKQLPAFRTIEPPAWVMENGDGDLTQEQKVQWCGLQRRVSDIRTALLEARRTPGTMFPPKRFTLLPVAELQPMMLPLDDRIDFLSDARGTRAEWRALQQEGIRSRQVRKDWKARLTGDMTERGWWLCMLNLHDKVGVRVPRGAERSGEARMKPLGRKGKLAWGGIRCLWGQKWTIEGDLSEYGHKAPPWFVNNITTDGLQVNVTLATKRVTAVIPGVAELIEKGYASIKDVYKADTHTRGLFGSAEKMSDQVISALNKKDRRCFIEAVGVDSGQKLLYTAAAARVSSDTSPEDFKKIQPAFRSASDHKFLSLSKAWRKFEGERRRDNTGYSDAISQLSSVSMRTPGGAAAYTNMLHSHFIVMADEKLSWERRRKSFDAKRAKMREISRMAVQIAGRSAEAAALRKIGPEPEEREALLTRMRDNLAGDRRTWTRVVFFGNAQFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDINASVNIAICGINMLLGRTRPPHLCRGVGEEEDA 780          
BLAST of jgi.p|Trimin1|163552 vs. uniprot
Match: A0A836CFJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFJ9_9STRA)

HSP 1 Score: 1155 bits (2987), Expect = 0.000e+0
Identity = 584/695 (84.03%), Postives = 619/695 (89.06%), Query Frame = 1
Query:    1 MGSTYQAEAERLQDAFIDVYIRDHPFPEQYKRDFILRTSDVFTKQYEVSVTAHVVKSFTSRIQDHLMCYLERLAWDRRRDDHFAYVIKTGAKLLQRAGAVQDDATAAAMIEDFLERPRGADGQQRLHSDWRAAMGSGLTYIRNRLQPFRVAPPAGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRVLQMEAYFRRENEQYRVAKEVLWTSINNDQPYLAKVMTKAEAQKQLPAFRTIEPPEWVMEVGDGDLTQEQKVQWCGLQRRISDIRTALLEARRTPGTMFPPKRFTLLPVAELHPMMLPLDDRIITSVIELALDKIQP--------------------------QGLSSRQIRRDWKARLTGDMTERGWWLCMFNLHGKVRLRTPRSAERGGEANMKPLGRKGKMAWGGLRCLWGQEWTFTEDLSEYGHKAPPWFVNNITTDGLQVNVTLATKRVETVIPGVAELIEKGYTSIKDVYEADTHTRGLFGSAAKISDQLISMLNEKDRRCFIEAVGVDSGQKLLYTAAAARISSDTSAEDFKKIQPAFRSASDHKFLSLAKARRMFEGERRRDNSAYSTAISQLSEVSMRTPGGTAAYTDTLHSHFITLAEEKLSWKRRCKSFDAKRAKMREISRMAVQIAGRSAEASALRKIGPEPKEREALLTSMRDNLAGDRRTWTRVVFFGNALFG 2007
            +G TYQA+AERLQD FID YIRDHPFPEQYKRDFILRTSDVFTKQYEVSVTAHVVKSFTSRIQDHLMCY+ERLAW R  D+HFAYVIKTGAKLLQRAGAVQDDATAAAM+E FL RPRG+DGQQ+LH DWRAAMGSGLTYIRNRLQPFRVAPP GFRG QVEDGADEDEDRVDEMGTFFKNIYRDKPRVL  EA FR E+EQYRVAKE+LWTSIN+DQPYLAKVMTKAEAQKQLPAFRTIEPP WVME GDGDLT+EQKVQWCGLQRRISDIRTALL+ARRTPGTMFPPKRFTLLPV ELHPMMLPLDDRI+TS++ LALDKIQP                          +G+ S Q+R+DWK RLTGDMTERGWWLCM NLH KVR+R PR AER GEA MKPLGRK K+AWGG+RCLWGQ+WT  EDLSE+  + PPWFVNNITTDGLQVNVTLATKRVETVIPGVAELIEKGYTSIKDVY+ADTHTRGLFGSAAKISDQLIS LN KDRRCFIEA GVD+GQ LLYTAAAARISSDTS EDFKKIQPAFRSASDHKFLSL+KA R FEGERRRDN+ YS AISQLS VSMRTPGG AAYT+TLHSHFIT+AEEKLSW+RR KSFDA RAKMR+ISRMAVQIAGRSAEA+ALRK GPEP+EREALLT MRDNLAGDRRTWTRVVFFGNA FG
Sbjct:  117 IGGTYQADAERLQDDFIDGYIRDHPFPEQYKRDFILRTSDVFTKQYEVSVTAHVVKSFTSRIQDHLMCYMERLAWSRHCDEHFAYVIKTGAKLLQRAGAVQDDATAAAMVEAFLVRPRGSDGQQQLHEDWRAAMGSGLTYIRNRLQPFRVAPPEGFRGGQVEDGADEDEDRVDEMGTFFKNIYRDKPRVLHTEAAFRSEDEQYRVAKELLWTSINSDQPYLAKVMTKAEAQKQLPAFRTIEPPAWVMENGDGDLTEEQKVQWCGLQRRISDIRTALLDARRTPGTMFPPKRFTLLPVVELHPMMLPLDDRIVTSIVGLALDKIQPVVHVPKLKDFLSAERGTRAEWRALQQEGVHSCQVRKDWKTRLTGDMTERGWWLCMLNLHDKVRVRVPRGAERSGEARMKPLGRKLKLAWGGIRCLWGQQWTIEEDLSEHADRGPPWFVNNITTDGLQVNVTLATKRVETVIPGVAELIEKGYTSIKDVYKADTHTRGLFGSAAKISDQLISALNAKDRRCFIEATGVDAGQILLYTAAAARISSDTSPEDFKKIQPAFRSASDHKFLSLSKAWRKFEGERRRDNTGYSDAISQLSGVSMRTPGGAAAYTNTLHSHFITMAEEKLSWERRRKSFDANRAKMRDISRMAVQIAGRSAEAAALRKFGPEPEEREALLTRMRDNLAGDRRTWTRVVFFGNAQFG 811          
BLAST of jgi.p|Trimin1|163552 vs. uniprot
Match: A0A835Z394_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z394_9STRA)

HSP 1 Score: 1052 bits (2720), Expect = 0.000e+0
Identity = 533/772 (69.04%), Postives = 622/772 (80.57%), Query Frame = 1
Query:   85 QYKRDFILRTSDVFTKQYEVSVTAHVVKSFTSRIQDHLMCYLERLAWDRRRDDHFAYVIKTGAKLLQRAGAVQDDATAAAMIEDFLERPRGADGQQRLHSDWRAAMGSGLTYIRNRLQPFRVAPPAGFRGAQVEDGADEDE-DRVDEMGTFFKNIYRDKPRVLQMEAYFRRENEQYRVAKEVLWTSINNDQPYLAKVMTKAEAQKQLPAFRTIEPPEWVMEVGDGDLTQEQKVQWCGLQRRISDIRTALLEARRTPGTMFPPKRFTLLPVAELHPMMLPLDDRIITSVIELALDKIQP--------------------------QGLSSRQIRRDWKARLTGDMTERGWWLCMFNLHGKVRLRTPRSAERGGEANMKPLGRKGKMAWGGLRCLWGQEWTFTEDLSEYGHKAPPWFVNNITTDGLQVNVTLATKRVETVIPGVAELIEKGYTSIKDVYEADTHTRGLFGSAAKISDQLISMLNEKDRRCFIEAVGVDSGQKLLYTAAAARISSDTSAEDFKKIQPAFRSASDHKFLSLAKARRMFEGERRRDNSAYSTAISQLSEVSMRTPGGTAAYTDTLHSHFITLAEEKLSWKRRCKSFDAKRAKMREISRMAVQIAGRSAEASALRKIGPEPKEREALLTSMRDNLAGDRRTWTRVVFFGNALFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDVNASVNIAICGINMLLGMARPPHLCRAAGTEE 2319
            +YKRDFILRTSDVFTKQY VSVTAHV+KSFT RIQDHLMCYLERLAW+RR  DHF+YVIKTGAKLLQRAGAVQ+D TA  M+E+F+ RPRG +G QRLH DWR AM + L Y+R+RL PFRV PP GF   QV+D       +++DEMG FFKNIYR+K  VL+ EA FR E+EQ+R+AKE LWTSINNDQPYL +VMTK +A+KQLPAFR IEPP W+ + GDG L+ +QKV+W  L RRIS  R  ++++RRTPGT+FPPKRFTLLP+AELHPMMLPLD RI+TS++ LALD IQP                          + L SR +RR+WKARL G M + GWWLCMFNLH KVRLR PR AE   +   KPLGRKGK AWGG+RCLWG  WT  +DLS++G+K PPWFVNNITTDGLQVNVTLATK V+ VIPGVA+L++KGYTSIK+VY+   HTRGLFGSAAK+S +L+S +NEKD RCF+E VGVD GQKLLY AAAAR++S++SAEDFK I+ A RSASDH+FLSL+KA   F+ ERRRDN +Y TAI++LS VSMRTPGGTAAY +TLH++F  + EEKLSW RRCKSFDAKRAKMREI+RMA +I G+S+EA+ALRK+GPE +ER ALL+ MRD LAG+ RTWTRV FFGNA FGHGSRGPLPRKALIRAIALLVPVVLMDEFRTS  CCGCG NLVQV+ SRV++C SCTPE  N +CSVRFIDRDVNASVNI +CGI MLLGM+RP HLCR A  EE
Sbjct:   46 EYKRDFILRTSDVFTKQYGVSVTAHVIKSFTLRIQDHLMCYLERLAWERRNGDHFSYVIKTGAKLLQRAGAVQEDDTAINMVEEFIVRPRGREGDQRLHEDWRGAMETALKYVRDRLSPFRVIPPGGFGRVQVDDXXXXXXXEQLDEMGAFFKNIYRNKSLVLETEAAFRSEDEQFRLAKEGLWTSINNDQPYLPQVMTKEDARKQLPAFRDIEPPAWIQD-GDGPLSTDQKVEWGVLVRRISATRRTMVDSRRTPGTLFPPKRFTLLPMAELHPMMLPLDSRIVTSIVALALDNIQPSLDIPTKKHYVETGMGTSQEWKILQQKQLRSRIVRREWKARLEGGMMDSGWWLCMFNLHEKVRLRMPRRAEVNWKP-AKPLGRKGKTAWGGIRCLWGTGWTIEDDLSKHGNKKPPWFVNNITTDGLQVNVTLATKVVDPVIPGVADLVKKGYTSIKEVYDPAIHTRGLFGSAAKMSGELLSAVNEKDPRCFVEIVGVDPGQKLLYKAAAARVTSNSSAEDFKNIETASRSASDHRFLSLSKAYTNFDKERRRDNMSYRTAIAELSGVSMRTPGGTAAYANTLHTNFKAMTEEKLSWGRRCKSFDAKRAKMREIARMAREIGGKSSEAAALRKVGPESEERAALLSRMRDRLAGNHRTWTRVAFFGNAQFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSMTCCGCGMNLVQVDSSRVYQCASCTPESVNQNCSVRFIDRDVNASVNIGMCGIRMLLGMSRPLHLCRTARGEE 815          
BLAST of jgi.p|Trimin1|163552 vs. uniprot
Match: A0A835ZC03_9STRA (OrfB_Zn_ribbon domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC03_9STRA)

HSP 1 Score: 670 bits (1728), Expect = 2.840e-234
Identity = 352/499 (70.54%), Postives = 373/499 (74.75%), Query Frame = 1
Query:  907 MMLPLDDRIITSVIELALDKIQP--------------------------QGLSSRQIRRDWKARLTGDMTERGWWLCMFNLHGKVRLRTPRSAERGGEANMKPLGRKGKMAWGGLRCLWGQEWTFTEDLSEYGHKAPPWFVNNITTDGLQVNVTLATKRVETVIPGVAELIEKGYTSIKDVYEADTHTRGLFGSAAKISDQLISMLNEKDRRCFIEAVGVDSGQKLLYTAAAARISSDTSAEDFKKIQPAFRSASDHKFLSLAKARRMFEGERRRDNSAYSTAISQLSEVSMRTPGGTAAYTDTLHSHFITLAEEKLSWKRRCKSFDAKRAKMREISRMAVQIAGRSAEASALRKIGPEPKEREALLTSMRDNLAGDRRTWTRVVFFGNALFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDVNASVNIAICGINMLLGMARPPHLCRAAGTEEEA 2325
            MMLPLDDRI+TSVIELALD IQP                          +G+ SRQ+R+DWK RLTGDMTERGWWLCM NLH KVR+R PR AER GEA MKPLGRKGK+AWGG+R LWGQ WT   DL EYGHKAPPW VNNITTDGLQVNVTLATKRVETVIPGVAELIEKGYTSI DVY+ADTHTRGLFGSA K+SDQ+IS LN+KDRRCFIEAVGVDSGQKLLYTAAAARISSDTS+E+FKKIQPAFRSASDHKFLSL+KA R FEGE             +  +      GGTAA                                                   ALRKIGPEP+EREALLT MRDNLAGDRRTWTRVVFFGNA FGHGSRGPLPRKALIRAIALLVPVVLM+EFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRD+NASVNIAICGINMLLG  RP HLCR AG EE+A
Sbjct:    1 MMLPLDDRIVTSVIELALDNIQPIVRVPTLKDFLSAERGTRAEWRALQQEGVRSRQVRKDWKTRLTGDMTERGWWLCMLNLHDKVRVRVPRGAERSGEARMKPLGRKGKLAWGGIRSLWGQRWTIEGDLREYGHKAPPWLVNNITTDGLQVNVTLATKRVETVIPGVAELIEKGYTSINDVYKADTHTRGLFGSAEKMSDQVISALNKKDRRCFIEAVGVDSGQKLLYTAAAARISSDTSSENFKKIQPAFRSASDHKFLSLSKAWRKFEGEAFLGEETQKFRCQEGEDAGDIEDGGTAA---------------------------------------------------ALRKIGPEPEEREALLTRMRDNLAGDRRTWTRVVFFGNAQFGHGSRGPLPRKALIRAIALLVPVVLMNEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDINASVNIAICGINMLLGRTRPQHLCRGAGEEEDA 448          
BLAST of jgi.p|Trimin1|163552 vs. uniprot
Match: A0A835Z611_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z611_9STRA)

HSP 1 Score: 364 bits (934), Expect = 1.720e-111
Identity = 260/730 (35.62%), Postives = 374/730 (51.23%), Query Frame = 1
Query:  157 HVVKSFTSRIQDHLMCYLERLAWDRRRDDHFAYVIKTGAKLLQRAGAVQDDATAAAMIEDFLERPRGADGQQRLHSDWRAAMGSGLTYIRNRLQPFRVAPPAGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDK--PRVLQMEAYFRRENEQYRVAKEVLWTSINNDQPYLAKVMTKAEAQKQLPAFRT-IEPPEWVMEVGDGDLTQEQKVQWCGLQRRISDIRTALLEARRTPGTMFPPKRFTLLPVAELHPMMLPLDDRIITSVIELALDKIQPQGLSSRQIRRDWKARLTGDMTERGWWLCMFNLHGKVRLRTPRSAERGGEANMKPLGRKGKMAWGGLRCLWGQEWTFTEDLSEYGHKAP----PWFVNNITTDGLQVNVTLATKRVETVIPGVAELIEKGYTSIKDVYEADTHTRGLFGSAAKISDQLISMLNEKDRRCFIEAVGVDSGQKLLYTAAAARISSDTSAEDFKKIQPAFRSASDHKFLSLAKARRMFEGERRRDNSAYSTAISQLSE--VSMRTPGGTAAYTDTLHSHFITLAEEKLSWKRRCKSFDAKRAKMREISRMAVQIAGRSAEASALRK------IGPEPKEREALLTSMRDNLAGDRRTWTRVVFFGNALFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDVNASVNIAICGINMLLGMARPPHLCR 2301
            H+ +SF  R + H+ C+LER  WD R  D F+  +   +  +  A ++ +D+ A   IEDFL R RG D   +       A+   +   R+     R A P   +             R     +  +  Y  K     L + + +R E+E +   ++ +WT IN DQP L    TK + ++   +F   + PP W+ E  DG L   +  ++  L  +   +R  +   R  PG   PPKRFTLLPV+ L P  + +D      VI     ++  Q  +SR+ R  W+               +F  + K  +  P    +        L    +    G+  L+   W   +D  +   + P    P+ VNNI +DG++V+ TL T   E   PG  +L++KGY +I + + A  HTRG+F  AA +SD LI+ LN +D  CFIEAVGVD+G + +  +A+AR++S T  + FK       ++ D+K   LA A   FE  +R  N AY  AIS   E   S++   GTA Y D  +S+   LA E LS +RR  +F  +RAK R I+RMA ++ G   EA+  R       +G    E +  + +M D   G+ RTWTRVVFFGNA FGHGS GPLPRK L+  +A +  VVL DEFRT+  CCGCG+ L Q NGSR++ C +   E     CS+RFIDRD NASVNIA+CG++MLLG+ RP HL R
Sbjct:    8 HLKRSFPERAKAHIRCHLERCIWDLRAMDGFSTFLTYASNAIYVAASLDEDSHADEKIEDFLIR-RGEDIPPQSVD----AVFDHMDLYRHDFSGMRGATPPPKKQPT----------RAPAKFSAKRFAYHSKIPANTLPLLSRYREEDEAFIARRQDIWTGINTDQPALRSAKTKEKVRESARSFTEHLPPPSWIDE--DGPLNTAESREYGSLVWKAQALRQQMWVDRCEPGCENPPKRFTLLPVSPLSPAFISID----ADVIAWLGAQMDGQFTASRKDRLPWRN--------------IFAFYTKRVVEGPAKQPKSTRGKRGVLRTNRRKVLRGIPLLYDHAWLMDDDHFKEKRRNPSTPVPFVVNNIKSDGVRVHTTLVTLGAEGA-PGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLSDALIADLNREDSTCFIEAVGVDAGGRKVINSASARVTSTTDHQSFKG-STVHTTSGDYKHQCLATAALKFETAKREQNLAYGGAISSYVEQGASLKIGVGTATYADLAYSNLRALARELLSRERREFAFARQRAKDRAIARMAREMGGADPEAAYKRHLHSGKVVGAARVELQDRVKTMLDR-KGEGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAICVVVLTDEFRTTVRCCGCGEVLKQQNGSRIYGCPTVLDEDH---CSIRFIDRDDNASVNIAMCGVHMLLGLPRPIHLQR 696          
BLAST of jgi.p|Trimin1|163552 vs. uniprot
Match: A0A836CCX3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCX3_9STRA)

HSP 1 Score: 346 bits (887), Expect = 2.210e-104
Identity = 261/737 (35.41%), Postives = 363/737 (49.25%), Query Frame = 1
Query:  157 HVVKSFTSRIQDHLMCYLERLAWDRRRDDHFAYVIKTGAKLLQRAGAVQDDATAAAMIEDFLERPRGADGQQRLHSDWRAAMGSGLTYIRNRLQPFRVAPPAGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRV-LQMEAYFRRENEQYRVAKEVLWTSINNDQPYL-AKVMTKAEAQKQLPAFRTIEPPEWVMEVGDGDLTQEQKVQWCGLQRRISDIRTALLEARRTPGTMFPPKRFTLLPVAELHPMMLPLDDRIITSVIELALDKIQPQGLSSRQIRRDWKARLTGDMTERGWWLCMFNLHGKVRLRTPRSAERGGEANMKPLGRKGKMAWGGLRCLWGQEWTFTEDLSEY---GHKAPPWFVNNITTDGLQVNVTLATKRVETVIPGVAELIEKGYTSIKDVYEADTHTRGLFGSAAKISDQLISMLNEKDRRCFIEAVGVDSGQKLLYTAAAARISSDTSAEDFKKIQPAFRSASDHKFLSLAKARRMFEGERRRDNSAYSTAISQLS--EVSMRTPGGTAAYTDTLHSHFITLAEEKLSWKRRCKSFDAKRAKMREISRMAVQIAGRSAEASALR---------KIGPEPKEREALLTSMRDNLAGDR-RTWTRVVFFGNALFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPE--GDNLDCSVRFIDRDVNASVNIAICGINMLLGMARPPHLCRAAG 2310
            HV+  F  R++ H    +E   W  R +  F   +K+  + L      +DDA A A + DFL RPRG   +  L   W A M S     R  L   R   P   R          D  ++ E     KN     P + L ++A  R  +  +R  +  +WTSIN ++P L   V T+A A+ Q    R  E P W+ E G   LT+++  +W  L     + RTAL  AR+ PGT+ PP+ +T+LPV +L P  + +D  ++ SV+   L K    G +   +R     RL        WW   F+LHG+        A+RG  A    +         GLR L  + W   +   E    G + PP  V  IT+DG + +VTL T  V     G AEL+ +GY +I+         RGLF   A + ++L+  L+  D  CF+EA+GVD GQK L T    R++  T A D K       S  ++++ +LA   + FE ERR  N+ Y  A+   +  E S R P G   ++ T++     +A E LS +RR  +F   RA  R ++ +A  IAG   +A+A R         K    P+ RE LL  +++ LAG R RTWTRVVFFGN  FG G+ GPLPRKAL++ ++ +  VVL DE+ TSK C  CG  L QV GSRVFRC S T E  G    CSVR++DRD     NIA+ G+  L G  RP HL R  G
Sbjct:    8 HVIDEFQGRLEAHFSWLVEIAMWQWRAEPGFDAAVKSAGRCLFLTACFRDDAAAEAKLRDFLTRPRGR-ARVPLGPHWAAGMTSLAREEREALSHLRTPLPNPGRAI--------DPPQLREYRFNVKNF----PHLCLDVKARTRALHAPFRARRGEIWTSINEERPSLRGGVKTRAAARAQRGNLREAEAPAWLDE-GPELLTRDEAREWRALASASWEARTALWLARQEPGTLRPPRGYTMLPVFKLKPAFILIDANVL-SVLGKKLRK--GAGAADDALRTGRSDRL--------WWTKAFDLHGRGTTEQRGQAKRGRRARRAVIXXXXXXXRRGLRILRREGWVLDDSAYEAAKGGRRPPPHLVRCITSDGERCHVTLQTL-VAARPAGAAELVREGYDAIRGTCVVGRDRRGLFRDVAPLPEELLDCLDAGDHACFVEAIGVDPGQKQLITHVRTRVTRRTEAADLKGSDRCI-SGREYRYQNLALRAQRFERERREANAPYRLALESYARDEASARCPRGMELFSRTVYQGLDAVAGEHLSAQRRRFAFARARATDRALAHLARDIAGGDPDAAAERAERRRSAPGKAPVSPRRRE-LLAKVQERLAGGRGRTWTRVVFFGNGQFGSGAAGPLPRKALLKKLSEICCVVLTDEYLTSKTCPCCGGRLAQVAGSRVFRCSSTTDEDSGAGGRCSVRYLDRDCAGGGNIAMIGVRRLQGRGRPAHLARPPG 716          
BLAST of jgi.p|Trimin1|163552 vs. uniprot
Match: D8LP59_ECTSI (N/a n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP59_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 1.460e-96
Identity = 243/711 (34.18%), Postives = 341/711 (47.96%), Query Frame = 1
Query:  190 DHLMCYLERLAWDRRRDDHFAYVIKTGAKLLQRAGAVQDDATAAAMIEDFLERPRGADGQQRLHSDWRAAMGSGLTYIRNRLQPFRVAPPAGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRVLQMEAYFRRENEQYRVAKEVLWTSINNDQPYLAKVMTKAEAQKQLPAFRTIEPPEWVMEVGDGDLTQEQKVQWCGLQRRISDIRTALLEARRTPGTMFPPKRFTLLPVAELHPMMLPLDDRIITSVIELALDKIQPQGLSSRQIRRDWKARLTGDMTERGWWLCMFNLHGKVRLRTPRSAERGGEANMKPLGRKGKMAWGGLRCLWGQEWTFTEDLSEYGHKAP----PWFVNNITTDGLQVNVTLATKRVETVIP-GVAELIEKGYTSIKDVYEADTHTRGLFGSAAKISDQLISMLNEKDRRCFIEAVGVDSGQKLLYTAAAARISSDTS--AEDFKKIQPAFRSASDHKFLSLAKARRMFEGERRRDNSAYSTAISQLSEVSMRTPGGTAAYTDTLHSHFITLAEEKLSWKRRCKSFDAKRAKMREISRMAVQIAGRSAEASALRKIGPEPKEREALLTSMRDNLAGDRRTWTRVVFFGNALFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDVNASVNIAICGINMLLGMARPPHLCR 2301
            DHL C LER  W+ R D+HF   I   AK +  A   +    A  +I  F+++ RG++ ++ L  +W  AM   L+  R   +P RV  P      +     +E   R D    F  N+      VL++EA  R+ +   R  +  +W+ IN  Q  +    TK    KQ    + I  P W     D  +   +K     L R + + R  + ++ R PGT  PPK F+L+P   L    +  D + I ++ +     +   G+S  Q+             ER WW  +F+ H +  +    S E+      + + R       G+       W   E L       P    PW VN+I+TDGLQV V LAT      +P GV EL++KGY SI+D       ++G+F  A  +     S L+  D    IE VG+D GQ  +Y    A I+S  +  A +FK  Q +  S+ ++K  SL +     E  RR D+  Y  A+     VS++ PG + AY+  ++        E LS +RR + F   RA+ R +  MA  IA  +     +RK   +    E L    R  L    R   RVVFFGN  FGHG+RG  PRKALIRA+ +L PVVL+DEFRTSK CC CG  L QV+GSRVFRC S   EG +  CSV+FIDRD N S NI +CG+  LLG+ RP  LCR
Sbjct:    2 DHLSCRLERRLWECRDDEHFWTNIPRAAKKIYEAAGQKTPERALPIIRKFVDQKRGSE-KELLRPEWGEAMEHLLSEYRGLFEPLRVKRPPPKDPPEHPKTEEELTGRED----FLYNVKARLNDVLRIEAGCRKVDFHLRKRRGEIWSEINERQQSIKSSKTKEGFLKQRHLLQEIPVPPWF----DEGIKMSKK-DASNLVRDVRNTRKDMWKSMREPGTEDPPKAFSLMPHFSLTRAFVRYDSQSIGTLAK----SLDFPGVSENQVTLKTTGVKCSGKAERLWWTGIFDFHSERIVNRRPSTEKNQTQRTRKVLRLNNRYRKGIGVCNKDPWFTDEVLYSAKRDDPSCETPWIVNSISTDGLQVKVCLATLAKTNPLPKGVKELVKKGYASIQDKLRVSKSSKGVFKEAFPLYGTEKSRLSSPDNH--IEVVGLDPGQVSVYATVRANITSPKTFEASEFKGSQSSI-SSREYKHQSLTRFSAKAEVGRRLDHVEYGQAVQAFDSVSLKQPGSSVAYSSVIYCTLRVRVVELLSEERRLQKFARLRARQRTVDGMARDIAFGNTYKQEVRK--EQRSSAEPLSPERRKELLKKIRDKKRVVFFGNGQFGHGARGACPRKALIRALGVLCPVVLVDEFRTSKCCCSCGVPLKQVDGSRVFRCSSQMDEGQS--CSVKFIDRDTNGSANIGVCGVFQLLGLKRPSFLCR 691          
BLAST of jgi.p|Trimin1|163552 vs. uniprot
Match: A0A835Z356_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z356_9STRA)

HSP 1 Score: 272 bits (695), Expect = 5.710e-80
Identity = 169/390 (43.33%), Postives = 233/390 (59.74%), Query Frame = 1
Query: 1168 GLRCLWGQEWTFTEDLSEYGHKAP----PWFVNNITTDGLQVNVTLATKRVETVIPGVAELIEKGYTSIKDVYEADTHTRGLFGSAAKISDQLISMLNEKDRRCFIEAVGVDSGQKLLYTAAAARISSDTSAEDFKKIQPAFRSASDHKFLSLAKARRMFEGERRRDNSAYSTAISQLSE--VSMRTPGGTAAYTDTLHSHFITLAEEKLSWKRRCKSFDAKRAKMREISRMAVQIAGRSAEASALRKIGPEPKEREALLTSMRDNLA------GDRRTWTRVVFFGNALFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDVNASVNIAICGINMLLGMARPPHLCR 2301
            G+  L+   W   +D  E   + P    P+ VNNI +DG++V+ TL T   E   PG  +L++KGY +I + + A  HTRG+F  AA + D LI+ LN +D  CFIEAVGVD+G + +  + +AR++S T  + FK       ++ D+K   LA A   F   +R  N AY  AIS   +   S++   GTA Y +  +S+  TL  E LS +RR  +F  +RAK R I+R+A ++ G   EA+  R +    +  EA    ++D +       G  RTWTRVVFFGNA FGHGS GPLPRK L+  +A +  VVL DEFRT+  CCGCG+ L Q +GSR++ C + + E     CS+RFIDRD NASVNIA+CG+NMLLG+ RP HL R
Sbjct:   25 GIPLLYEHAWLMDDDQFEEKRRNPCTPVPFVVNNIKSDGVRVHTTLVTLGAEGA-PGRDQLVKKGYDNITETFVAGEHTRGIFKDAAPLRDALIADLNHEDSTCFIEAVGVDAGGRKVINSGSARVTSTTDHQSFKG-STVHTTSGDYKHQCLATAALKFATAKREQNLAYGGAISSYVKQGASLKIGVGTATYANLAYSNLRTLGRELLSRERREFAFARQRAKDRAIARLAREMGGADPEAAYKRHLH-SGRVVEAGRVELQDRVKTMLDRKGVGRTWTRVVFFGNAQFGHGSAGPLPRKRLLWVLAAVCVVVLTDEFRTTVRCCGCGEVLKQQDGSRIYGCPTVSDEDH---CSIRFIDRDDNASVNIAMCGVNMLLGLPRPIHLQR 408          
BLAST of jgi.p|Trimin1|163552 vs. uniprot
Match: A0A835ZC24_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC24_9STRA)

HSP 1 Score: 282 bits (722), Expect = 1.090e-78
Identity = 243/785 (30.96%), Postives = 358/785 (45.61%), Query Frame = 1
Query:   13 YQAEAERLQDAFIDVYIRDHPFPE----QYKRDFILRTSDVFTKQYEVSVTA-HVVKSFTSRIQDHLMCYLERLAWDRRRDDHFAYVIKTGAKLLQRAGAVQDDATAAAMIEDFLERPRGADGQQRLHSDWRAAMGSGLTYIRNRLQPFRVAPPAGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRV-LQMEAYFRRENEQYRVAKEVLWTSINNDQPYL-AKVMTKAEAQKQLPAFRTIEPPEWVMEVGDGDLTQEQKVQWCGLQRRISDIRTALLEARRTPGTMFPPKRFTLLPVAELHPMMLPLDDRIITSVIELALDKIQPQGLSSRQIRRDWKARLTGDMTERGWWLCMFNLHGKVRLRTPRSAERGGE------ANMKPLGRKGKMAW------------GGLRCLWGQEWTFTE---DLSEYGHKAPPWFVNNITTDGLQVNVTLATKRVETVIPGVAELIEKGYTSIKDVYEADTHTRGLFGSAAKISDQLISMLNEKDRRCFIEAVGVDSGQKLLYTAAAARISSDTSAEDFKKIQPAFRSASDHKFLSLAKARRMFEGERRRDNSAYSTAISQLS--EVSMRTPGGTAAYTDTLHSHFITLAEEKLSWKRRCKSFDAKRAKMREISRMAVQIAGRSAEASALR---------KIGPEPKEREALLTSMRDNLAGDR-RTWTRVVFFGNALFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTSKACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDVNASVNIA 2247
            + +    + D F+D Y+  HP       + +  F+ R  D  +K   V     HV+  F  R++ HL   +E   W  R +  F   +K+  + L      +DDA A A + DFL RPRG   +  L   W A M S     R      R   P          G + D  ++ E     KN     P + L + A  R  +  +R  +  +WTSIN ++P L   V T+A A+ Q    R  E P W+ E G   LT+++  +W  L     + RTAL  AR+ PGT+ PP+ +T+LPV +L P  + +D  ++ SV+   L K       + + RR          ++R WW   F+LHG+     P  A R G+      A  +   ++G+ A              GLR L  + W   +   + ++ G + PP  V  IT+DG + +VTL T  V     G  EL+ +GY +I+         RGLF   A + ++L+  L+  DR CF+EA+G                     A D K       S  ++++ SLA   + FE ERR  N+ Y  A+   +  E S R PGG   ++ T++     +A E+LS +RR  +F   RA  R ++ +A  IAG   +A+A R         K    P+ RE LL ++R+ LAG R RTWTR+VFFGN  FG G+ G LPRKAL++ +A +  VVL DE+ TSK     G       G R               CSVR++DRD     NIA
Sbjct:  128 FNSNTSPIDDPFLDAYLARHPLSAAITWRIQSGFLARPRDAISKDKIVEAARRHVIDEFQGRLEAHLSWLVEIATWQWRAEPGFDAAVKSAGRCLFLTACFRDDAAAEAKLRDFLTRPRGR-ARLPLGPHWAAGMASLAREEREARSHLRTPLP--------NPGRERDAPQLREYRFNIKNF----PHLCLDVMARTRALHAPFRARRGEIWTSINEERPSLRGGVKTRAAARAQRGNLRGAEAPAWLDE-GPELLTRDEVREWRALASAAWEARTALWLARQEPGTLRPPRGYTMLPVFKLKPAFVLIDAEVL-SVLGTKLRKAAGAADGALRTRR----------SDRLWWTKAFDLHGRGTREIPAEARRRGKRYVREYAEQRGQAKRGRRARRAVIKTGRKVRRSGLRILRREGWVLDDAAYEAAKGGRRPPPHLVRCITSDGERCHVTLQTL-VAARPAGAPELVREGYDAIRGTCVVGRDRRGLFRDVAPLPEELLDCLDAGDRACFVEAIG---------------------AADLKGSDRCI-SGREYRYQSLALRAQRFERERREANAPYRLALENYARDEASARCPGGMELFSRTVYQGLDAVAGEQLSAQRRRFAFARARATDRALAHLARDIAGGDPDAAASRAERRRSAPGKSPVSPRRRE-LLANVRERLAGGRGRTWTRIVFFGNGQFGSGAAGRLPRKALLKTLAEICCVVLTDEYLTSKTYEDSGA------GGR---------------CSVRYLDRDCAGGGNIA 842          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|163552 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A835YYX5_9STRA0.000e+0100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYB9_9STRA0.000e+087.16Uncharacterized protein n=2 Tax=Tribonema minus Ta... [more]
A0A836CFJ9_9STRA0.000e+084.03Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z394_9STRA0.000e+069.04Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZC03_9STRA2.840e-23470.54OrfB_Zn_ribbon domain-containing protein n=1 Tax=T... [more]
A0A835Z611_9STRA1.720e-11135.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CCX3_9STRA2.210e-10435.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LP59_ECTSI1.460e-9634.18N/a n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepI... [more]
A0A835Z356_9STRA5.710e-8043.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZC24_9STRA1.090e-7830.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_26contigContig_26:106602..109007 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|163552|e_gw1.26.235.1
Hectar predicted targeting categoryother localisation
TranscriptId163874
TrackFilteredModels1
ProteinId163552
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163552gene_1796Tribonema minus UTEX_B_3156 geneContig_26 106602..109007 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1796_1exon_1796_1Tribonema minus UTEX_B_3156 exonContig_26 106602..107576 +
exon_1796_2exon_1796_2Tribonema minus UTEX_B_3156 exonContig_26 107655..109007 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1796CDS_1796Tribonema minus UTEX_B_3156 CDSContig_26 106602..107576 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|163552Trimin1|163552|e_gw1.26.235.1Tribonema minus UTEX_B_3156 polypeptideContig_26 106602..109007 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1796 ID=mRNA_1796|Name=jgi.p|Trimin1|163552|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2328bp|location=Sequence derived from alignment at Contig_26:106602..109007+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGGGAGTACCTACCAGGCGGAGGCAGAGCGACTGCAGGACGCCTTCAT
CGACGTGTACATCCGAGACCATCCCTTCCCAGAGCAGTACAAGCGTGACT
TCATTCTGCGCACCTCAGATGTCTTCACGAAGCAGTACGAGGTCAGCGTC
ACCGCACACGTGGTCAAGTCTTTCACGTCGAGGATCCAGGATCATCTCAT
GTGCTACCTGGAGAGGCTCGCGTGGGACAGGCGCCGTGATGACCACTTTG
CTTACGTCATCAAGACAGGTGCGAAGCTACTGCAGAGAGCTGGCGCTGTT
CAGGACGACGCCACGGCTGCTGCCATGATCGAAGACTTCCTCGAGCGCCC
CCGAGGCGCAGATGGACAACAGCGGCTTCACTCGGACTGGCGGGCAGCTA
TGGGGTCTGGTCTCACATACATCAGAAATCGCCTTCAGCCGTTCCGTGTC
GCTCCGCCTGCAGGTTTCAGGGGGGCCCAGGTGGAAGATGGCGCGGACGA
AGATGAAGACCGGGTGGACGAGATGGGCACATTCTTCAAGAACATCTACA
GAGACAAACCCCGGGTACTGCAAATGGAGGCATACTTCAGGAGGGAGAAC
GAGCAGTACAGGGTGGCCAAGGAGGTGCTCTGGACGTCCATCAACAACGA
CCAACCTTACCTGGCGAAGGTGATGACCAAGGCGGAAGCGCAGAAGCAGC
TGCCTGCGTTCCGCACCATCGAGCCTCCTGAGTGGGTAATGGAGGTCGGC
GACGGAGATCTGACCCAGGAGCAGAAGGTGCAGTGGTGCGGACTGCAGAG
GCGCATTTCCGACATCAGAACTGCATTGCTAGAGGCTCGGCGCACACCCG
GCACAATGTTCCCGCCCAAGCGGTTCACCCTGCTTCCGGTGGCAGAGCTG
CACCCTATGATGCTCCCGCTAGACGACCGCATCATCACCAGCGTAATCGA
ACTGGCACTGGACAAGATACAACCCCAAGGTCTGAGCAGCCGCCAAATCA
GAAGGGACTGGAAGGCGCGTCTGACGGGAGACATGACGGAGAGGGGATGG
TGGCTGTGCATGTTCAATCTACACGGCAAGGTCCGGCTCAGGACACCTAG
GAGTGCGGAGAGAGGTGGTGAAGCGAACATGAAACCTCTCGGACGCAAGG
GCAAGATGGCTTGGGGGGGCTTACGTTGCCTGTGGGGACAGGAGTGGACT
TTCACGGAAGACCTCAGCGAGTATGGTCATAAAGCTCCTCCGTGGTTCGT
CAACAACATCACTACGGACGGCCTTCAGGTGAATGTCACCCTCGCCACAA
AACGTGTCGAAACCGTCATTCCAGGCGTGGCGGAGCTCATCGAGAAAGGG
TATACATCGATCAAGGACGTCTATGAAGCAGATACACACACCAGAGGCCT
CTTCGGATCTGCAGCGAAGATCTCGGATCAACTCATCTCCATGCTGAACG
AGAAGGACAGGAGGTGCTTCATCGAAGCAGTCGGTGTCGACTCTGGTCAG
AAGCTGCTATACACGGCGGCTGCGGCGCGCATATCAAGCGATACATCCGC
TGAAGACTTCAAGAAGATACAGCCTGCCTTCAGGTCAGCATCGGACCACA
AGTTCTTGAGTCTAGCCAAGGCGAGGCGCATGTTCGAAGGTGAGAGGCGC
CGTGACAACTCGGCTTACAGCACTGCCATCTCTCAACTGTCAGAGGTGTC
TATGCGGACTCCAGGAGGGACGGCCGCTTACACAGACACGCTTCACAGCC
ATTTCATCACACTGGCGGAGGAGAAGCTGTCGTGGAAAAGGAGATGCAAA
AGTTTCGACGCTAAGAGGGCGAAGATGCGGGAGATATCGAGGATGGCGGT
ACAGATCGCTGGACGGAGTGCTGAGGCGAGCGCGCTGCGCAAGATCGGAC
CGGAGCCGAAGGAGAGGGAGGCGCTACTCACGAGCATGCGTGATAACCTT
GCTGGGGACCGGCGGACGTGGACTAGGGTAGTGTTCTTCGGCAATGCGCT
GTTCGGGCACGGTAGCAGAGGGCCTCTGCCTCGTAAGGCGCTCATCAGGG
CTATCGCGCTCTTAGTCCCGGTAGTGTTGATGGACGAGTTTAGAACGTCC
AAGGCCTGTTGCGGGTGCGGGAAGAACTTAGTTCAGGTGAATGGCTCTCG
TGTGTTCCGATGCATATCTTGTACACCAGAGGGCGACAACCTGGACTGCT
CAGTCCGTTTCATCGACAGGGACGTCAACGCTTCAGTGAACATTGCCATA
TGCGGCATCAACATGCTGCTGGGGATGGCTCGACCGCCGCACCTATGCAG
GGCAGCGGGGACTGAGGAAGAGGCGTGA
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protein sequence of jgi.p|Trimin1|163552

>Trimin1|163552|e_gw1.26.235.1 ID=Trimin1|163552|e_gw1.26.235.1|Name=jgi.p|Trimin1|163552|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=776bp
MGSTYQAEAERLQDAFIDVYIRDHPFPEQYKRDFILRTSDVFTKQYEVSV
TAHVVKSFTSRIQDHLMCYLERLAWDRRRDDHFAYVIKTGAKLLQRAGAV
QDDATAAAMIEDFLERPRGADGQQRLHSDWRAAMGSGLTYIRNRLQPFRV
APPAGFRGAQVEDGADEDEDRVDEMGTFFKNIYRDKPRVLQMEAYFRREN
EQYRVAKEVLWTSINNDQPYLAKVMTKAEAQKQLPAFRTIEPPEWVMEVG
DGDLTQEQKVQWCGLQRRISDIRTALLEARRTPGTMFPPKRFTLLPVAEL
HPMMLPLDDRIITSVIELALDKIQPQGLSSRQIRRDWKARLTGDMTERGW
WLCMFNLHGKVRLRTPRSAERGGEANMKPLGRKGKMAWGGLRCLWGQEWT
FTEDLSEYGHKAPPWFVNNITTDGLQVNVTLATKRVETVIPGVAELIEKG
YTSIKDVYEADTHTRGLFGSAAKISDQLISMLNEKDRRCFIEAVGVDSGQ
KLLYTAAAARISSDTSAEDFKKIQPAFRSASDHKFLSLAKARRMFEGERR
RDNSAYSTAISQLSEVSMRTPGGTAAYTDTLHSHFITLAEEKLSWKRRCK
SFDAKRAKMREISRMAVQIAGRSAEASALRKIGPEPKEREALLTSMRDNL
AGDRRTWTRVVFFGNALFGHGSRGPLPRKALIRAIALLVPVVLMDEFRTS
KACCGCGKNLVQVNGSRVFRCISCTPEGDNLDCSVRFIDRDVNASVNIAI
CGINMLLGMARPPHLCRAAGTEEEA*
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mRNA from alignment at Contig_26:106602..109007+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1796 ID=mRNA_1796|Name=jgi.p|Trimin1|163552|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2406bp|location=Sequence derived from alignment at Contig_26:106602..109007+ (Tribonema minus UTEX_B_3156 )
ATGGGGAGTACCTACCAGGCGGAGGCAGAGCGACTGCAGGACGCCTTCAT CGACGTGTACATCCGAGACCATCCCTTCCCAGAGCAGTACAAGCGTGACT TCATTCTGCGCACCTCAGATGTCTTCACGAAGCAGTACGAGGTCAGCGTC ACCGCACACGTGGTCAAGTCTTTCACGTCGAGGATCCAGGATCATCTCAT GTGCTACCTGGAGAGGCTCGCGTGGGACAGGCGCCGTGATGACCACTTTG CTTACGTCATCAAGACAGGTGCGAAGCTACTGCAGAGAGCTGGCGCTGTT CAGGACGACGCCACGGCTGCTGCCATGATCGAAGACTTCCTCGAGCGCCC CCGAGGCGCAGATGGACAACAGCGGCTTCACTCGGACTGGCGGGCAGCTA TGGGGTCTGGTCTCACATACATCAGAAATCGCCTTCAGCCGTTCCGTGTC GCTCCGCCTGCAGGTTTCAGGGGGGCCCAGGTGGAAGATGGCGCGGACGA AGATGAAGACCGGGTGGACGAGATGGGCACATTCTTCAAGAACATCTACA GAGACAAACCCCGGGTACTGCAAATGGAGGCATACTTCAGGAGGGAGAAC GAGCAGTACAGGGTGGCCAAGGAGGTGCTCTGGACGTCCATCAACAACGA CCAACCTTACCTGGCGAAGGTGATGACCAAGGCGGAAGCGCAGAAGCAGC TGCCTGCGTTCCGCACCATCGAGCCTCCTGAGTGGGTAATGGAGGTCGGC GACGGAGATCTGACCCAGGAGCAGAAGGTGCAGTGGTGCGGACTGCAGAG GCGCATTTCCGACATCAGAACTGCATTGCTAGAGGCTCGGCGCACACCCG GCACAATGTTCCCGCCCAAGCGGTTCACCCTGCTTCCGGTGGCAGAGCTG CACCCTATGATGCTCCCGCTAGACGACCGCATCATCACCAGCGTAATCGA ACTGGCACTGGACAAGATACAACCCGTTGTTCACGTCCCTACACTCAAGG ATTTTCTCAGTTCGCACAGGGGCACACGTACGGAATGGAGGGCTCTTCAG CAGCAAGGTCTGAGCAGCCGCCAAATCAGAAGGGACTGGAAGGCGCGTCT GACGGGAGACATGACGGAGAGGGGATGGTGGCTGTGCATGTTCAATCTAC ACGGCAAGGTCCGGCTCAGGACACCTAGGAGTGCGGAGAGAGGTGGTGAA GCGAACATGAAACCTCTCGGACGCAAGGGCAAGATGGCTTGGGGGGGCTT ACGTTGCCTGTGGGGACAGGAGTGGACTTTCACGGAAGACCTCAGCGAGT ATGGTCATAAAGCTCCTCCGTGGTTCGTCAACAACATCACTACGGACGGC CTTCAGGTGAATGTCACCCTCGCCACAAAACGTGTCGAAACCGTCATTCC AGGCGTGGCGGAGCTCATCGAGAAAGGGTATACATCGATCAAGGACGTCT ATGAAGCAGATACACACACCAGAGGCCTCTTCGGATCTGCAGCGAAGATC TCGGATCAACTCATCTCCATGCTGAACGAGAAGGACAGGAGGTGCTTCAT CGAAGCAGTCGGTGTCGACTCTGGTCAGAAGCTGCTATACACGGCGGCTG CGGCGCGCATATCAAGCGATACATCCGCTGAAGACTTCAAGAAGATACAG CCTGCCTTCAGGTCAGCATCGGACCACAAGTTCTTGAGTCTAGCCAAGGC GAGGCGCATGTTCGAAGGTGAGAGGCGCCGTGACAACTCGGCTTACAGCA CTGCCATCTCTCAACTGTCAGAGGTGTCTATGCGGACTCCAGGAGGGACG GCCGCTTACACAGACACGCTTCACAGCCATTTCATCACACTGGCGGAGGA GAAGCTGTCGTGGAAAAGGAGATGCAAAAGTTTCGACGCTAAGAGGGCGA AGATGCGGGAGATATCGAGGATGGCGGTACAGATCGCTGGACGGAGTGCT GAGGCGAGCGCGCTGCGCAAGATCGGACCGGAGCCGAAGGAGAGGGAGGC GCTACTCACGAGCATGCGTGATAACCTTGCTGGGGACCGGCGGACGTGGA CTAGGGTAGTGTTCTTCGGCAATGCGCTGTTCGGGCACGGTAGCAGAGGG CCTCTGCCTCGTAAGGCGCTCATCAGGGCTATCGCGCTCTTAGTCCCGGT AGTGTTGATGGACGAGTTTAGAACGTCCAAGGCCTGTTGCGGGTGCGGGA AGAACTTAGTTCAGGTGAATGGCTCTCGTGTGTTCCGATGCATATCTTGT ACACCAGAGGGCGACAACCTGGACTGCTCAGTCCGTTTCATCGACAGGGA CGTCAACGCTTCAGTGAACATTGCCATATGCGGCATCAACATGCTGCTGG GGATGGCTCGACCGCCGCACCTATGCAGGGCAGCGGGGACTGAGGAAGAG GCGTGA
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Coding sequence (CDS) from alignment at Contig_26:106602..109007+

>mRNA_1796 ID=mRNA_1796|Name=jgi.p|Trimin1|163552|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=2328bp|location=Sequence derived from alignment at Contig_26:106602..109007+ (Tribonema minus UTEX_B_3156 )
ATGGGGAGTACCTACCAGGCGGAGGCAGAGCGACTGCAGGACGCCTTCAT
CGACGTGTACATCCGAGACCATCCCTTCCCAGAGCAGTACAAGCGTGACT
TCATTCTGCGCACCTCAGATGTCTTCACGAAGCAGTACGAGGTCAGCGTC
ACCGCACACGTGGTCAAGTCTTTCACGTCGAGGATCCAGGATCATCTCAT
GTGCTACCTGGAGAGGCTCGCGTGGGACAGGCGCCGTGATGACCACTTTG
CTTACGTCATCAAGACAGGTGCGAAGCTACTGCAGAGAGCTGGCGCTGTT
CAGGACGACGCCACGGCTGCTGCCATGATCGAAGACTTCCTCGAGCGCCC
CCGAGGCGCAGATGGACAACAGCGGCTTCACTCGGACTGGCGGGCAGCTA
TGGGGTCTGGTCTCACATACATCAGAAATCGCCTTCAGCCGTTCCGTGTC
GCTCCGCCTGCAGGTTTCAGGGGGGCCCAGGTGGAAGATGGCGCGGACGA
AGATGAAGACCGGGTGGACGAGATGGGCACATTCTTCAAGAACATCTACA
GAGACAAACCCCGGGTACTGCAAATGGAGGCATACTTCAGGAGGGAGAAC
GAGCAGTACAGGGTGGCCAAGGAGGTGCTCTGGACGTCCATCAACAACGA
CCAACCTTACCTGGCGAAGGTGATGACCAAGGCGGAAGCGCAGAAGCAGC
TGCCTGCGTTCCGCACCATCGAGCCTCCTGAGTGGGTAATGGAGGTCGGC
GACGGAGATCTGACCCAGGAGCAGAAGGTGCAGTGGTGCGGACTGCAGAG
GCGCATTTCCGACATCAGAACTGCATTGCTAGAGGCTCGGCGCACACCCG
GCACAATGTTCCCGCCCAAGCGGTTCACCCTGCTTCCGGTGGCAGAGCTG
CACCCTATGATGCTCCCGCTAGACGACCGCATCATCACCAGCGTAATCGA
ACTGGCACTGGACAAGATACAACCCCAAGGTCTGAGCAGCCGCCAAATCA
GAAGGGACTGGAAGGCGCGTCTGACGGGAGACATGACGGAGAGGGGATGG
TGGCTGTGCATGTTCAATCTACACGGCAAGGTCCGGCTCAGGACACCTAG
GAGTGCGGAGAGAGGTGGTGAAGCGAACATGAAACCTCTCGGACGCAAGG
GCAAGATGGCTTGGGGGGGCTTACGTTGCCTGTGGGGACAGGAGTGGACT
TTCACGGAAGACCTCAGCGAGTATGGTCATAAAGCTCCTCCGTGGTTCGT
CAACAACATCACTACGGACGGCCTTCAGGTGAATGTCACCCTCGCCACAA
AACGTGTCGAAACCGTCATTCCAGGCGTGGCGGAGCTCATCGAGAAAGGG
TATACATCGATCAAGGACGTCTATGAAGCAGATACACACACCAGAGGCCT
CTTCGGATCTGCAGCGAAGATCTCGGATCAACTCATCTCCATGCTGAACG
AGAAGGACAGGAGGTGCTTCATCGAAGCAGTCGGTGTCGACTCTGGTCAG
AAGCTGCTATACACGGCGGCTGCGGCGCGCATATCAAGCGATACATCCGC
TGAAGACTTCAAGAAGATACAGCCTGCCTTCAGGTCAGCATCGGACCACA
AGTTCTTGAGTCTAGCCAAGGCGAGGCGCATGTTCGAAGGTGAGAGGCGC
CGTGACAACTCGGCTTACAGCACTGCCATCTCTCAACTGTCAGAGGTGTC
TATGCGGACTCCAGGAGGGACGGCCGCTTACACAGACACGCTTCACAGCC
ATTTCATCACACTGGCGGAGGAGAAGCTGTCGTGGAAAAGGAGATGCAAA
AGTTTCGACGCTAAGAGGGCGAAGATGCGGGAGATATCGAGGATGGCGGT
ACAGATCGCTGGACGGAGTGCTGAGGCGAGCGCGCTGCGCAAGATCGGAC
CGGAGCCGAAGGAGAGGGAGGCGCTACTCACGAGCATGCGTGATAACCTT
GCTGGGGACCGGCGGACGTGGACTAGGGTAGTGTTCTTCGGCAATGCGCT
GTTCGGGCACGGTAGCAGAGGGCCTCTGCCTCGTAAGGCGCTCATCAGGG
CTATCGCGCTCTTAGTCCCGGTAGTGTTGATGGACGAGTTTAGAACGTCC
AAGGCCTGTTGCGGGTGCGGGAAGAACTTAGTTCAGGTGAATGGCTCTCG
TGTGTTCCGATGCATATCTTGTACACCAGAGGGCGACAACCTGGACTGCT
CAGTCCGTTTCATCGACAGGGACGTCAACGCTTCAGTGAACATTGCCATA
TGCGGCATCAACATGCTGCTGGGGATGGCTCGACCGCCGCACCTATGCAG
GGCAGCGGGGACTGAGGAAGAGGCGTGA
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