mRNA_17937 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|354368 vs. uniprot
Match: A0A835Z343_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z343_9STRA) HSP 1 Score: 767 bits (1981), Expect = 1.070e-278 Identity = 390/390 (100.00%), Postives = 390/390 (100.00%), Query Frame = 3 Query: 180 MYSNASAAYDGLKLPSRALAAVTGDKDHHAFLAGTCCLKEANELQLLHFSDDTNELTCAAVYSHPDEIWDLAPCPSDRNLVLSCHNNNATGRGGAPPRSSDAAFGVMLWRLPAAIPQSPSSSGNSSEPASQPIDKVASLGSAAKPACALLWEPGGQGNRAVTVAGGDLVRWELSGAAAREATTVRVTEGGAAAAAAAWDPHTRTSVAVAAGCGLRIADTRSGGAFTAVANAHRYACRDVDYSPYKPSCVVTCGEDRLLRFWDLRAPGQPLKSVLAHRNHWATRVAYNRFHDQLLATAGSDAAVCLWRVSSLCAAPGPLLLDGEGDXXXXXXXXXGDGAADVLARTYGGHEDSVCAVAWSARDAWVLTSLGHDGRVFAHHVPSAEKYKILL 1349 MYSNASAAYDGLKLPSRALAAVTGDKDHHAFLAGTCCLKEANELQLLHFSDDTNELTCAAVYSHPDEIWDLAPCPSDRNLVLSCHNNNATGRGGAPPRSSDAAFGVMLWRLPAAIPQSPSSSGNSSEPASQPIDKVASLGSAAKPACALLWEPGGQGNRAVTVAGGDLVRWELSGAAAREATTVRVTEGGAAAAAAAWDPHTRTSVAVAAGCGLRIADTRSGGAFTAVANAHRYACRDVDYSPYKPSCVVTCGEDRLLRFWDLRAPGQPLKSVLAHRNHWATRVAYNRFHDQLLATAGSDAAVCLWRVSSLCAAPGPLLLDGEGDXXXXXXXXXGDGAADVLARTYGGHEDSVCAVAWSARDAWVLTSLGHDGRVFAHHVPSAEKYKILL Sbjct: 1 MYSNASAAYDGLKLPSRALAAVTGDKDHHAFLAGTCCLKEANELQLLHFSDDTNELTCAAVYSHPDEIWDLAPCPSDRNLVLSCHNNNATGRGGAPPRSSDAAFGVMLWRLPAAIPQSPSSSGNSSEPASQPIDKVASLGSAAKPACALLWEPGGQGNRAVTVAGGDLVRWELSGAAAREATTVRVTEGGAAAAAAAWDPHTRTSVAVAAGCGLRIADTRSGGAFTAVANAHRYACRDVDYSPYKPSCVVTCGEDRLLRFWDLRAPGQPLKSVLAHRNHWATRVAYNRFHDQLLATAGSDAAVCLWRVSSLCAAPGPLLLDGEGDXXXXXXXXXGDGAADVLARTYGGHEDSVCAVAWSARDAWVLTSLGHDGRVFAHHVPSAEKYKILL 390
BLAST of jgi.p|Trimin1|354368 vs. uniprot
Match: D7FQB0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQB0_ECTSI) HSP 1 Score: 301 bits (772), Expect = 9.150e-95 Identity = 183/441 (41.50%), Postives = 243/441 (55.10%), Query Frame = 3 Query: 180 MYSNASAAYDGLKLPSRALAAVT-----------GDKDHHAFLAGTCCLKEANELQLLHFSDDTNELTCAAVYSHPDEIWDLAPCPSDRNLVLSCHNNNATGRGGAPPRSSDAAFGVMLWRLPAAIPQSP--------SSSGNSSEPASQPIDKVASLGSAAKPACALLWEPGGQGNRA--------VTVAGGDLVRWELSGAAAREATTVRVTEGGAA---------AAAAAWDPHTRTSVAVAAGCGLRIADTRSGGAFTAVANAHRYACRDVDYSPYKPSCVVTCGEDRLLRFWDLRAPGQPLKSVLAHRNHWATRVAYNRFHDQLLATAGSDAAVCLWRVSSLCAAPGPLLLDGEGDXXXXXXXXXGDG---------------AADVLARTYGGHEDSVCAVAWSARDAWVLTSLGHDGRVFAHHVPSAEKYKILL 1349 M+S+AS+ Y+ LK P+R +AA+ G F+ GTC L+E NEL +L F +++NEL C SHP+EIW ++P P+D +L+++C N G+ + F V LWRLP P G+ EP +P+ ++ L +AA A+LW P G G+ + VT+A G L RW L EA + V EGG A AAAWDPH VA AA C + D R+ A T+VA AHR+A RD+DY+P KP C+ TCGEDRL++FWDLR P P+K+++ H +HW V YNRFHDQLL + SD V LWRVSS+ +AP LL+ E D G AAD+ RT+ HE+SV ++AWSA DAWV+ SL +DG V +HVPS EKYKILL Sbjct: 1 MFSSASSTYN-LKRPARCIAALAPQEESPEEEQQGGISSSRFVVGTCSLREPNELHVLGFHEESNELLCHQALSHPNEIWGVSPSPTDPSLLVTCSNGAKAGQN-----NGGVGFKVSLWRLPTPDPNDDPLHEHVMGGERGHPLEPIGEPLAELGGLKAAAT---AMLWSPPGGGSTSSRGGAGEFVTLADGLLKRWNLGDGRFEEAGSATVCEGGQGGGATAAGRGAPAAAWDPHRPVEVATAASCSVTCWDLRTMKATTSVAEAHRFAVRDLDYNPNKPFCLATCGEDRLIKFWDLRRPNAPVKTIVGH-DHWVNTVKYNRFHDQLLVSGSSDCMVHLWRVSSVSSAP---LLEPEDDDAGGLDGDAGXXXXXXXXXXXXGSKGEAADIRVRTFDEHEESVYSLAWSASDAWVMASLSYDGLVVLNHVPSTEKYKILL 428
BLAST of jgi.p|Trimin1|354368 vs. uniprot
Match: A0A7S2HX18_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HX18_9STRA) HSP 1 Score: 215 bits (547), Expect = 7.860e-62 Identity = 152/414 (36.71%), Postives = 219/414 (52.90%), Query Frame = 3 Query: 180 MYSNASAAYDGLKLPSRALAAVTGDKDHHAFLAGTCCLKEANELQLLHFSDDTNELTCAAVYSHPDEIWDLAPCPSDRNLVLSCHNNNATGRGGAPPRSSDAAFGVMLWRLPAAIPQSP-SSSGNSSEPASQPIDKV-------ASLGSAAKPACA-----LLWEPGGQGNRAVTVAGGDLVRWELSGAAAREATTVRVTEGGAAAA----AAAWDP----HTRTSVAVAAGCGLRIADTRSGGAFTA--VANAHRY-ACRDVDYSPYKPSCVVTCGEDRLLRFWDLRAPGQPLKSVLAHRNHWATRVAYNRFHDQLLATAGSDAAVCLWRVSSLCAAPGPLLLDGEGDXXXXXXXXXGDGAADVLARTYGGHEDSVCAVAWSARDAWVLTSLGHDGRVFAHHVPSAEKYKILL 1349 M+S++S AY G KL SR L A + + H FL G+ L+E NE+QL+ ++ ++ TC V+ H EIW ++P P D +L+++ + G P G +LW++ P ++ S + S P + A+L C +LWE + D + + +V+VT+ +A+ A A DP HT +SV+ G + + D R+ V AH Y + RD+DY+P K V T GEDRL++FWDLR+PG+P++ +LA +HW + +NRFHDQLL + G+D+ V LWRVSS+ +AP L L+GEG+ A D RT+ HEDSV AVAWSA DAWV SL +DGRV ++VPS EKYKILL Sbjct: 1 MFSSSSCAYGG-KLQSRCLVAQEANSEQHRFLIGSTSLREENEVQLVDYNQESGMATCLHVFPHAHEIWHMSPSPRDASLLITSFH------GAQGP-------GAVLWKMNTTTEPDPLTNDAQSDDVTSAPDGRARSMSLANANLDEVTTFECVDGLPRILWEQKSASTNQERLVALDEHAFRVLD---MSEASVQVTDTSSASVGRIMAGALDPYGAGHTLSSVS---GVDISVWDCRTSITKPTINVEGAHEYGSIRDIDYNPNKRHVVATSGEDRLIKFWDLRSPGEPMR-ILAGHSHWVPCIKFNRFHDQLLVSGGTDSYVNLWRVSSISSAP-LLELEGEGNCAD---------AGDASIRTFDDHEDSVYAVAWSACDAWVFASLSYDGRVVFNNVPSTEKYKILL 383
BLAST of jgi.p|Trimin1|354368 vs. uniprot
Match: A0A5D6Y0E6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y0E6_9STRA) HSP 1 Score: 212 bits (539), Expect = 1.100e-60 Identity = 146/405 (36.05%), Postives = 203/405 (50.12%), Query Frame = 3 Query: 180 MYSNASAAYD-GLKLPSRALAAVTGDKDHHAFLAGTCCLKEANELQLLHFSDDTNELTCAAVYSHPDEIWDLAPCPSDRNLVLSCHNNNATGRGGAPPRSSDAAFGVMLWRLPAAIPQSPSSSGNSSEPAS-----QPIDKVASLGSAAKPACALLWEPGGQGNRAVTVA--GGDLVRWELSGAAAREATT-------VRVTEGGAAAAAAAWDPHTRTSVAVAAGCGLRIADTRSGGAFTAVANAHRYACRDVDYSPYKPSCVVTCGEDRLLRFWDLRAPGQPLKSVLAHRNHWATRVAYNRFHDQLLATAGSDAAVCLWRVSSLCAAPGPLLLDGEGDXXXXXXXXXGDGAADVLARTYGGHEDSVCAVAWSARDAWVLTSLGHDGRVFAHHVPSAEKYKILL 1349 M+S + ++ G K+ R L A+ GDK++ FL GT L++ N++ +L F NE+T VY+HP ++ +LAP P ++LV++C R + A LWR+ S+ G E A P+ + L P ++ W G + A + G L W L EAT V + A A WDPH V+ G ++ DTR+ AV +AH A D+DY+P KP C+ + G+D L+FWDLR QPL ++ AH HW V YNRFHDQL+ +A SD+ + LWRVSS+ +AP + LD + G D R Y HEDSV AVAW A D+W+ S+ DGR +HVPS EKYKILL Sbjct: 1 MFSAGACSFSVGSKV--RCLEALLGDKENARFLVGTTSLQQPNQIHVLDFDSAANEVTRTQVYAHPSQVQELAPSPFAKDLVVTCGK-----------RVGERAV-ATLWRM-----DDLSNGGGGEERAGGVESPTPLVVLTELPQQKLPVSSVAWNVGDESATATLASAHGTALRTWSLL-VGGSEATVQDKLELDVSLASSPTAVGALRWDPHHPNYVSYTLGGSVQTWDTRAKSVAFAVEDAHLQAALDIDYNPNKPFCLASGGDDGKLKFWDLRQARQPLLALAAHA-HWVWSVRYNRFHDQLVLSASSDSTLALWRVSSISSAP-IVELD---EQDFMSEAAAGADVVDTNVRRYAEHEDSVYAVAWGASDSWLFGSVSFDGRFCVNHVPSTEKYKILL 380
BLAST of jgi.p|Trimin1|354368 vs. uniprot
Match: A0A7S4FB61_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4FB61_CHRCT) HSP 1 Score: 211 bits (536), Expect = 2.960e-60 Identity = 147/412 (35.68%), Postives = 204/412 (49.51%), Query Frame = 3 Query: 168 SWEAMYSNASAAYDGLKLPSRALAAVTGDKDHHAFLAGTCCLKEANELQLLHFSDDTNELTCAAVYSHPDEIWDLAPCPSDRN--LVLSCHNNNATGRGGAPPRSSDAAFGVMLWRLPAAIPQSPS-SSGNSSEPASQPIDKVASLGSAA--KPACALLWE---PGGQGNRAVTVAGGDLVR-WELS-GAAAREATTVRVTEGGAAA--------AAAAWDPHTRTSVAVAAGCGLRIADTRSGGAFTAVANAHRYACRDVDYSPYKPSCVVTCGEDRLLRFWDLRAPGQPLKSVLAHRNHWATRVAYNRFHDQLLATAGSDAAVCLWRVSSLCAAPGPLLLDGEGDXXXXXXXXXGDGAADVLARTYGGHEDSVCAVAWSARDAWVLTSLGHDGRVFAHHVPSAEKYKILL 1349 S AM+ + + + SR L+A+ GD DH+ F+ T L+ N+L ++ F++DTNE+ C VY HP E+W CP+ N LV++ H+N + R + LWR+ + S S PA + ++ LG A+LW P VT + VR W+LS GAAA A E G A+ WDPH + L DTR+ +V +AH R VD++P KP+ +T G+D ++FWDLR P PL S AH +HW T YNRFHDQL+ + G+D+ V LWR +S+ +AP L LD E D + AD + + + HE SV AWSA DAW+ +L DG +HVP AEKYKILL Sbjct: 1 SLPAMFELSGTSSYNTQRQSRCLSALEGDTDHNTFVLATLVLRGENQLHVIDFNEDTNEVWCTRVYEHPSEVWSCVTCPAPENQDLVITAHSNGSEQR-------------ISLWRMEGVAEREHSPESATPLPPAPSKMPELLQLGVPVPLSDTRAVLWNTVLP-----EQVTTVHRESVRVWQLSHGAAASSAA-----ESGHASPPDDERVFGCGRWDPHHAHAXXXXXXXXLITLDTRTMREALSVPSAHEQQVRCVDFNPNKPNVALTSGDDYRIKFWDLRKPSTPLLSEGAH-SHWVTSALYNRFHDQLVLSCGTDSLVKLWRAASVSSAPPSLELD-ETDAA--------EDEADGVVKVFEDHEQSVFGAAWSAADAWIFATLSLDGLAVINHVPPAEKYKILL 379
BLAST of jgi.p|Trimin1|354368 vs. uniprot
Match: W7T6L5_9STRA (Protein tssc1 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T6L5_9STRA) HSP 1 Score: 204 bits (518), Expect = 4.690e-57 Identity = 170/456 (37.28%), Postives = 224/456 (49.12%), Query Frame = 3 Query: 174 EAMYSNASAAYDGLKLPSRALAAVTGDKDHHAFLAGTCCLKE--ANELQLLHFSDDTNELTCAAVYSHPDEIWDLAPCPSDRNLVLSCHNNNATGRGGAPPRSSDAAFGVMLWRL-----PAAIPQSPS-------------------------------------------SSGNSSEPA-SQPIDKVA--SLGSAAKPACALLWEPGGQGNRAVTVAGGDLVR-WELSGAA-AREATT--VRVTEGGAAAAAAAWDPHTRTSVAVAAGCGLRIADTR----SGGAFTAVANA--HRYACRDVDYSPYKPSCVVTCGEDRLLRFWDLRAPGQ-PLKSVLAHRNHWATRVAYNRFHDQLLATAGSDAAVCLWRVSSLCAAPGPLLLDGEGDXXXXXXXXXGDGAADVLARTYGGHEDSVCAVAWSARDAWVLTSLGHDGRVFAHHVPSAEKYKILL 1349 + MYS A Y G K SR LAAV GD +HH F G L++ NEL LL +S++TN+L A+ YSHP EIW ++P P D +L + ++T RG P LWRL P + P SPS S S EP + P+D S G + C +LW P + N V G+ R + L G++ A+E + + V E G AAAWDPH VA+A G G+R D R +G T ++ HR+ +DVD++ KP C VT GEDRL++FWD+R GQ P+K + H HW V YN HDQLL +AG+D V LWR+SS+ +AP L + E G A DV HE+SV AV WSA D ++ SL +DGRV + VP +EKYKILL Sbjct: 4 QVMYSGA-VVY-GAKNQSRCLAAVKGDHEHHRFFVGAAGLRDYPQNELLLLEYSEETNKLREASAYSHPGEIWHISPSPRDSSLCFT----SSTRRGADPL--------CTLWRLSLPEFPHSPPSSPSKDAGDMPRSTTRHSPTQQAFTTSFLAGEGAKKGTKAQHRLIKGSRDQSMEPLITLPVDNDPNKSRGGGGRVRC-VLWGPEQETNGKVLAVDGEKARLYALQGSSDAQEMSNFDLGVEEKGEVQ-AAAWDPHDPWKVAIAQGRGIRHLDMRMEQATGMTETEQSSGFCHRFGVKDVDFNHAKPYCFVTGGEDRLIKFWDIRRTGQGPVKRLAGHA-HWVWTVKYNPCHDQLLLSAGTDNLVNLWRISSISSAP---LWEPE----------EGPEAPDVRVLAIQDHEESVYAVDWSACDPFLFASLSYDGRVVVNAVPPSEKYKILL 429
BLAST of jgi.p|Trimin1|354368 vs. uniprot
Match: A0A8J5X1B5_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X1B5_DIALT) HSP 1 Score: 192 bits (487), Expect = 1.100e-52 Identity = 148/435 (34.02%), Postives = 206/435 (47.36%), Query Frame = 3 Query: 192 ASAAYDGLKLPSRALAAVTGDKDHHAFLAGTCCLKEANELQLLHFSDDTNELTCAAVYSHPDEIWDLAPCP--SDRNLVLSCHNNNATGRGGAPPRSSDAAFGVMLWRLPAA----IPQSPSSSGNSSEPASQPIDKVASLGSAAKPACA--LLWEPGGQGNRAVTVAGGDLVRWELSGAAAREATTVRVTEGGAAAA-----------AAAWDPHTRTSVAVAAGCG-LRIADTRSGGAFTAVANAHRYACRDVDYSPYKPSCVVTCGEDRLLRFWDLRAPGQPLKSVLAHRN-------------------------HWATRVAYNRFHDQLLATAGSDAAVCLWRVSSLCAAPG---PLLLD-GEGDXXXXXXXXXGDGAADVLARTYGGHEDSVCAVAWSARDAWVLTSLGHDGRVFAHHVPSAEKYKILL 1349 A+ +Y+ LK +R LAAV GD D FL T L+ NEL ++ FS+DTNEL AVY+ P E W LA CP + + +L+ N+N AA L +P + P + P + + V S GS A LW P + AVTV G L W L + + T A A +A D H ++A+ + G + D R+ A A+ NAHR R + Y+P +P +++ G+D ++FWDLR + A HW T +NRFHDQL+ TAG+DAAV LWRVSS+ +AP PL D G+G+ DG D L R+ H++SV ++ WSA DAW+ SL DG++ AH+VP+AEKY+ILL Sbjct: 2 AAVSYE-LKSQARCLAAVEGDSDRSRFLVSTLNLRAPNELHVVEFSEDTNELLPIAVYAAPHETWGLAACPLPAHASKLLAVLNDNG------------AAHYAALTSVPVLDADDLGAPPRAGATPLAPLPETVRLVPSAGSGAAHGLLRHALWTPSEDASSAVTVQPGALCLWPLDRGDGTPSASASCTAAAAFGAPTPGGPDGCIESACCDLHHVHTIALGSAAGAISTVDLRTMKAAVALPNAHRSCVRVLAYNPNRPYALLSAGDDGAMKFWDLRRAKAITDAAAAQSAAXXXXXXXXXXXXXACMLRLGGVHLHWTTCALFNRFHDQLVLTAGTDAAVKLWRVSSVSSAPPSSEPLDADDGDGER---------DGDKDGLVRSLSEHDESVYSIVWSAADAWLFASLSLDGKLCAHYVPAAEKYRILL 414
BLAST of jgi.p|Trimin1|354368 vs. uniprot
Match: A0A812DIY3_SEPPH (EIPR1 n=1 Tax=Sepia pharaonis TaxID=158019 RepID=A0A812DIY3_SEPPH) HSP 1 Score: 186 bits (471), Expect = 1.060e-50 Identity = 121/387 (31.27%), Postives = 195/387 (50.39%), Query Frame = 3 Query: 210 GLKLPSRALAAVTGDKDHHAFLAGTCCLKEANELQLLHFSDDTNELTCAAVYSHPDEIWDLAPCPSDRNLVLSCHNNNATGRGGAPPRSSDAAFGVMLWRLPAAIPQSPSSSGNSSEPASQPIDKVASLGSA--AKPACALLWEPGGQGNRAVTVAGGDLVRWELSGAAAR----EATTVRVTEGGAAAAAAAWDPHTRTS-VAVAAGCGLRIADTRSGGAFTAVANAHRYACRDVDYSPYKPSCVVTCGEDRLLRFWDLRAPGQPLKSVLAHRNHWATRVAYNRFHDQLLATAGSDAAVCLWRVSSLCAAPGPLLLDGEGDXXXXXXXXXGDGAADVLARTYGGHEDSVCAVAWSARDAWVLTSLGHDGRVFAHHVPSAEKYKILL 1349 GL+ P+RAL A T + ++ FL GT L+ N++ + F D+ N + EIW ++ D++++ +C+N R +WRLP+ S + +S QP+ + L + + C +LW P G+ + + +A ++ W+L+ A+A +T++ V +G + W+PH + + VA A +R D R+ + NAH RD+D++P K + +CG+D ++FWD+R P P K++ H +HW V YN FHDQL+ ++ SD+ V L V SL + P L++ E + + D + TY HEDSV V WS D W+ SL +DGR+ + VP EKYKILL Sbjct: 10 GLEFPARALTAQTAETENIRFLVGTQSLRAENQIHHIDFDDENNVINKNVFLHREGEIWYISASTMDKDVLATCYNKTVDSR---------TEVQAAVWRLPSDFDNSMNEDHTNSH---QPLQLLCPLDFSDYGEIKC-VLWHPTGEASTLLGLADNHILLWDLNVASASAKIFSSTSLEV-KGQPKMTSGKWNPHHKCAQVATANDTAIRGWDIRTMQQVYVIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDVRNPSTPTKTLTDH-SHWVWSVRYNHFHDQLVLSSSSDSRVILNNVVSLSSEPFGHLVESEENSDSENNERVHEKPTDGVIATYEEHEDSVYQVDWSTADPWIFASLSYDGRLVINRVPRTEKYKILL 381
BLAST of jgi.p|Trimin1|354368 vs. uniprot
Match: A0A2R5GQ58_9STRA (Nuclear distribution protein PAC1-1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQ58_9STRA) HSP 1 Score: 185 bits (470), Expect = 5.050e-50 Identity = 152/447 (34.00%), Postives = 208/447 (46.53%), Query Frame = 3 Query: 174 EAMYSNASAAYDGLKLPSRALAAVTGD-----KDHHAFLAGTCCLK------EANELQLLHFSDDTNELTCAAVYSHPDEIWDLAPCPSDRNLVLSCHNNNATGRGGAPPRSSDAAFGVMLWRLPAAIPQSPSSSGNSSEPASQPIDKVASLGSAAKPACALLWEP---------GGQ--------GNRAVTVAGGDLVRWELSGAAAREATTVRVTEGGAAA-------AAAAWDPHTRTSVAVAAGCGLRIADTRSGGAFTAVANAHRYACRDVDYSPYKPSCVVTCGEDRLLRFWDLRAPGQPLKSVLAHRNHWATRVAYNRFHDQLLATAGSDAAVCLWRVSSLCAAPGPLLLDGEG---------------DXXXXXXXXXGDGA-----ADVLARTYGGHEDSVCAVAWSARDAWVLTSLGHDGRVFAHHVPSAEKYKILL 1349 EA+ + SA DG A D D H FLAGT L +ANE+ L + + N+L A HP E+W LAP + R+L+L+ +G ML+R A +G+ +E A P +L LLW P GG+ R + V G + W++ E + ++ + G + AA WDPH V+V +G + D RS + AH+ RD+DY+P KP +VT GEDR ++FWD+R P QPLK +LAH +HW V YNRFHDQL+ +AG+D+ V LWR+SS+ +AP L D + D A AD L ++Y H DSV +VAWSA +AWV SL DG++ +HVPSAEKYKILL Sbjct: 21 EALPTATSATLDGGDSLGAGADAALDDFDEVHADKHLFLAGTQRLGAEEDTGDANEIVLFEYLEAGNKLETRARMKHPGEVWQLAPHATRRDLLLTIAGTGVERQG-------------MLFRFDA-------DAGSLNELARVPTTTDHTLRK-------LLWHPPETSAAGSLGGEDFEDDHELSERFLAVHDGLVRLWDV------EQSLTQMDDIGTCSLPSPRSLGAACWDPHHIHEVSVGSGDKVVGIDLRSMEITRRIDGAHKLGVRDLDYNPNKPYHLVTGGEDRRVKFWDVRKPDQPLKVILAH-DHWVGAVRYNRFHDQLVLSAGTDSHVSLWRLSSISSAPLLGLDDDDXXXXXXXXXXXXXXXXDTDAHSKGGASTAASTSETADGLVKSYEDHADSVYSVAWSAAEAWVFASLSIDGKLVVNHVPSAEKYKILL 433
BLAST of jgi.p|Trimin1|354368 vs. uniprot
Match: UPI001425819D (EARP and GARP complex-interacting protein 1-like n=1 Tax=Anneissia japonica TaxID=1529436 RepID=UPI001425819D) HSP 1 Score: 183 bits (464), Expect = 1.280e-49 Identity = 133/404 (32.92%), Postives = 204/404 (50.50%), Query Frame = 3 Query: 180 MYSNASAAYDGLKLPSRALAAVTGDKDHHAFLAGTCCLKEANELQLLHFSDDTNELTCAAVYSHPD-EIWDLAPCPSDRNLVLSCHN---NNATGRGGAPPRSSDAAFGVMLWRLPAAIPQSPSS-SGNSSEPASQP-IDKVASLGSA--AKPACALLWEPGGQGNRAVTVAGGDLVRWELSGAAAR----EATTVRVTEGGAAAAAAAWDPH-TRTSVAVAAGCGLRIADTRSGGAFTAVANAHRYACRDVDYSPYKPSCVVTCGEDRLLRFWDLRAPGQPLKSVLAHRNHWATRVAYNRFHDQLLATAGSDAAVCLWRVSSLCAAP-GPLLLDGEGDXXXXXXXXXGDGAADVLARTYGGHEDSVCAVAWSARDAWVLTSLGHDGRVFAHHVPSAEKYKILL 1349 M +A Y GL+ +RAL A + D FL GT LK N++ LL F ++ N+L VY H D EIW + P+D+N++ +C+N +N T R LWR+P S G+ +S P ++ + +L SA C + WEP G++ +T++ ++++W+ ++++ + T+ V +G + +W+PH +A A +R D R+ + NAH RDVD++P K + +CG+D ++FWD R +K++ H +HW V YN FHDQL+ T+ SD+ V L VSS+ + P G D + + D + TY HEDSV A WS D W+ SL DGR+ + VP AEKYKILL Sbjct: 1 MEDDAPVIY-GLEFQARALTAQVAESDAIRFLVGTQSLKFDNQVHLLDFDEENNQLN-KTVYLHKDGEIWHITSSPADKNILATCYNKTIDNKTERL------------TSLWRIPTESDLSEHGVEGHDDTTSSAPSLELLCNLESANFGNIVCTM-WEPQEDGSKMLTLSENNILQWDFQASSSQARISNSATLEV-KGHPKFTSGSWNPHHNNIQIATANDTTIRGWDLRTMQEVYTIENAHSQLVRDVDFNPNKQYYLASCGDDCKVQFWDTRNTSASVKTLKDH-SHWVWSVRYNHFHDQLVLTSSSDSRVILNNVSSISSEPYGHREEDDDDSDIEDSDRKPLEPVQDEMITTYEEHEDSVYAAEWSTADPWLFASLSFDGRLVINRVPRAEKYKILL 387 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354368 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_17937 ID=mRNA_17937|Name=jgi.p|Trimin1|354368|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1394bp|location=Sequence derived from alignment at Contig_235:27306..29401+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATTCGATTGCAGCTTCGTATTGCACTCATGTTAGCCTAGCGATGTGCGGAback to top protein sequence of jgi.p|Trimin1|354368 >Trimin1|354368|estExt_Genemark1.C_Ctg_2350005 ID=Trimin1|354368|estExt_Genemark1.C_Ctg_2350005|Name=jgi.p|Trimin1|354368|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=391bp MYSNASAAYDGLKLPSRALAAVTGDKDHHAFLAGTCCLKEANELQLLHFSback to top mRNA from alignment at Contig_235:27306..29401+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_17937 ID=mRNA_17937|Name=jgi.p|Trimin1|354368|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2096bp|location=Sequence derived from alignment at Contig_235:27306..29401+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_235:27306..29401+ >mRNA_17937 ID=mRNA_17937|Name=jgi.p|Trimin1|354368|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1173bp|location=Sequence derived from alignment at Contig_235:27306..29401+ (Tribonema minus UTEX_B_3156 )back to top |