mRNA_17836 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|354335 vs. uniprot
Match: A0A835Z226_9STRA (FAD_binding_3 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z226_9STRA) HSP 1 Score: 859 bits (2220), Expect = 1.360e-310 Identity = 461/461 (100.00%), Postives = 461/461 (100.00%), Query Frame = 1 Query: 1 MSENKQHLLSISVPQILLQTNYHNVLYPRGLAALSSAGIDLYAPEFNDVATVIAGTVQHDAEPATRQGLGQRSISIDRGDLAQLLLDRAAALPNVRVHYLHLLGGVDVANSVVTFSIVGAEGTHVSQEYDLLVGADGVRSGVRSAMQDQVPGFTAKVVEEDQQYKTVELGDVRALRGYDPSLNWEDRAHFWTNARRGVALLCPPRRGTAVSAALVLPRRGAHSFEAMGTTAESVSAFLMRALPTLQRDVGDAQFGDVVRQLLSGQAPRSNRTVYCSALACGRMALVGDAAHAMSAALGQGVNSALETVAVLARELRCADDAALVKAEDVPAALRTFSARRLRDAHAVCRLSERRMGRTPLGRRLFALQLACTQQLGKLGLAAPPVLFQLGKMDMPYSAIAARQRRQVLAAYALLTAAALPAAMGVMLRSLRVPLLVYSLMAAIAAALRAITASRTAKSTSS 1383 MSENKQHLLSISVPQILLQTNYHNVLYPRGLAALSSAGIDLYAPEFNDVATVIAGTVQHDAEPATRQGLGQRSISIDRGDLAQLLLDRAAALPNVRVHYLHLLGGVDVANSVVTFSIVGAEGTHVSQEYDLLVGADGVRSGVRSAMQDQVPGFTAKVVEEDQQYKTVELGDVRALRGYDPSLNWEDRAHFWTNARRGVALLCPPRRGTAVSAALVLPRRGAHSFEAMGTTAESVSAFLMRALPTLQRDVGDAQFGDVVRQLLSGQAPRSNRTVYCSALACGRMALVGDAAHAMSAALGQGVNSALETVAVLARELRCADDAALVKAEDVPAALRTFSARRLRDAHAVCRLSERRMGRTPLGRRLFALQLACTQQLGKLGLAAPPVLFQLGKMDMPYSAIAARQRRQVLAAYALLTAAALPAAMGVMLRSLRVPLLVYSLMAAIAAALRAITASRTAKSTSS Sbjct: 1 MSENKQHLLSISVPQILLQTNYHNVLYPRGLAALSSAGIDLYAPEFNDVATVIAGTVQHDAEPATRQGLGQRSISIDRGDLAQLLLDRAAALPNVRVHYLHLLGGVDVANSVVTFSIVGAEGTHVSQEYDLLVGADGVRSGVRSAMQDQVPGFTAKVVEEDQQYKTVELGDVRALRGYDPSLNWEDRAHFWTNARRGVALLCPPRRGTAVSAALVLPRRGAHSFEAMGTTAESVSAFLMRALPTLQRDVGDAQFGDVVRQLLSGQAPRSNRTVYCSALACGRMALVGDAAHAMSAALGQGVNSALETVAVLARELRCADDAALVKAEDVPAALRTFSARRLRDAHAVCRLSERRMGRTPLGRRLFALQLACTQQLGKLGLAAPPVLFQLGKMDMPYSAIAARQRRQVLAAYALLTAAALPAAMGVMLRSLRVPLLVYSLMAAIAAALRAITASRTAKSTSS 461
BLAST of jgi.p|Trimin1|354335 vs. uniprot
Match: A0A836CJX1_9STRA (JmjC domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJX1_9STRA) HSP 1 Score: 405 bits (1042), Expect = 5.110e-126 Identity = 237/415 (57.11%), Postives = 280/415 (67.47%), Query Frame = 1 Query: 64 YHNVLYPRGLAALSSAGIDLYAPEFNDVATVIAGTVQHDA--EPATRQGLGQRSISIDRGDLAQLLLDRAAALPNVRVHYLHLLGGVDVANSVVTFSIVGAEGTHVSQEYDLLVGADGVRSGVRSAMQDQVPGFTAKVVEEDQQYKTVELGDVRALRGYDPSLNWEDRAHFWTNARRGVALLCPPRRGTAVSAALVLPRRGAHSFEAMGTTAESVSAFLMRALPTLQRDVGDAQFGDVVRQLLSGQAPRSNRTVYCSALACGRMALVGDAAHAMSAALGQGVNSALETVAVLARELRCADDAALVKAEDVPAALRTFSARRLRDAHAVCRLSERRMGRTPLGRRLFALQLACTQQLGKLGLAAPPVLFQLGKMDMPYSAIAARQRRQVLAAYALLTAAALPAAMGVMLRSLRVPL 1302 YHNVL PRGLAAL+SAGID+YAPE N+VA IAG+V HD EP T +G Q ISIDRGDLAQLLLD+AAALPNVRVHYLH L GVDVA +V TF++VG EGT V QE+DLLVGADGVRSGVR+AMQDQVPGF+ K+VEE+ +YKT+ LG R LRGY+PSL+WE + ++ ALV PR G HSFE+ GTT ESV FL P L+ D ++ + QLLS + P NRTVYCSALA R+ L GVNSALETV +LA EL C A VK EDVPAAL+ F+ARRL DAHAVCR+S+ G+T L R +F +Q+ACT LGKLGLAAPP + Q+ K + YSA+AA+ RRQ A A L A A V LRSL+ PL Sbjct: 560 YHNVLVPRGLAALNSAGIDMYAPEHNNVAVKIAGSVTHDKDKEPRTWKGFVQGYISIDRGDLAQLLLDKAAALPNVRVHYLHSLEGVDVAANVATFNLVGKEGTQVLQEFDLLVGADGVRSGVRAAMQDQVPGFSVKIVEENSEYKTLNLGHARTLRGYEPSLDWEH---------------------STIAGALVQPRSGPHSFESAGTTVESVGTFLAETFPQLREGRTDEEWRGIAEQLLS-KRPAFNRTVYCSALAHARVVL--------------GVNSALETVVMLAEELGCTGTAETVKTEDVPAALQRFNARRLPDAHAVCRISQNSTGKTALARTVFGMQIACTLLLGKLGLAAPPAMMQVAKPHLTYSALAAQMRRQARFANAFLLATVSSIAAAVTLRSLQPPL 938
BLAST of jgi.p|Trimin1|354335 vs. uniprot
Match: A0A835YUS2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUS2_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.100e-36 Identity = 116/390 (29.74%), Postives = 159/390 (40.77%), Query Frame = 1 Query: 55 QTNYHNVLYPRGLAALSSAGIDLYAPEFNDVATVIAGT------------------VQHDAEPATRQG-LGQRSISIDRGDLAQLLLDRAAALPNVRVHYLHLLGGVDVANSVVTFSIVG-AEGT-HVSQEYDLLVGADGVRSGVRSAMQDQVPGFTAKVVEEDQQYKTVELGDVRALRGYDPSLNWED-------------------------------------------------------------------------------------------------RAHFWTNARRGVALLCPPRRGTAVSAALVLPRRGAHSFEAMGTTAESVSAFLMRALPTLQRDVGDAQFGDVVRQLLSGQAPRSNRTVYCSALACGRMALVGDAA 870 + +Y NVL+ R AL AGIDL++ D+A IAG+ VQH A P G ++ +DRGDLAQ LLD LPNVR+HY L +DV + TF+ VG ++G + QE+DLL+GADG+ S VR+A+Q+QVPGFT + + KTV+ G V L GY P +WE R H W G +++C PR + ++LPRRGA +F G ++ A L PTL+ A+ + L + +A TVYCSALA GR+ALV + A Sbjct: 34 ERSYSNVLFGRAFRALGGAGIDLFSDRHKDIAIPIAGSXXXXXXXXXXXXXXXXXSVQHSATPPRASGGFAAGALCVDRGDLAQRLLDSTRGLPNVRIHYSCSLVALDVRGARATFARVGDSDGAPRIEQEFDLLIGADGINSAVRAALQEQVPGFTVRTAADHLVSKTVDFGLVSDLPGYTPGCDWERSSAALAXXXXXXXXXXXXXXXXXXXXXXXXXXXXAPVRCSAHRAAAGAPVRSVLSAGIGINNVRPAPLYNKRVCLFSSLISFAIADVVFFLQAAVLRRVHVWAGRASGASVICAPRLERTATGVVILPRRGAATFARAGADPAALRALLAAQFPTLRLGRTRAEGDALCAALAARRASLPRVTVYCSALAAGRVALVSERA 423
BLAST of jgi.p|Trimin1|354335 vs. uniprot
Match: UPI001F2C4A8C (FAD-dependent monooxygenase n=2 Tax=Acaryochloris TaxID=155977 RepID=UPI001F2C4A8C) HSP 1 Score: 132 bits (332), Expect = 2.080e-29 Identity = 126/399 (31.58%), Postives = 195/399 (48.87%), Query Frame = 1 Query: 61 NYHNVLYPRGLAALSSAGIDLYAPEFNDVATVIAGTVQHDAEPATRQGLGQR-SISIDRGDLAQLLLDRAA-ALP-NVRVHYLHLLGGVDVANSVVTFSIVGAEGTHVSQEYDLLVGADGVRSGVRSAMQDQVPGFTAKVVEEDQQYKTVELGDVRALRGYDPSLNWEDRAHFWTNARRGVALLCPPRRGTAVSAALVLPRRGAHSFEAMGTTAESVSAFLMR---ALPTLQRDVGDAQFGDVVRQLLSGQAPRSNRTVYCSALACGR-MALVGDAAHAMSAALGQGVNSALETVAVLARELRCADDAALVKAEDVPAALRTFSARRLRDAHAVCRLSERRMGRTPLGRR-LFALQLACTQQLGKLGLAAPP-----VLFQLGKMDMPYSAIAARQRRQ 1218 +++ +L RG AL+ G++L D ++ G V+H A+ G G R ++S+DR LAQ+L+ P N++ H+ L V+ + F + Q +DLL+GADGV S VR++M+ Q+ GF + ++ YK +LG + L G + W + H W NA+ + LL PP ++ L+LP+ G ++E + T A+ ++ F + P+L + QF + LLS +A T C+ G + L+GDAAH++ +LGQG N ALE+ + A L A K D+ AL ++A R D A+ RLSE G LF ++ L KL P LFQLG D+PYS I + +RQ Sbjct: 59 SFNIILSRRGRKALTDIGVELPP----DKQVLLQGNVRHTAKGGAL-GKGFRDAVSVDRATLAQVLIAEGQHRFPENIQYHFDQTLLQVNFQDKTALFQ---GKQDQQQQNFDLLIGADGVFSTVRTSMESQLQGFEVRQNQDSMMYKICDLGFAKDLPGVEQK--WAESFHTWPNAQP-LTLLAPPSTDGSLKGVLILPQAGDITYETIQTEADILALFKEKFPDVFPSLDQAGLPPQFA---QDLLSQKAAHGGITTQCNQFEGGDCVVLLGDAAHSVWPSLGQGCNVALESCRIFAEVL------AQTKG-DLSLALPAYTAARKPDTDAIARLSEIGFGGNKRASNILFIAKVVILMFLHKL---LPRWFHKYALFQLGDADVPYSKIWQQVQRQ 433
BLAST of jgi.p|Trimin1|354335 vs. uniprot
Match: B0C0P2_ACAM1 (Kynurenine 3-monooxygenase, putative n=3 Tax=Acaryochloris TaxID=155977 RepID=B0C0P2_ACAM1) HSP 1 Score: 129 bits (325), Expect = 1.910e-28 Identity = 124/395 (31.39%), Postives = 195/395 (49.37%), Query Frame = 1 Query: 61 NYHNVLYPRGLAALSSAGIDLYAPEFNDVATVIAGTVQHDAEPATRQGLGQRSISIDRGDLAQLLLDRAA-ALP-NVRVHYLHLLGGVDVANSVVTFSIVGAEGTHVSQEYDLLVGADGVRSGVRSAMQDQVPGFTAKVVEEDQQYKTVELGDVRALRGYDPSLNWEDRAHFWTNARRGVALLCPPRRGTAVSAALVLPRRGAHSFEAMGTTAESVSAFLMR---ALPTLQRDVGDAQFGDVVRQLLSGQAPRSNRTVYCSALACGR-MALVGDAAHAMSAALGQGVNSALETVAVLARELRCADDAALVKAEDVPAALRTFSARRLRDAHAVCRLSERRMGRTPLGRRL-FALQLACTQQLGKL--GLAAPPVLFQLGKMDMPYSAIAARQRRQ 1218 +++ +L RG AL G++L PE + G V+H A+ A Q ++S+DR LAQ L++ P N++ H+ L V+ + F G + + Q +DLL+GADGV S VR++M+ Q+ GF + +++ YK +LG + L G + W + H W NA+ + LL PP ++ L+LP+ G ++E + + A+ ++ F + P L++ +QF + LLS +A T C+ G + L+GDAAH++ +LGQG N ALE+ + A L A K D+ AL ++ R D AV +LSE G L F ++ L KL LFQLG D+PYS I + +RQ Sbjct: 67 SFNIILSRRGQKALKDIGVEL-PPEKQ---VFLQGNVRHTAKGANLGKGFQDAVSVDRTTLAQCLIEEGQHRFPENIQYHFEQTLLQVNFQDKTALFQ--GKQDQN-QQTFDLLIGADGVYSTVRTSMESQIQGFEVQQNQDNMMYKICDLGFAKNLPGAEEK--WAESFHTWPNAQP-LTLLAPPSTDGSLKGVLILPQVGDITYETLQSEADILALFQEKFPDVFPNLEQTGLPSQFA---QDLLSQKAAHGGITTQCNQFEGGDCVVLLGDAAHSVWPSLGQGCNVALESCRIFAEIL------AQTKG-DLSLALPAYTEARKPDTDAVAQLSEIGFGGNKRASSLLFISKVVILMFLHKLLPRWFQKYALFQLGDADVPYSNIWQQVQRQ 441
BLAST of jgi.p|Trimin1|354335 vs. uniprot
Match: A0A6P0S6X8_9CYAN (FAD-dependent monooxygenase n=4 Tax=unclassified Symploca TaxID=2620434 RepID=A0A6P0S6X8_9CYAN) HSP 1 Score: 129 bits (324), Expect = 2.350e-28 Identity = 109/336 (32.44%), Postives = 169/336 (50.30%), Query Frame = 1 Query: 61 NYHNVLYPRGLAALSSAGIDLYAPEFNDVATVIAGTVQHDAEPATRQGLGQRSISIDRGDLAQLLLDRAA-ALPN-VRVHYLHLLGGVDVANSVVTFSIVGAEGTHVSQEYDLLVGADGVRSGVRSAMQDQVPGFTAKVVEEDQQYKTVELGDVRALRGYDPSLNWEDRAHFWTNARRGVALLCPPRRGTAVSAALVLPRRGAHSFEAMGTTAESVSAFLMRALPTLQRDVGDAQFGDVVRQLLSGQ-APRSNRTVYCSALACGR-MALVGDAAHAMSAALGQGVNSALETVAVLARELRCADDAALVKAEDVPAALRTFSARRLRDAHAVCRLSE 1056 +Y+ VL RGL AL AG+DL P V ++ G V+H A+ T S+SIDR LAQ L++ P+ ++ H+ L V++ + F G G H QE+ LL+GADGV S VRSAM+ Q+ GF + ++ +K +LG + L G + W H W + + + LL PP+ +++ L+LP+ G ++E + T E+V+ + P + ++ Q L GQ A T C+ G + L+GDAAH++ +LGQG N ALE+ + A + A D+ AL +++ R D A+ RLSE Sbjct: 59 SYNIVLNERGLKALQQAGVDL--PSAKQV--ILQGNVRHTAKGTTLSKGFANSVSIDRYTLAQSLIEEGKHRFPHKIQYHFQQTLHQVNLKEKIALFK--GELGEH-QQEFHLLIGADGVFSTVRSAMEAQIQGFQVQQNRDNMMFKICQLGLAKDLPGATET--WTSCFHTWPSVQP-ITLLAPPKTDGSLNGVLILPQEGEITYEQIQTE-EAVAELFAKKFPDIFPELDQKGLPSGFAQDLLGQKAAYGGVTTICTGFEGGDGVVLLGDAAHSVWPSLGQGCNVALESCRIFAETVAQAQG-------DLTVALPSYTMIRKPDTDAIARLSE 376
BLAST of jgi.p|Trimin1|354335 vs. uniprot
Match: A0A836CD76_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CD76_9STRA) HSP 1 Score: 113 bits (282), Expect = 6.460e-25 Identity = 73/143 (51.05%), Postives = 93/143 (65.03%), Query Frame = 1 Query: 856 VGDAAHAMSAALGQGVNSALETVAVLARELRCAD---DA--ALVKAEDVPAALRTFSARRLRDAHAVCRLSERRMGRTPLGRRLFALQ-----------------LACTQQLGKLGLAAPPVLFQLGKMDMPYSAIAARQRRQ 1218 VGDAAH+MSA++GQGVN+ALE+V+VLA EL CA DA A V+AEDVPAA+ +SARRL DA +C +S R GRTPL R +F Q + CT LGKLGL+APP L +G+ D+ Y++I A + RQ Sbjct: 9 VGDAAHSMSASIGQGVNAALESVSVLAEELGCAGKGGDAPCAPVQAEDVPAAVTRYSARRLPDAVGICAMSHRGSGRTPLQRAVFVAQXXXXXXXRDRLGRADAEMMCTAALGKLGLSAPPALALVGRPDISYASIYATELRQ 151
BLAST of jgi.p|Trimin1|354335 vs. uniprot
Match: A0A7S3VMT3_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VMT3_DUNTE) HSP 1 Score: 102 bits (254), Expect = 1.390e-19 Identity = 123/400 (30.75%), Postives = 177/400 (44.25%), Query Frame = 1 Query: 64 YHNVLYPRGLAALSSAGIDLYAPEFNDVATVIAGTVQHD--AEPATRQGLGQRSISIDRGDLAQLLLDRAAAL--PNVRVHYLHLLGGVDVANSVVTFSIVGAEGTHVSQEYDLLVGADGVRSGVRSAMQDQVPGFTAKVVEEDQQYKT-------VELGDVRALRGYDPSLNWEDRAHFWTNARRGVALLCPPRRGTAVSAALVLPRRGAHSFEAMGTTAESVSAFLMRALPTLQRDVGDAQFGDVVRQLLSGQAPRSNRTVYCSALACGRMALVGDAAHAMSAALGQGVNSALETVAVLARELRCADDAALVKAED--VPAALRTFSARRLRDAHAVCRLSERR---MGRTPLGRRLFAL--QLACTQQLGKL--GL--AAPPVLFQLGKMDMPYSAI 1197 Y L PRG A L GI L P + ++ GTV+H EP Q G R+ S R DLAQ+L++ A ++ H+ + +A VTFS + + + YDLLVGADG S VRSAMQ+Q G+TA+V + ++YK +E + + +G H +T + + S + R G H A T E+ L TL ++ +Q L +A + + + C L ++GDAAHA++ GQG NSALE+ VL L D + K + +PAA FS R D HA+ + + P G FAL + GKL GL ++ P L LGK +PYS+I Sbjct: 12 YIIALIPRGQATLERLGIPL--PSSDHYRSL--GTVRHPEKGEPRVTQETGNRTFS--RSDLAQMLVNEARRRYPSQIKFHFGREASQIKLAEKQVTFS--AQDQSDLVLSYDLLVGADGTGSRVRSAMQEQ-DGWTAEVSDSGREYKVYQGLHADLEPPEFKGKKGAT--------LHLYTTNDSFTTVTAHRNPDDSYSGTFSM-RTGEH---AKYNTQEAYEVLLREKFSTLPPH----WVPEIAKQALQAKASSAGKRIKCPQLHSNGAIILGDAAHAVTPVFGQGANSALESCRVLDDTLTACTDPSTGKGDPRLIPAA---FSKERTADVHALWWIDAAAYSFFAKRP-GVDFFALLAHVLVGTIFGKLLPGLYGSSKPALLSLGKASVPYSSI 382
BLAST of jgi.p|Trimin1|354335 vs. uniprot
Match: A0A7S3QWR4_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QWR4_DUNTE) HSP 1 Score: 102 bits (254), Expect = 3.930e-19 Identity = 123/400 (30.75%), Postives = 177/400 (44.25%), Query Frame = 1 Query: 64 YHNVLYPRGLAALSSAGIDLYAPEFNDVATVIAGTVQHD--AEPATRQGLGQRSISIDRGDLAQLLLDRAAAL--PNVRVHYLHLLGGVDVANSVVTFSIVGAEGTHVSQEYDLLVGADGVRSGVRSAMQDQVPGFTAKVVEEDQQYKT-------VELGDVRALRGYDPSLNWEDRAHFWTNARRGVALLCPPRRGTAVSAALVLPRRGAHSFEAMGTTAESVSAFLMRALPTLQRDVGDAQFGDVVRQLLSGQAPRSNRTVYCSALACGRMALVGDAAHAMSAALGQGVNSALETVAVLARELRCADDAALVKAED--VPAALRTFSARRLRDAHAVCRLSERR---MGRTPLGRRLFAL--QLACTQQLGKL--GL--AAPPVLFQLGKMDMPYSAI 1197 Y L PRG A L GI L P + ++ GTV+H EP Q G R+ S R DLAQ+L++ A ++ H+ + +A VTFS + + + YDLLVGADG S VRSAMQ+Q G+TA+V + ++YK +E + + +G H +T + + S + R G H A T E+ L TL ++ +Q L +A + + + C L ++GDAAHA++ GQG NSALE+ VL L D + K + +PAA FS R D HA+ + + P G FAL + GKL GL ++ P L LGK +PYS+I Sbjct: 147 YIIALIPRGQATLERLGIPL--PSSDHYRSL--GTVRHPEKGEPRVTQETGNRTFS--RSDLAQMLVNEARRRYPSQIKFHFGREASQIKLAEKQVTFS--AQDQSDLVLSYDLLVGADGTGSRVRSAMQEQ-DGWTAEVSDSGREYKVYQGLHADLEPPEFKGKKGAT--------LHLYTTNDSFTTVTAHRNPDDSYSGTFSM-RTGEH---AKYNTQEAYEVLLREKFSTLPPH----WVPEIAKQALQAKASSAGKRIKCPQLHSNGAIILGDAAHAVTPVFGQGANSALESCRVLDDTLTACTDPSTGKGDPRLIPAA---FSKERTADVHALWWIDAAAYSFFAKRP-GVDFFALLAHVLVGTIFGKLLPGLYGSSKPALLSLGKASVPYSSI 517
BLAST of jgi.p|Trimin1|354335 vs. uniprot
Match: K8EGY7_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EGY7_9CHLO) HSP 1 Score: 97.4 bits (241), Expect = 1.970e-17 Identity = 132/443 (29.80%), Postives = 186/443 (41.99%), Query Frame = 1 Query: 64 YHNVLYPRGLAALSSAGIDLYAPEFNDVATVIAGTVQHDAEPATRQ--------GLGQR----------------SISIDRGDLAQLLLDRAAAL--PNVRVHY----LHLLGG--VDVANSVVTFSIVGAEGT----------HVSQEYDLLVGADGVRSGVRSAMQ---DQVPGFTAKVVEEDQQYKTVELGDVRALRGYDPSLNWEDRAHFWTNARRGV-ALLCPPRRGTAVSAALVLP-----RRGAHSFEAMGTTAESVSAFLMRALPTLQRDVGDAQFGDVVRQLLSGQAPRSN-RTVYCSALAC--GRMALVGDAAHAMSAALGQGVNSALETVAVLARELRCADDAALVKAEDVPAALRTFSARRLRDAHAVCRLSERRMGRTP---LGRRLFALQLACTQQLGKLGLA--------APPVLFQLGKMDMPYSAI 1197 Y+ VL RG+AAL G+D+ + +AG+V+H+ + R L +R SISI+R LA + A + HY L + GG +D+ + V F E T + ++ YDLLVGADGV S VR AM+ DQ FT K + QYK+V L + G + + W+ H W RG+ +LL PP +S ++LP + S++ + T + V P + Q + L+ Q P + T++CS LA + LVGDA HA+ +LGQG N ALE+ A L AL + ED A+ TF R A RLS G T F L+++ L KL A APP +F LG D Y I Sbjct: 137 YNIVLNQRGVAALRMHGVDV-----DSFGVKLAGSVRHEQKGFKRPLRNPFFLFNLKKRTKIGNVTSRSTNAFSGSISINRSVLAAEIQKAAIERYPTQITFHYNKQILDVPGGTSIDLKSKKVVFERFEGEDTCPFLSEDEDPNETRRYDLLVGADGVNSEVRRAMEIFHDQT--FTVKKHVDGMQYKSVTLPVIGGWIGEEAAEKWKKSFHTWP---RGLNSLLAPPNPDGTLSGVVILPSLAISKNAKWSWDNI-TAPQEVQKMFTELFPNAFGGMLPPQ----ISTSLANQKPANGGTTLFCSHLAMPESNVVLVGDAGHAVWPSLGQGANVALESAACLG--------IALEEIEDTKEAIETFDKLRKPQTDACGRLSMAGFGGTTNRTAASFWFVLRVSTLMILSKLIPASKVPIIGFAPPAIFNLGSPDYTYDEI 556 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354335 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_17836 ID=mRNA_17836|Name=jgi.p|Trimin1|354335|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1986bp|location=Sequence derived from alignment at Contig_232:21546..30291+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGAGTGAGAACAAGCAGCACCTGCTGTCCATCTCCGTGCCTCAAATTCTback to top protein sequence of jgi.p|Trimin1|354335 >Trimin1|354335|estExt_Genemark1.C_Ctg_2320002 ID=Trimin1|354335|estExt_Genemark1.C_Ctg_2320002|Name=jgi.p|Trimin1|354335|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=462bp MSENKQHLLSISVPQILLQTNYHNVLYPRGLAALSSAGIDLYAPEFNDVAback to top mRNA from alignment at Contig_232:21546..30291+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_17836 ID=mRNA_17836|Name=jgi.p|Trimin1|354335|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8746bp|location=Sequence derived from alignment at Contig_232:21546..30291+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_232:21546..30291+ >mRNA_17836 ID=mRNA_17836|Name=jgi.p|Trimin1|354335|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1386bp|location=Sequence derived from alignment at Contig_232:21546..30291+ (Tribonema minus UTEX_B_3156 )back to top |