mRNA_1764 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|346740 vs. uniprot
Match: A0A835YWM2_9STRA (Histone deacetylase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWM2_9STRA) HSP 1 Score: 915 bits (2364), Expect = 0.000e+0 Identity = 441/441 (100.00%), Postives = 441/441 (100.00%), Query Frame = 1 Query: 1 MADVSSNSLPDTTGAVQRRRVAYFYDNEIGNYHYGQGHPMKPHRVRMTHNLIVNYGLYKMMEVFRPKPVSAAQMTRFHSDDYINFLRTITQDNMNEHIRQLQRFNVGEDCPVFDGLYEFCQLYTSGSIGGAVRLNQGLSDIVINWSGGLHHAKKSEASGFCYVNDCVLAILELLKQHQRVLYIDIDIHHGDGVEEAFYSTNRVMTASFHKFGDYFPGTGDVRDVGYGAGANHAINFPLHDGMDDVAYRKVFRPVIAKIMENFRPGAVVMQCGADSLSGDRLGVFNLSLKGHADCVAYVRSFGTPMLVLGGGGYTLRNVPRCWTYETSVLVGADIDDCMPYNDYFMYFGPDFRMHLPVSNMENLNTPEYLEKKTERLLEVLRNIEGAPGAQINTGQPGTGPNVPTAGDGDDEDEDMRDPDERHIPEGKRGGGDAGLEMDVDS 1323 MADVSSNSLPDTTGAVQRRRVAYFYDNEIGNYHYGQGHPMKPHRVRMTHNLIVNYGLYKMMEVFRPKPVSAAQMTRFHSDDYINFLRTITQDNMNEHIRQLQRFNVGEDCPVFDGLYEFCQLYTSGSIGGAVRLNQGLSDIVINWSGGLHHAKKSEASGFCYVNDCVLAILELLKQHQRVLYIDIDIHHGDGVEEAFYSTNRVMTASFHKFGDYFPGTGDVRDVGYGAGANHAINFPLHDGMDDVAYRKVFRPVIAKIMENFRPGAVVMQCGADSLSGDRLGVFNLSLKGHADCVAYVRSFGTPMLVLGGGGYTLRNVPRCWTYETSVLVGADIDDCMPYNDYFMYFGPDFRMHLPVSNMENLNTPEYLEKKTERLLEVLRNIEGAPGAQINTGQPGTGPNVPTAGDGDDEDEDMRDPDERHIPEGKRGGGDAGLEMDVDS Sbjct: 1 MADVSSNSLPDTTGAVQRRRVAYFYDNEIGNYHYGQGHPMKPHRVRMTHNLIVNYGLYKMMEVFRPKPVSAAQMTRFHSDDYINFLRTITQDNMNEHIRQLQRFNVGEDCPVFDGLYEFCQLYTSGSIGGAVRLNQGLSDIVINWSGGLHHAKKSEASGFCYVNDCVLAILELLKQHQRVLYIDIDIHHGDGVEEAFYSTNRVMTASFHKFGDYFPGTGDVRDVGYGAGANHAINFPLHDGMDDVAYRKVFRPVIAKIMENFRPGAVVMQCGADSLSGDRLGVFNLSLKGHADCVAYVRSFGTPMLVLGGGGYTLRNVPRCWTYETSVLVGADIDDCMPYNDYFMYFGPDFRMHLPVSNMENLNTPEYLEKKTERLLEVLRNIEGAPGAQINTGQPGTGPNVPTAGDGDDEDEDMRDPDERHIPEGKRGGGDAGLEMDVDS 441
BLAST of jgi.p|Trimin1|346740 vs. uniprot
Match: A0A7S2UUE0_9STRA (Histone deacetylase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUE0_9STRA) HSP 1 Score: 657 bits (1695), Expect = 6.880e-233 Identity = 300/416 (72.12%), Postives = 361/416 (86.78%), Query Frame = 1 Query: 22 SLPDTTGAVQRRRVAYFYDNEIGNYHYGQGHPMKPHRVRMTHNLIVNYGLYKMMEVFRPKPVSAAQMTRFHSDDYINFLRTITQDNMNEHIRQLQRFNVGEDCPVFDGLYEFCQLYTSGSIGGAVRLNQGLSDIVINWSGGLHHAKKSEASGFCYVNDCVLAILELLKQHQRVLYIDIDIHHGDGVEEAFYSTNRVMTASFHKFGDYFPGTGDVRDVGYGAGANHAINFPLHDGMDDVAYRKVFRPVIAKIMENFRPGAVVMQCGADSLSGDRLGVFNLSLKGHADCVAYVRSFGTPMLVLGGGGYTLRNVPRCWTYETSVLVGADIDDCMPYNDYFMYFGPDFRMHLPVSNMENLNTPEYLEKKTERLLEVLRNIEGAPGAQINTGQPGTGPNVPTAGDGDDEDEDMRDPDERHI 1269 SL DTTG+V +R+V+YFYD +IGNYHYGQGHPMKPHRVRMTHNL+VNYGLY+ +EVFRPKP +A +TRFHSDDYINFLR ITQDNM +++RQLQRFNVGEDCPVFDGL+EFCQLYTSGS+GG+ RLNQG SD+V+NW+GGLHHAKKSEASGFCY+NDCVLA LELLK+HQRV+Y+DIDIHHGDGVEEAFY+T+RVMT SFHKFG+YFPGTGD++D+GYG G N++IN PL DGMDD +Y+++F PV+ +M++F+PGAVV+QCGADSLSGDRLG FNLSL GHADCV +++SFG PMLV+GGGGYTLRNVPRCW YET+VL+ ++ D +PYNDYF Y+GPD+R+H+P SNMEN N P YL + +L EVLR + AP AQI TGQPGTG VP A +EDED ++PD R + Sbjct: 3 SLKDTTGSV-KRKVSYFYDADIGNYHYGQGHPMKPHRVRMTHNLVVNYGLYRHLEVFRPKPCTAEDLTRFHSDDYINFLRVITQDNMQQYLRQLQRFNVGEDCPVFDGLFEFCQLYTSGSVGGSARLNQGHSDLVVNWAGGLHHAKKSEASGFCYINDCVLACLELLKKHQRVMYLDIDIHHGDGVEEAFYTTDRVMTVSFHKFGEYFPGTGDIKDLGYGKGKNYSINVPLQDGMDDKSYKEIFEPVMTSVMQHFQPGAVVLQCGADSLSGDRLGCFNLSLDGHADCVRFMKSFGVPMLVIGGGGYTLRNVPRCWAYETAVLLDTEVKDTLPYNDYFEYYGPDYRLHIPTSNMENHNDPTYLSQIKTQLCEVLRQVPHAPSAQIKTGQPGTGDVVPDAPI-IEEDEDKKNPDSRPL 416
BLAST of jgi.p|Trimin1|346740 vs. uniprot
Match: F0XW11_AURAN (Histone deacetylase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XW11_AURAN) HSP 1 Score: 657 bits (1696), Expect = 8.720e-233 Identity = 306/392 (78.06%), Postives = 344/392 (87.76%), Query Frame = 1 Query: 49 QRRRVAYFYDNEIGNYHYGQGHPMKPHRVRMTHNLIVNYGLYKMMEVFRPKPVSAAQMTRFHSDDYINFLRTITQDNMNEHIRQLQRFNVGEDCPVFDGLYEFCQLYTSGSIGGAVRLNQGLSDIVINWSGGLHHAKKSEASGFCYVNDCVLAILELLKQHQRVLYIDIDIHHGDGVEEAFYSTNRVMTASFHKFGDYFPGTGDVRDVGYGAGANHAINFPLHDGMDDVAYRKVFRPVIAKIMENFRPGAVVMQCGADSLSGDRLGVFNLSLKGHADCVAYVRSFGTPMLVLGGGGYTLRNVPRCWTYETSVLVGADIDDCMPYNDYFMYFGPDFRMHLPVSNMENLNTPEYLEKKTERLLEVLRNIEGAPGAQINTGQPGTGPNVPTAGDG 1224 Q RRVAYFYD EIGN+HYGQGHPMKPHRVRMTHNL+VNYGLY+MMEVFRPKPV+AA MTRFHSDDYINFLR IT DNM+E++RQLQRFNVGEDCPVFDGL+EFCQLYTSGSIGGAVRLNQ SD+VINW+GGLHHAKKSEASGFCYVNDCVL ILELLK+HQRVLYIDIDIHHGDGVEEAFY+TNRVMT SFHKFG+YFPGTGD DVGY G N+AINFPLHDGMDD +++ +F P+I KIME F PGAVV+QCGADSLSGDRLG FNLSLKGHADCV YV +FG PMLVLGGGGYTLRNVPR WTYETSVL+G ++ D +PYNDYF Y+GPD+R+H+PVSNMENLN+ EYLE +L VL+++E PG QI + ++ T+GDG Sbjct: 7 QSRRVAYFYDAEIGNFHYGQGHPMKPHRVRMTHNLVVNYGLYRMMEVFRPKPVNAALMTRFHSDDYINFLRIITPDNMHEYLRQLQRFNVGEDCPVFDGLFEFCQLYTSGSIGGAVRLNQQWSDVVINWAGGLHHAKKSEASGFCYVNDCVLGILELLKRHQRVLYIDIDIHHGDGVEEAFYTTNRVMTVSFHKFGEYFPGTGDAHDVGYDEGKNYAINFPLHDGMDDASFKSIFEPIIGKIMEVFAPGAVVLQCGADSLSGDRLGCFNLSLKGHADCVKYVMTFGVPMLVLGGGGYTLRNVPRVWTYETSVLLGTEVKDVLPYNDYFEYYGPDYRLHMPVSNMENLNSTEYLEHIKTQLFGVLKDVEAVPGVQIKS----QADDMDTSGDG 394
BLAST of jgi.p|Trimin1|346740 vs. uniprot
Match: A0A7S3ZWX5_9STRA (Histone deacetylase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWX5_9STRA) HSP 1 Score: 655 bits (1691), Expect = 6.020e-232 Identity = 302/380 (79.47%), Postives = 338/380 (88.95%), Query Frame = 1 Query: 43 AVQRRRVAYFYDNEIGNYHYGQGHPMKPHRVRMTHNLIVNYGLYKMMEVFRPKPVSAAQMTRFHSDDYINFLRTITQDNMNEHIRQLQRFNVGEDCPVFDGLYEFCQLYTSGSIGGAVRLNQGLSDIVINWSGGLHHAKKSEASGFCYVNDCVLAILELLKQHQRVLYIDIDIHHGDGVEEAFYSTNRVMTASFHKFGDYFPGTGDVRDVGYGAGANHAINFPLHDGMDDVAYRKVFRPVIAKIMENFRPGAVVMQCGADSLSGDRLGVFNLSLKGHADCVAYVRSFGTPMLVLGGGGYTLRNVPRCWTYETSVLVGADIDDCMPYNDYFMYFGPDFRMHLPVSNMENLNTPEYLEKKTERLLEVLRNIEGAPGAQINTG 1182 A RRV+YFYD EIGN+HYGQGHPMKPHRVRMTHNL+VNYGLY+MMEVFRPKPV+AA +TRFHSDDY+NFL+ IT DNM+E++RQLQRFNVGEDCPVFDGL+EFCQLYTSGSIGGAVRLNQ SD+VINW+GGLHHAKKSEASGFCYVNDCVL ILELLK+HQRVLYIDIDIHHGDGVEEAFY+TNRVMT SFHKFG+YFPGTGDV DVGY AG N+AINFPLHDGMDD +++ VF PVI KIME F PGAVV+QCGADSLSGDRLG FNLSL+GHADCV YV FG PMLVLGGGGYTLRNVPR WTYETSVL+G +I D +PYNDYF Y+GPD+R+H+PVSNMENLN+ EYL+ +L VL ++E PG QI +G Sbjct: 3 ASNGRRVSYFYDAEIGNFHYGQGHPMKPHRVRMTHNLVVNYGLYRMMEVFRPKPVNAALLTRFHSDDYVNFLKIITPDNMHEYLRQLQRFNVGEDCPVFDGLFEFCQLYTSGSIGGAVRLNQQWSDVVINWAGGLHHAKKSEASGFCYVNDCVLGILELLKRHQRVLYIDIDIHHGDGVEEAFYTTNRVMTVSFHKFGEYFPGTGDVHDVGYDAGKNYAINFPLHDGMDDASFKSVFEPVIGKIMERFAPGAVVLQCGADSLSGDRLGCFNLSLRGHADCVKYVMGFGVPMLVLGGGGYTLRNVPRVWTYETSVLLGTEIKDVLPYNDYFEYYGPDYRLHMPVSNMENLNSKEYLQHVKAQLFSVLDDVEPVPGVQIKSG 382
BLAST of jgi.p|Trimin1|346740 vs. uniprot
Match: A0A6S8SIJ9_9STRA (Histone deacetylase n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A6S8SIJ9_9STRA) HSP 1 Score: 653 bits (1685), Expect = 1.760e-231 Identity = 300/377 (79.58%), Postives = 336/377 (89.12%), Query Frame = 1 Query: 55 RRVAYFYDNEIGNYHYGQGHPMKPHRVRMTHNLIVNYGLYKMMEVFRPKPVSAAQMTRFHSDDYINFLRTITQDNMNEHIRQLQRFNVGEDCPVFDGLYEFCQLYTSGSIGGAVRLNQGLSDIVINWSGGLHHAKKSEASGFCYVNDCVLAILELLKQHQRVLYIDIDIHHGDGVEEAFYSTNRVMTASFHKFGDYFPGTGDVRDVGYGAGANHAINFPLHDGMDDVAYRKVFRPVIAKIMENFRPGAVVMQCGADSLSGDRLGVFNLSLKGHADCVAYVRSFGTPMLVLGGGGYTLRNVPRCWTYETSVLVGADIDDCMPYNDYFMYFGPDFRMHLPVSNMENLNTPEYLEKKTERLLEVLRNIEGAPGAQINTGQ 1185 RRV+YFYD E+GNYHYGQGHPMKPHRVRMTHNL+VNYGLY+ MEVFRP+ VS MTRFHSDDYINFLR IT DNM ++IRQLQRFNVGEDCPVFDGL+EFCQLYTSGSIGGA+RLN +D VINW+GGLHHAKK+EASGFCYVNDCVLAILELLK+H RVLYIDIDIHHGDGVEEAFY TNRVMT SFHKFG+YFPGTGDV D GY G N+AINFPL+DGMDD +Y+K+FRPVI K+ME F PGAVV+QCGADSLSGDRLG FNLSLKGHADCV +V+SFG P L+LGGGGYTLRNVPRCWTYET+V++G D+ D +PYNDYF YFGPD R+HLPVSNMENLN+P+YLE+ +LLEVLR++E PG QI TGQ Sbjct: 7 RRVSYFYDAEVGNYHYGQGHPMKPHRVRMTHNLVVNYGLYRRMEVFRPRHVSPTAMTRFHSDDYINFLRVITPDNMQDYIRQLQRFNVGEDCPVFDGLFEFCQLYTSGSIGGAMRLNDNQADAVINWAGGLHHAKKAEASGFCYVNDCVLAILELLKKHPRVLYIDIDIHHGDGVEEAFYCTNRVMTVSFHKFGEYFPGTGDVLDTGYAEGKNYAINFPLNDGMDDESYKKIFRPVIGKVMEVFAPGAVVLQCGADSLSGDRLGCFNLSLKGHADCVEFVKSFGVPTLLLGGGGYTLRNVPRCWTYETAVMLGEDVKDELPYNDYFEYFGPDHRLHLPVSNMENLNSPQYLEQTKNQLLEVLRDVEPVPGTQIQTGQ 383
BLAST of jgi.p|Trimin1|346740 vs. uniprot
Match: A0A1E7FBJ6_9STRA (Histone deacetylase n=4 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FBJ6_9STRA) HSP 1 Score: 652 bits (1682), Expect = 2.690e-231 Identity = 298/380 (78.42%), Postives = 337/380 (88.68%), Query Frame = 1 Query: 46 VQRRRVAYFYDNEIGNYHYGQGHPMKPHRVRMTHNLIVNYGLYKMMEVFRPKPVSAAQMTRFHSDDYINFLRTITQDNMNEHIRQLQRFNVGEDCPVFDGLYEFCQLYTSGSIGGAVRLNQGLSDIVINWSGGLHHAKKSEASGFCYVNDCVLAILELLKQHQRVLYIDIDIHHGDGVEEAFYSTNRVMTASFHKFGDYFPGTGDVRDVGYGAGANHAINFPLHDGMDDVAYRKVFRPVIAKIMENFRPGAVVMQCGADSLSGDRLGVFNLSLKGHADCVAYVRSFGTPMLVLGGGGYTLRNVPRCWTYETSVLVGADIDDCMPYNDYFMYFGPDFRMHLPVSNMENLNTPEYLEKKTERLLEVLRNIEGAPGAQINTGQ 1185 + RRV+YFYD E+GNYHYGQGHPMKPHRVRMTHNL+VNYGLY+ MEVFRP+ VS MTRFHSDDYINFL+ IT DNM +++RQLQRFNVGEDCPVFDGL+EFCQLYTSGSIGGA RLN DIVINW+GGLHHAKK+EASGFCYVNDCVLAILELLK+H+RVLYIDIDIHHGDGVEEAFYSTNRVMT SFHKFG+YFPGTGDV DVG+ G N++INFPL+DGMDD +Y+ +FRPVI KIME F PGA+V+QCGADSLSGDRLG FNLS+KGHADCV YVRSFG PMLVLGGGGYTLRNVPRCWTYET+VL G ++ D +P+NDYF YFGPD+R++LPVSNMENLN+PEYLEK +LLE+L ++E P QI TGQ Sbjct: 3 AENRRVSYFYDAEVGNYHYGQGHPMKPHRVRMTHNLVVNYGLYRKMEVFRPRLVSPTAMTRFHSDDYINFLKVITPDNMGDYVRQLQRFNVGEDCPVFDGLFEFCQLYTSGSIGGAARLNDNAVDIVINWAGGLHHAKKAEASGFCYVNDCVLAILELLKKHERVLYIDIDIHHGDGVEEAFYSTNRVMTCSFHKFGEYFPGTGDVHDVGHADGKNYSINFPLNDGMDDKSYKSIFRPVIGKIMEMFAPGAIVLQCGADSLSGDRLGCFNLSVKGHADCVRYVRSFGIPMLVLGGGGYTLRNVPRCWTYETAVLTGEEVKDELPFNDYFEYFGPDYRLNLPVSNMENLNSPEYLEKTKNQLLEILSDVEPVPSVQIQTGQ 382
BLAST of jgi.p|Trimin1|346740 vs. uniprot
Match: A0A7S2H8U2_9STRA (Histone deacetylase n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H8U2_9STRA) HSP 1 Score: 650 bits (1677), Expect = 4.030e-230 Identity = 297/376 (78.99%), Postives = 335/376 (89.10%), Query Frame = 1 Query: 46 VQRRRVAYFYDNEIGNYHYGQGHPMKPHRVRMTHNLIVNYGLYKMMEVFRPKPVSAAQMTRFHSDDYINFLRTITQDNMNEHIRQLQRFNVGEDCPVFDGLYEFCQLYTSGSIGGAVRLNQGLSDIVINWSGGLHHAKKSEASGFCYVNDCVLAILELLKQHQRVLYIDIDIHHGDGVEEAFYSTNRVMTASFHKFGDYFPGTGDVRDVGYGAGANHAINFPLHDGMDDVAYRKVFRPVIAKIMENFRPGAVVMQCGADSLSGDRLGVFNLSLKGHADCVAYVRSFGTPMLVLGGGGYTLRNVPRCWTYETSVLVGADIDDCMPYNDYFMYFGPDFRMHLPVSNMENLNTPEYLEKKTERLLEVLRNIEGAPGAQI 1173 + +RRVAYFYD EIGNYHYGQGHPMKPHRVRMTHNL+VNYGLY+ MEVFRPKPVS QMTRFHSDDYINFLR I DNM+E++R LQRFNVGEDCPVFDGL+EFCQLYTSGSIGGAVRLN+ SD+VINW+GGLHHAKKSEASGFCY+NDCVLAILELLK HQRVLY+DIDIHHGDGVEEAFY+TNRVMT SFHKFG+YFPGTGDV+D+G G N+AINFPLHDGMDD ++R +FRPVI KIME F PGAVV+QCGADSLSGDRLG FNLSL+GHADCV YV+SF P LVLGGGGYTLRNVPRCWTYET+VL+G DI D +PYNDYF Y+GPD+R+H+PVSNMENLNT EYL++ +L ++L +E PG Q+ Sbjct: 5 MSKRRVAYFYDAEIGNYHYGQGHPMKPHRVRMTHNLVVNYGLYRKMEVFRPKPVSRDQMTRFHSDDYINFLRVINPDNMSEYLRHLQRFNVGEDCPVFDGLFEFCQLYTSGSIGGAVRLNKEQSDVVINWAGGLHHAKKSEASGFCYINDCVLAILELLKHHQRVLYVDIDIHHGDGVEEAFYTTNRVMTCSFHKFGEYFPGTGDVQDIGAKDGKNYAINFPLHDGMDDDSFRSIFRPVIGKIMEVFAPGAVVLQCGADSLSGDRLGCFNLSLRGHADCVEYVKSFNIPTLVLGGGGYTLRNVPRCWTYETAVLLGVDIKDALPYNDYFEYYGPDYRLHMPVSNMENLNTREYLDRLKVQLFDILGQVEPVPGVQL 380
BLAST of jgi.p|Trimin1|346740 vs. uniprot
Match: A0A7S1CST8_9STRA (Histone deacetylase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1CST8_9STRA) HSP 1 Score: 645 bits (1665), Expect = 3.220e-228 Identity = 294/388 (75.77%), Postives = 341/388 (87.89%), Query Frame = 1 Query: 28 PDTTGAVQR--RRVAYFYDNEIGNYHYGQGHPMKPHRVRMTHNLIVNYGLYKMMEVFRPKPVSAAQMTRFHSDDYINFLRTITQDNMNEHIRQLQRFNVGEDCPVFDGLYEFCQLYTSGSIGGAVRLNQGLSDIVINWSGGLHHAKKSEASGFCYVNDCVLAILELLKQHQRVLYIDIDIHHGDGVEEAFYSTNRVMTASFHKFGDYFPGTGDVRDVGYGAGANHAINFPLHDGMDDVAYRKVFRPVIAKIMENFRPGAVVMQCGADSLSGDRLGVFNLSLKGHADCVAYVRSFGTPMLVLGGGGYTLRNVPRCWTYETSVLVGADIDDCMPYNDYFMYFGPDFRMHLPVSNMENLNTPEYLEKKTERLLEVLRNIEGAPGAQINTGQ 1185 P +TG+ RRV+YFYD E+GNYHYGQGHPMKPHRVRMTHNL+VNYGLYK M+VFRP+ +S MTRFHSDDYINFL+ IT DNM ++ RQLQRFNVGEDCPVFDGL+EFCQLYTSGSIGGA RLN+ +DIVINWSGGLHHAKK+EASGFCY+NDCVLAILELLK+H+RVLYIDIDIHHGDGVEEAFYSTNRVMT SFHKFG+YFPGTGDV D+GY G N+AINFPL+DGMDD AY VF+PV++K+ME+F PGA+V+QCGADSLSGDRLG FNLS+KGHADCVA++RS+ PMLVLGGGGYTLRNVPRCWTYET+V+VG + D +P+NDY+ YFGPD+ +HLPVSNMENLN+ EYL + +L+E+LR +E PG QI TGQ Sbjct: 7 PTSTGSTSASSRRVSYFYDAEVGNYHYGQGHPMKPHRVRMTHNLVVNYGLYKKMDVFRPRLLSPTAMTRFHSDDYINFLKVITPDNMTDYTRQLQRFNVGEDCPVFDGLFEFCQLYTSGSIGGAARLNEDSADIVINWSGGLHHAKKAEASGFCYINDCVLAILELLKKHERVLYIDIDIHHGDGVEEAFYSTNRVMTVSFHKFGEYFPGTGDVLDIGYADGKNYAINFPLNDGMDDEAYESVFKPVLSKVMEHFAPGAIVLQCGADSLSGDRLGCFNLSVKGHADCVAFMRSYNIPMLVLGGGGYTLRNVPRCWTYETAVVVGEGVKDDLPFNDYYDYFGPDYSLHLPVSNMENLNSKEYLNRTKTQLIEILREVEPVPGTQIQTGQ 394
BLAST of jgi.p|Trimin1|346740 vs. uniprot
Match: A0A7S3K0F9_9STRA (Histone deacetylase n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K0F9_9STRA) HSP 1 Score: 645 bits (1664), Expect = 1.310e-227 Identity = 299/390 (76.67%), Postives = 344/390 (88.21%), Query Frame = 1 Query: 55 RRVAYFYDNEIGNYHYGQGHPMKPHRVRMTHNLIVNYGLYKMMEVFRPKPVSAAQMTRFHSDDYINFLRTITQDNMNEHIRQLQRFNVGEDCPVFDGLYEFCQLYTSGSIGGAVRLNQGLSDIVINWSGGLHHAKKSEASGFCYVNDCVLAILELLKQHQRVLYIDIDIHHGDGVEEAFYSTNRVMTASFHKFGDYFPGTGDVRDVGYGAGANHAINFPLHDGMDDVAYRKVFRPVIAKIMENFRPGAVVMQCGADSLSGDRLGVFNLSLKGHADCVAYVRSFGTPMLVLGGGGYTLRNVPRCWTYETSVLVGADIDDCMPYNDYFMYFGPDFRMHLPVSNMENLNTPEYLEKKTERLLEVLRNIEGAPGAQIN---TGQPGTGPNVPTA 1215 RRVAYFYD+EIGN+HYGQGHPMKPHR+RM HNL+VNYGLY+ MEVFRPKP++ A MTRFHSDDYINFLR IT DNM+E++RQLQRFNVGEDCPVFDGL+EFCQLYTSGSIGGAVRLNQ SDIVINWSGGLHHAKKSEASGFCYVNDCVLAILELLK+HQRVLYIDIDIHHGDGVEEAFY+T+RVMT SFHKFG+YFPGTGDV D+GY G N+AINFPLHDGMDD ++ +F+PVI+K+++ F+PGA++MQCGADSLSGDRLG FNLS+KGHA+CVA+VRS PMLVLGGGGYTLRNVPR WTYETSVL+G +I D +PYNDYF Y+GPD+R+H+PVSNMENLN+ EYLE +L VL++++ AP QI T Q G +PTA Sbjct: 7 RRVAYFYDSEIGNFHYGQGHPMKPHRIRMAHNLVVNYGLYRQMEVFRPKPINPALMTRFHSDDYINFLRVITPDNMHEYLRQLQRFNVGEDCPVFDGLFEFCQLYTSGSIGGAVRLNQQWSDIVINWSGGLHHAKKSEASGFCYVNDCVLAILELLKKHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKFGEYFPGTGDVHDIGYDQGKNYAINFPLHDGMDDESFYSIFKPVISKVIQVFQPGAILMQCGADSLSGDRLGCFNLSIKGHAECVAFVRSLNIPMLVLGGGGYTLRNVPRVWTYETSVLLGTEIKDVLPYNDYFEYYGPDYRLHMPVSNMENLNSTEYLEHIKTQLFNVLKHVQPAPSVQITADPTIQGGGATGLPTA 396
BLAST of jgi.p|Trimin1|346740 vs. uniprot
Match: D7FKQ3_ECTSI (Histone deacetylase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKQ3_ECTSI) HSP 1 Score: 642 bits (1656), Expect = 8.380e-227 Identity = 304/421 (72.21%), Postives = 348/421 (82.66%), Query Frame = 1 Query: 22 SLPDTTGAVQRRRVAYFYDNEIGNYHYGQGHPMKPHRVRMTHNLIVNYGLYKMMEVFRPKPVSAAQMTRFHSDDYINFLRTITQDNMNEHIRQLQRFNVGEDCPVFDGLYEFCQLYTSGSIGGAVRLNQGLSDIVINWSGGLHHAKKSEASGFCYVNDCVLAILELLKQHQRVLYIDIDIHHGDGVEEAFYSTNRVMTASFHKFGDYFPGTGDVRDVGYGAGANHAINFPLHDGMDDVAYRKVFRPVIAKIMENFRPGAVVMQCGADSLSGDRLGVFNLSLKGHADCVAYVRSFGTPMLVLGGGGYTLRNVPRCWTYETSVLVGADIDDCMPYNDYFMYFGPDFRMHLPVSNMENLNTPEYLEKKTERLLEVLRNIEGAPGAQINTGQPGTGPNVPTAGDGDDEDEDMRDPDERHIPEGKR 1284 SLP TG +RRV+YFYD EIGNYHYGQGHPMKPHRVRMTHNL+VNYGLY+ MEVFRPKP+S+ MTRFHSDDYINFLR ITQDNM + QLQRFNVGEDCPVFDGL+EFCQLYTSGSIGGA+RLN SD+VINW+GGLHHAKKSEASGFCYVNDCVLAILELLK HQRVLYIDIDIHHGDGVEEAFY+TNRVMT SFHKFG+YFPGTGDV+DVG G N+AINFPL DG++D +YR +FRPVI K+ME++ P A+VMQCGADSLSGDRLG FNLSLKGHADCV YV+SF P+LVLGGGGYTLRNVPRCW YET VL+ + D +PYNDYF Y+GPD+R+H+P SNME++N E LE+ +L E+LR++E PG I TG P +EDE+M + D+R EG+R Sbjct: 3 SLPSNTGG-NKRRVSYFYDAEIGNYHYGQGHPMKPHRVRMTHNLVVNYGLYRQMEVFRPKPISSQHMTRFHSDDYINFLRVITQDNMQHNYTQLQRFNVGEDCPVFDGLFEFCQLYTSGSIGGAIRLNNKQSDVVINWAGGLHHAKKSEASGFCYVNDCVLAILELLKTHQRVLYIDIDIHHGDGVEEAFYTTNRVMTVSFHKFGEYFPGTGDVKDVGVAQGKNYAINFPLADGINDQSYRSIFRPVIEKVMEHYSPEAIVMQCGADSLSGDRLGCFNLSLKGHADCVQYVKSFNVPLLVLGGGGYTLRNVPRCWAYETGVLLDTEPSDMLPYNDYFEYYGPDYRLHMPTSNMEDMNKRETLEETKIQLFEILRSLEAVPGVPIETGAE---VKTPATLRMPEEDEEMTEADDRPTGEGRR 419 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|346740 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_1764 ID=mRNA_1764|Name=jgi.p|Trimin1|346740|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1665bp|location=Sequence derived from alignment at Contig_4:1947623..1951441- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGGCAGATGTTAGCTCCAACTCTCTACCCGACACCACGGGGGCAGTCCAback to top protein sequence of jgi.p|Trimin1|346740 >Trimin1|346740|estExt_Genemark1.C_Ctg_40222 ID=Trimin1|346740|estExt_Genemark1.C_Ctg_40222|Name=jgi.p|Trimin1|346740|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=442bp MADVSSNSLPDTTGAVQRRRVAYFYDNEIGNYHYGQGHPMKPHRVRMTHNback to top mRNA from alignment at Contig_4:1947623..1951441- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_1764 ID=mRNA_1764|Name=jgi.p|Trimin1|346740|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3819bp|location=Sequence derived from alignment at Contig_4:1947623..1951441- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_4:1947623..1951441- >mRNA_1764 ID=mRNA_1764|Name=jgi.p|Trimin1|346740|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1326bp|location=Sequence derived from alignment at Contig_4:1947623..1951441- (Tribonema minus UTEX_B_3156 )back to top |