mRNA_1763 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|148735
Unique NamemRNA_1763
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|148735 vs. uniprot
Match: A0A835YUA2_9STRA (Vitamin B6 photo-protection and homoeostasis-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUA2_9STRA)

HSP 1 Score: 632 bits (1631), Expect = 1.700e-228
Identity = 335/335 (100.00%), Postives = 335/335 (100.00%), Query Frame = 1
Query:    1 LATILPAGYPEAVNAGYGSYTGWQFTSMVFSSAAGVLSTQALLHAVGLGSGAIPLAAALNWVIKDGLGQLGGVIFSSMVSTRFDANPKLWRMVSALALDASTALELLSPFFPGYFVALASVANVGKNVSFLAASASRAAIHNAFAKRENLADITGKAGSQVIISSMAGMGLGIALAAVVGSEWTYVAPTAAILCFGHLTSTYQCLRPVVLPTIDSQRLELILDAEVATGAIPQPAAVSAHETIFLHPLRAYLSRHKLPSLVIGAQVSEAICTSHELQALWDYATTAVVDNSGVNSSSAQRSACVYLLLLEGATSATVLEGARHAYAVRKALVEQG 1005
            LATILPAGYPEAVNAGYGSYTGWQFTSMVFSSAAGVLSTQALLHAVGLGSGAIPLAAALNWVIKDGLGQLGGVIFSSMVSTRFDANPKLWRMVSALALDASTALELLSPFFPGYFVALASVANVGKNVSFLAASASRAAIHNAFAKRENLADITGKAGSQVIISSMAGMGLGIALAAVVGSEWTYVAPTAAILCFGHLTSTYQCLRPVVLPTIDSQRLELILDAEVATGAIPQPAAVSAHETIFLHPLRAYLSRHKLPSLVIGAQVSEAICTSHELQALWDYATTAVVDNSGVNSSSAQRSACVYLLLLEGATSATVLEGARHAYAVRKALVEQG
Sbjct:    1 LATILPAGYPEAVNAGYGSYTGWQFTSMVFSSAAGVLSTQALLHAVGLGSGAIPLAAALNWVIKDGLGQLGGVIFSSMVSTRFDANPKLWRMVSALALDASTALELLSPFFPGYFVALASVANVGKNVSFLAASASRAAIHNAFAKRENLADITGKAGSQVIISSMAGMGLGIALAAVVGSEWTYVAPTAAILCFGHLTSTYQCLRPVVLPTIDSQRLELILDAEVATGAIPQPAAVSAHETIFLHPLRAYLSRHKLPSLVIGAQVSEAICTSHELQALWDYATTAVVDNSGVNSSSAQRSACVYLLLLEGATSATVLEGARHAYAVRKALVEQG 335          
BLAST of jgi.p|Trimin1|148735 vs. uniprot
Match: A0A835YMG5_9STRA (Vitamin B6 photo-protection and homoeostasis-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG5_9STRA)

HSP 1 Score: 335 bits (859), Expect = 2.540e-108
Identity = 177/284 (62.32%), Postives = 219/284 (77.11%), Query Frame = 1
Query:    1 LATILPAGYPEAVNAGYGSYTGWQFTSMVFSSAAGVLSTQALLHAVGLGSGAIPLAAALNWVIKDGLGQLGGVIFSSMVSTRFDANPKLWRMVSALALDASTALELLSPFFPGYFVALASVANVGKNVSFLAASASRAAIHNAFAKRENLADITGKAGSQVIISSMAGMGLGIALAAVVGSEWTYVAPTAAILCFGHLTSTYQCLRPVVLPTIDSQRLELILDA------------EVATGAIPQPAAVSAHETIFLHPLRAYLSRHKLPSLVIGAQVSEAICT 816
            +ATILPAGYP++V  GY  Y  WQ +SMV +SAAGVLSTQALLHAVGLG+GA+PLAAALNWV+KDGLGQLGG+ FS++V+TRFDANPK+WRMV+A++LD STALELL+P FP +F+ LA++AN GKNVSFLAA+ASRAAIHNAFA RENLAD+TGKAG+Q I+SSM GMGLGIAL+A +G+++  +AP AA L  GHL STY+ L  VVL TID+QRLE+I+              +     +P P +VS  E IF H +R  L   + P LV+GA V EA+ T
Sbjct:   82 VATILPAGYPDSVRPGYARYVRWQLSSMVCTSAAGVLSTQALLHAVGLGAGAVPLAAALNWVVKDGLGQLGGIAFSALVNTRFDANPKMWRMVAAVSLDCSTALELLAPLFPAHFLPLAAIANAGKNVSFLAATASRAAIHNAFAARENLADVTGKAGAQNILSSMGGMGLGIALSAYLGADYATIAPAAAALMCGHLFSTYRSLGSVVLTTIDAQRLEIIVXXXXXXXXXXXXXXDSDNSGVPDPVSVSKTEFIFRHLIRDSLGGGRRPGLVLGASVEEALGT 365          
BLAST of jgi.p|Trimin1|148735 vs. uniprot
Match: D8LJS3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJS3_ECTSI)

HSP 1 Score: 298 bits (762), Expect = 1.760e-94
Identity = 168/339 (49.56%), Postives = 233/339 (68.73%), Query Frame = 1
Query:    1 LATILPAGYPEAVNAGYGSYTGWQFTSMVFSSAAGVLSTQALLHAVGLGSGAIPLAAALNWVIKDGLGQLGGVIFSSMVSTRFDANPKLWRMVSALALDASTALELLSPFFPGYFVALASVANVGKNVSFLAASASRAAIHNAFAKRENLADITGKAGSQVIISSMAGMGLGIALAAVVGSEWTYVAPTAAILCFGHLTSTYQCLRPVVLPTIDSQRLELIL----DAEVATGAIPQPAAVSAHETIFLHPLRAYLSRHKLPSLVIGAQVSEAICTSHELQALWDYATTAVVDNSGVNSSSAQRSACVYLLLLEGATSATVLEGARHAYAVRKALVEQG 1005
            L  +LP+G+P +V+  Y +Y GWQFT M  S+AAGV+STQALL+A+GLG+GA+PLAA LNWVIKDGLGQLGGV FSS+VSTRFDANPKLWR+V+A++LDAS  LELLSP  P YF+ +ASVAN+GKNVSFLAASASRAAIHN  + + NLAD+T K+G+Q I++ MAG G G+ L+A +GSE+  + P    L   HL + +  +R + +PT D QRLEL++    D + + G +P P  ++A E +  + +R  +     P++V+G+++ EA+    EL+ L           S V    A R+  V++LLLEG  +  VL G+  A   ++ L+E+G
Sbjct:    2 LGLVLPSGFPASVHPPYMAYAGWQFTGMAASAAAGVMSTQALLYAMGLGAGALPLAATLNWVIKDGLGQLGGVAFSSLVSTRFDANPKLWRVVAAVSLDASMVLELLSPLAPAYFLPIASVANIGKNVSFLAASASRAAIHNVLSLKGNLADVTAKSGAQTILACMAGTGAGVTLSASLGSEFHAIVPACLCLSVVHLGANHMSMRRLGIPTFDHQRLELVVNGMADGDRSRG-MPSPQDIAAQEDVVAYAVREKIGLDLSPTVVVGSRLKEAVKGWGELEELCRVCEGLPFLLS-VRGDLAHRTGEVHVLLLEGCGAREVLAGSYVALVAKRLLLERG 338          
BLAST of jgi.p|Trimin1|148735 vs. uniprot
Match: A0A6H5L0I8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0I8_9PHAE)

HSP 1 Score: 296 bits (759), Expect = 2.930e-92
Identity = 169/339 (49.85%), Postives = 234/339 (69.03%), Query Frame = 1
Query:    1 LATILPAGYPEAVNAGYGSYTGWQFTSMVFSSAAGVLSTQALLHAVGLGSGAIPLAAALNWVIKDGLGQLGGVIFSSMVSTRFDANPKLWRMVSALALDASTALELLSPFFPGYFVALASVANVGKNVSFLAASASRAAIHNAFAKRENLADITGKAGSQVIISSMAGMGLGIALAAVVGSEWTYVAPTAAILCFGHLTSTYQCLRPVVLPTIDSQRLELILDAEVATG----AIPQPAAVSAHETIFLHPLRAYLSRHKLPSLVIGAQVSEAICTSHELQALWDYATTAVVDNSGVNSSSAQRSACVYLLLLEGATSATVLEGARHAYAVRKALVEQG 1005
            L  +LP+G+P +V+  Y +Y GWQFT M  S+AAGV+STQALL+A+G+G GA+PLAA LNWVIKDGLGQLGGV FSS+VSTRFDANPKLWR+V+A++LDAS  LELLSP  P YF+ +ASVAN+GKNVSFLAASASRAAIHN  + + NLAD+T K+G+Q I++ MAG G G+AL+A +GSE+  + P    L   HL + +  +R + +PT D QRLEL+++A +A G     IP P  ++A E +  + +R  +  +  P++V+G+++ EA+    EL+ L           S V    A  +  V++LLLEG  +  VL G+  A   ++ L+E+G
Sbjct:  173 LGLVLPSGFPGSVHPPYMAYAGWQFTGMAASAAAGVMSTQALLYAMGVGVGALPLAATLNWVIKDGLGQLGGVAFSSLVSTRFDANPKLWRIVAAVSLDASMVLELLSPLAPAYFLPIASVANIGKNVSFLAASASRAAIHNVLSLKGNLADVTAKSGAQTILACMAGTGAGVALSASLGSEFHAIVPACLCLSVVHLGANHMSMRRLGIPTFDHQRLELVVNA-MADGDRSRGIPSPQDIAAQEDVVAYAVREKIGLNLSPTVVVGSRLEEAVKGWGELEELCRVCEGLPFLLS-VRGDLAHGAGEVHVLLLEGYGTREVLAGSYVALVAKRLLLERG 509          
BLAST of jgi.p|Trimin1|148735 vs. uniprot
Match: W7TSK4_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSK4_9STRA)

HSP 1 Score: 283 bits (725), Expect = 3.970e-88
Identity = 170/342 (49.71%), Postives = 226/342 (66.08%), Query Frame = 1
Query:    1 LATILPAGYPEAVNAGYGSYTGWQFTSMVFSSAAGVLSTQALLHAVGLGSGAIPLAAALNWVIKDGLGQLGGVIFSSMVSTRFDANPKLWRMVSALALDASTALELLSPFFPGYFVALASVANVGKNVSFLAASASRAAIHNAFAKRENLADITGKAGSQVIISSMAGMGLGIALAAVVGSEWTYVAPTAAILCFGHLTSTYQCLRPVVLPTIDSQRLELILDAEVATGAIPQPAAVSAHETIFLHP-----LRAYLSRHKLPSLVIGAQVSEAICTSHELQALWDYATTAVVDNSGVNSSSAQR--SACVYLLLLEGATSATVLEGARHAYAVRKALVEQG 1005
            L  +LP GYP +V  GY  Y   Q T+ + SSA GVLSTQ+LL+A+GLG+GAIPLAAALNW+IKDG+GQ+GG++F+S+V+ RFDANPK W+MV+ ++LD S  LELL+P  P YF+A+AS+ANVGKNV FL+ASASRAAIHN+FAKRENLADIT KAGSQ I++S+ G GLGIAL+  +GS W  +AP  A L F H++  Y  LR V L T++++R EL+LD   + G IP P  VS  E  F+ P     +     +  LP L +G  + E + +  +L  L   A     D   +N+    R  +A V +L+ E A+   VL    HAY VR+    +G
Sbjct:  112 LRALLPRGYPRSVQKGYVEYVKLQMTASLASSAVGVLSTQSLLYAMGLGAGAIPLAAALNWIIKDGIGQVGGIVFASVVNDRFDANPKRWKMVATISLDLSCGLELLAPLAPAYFLAIASLANVGKNVCFLSASASRAAIHNSFAKRENLADITAKAGSQFIVTSILGTGLGIALSTALGSSWMALAPICAGLSFIHISCNYLSLRHVCLNTLNAERAELVLDRFWSQGRIPHPGEVSGEEC-FMWPAIYDTVAPSALKSGLPILRMGRPLHE-VASPRQLVRL---ARLFARDGYLLNARGRARDGTATVDVLMKEDASVEDVLRACIHAYYVRREASARG 448          
BLAST of jgi.p|Trimin1|148735 vs. uniprot
Match: T0RLK8_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RLK8_SAPDV)

HSP 1 Score: 241 bits (614), Expect = 1.310e-72
Identity = 152/324 (46.91%), Postives = 203/324 (62.65%), Query Frame = 1
Query:   10 ILPAGYPEAVNAGYGSYTGWQFTSMVFSSAAGVLSTQALLHAVGLGSGAIPLAAALNWVIKDGLGQLGGVIFSSMVSTRFDANPKLWRMVSALALDASTALELLSPFFPGYFVALASVANVGKNVSFLAASASRAAIHNAFAKRENLADITGKAGSQVIISSMAGMGLGIALAAVVGSEWTYVAPTAAILCFGHLTSTYQCLRPVVLPTIDSQRLELILDAEVATGAIPQPAAVSAHETIFLHPLRAYLSRHKLPSLVIGAQVSEAICTSHELQALWD---YATTAVVDNSGVNSSSAQRSACVYLLLLEGATSATVLEGARHA 972
             LP  Y  +    Y  Y  WQF   V  +A GVLS Q+LL+A+GL SGAIP+AAALNWVIKDGLGQ GGV+F+S+V+ RFD++PK WR+VSALA+DA+T  E+L+P  P YF+ +A++ANV KN+S+L+ASA+RA  H +FAK ENLADIT KAGSQ I SS+ G  LGIA++ ++G+  ++VA    +L   +L S Y  LR V L T++ QRL  ILDA +A  AIP P  VS  E  F+  L +  + H   S +  A   +A+ T   +  +W    Y     VD +  +       A V+LL+   ATS  VL    HA
Sbjct:   82 FLPRDYKTSTTHDYLPYAKWQFVGSVAGTACGVLSMQSLLYAIGLQSGAIPMAAALNWVIKDGLGQFGGVLFASLVNHRFDSDPKRWRVVSALAMDAATLTEILTPLCPAYFLPMAAMANVAKNISWLSASATRAGFHYSFAKTENLADITAKAGSQSIASSILGTALGIAISPIIGTTTSHVAGAFFVLSSINLWSLYNSLRVVSLRTLNQQRLNHILDAFIANAAIPTPDVVSQQER-FVSNLLSGKACHLQHSHLDVASRLDAVYTPSTV--IWPGEKYLLHVDVDATTSH-------ATVHLLMEASATSDEVLAAHLHA 395          
BLAST of jgi.p|Trimin1|148735 vs. uniprot
Match: A0A6G0WBV7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBV7_9STRA)

HSP 1 Score: 238 bits (606), Expect = 2.260e-71
Identity = 129/270 (47.78%), Postives = 180/270 (66.67%), Query Frame = 1
Query:   10 ILPAGYPEAVNAGYGSYTGWQFTSMVFSSAAGVLSTQALLHAVGLGSGAIPLAAALNWVIKDGLGQLGGVIFSSMVSTRFDANPKLWRMVSALALDASTALELLSPFFPGYFVALASVANVGKNVSFLAASASRAAIHNAFAKRENLADITGKAGSQVIISSMAGMGLGIALAAVVGSEWTYVAPTAAILCFGHLTSTYQCLRPVVLPTIDSQRLELILDAEVATGAIPQPAAVSAHETIFLHPLRAYLSRHKLPSLVIGAQVSEAICTS 819
             LP  Y  + +  Y  Y  WQF + V  S AGVLS Q+LL+A+GL SG IP+AAALNWVIKDGLGQ GGV+F+S+V+ RFDA+PK WR VSA+A+DA+T +E+L+P  P YF+ +A+ ANV KN+S+L+ASA+RA  H +FA+RENLADIT KAGSQ I SS+AG  LGIA++ +VG+   +VA    +L   +L S Y+ L  V L T++ QRL LI+D       + QP  V+  E         Y +R +  ++ + +++ + +  S
Sbjct:   78 FLPRDYATSTSHDYLPYVKWQFVASVAGSTAGVLSMQSLLYAIGLQSGTIPMAAALNWVIKDGLGQFGGVLFASLVNHRFDADPKRWRAVSAVAMDAATLIEILTPLVPAYFLPMAATANVAKNISWLSASATRAGFHYSFAQRENLADITAKAGSQSIASSIAGTALGIAISPIVGTSTVHVAAAFGVLSCLNLFSIYKSLSVVALRTLNQQRLHLIVDEYWQEDKVLQPTDVNGLEKFVSTIFSGYPNRFQRSTVALSSRLDQVLTPS 347          
BLAST of jgi.p|Trimin1|148735 vs. uniprot
Match: A0A024TGH2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TGH2_9STRA)

HSP 1 Score: 237 bits (605), Expect = 6.180e-71
Identity = 150/343 (43.73%), Postives = 210/343 (61.22%), Query Frame = 1
Query:   10 ILPAGYPEAVNAGYGSYTGWQFTSMVFSSAAGVLSTQALLHAVGLGSGAIPLAAALNWVIKDGLGQLGGVIFSSMVSTRFDANPKLWRMVSALALDASTALELLSPFFPGYFVALASVANVGKNVSFLAASASRAAIHNAFAKRENLADITGKAGSQVIISSMAGMGLGIALAAVVGSEWTYVAPTAAILCFGHLTSTYQCLRPVVLPTIDSQRLELILD----------AEVAT-GAIPQPAAVSAHETIFLHPLRAYLSRHKLPSLVIGAQVSEAICTSHELQALWDYATTAVVDNSGVNSSSAQRSACVYLLLLEGATSATVLEGARHAYAVRKALVEQG 1005
             LP  +  + +  Y  Y  +QF + V  S  GVLS Q+LL A+GL SGAIP+AAALNWVIKDGLGQ GGV+F+S+V+ RFDA+PK WRMVSA A+DA+T +E+L+P  P YF+ +A+ ANV KN+S+L++SA+RA  H +FA++ENLADIT KAGSQ I SS+ G  LGIA++ +VGS    VA    +L   HL S Y+ L  V L T++ QRL L++D            +A    I  P+ VSA+E   L     Y SR +  S+ + +++ +       L+ L  +A    +     + +S + +  V+LLL   ATS  VL+G  H   +R  L+E G
Sbjct:   81 FLPRDHTTSTSPDYLPYVRYQFIASVAGSTCGVLSMQSLLFAIGLQSGAIPMAAALNWVIKDGLGQFGGVLFASLVNHRFDADPKRWRMVSAFAMDAATLVEILTPLCPAYFLPMAATANVAKNISWLSSSATRAGFHYSFAQKENLADITAKAGSQSIASSIVGTALGIAISPIVGSATANVAAAFGVLSAIHLVSIYKSLSIVALHTLNQQRLHLVIDHYWQGHDRSTTHLANENPILSPSEVSANEAFVLRFQSGYPSRFQRTSVALSSRLDKL-----RLETLDTFANERYLLQVDDDVASRRGARVVHLLLHADATSVDVLKGHLHLVRLRM-LLEDG 417          
BLAST of jgi.p|Trimin1|148735 vs. uniprot
Match: K3XB12_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XB12_GLOUD)

HSP 1 Score: 236 bits (601), Expect = 2.150e-70
Identity = 147/331 (44.41%), Postives = 204/331 (61.63%), Query Frame = 1
Query:   10 ILPAGYPEAVNAGYGSYTGWQFTSMVFSSAAGVLSTQALLHAVGLGSGAIPLAAALNWVIKDGLGQLGGVIFSSMVSTRFDANPKLWRMVSALALDASTALELLSPFFPGYFVALASVANVGKNVSFLAASASRAAIHNAFAKRENLADITGKAGSQVIISSMAGMGLGIALAAVVGSEWTYVAPTAAILCFGHLTSTYQCLRPVVLPTIDSQRLELILDAEVATGA-IPQPAAVSAHETIFLHPLRAYLSRHKLPSLVIGAQVSEAICTS-HELQALWD-YATTAVVDNSGVNSSSAQRSACVYLLLLEGATSATVLEGARHAYAVRKAL 993
             LP     +V   Y  Y  W F   + S+A GVLS Q+LL+A+GLG+G+IP AAA+NWV+KDGLGQ GGV+F+S+V+ R+DA+PK WR  SA+ALDA+  +E+L+P  P YF+ +AS+ANV KN+S+L+ASA+RA  HN+FA +ENLAD+T KAGSQ I SS+ G GLGI L+ + G+    V     +L   HL S Y+ L  V L T++SQRL L+    +   A +P    VS  E    H +  Y S +    + +GA +++   +S  EL  L + YA    + N    SSS++ SA V + L + ATS   L    HA   +KAL
Sbjct:   93 FLPKDAKTSVTKDYFPYVQWYFVGSIASAATGVLSMQSLLYAIGLGAGSIPTAAAVNWVLKDGLGQFGGVMFASVVNNRYDADPKRWRTASAVALDAAVLMEILTPLCPAYFLPIASLANVAKNISWLSASATRAGFHNSFAMKENLADVTAKAGSQSIASSILGTGLGIGLSQITGASTLNVLGAFGVLSAFHLFSIYKSLACVTLRTLNSQRLHLVARHFLDNNAQVPDLETVSQQEKFMPHLIVGYASLYDRSYVNMGATLAQLSGSSPDELLRLKEFYANDKYLLNVAFPSSSSKTSARVDVALEDDATSKDALCAQLHAALAQKAL 423          
BLAST of jgi.p|Trimin1|148735 vs. uniprot
Match: A0A1V9YFE1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YFE1_9STRA)

HSP 1 Score: 231 bits (588), Expect = 1.110e-68
Identity = 130/252 (51.59%), Postives = 170/252 (67.46%), Query Frame = 1
Query:   10 ILPAGYPEAVNAGYGSYTGWQFTSMVFSSAAGVLSTQALLHAVGLGSGAIPLAAALNWVIKDGLGQLGGVIFSSMVSTRFDANPKLWRMVSALALDASTALELLSPFFPGYFVALASVANVGKNVSFLAASASRAAIHNAFAKRENLADITGKAGSQVIISSMAGMG--------------LGIALAAVVGSEWTYVAPTAAILCFGHLTSTYQCLRPVVLPTIDSQRLELILDAEVATGAIPQPAAVSAHE 723
             LP  Y  +    Y  Y  WQF   V  +A GVLS Q+LL+A+GL SGAIP+AAALNWVIKDGLGQ GGV+F+S+V+ RFD++PK WR+VSALA+DA+T  E+L+P  P YF+ +A++ANV KN+S+L+ASA+RA  H +FAK ENLADIT KAGSQ I SS+ G G              LGIA++ ++G+  ++VA    +L   +L S Y  L  V L T++ QRL  ILD  +ATG +P P  VSA E
Sbjct:   74 FLPRDYQTSTTKDYLPYAKWQFVGSVAGTACGVLSMQSLLYAIGLQSGAIPMAAALNWVIKDGLGQFGGVLFASLVNHRFDSDPKRWRIVSALAMDAATLTEILTPLCPAYFLPMAAMANVAKNISWLSASATRAGFHYSFAKTENLADITAKAGSQSIASSILGGGAAHGAQFTAAVGTALGIAISPIIGTATSHVAGAFFVLSGINLWSQYNSLCVVSLRTLNQQRLNHILDNYIATGDVPTPETVSAKE 325          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|148735 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YUA2_9STRA1.700e-228100.00Vitamin B6 photo-protection and homoeostasis-domai... [more]
A0A835YMG5_9STRA2.540e-10862.32Vitamin B6 photo-protection and homoeostasis-domai... [more]
D8LJS3_ECTSI1.760e-9449.56Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L0I8_9PHAE2.930e-9249.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
W7TSK4_9STRA3.970e-8849.71Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
T0RLK8_SAPDV1.310e-7246.91Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A6G0WBV7_9STRA2.260e-7147.78Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024TGH2_9STRA6.180e-7143.73Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
K3XB12_GLOUD2.150e-7044.41Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A1V9YFE1_9STRA1.110e-6851.59Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_4contigContig_4:1945376..1946494 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|148735|gw1.4.314.1
Descriptionresponse to UV-B
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGsKOG4249@1|root,KOG4249@2759|Eukaryota
Evalue2.88e-95
Seed ortholog2880.D8LJS3
Hectar predicted targeting categoryother localisation
TranscriptId149057
TrackFilteredModels1
ProteinId148735
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|148735gene_1763Tribonema minus UTEX_B_3156 geneContig_4 1945376..1946494 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_1763_1exon_1763_1Tribonema minus UTEX_B_3156 exonContig_4 1945376..1946225 +
exon_1763_2exon_1763_2Tribonema minus UTEX_B_3156 exonContig_4 1946340..1946494 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_1763CDS_1763Tribonema minus UTEX_B_3156 CDSContig_4 1945376..1946225 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|148735Trimin1|148735|gw1.4.314.1Tribonema minus UTEX_B_3156 polypeptideContig_4 1945376..1946494 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_1763 ID=mRNA_1763|Name=jgi.p|Trimin1|148735|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1005bp|location=Sequence derived from alignment at Contig_4:1945376..1946494+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CTCGCGACCATACTTCCAGCTGGCTATCCTGAGGCTGTCAACGCAGGATA
CGGATCCTACACAGGGTGGCAGTTTACGTCCATGGTCTTCAGCTCTGCCG
CCGGCGTGCTGTCGACACAGGCACTGCTGCATGCAGTAGGGCTTGGCTCT
GGCGCCATCCCGTTGGCTGCAGCGCTAAACTGGGTGATCAAGGACGGGCT
GGGGCAGCTCGGCGGAGTCATATTCTCATCAATGGTGAGCACACGTTTCG
ATGCCAACCCCAAGCTCTGGAGAATGGTCTCCGCGCTGGCGCTGGACGCG
AGCACCGCGCTAGAACTTCTCTCCCCCTTCTTTCCAGGCTACTTCGTGGC
GCTAGCCAGCGTAGCTAATGTAGGGAAGAACGTCTCCTTCCTTGCTGCTA
GCGCCTCACGTGCTGCGATCCACAACGCGTTCGCCAAGCGTGAAAACCTT
GCCGACATCACCGGCAAAGCTGGTTCGCAGGTCATCATCAGTTCCATGGC
GGGCATGGGGCTGGGTATTGCCTTGGCGGCAGTAGTCGGATCCGAGTGGA
CTTACGTGGCCCCTACGGCAGCGATTCTGTGCTTTGGGCACTTGACGTCC
ACGTACCAGTGCCTTCGCCCCGTAGTGCTGCCTACGATAGACTCACAGCG
TTTGGAGCTCATCCTTGATGCTGAGGTAGCCACCGGTGCGATTCCTCAGC
CAGCTGCTGTCAGCGCGCACGAGACAATCTTCTTGCACCCACTGCGTGCA
TACCTCTCACGTCACAAGCTACCAAGCCTTGTGATCGGCGCACAAGTATC
CGAGGCGATTTGCACGTCCCATGAGCTGCAAGCGTTGTGGGACTATGCCA
CGACCGCAGTTGTCGACAACAGCGGCGTGAATAGCAGCAGCGCACAACGC
AGTGCATGTGTGTACTTGCTGCTGCTAGAGGGAGCGACCTCCGCAACAGT
GCTCGAGGGTGCACGACACGCCTATGCTGTGCGCAAAGCACTCGTGGAGC
AGGGG
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protein sequence of jgi.p|Trimin1|148735

>Trimin1|148735|gw1.4.314.1 ID=Trimin1|148735|gw1.4.314.1|Name=jgi.p|Trimin1|148735|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=335bp
LATILPAGYPEAVNAGYGSYTGWQFTSMVFSSAAGVLSTQALLHAVGLGS
GAIPLAAALNWVIKDGLGQLGGVIFSSMVSTRFDANPKLWRMVSALALDA
STALELLSPFFPGYFVALASVANVGKNVSFLAASASRAAIHNAFAKRENL
ADITGKAGSQVIISSMAGMGLGIALAAVVGSEWTYVAPTAAILCFGHLTS
TYQCLRPVVLPTIDSQRLELILDAEVATGAIPQPAAVSAHETIFLHPLRA
YLSRHKLPSLVIGAQVSEAICTSHELQALWDYATTAVVDNSGVNSSSAQR
SACVYLLLLEGATSATVLEGARHAYAVRKALVEQG
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mRNA from alignment at Contig_4:1945376..1946494+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_1763 ID=mRNA_1763|Name=jgi.p|Trimin1|148735|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1119bp|location=Sequence derived from alignment at Contig_4:1945376..1946494+ (Tribonema minus UTEX_B_3156 )
CTCGCGACCATACTTCCAGCTGGCTATCCTGAGGCTGTCAACGCAGGATA CGGATCCTACACAGGGTGGCAGTTTACGTCCATGGTCTTCAGCTCTGCCG CCGGCGTGCTGTCGACACAGGCACTGCTGCATGCAGTAGGGCTTGGCTCT GGCGCCATCCCGTTGGCTGCAGCGCTAAACTGGGTGATCAAGGACGGGCT GGGGCAGCTCGGCGGAGTCATATTCTCATCAATGGTGAGCACACGTTTCG ATGCCAACCCCAAGCTCTGGAGAATGGTCTCCGCGCTGGCGCTGGACGCG AGCACCGCGCTAGAACTTCTCTCCCCCTTCTTTCCAGGCTACTTCGTGGC GCTAGCCAGCGTAGCTAATGTAGGGAAGAACGTCTCCTTCCTTGCTGCTA GCGCCTCACGTGCTGCGATCCACAACGCGTTCGCCAAGCGTGAAAACCTT GCCGACATCACCGGCAAAGCTGGTTCGCAGGTCATCATCAGTTCCATGGC GGGCATGGGGCTGGGTATTGCCTTGGCGGCAGTAGTCGGATCCGAGTGGA CTTACGTGGCCCCTACGGCAGCGATTCTGTGCTTTGGGCACTTGACGTCC ACGTACCAGTGCCTTCGCCCCGTAGTGCTGCCTACGATAGACTCACAGCG TTTGGAGCTCATCCTTGATGCTGAGGTAGCCACCGGTGCGATTCCTCAGC CAGCTGCTGTCAGCGCGCACGAGACAATCTTCTTGCACCCACTGCGTGCA TACCTCTCACGTCACAAGCTACCAAGCCTTGTGATCGGCGCACAAGTATC CGAGGCGATTTGCACGTCCCATGAGCTGCAAGCGTTGTGGGACTATGCCA GTTCAAATGGAGATGCTTACATGATTGCAGTGCGCAGCAATTCAAGCAGC CGCAGCCACAGGCCAAGTGGTGATCAGCAGCAGCGCATGTCTGCAGTCGC GGCCGCAAATAAAGCGACCGCAGTTGTCGACAACAGCGGCGTGAATAGCA GCAGCGCACAACGCAGTGCATGTGTGTACTTGCTGCTGCTAGAGGGAGCG ACCTCCGCAACAGTGCTCGAGGGTGCACGACACGCCTATGCTGTGCGCAA AGCACTCGTGGAGCAGGGG
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Coding sequence (CDS) from alignment at Contig_4:1945376..1946494+

>mRNA_1763 ID=mRNA_1763|Name=jgi.p|Trimin1|148735|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1005bp|location=Sequence derived from alignment at Contig_4:1945376..1946494+ (Tribonema minus UTEX_B_3156 )
CTCGCGACCATACTTCCAGCTGGCTATCCTGAGGCTGTCAACGCAGGATA
CGGATCCTACACAGGGTGGCAGTTTACGTCCATGGTCTTCAGCTCTGCCG
CCGGCGTGCTGTCGACACAGGCACTGCTGCATGCAGTAGGGCTTGGCTCT
GGCGCCATCCCGTTGGCTGCAGCGCTAAACTGGGTGATCAAGGACGGGCT
GGGGCAGCTCGGCGGAGTCATATTCTCATCAATGGTGAGCACACGTTTCG
ATGCCAACCCCAAGCTCTGGAGAATGGTCTCCGCGCTGGCGCTGGACGCG
AGCACCGCGCTAGAACTTCTCTCCCCCTTCTTTCCAGGCTACTTCGTGGC
GCTAGCCAGCGTAGCTAATGTAGGGAAGAACGTCTCCTTCCTTGCTGCTA
GCGCCTCACGTGCTGCGATCCACAACGCGTTCGCCAAGCGTGAAAACCTT
GCCGACATCACCGGCAAAGCTGGTTCGCAGGTCATCATCAGTTCCATGGC
GGGCATGGGGCTGGGTATTGCCTTGGCGGCAGTAGTCGGATCCGAGTGGA
CTTACGTGGCCCCTACGGCAGCGATTCTGTGCTTTGGGCACTTGACGTCC
ACGTACCAGTGCCTTCGCCCCGTAGTGCTGCCTACGATAGACTCACAGCG
TTTGGAGCTCATCCTTGATGCTGAGGTAGCCACCGGTGCGATTCCTCAGC
CAGCTGCTGTCAGCGCGCACGAGACAATCTTCTTGCACCCACTGCGTGCA
TACCTCTCACGTCACAAGCTACCAAGCCTTGTGATCGGCGCACAAGTATC
CGAGGCGATTTGCACGTCCCATGAGCTGCAAGCGTTGTGGGACTATGCCA
CGACCGCAGTTGTCGACAACAGCGGCGTGAATAGCAGCAGCGCACAACGC
AGTGCATGTGTGTACTTGCTGCTGCTAGAGGGAGCGACCTCCGCAACAGT
GCTCGAGGGTGCACGACACGCCTATGCTGTGCGCAAAGCACTCGTGGAGC
AGGGG
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