mRNA_17360 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|354461 vs. uniprot
Match: A0A836CGD8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGD8_9STRA) HSP 1 Score: 994 bits (2571), Expect = 0.000e+0 Identity = 508/508 (100.00%), Postives = 508/508 (100.00%), Query Frame = 1
Query: 1 MSGSRSCKAHATQVAAVLSPRCGNTINLVTPDRESVIIGQDEIRRIFTTAPALASPQLALVRAPGPAAVGLVPFAGAGARGISMDANVFHAFESQRLQHFVESHQRSSEQWNGFIIRITYQPEEFNVPGIHRTVDYFRMFNGNMEFSAYRDRHVSVEDWQQAGWQDADAADPNNPVWQDFPYAEKHNICVRIREAALLCTVVEQAVVIMSCGALAPSFYLFIHLRKGIPSTRDSILAFIAAMKRVKNRFAVKRFWPTLPDPHTGRPASLPKTSLGDLRGEGWALVTSRDGVRTPWPAFNGLEVPESVAAAGFGADNPASVACMTEAATPYVAQAIASGNSQQVLDIIVPLAPGAAQQMLAVWERFYTEHGVEVLQTMLDRYARDAAAEDAYHLRAGKAVAEREKEELRVQHDQLLTEVAQMLAARDELLRKLSIVQLDTSGDNVDFEVEEQLHVDASRVPLNVTAWGDCGSGSDNDLRAGAQRVALAVPAYPGASVDEVGRALQALAA 1524
MSGSRSCKAHATQVAAVLSPRCGNTINLVTPDRESVIIGQDEIRRIFTTAPALASPQLALVRAPGPAAVGLVPFAGAGARGISMDANVFHAFESQRLQHFVESHQRSSEQWNGFIIRITYQPEEFNVPGIHRTVDYFRMFNGNMEFSAYRDRHVSVEDWQQAGWQDADAADPNNPVWQDFPYAEKHNICVRIREAALLCTVVEQAVVIMSCGALAPSFYLFIHLRKGIPSTRDSILAFIAAMKRVKNRFAVKRFWPTLPDPHTGRPASLPKTSLGDLRGEGWALVTSRDGVRTPWPAFNGLEVPESVAAAGFGADNPASVACMTEAATPYVAQAIASGNSQQVLDIIVPLAPGAAQQMLAVWERFYTEHGVEVLQTMLDRYARDAAAEDAYHLRAGKAVAEREKEELRVQHDQLLTEVAQMLAARDELLRKLSIVQLDTSGDNVDFEVEEQLHVDASRVPLNVTAWGDCGSGSDNDLRAGAQRVALAVPAYPGASVDEVGRALQALAA
Sbjct: 1 MSGSRSCKAHATQVAAVLSPRCGNTINLVTPDRESVIIGQDEIRRIFTTAPALASPQLALVRAPGPAAVGLVPFAGAGARGISMDANVFHAFESQRLQHFVESHQRSSEQWNGFIIRITYQPEEFNVPGIHRTVDYFRMFNGNMEFSAYRDRHVSVEDWQQAGWQDADAADPNNPVWQDFPYAEKHNICVRIREAALLCTVVEQAVVIMSCGALAPSFYLFIHLRKGIPSTRDSILAFIAAMKRVKNRFAVKRFWPTLPDPHTGRPASLPKTSLGDLRGEGWALVTSRDGVRTPWPAFNGLEVPESVAAAGFGADNPASVACMTEAATPYVAQAIASGNSQQVLDIIVPLAPGAAQQMLAVWERFYTEHGVEVLQTMLDRYARDAAAEDAYHLRAGKAVAEREKEELRVQHDQLLTEVAQMLAARDELLRKLSIVQLDTSGDNVDFEVEEQLHVDASRVPLNVTAWGDCGSGSDNDLRAGAQRVALAVPAYPGASVDEVGRALQALAA 508
BLAST of jgi.p|Trimin1|354461 vs. uniprot
Match: A0A835YZJ2_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZJ2_9STRA) HSP 1 Score: 696 bits (1795), Expect = 3.630e-250 Identity = 348/350 (99.43%), Postives = 349/350 (99.71%), Query Frame = 1
Query: 250 MDANVFHAFESQRLQHFVESHQRSSEQWNGFIIRITYQPEEFNVPGIHRTVDYFRMFNGNMEFSAYRDRHVSVEDWQQAGWQDADAADPNNPVWQDFPYAEKHNICVRIREAALLCTVVEQAVVIMSCGALAPSFYLFIHLRKGIPSTRDSILAFIAAMKRVKNRFAVKRFWPTLPDPHTGRPASLPKTSLGDLRGEGWALVTSRDGVRTPWPAFNGLEVPESVAAAGFGADNPASVACMTEAATPYVAQAIASGNSQQVLDIIVPLAPGAAQQMLAVWERFYTEHGVEVLQTMLDRYARDAAAEDAYHLRAGKAVAEREKEELRVQHDQLLTEVAQMLAARDELLRKLS 1299
MDANVFHAFESQRLQHFVESHQRSSEQWNGFIIRITYQPEEFNVPGIHRTVDYFRMFNGNMEFSAYRDRHVSVEDWQQAGWQDADAADPNNPVWQDFPYAEKHNICVRIREAALLCTVVEQAVVIMSCGALAPSFYLFIHLRKGIPSTRDSILAFIAAMKRVKNRFAVKRFWPTLPDPHTGRPASLPKTSLGDLRGEGWALVTSRDGVRTPWPAFNGLEVPESVAAAGFGADNPASVACMTEAATPYVAQAIASGNSQQVLDIIVPLAPGAAQQMLAVWERFYTEHGVEVLQTMLDRYARDAAAEDAYHLRAGKAVAEREKEELRVQHDQLLTEVAQM AARDELLRK+S
Sbjct: 1 MDANVFHAFESQRLQHFVESHQRSSEQWNGFIIRITYQPEEFNVPGIHRTVDYFRMFNGNMEFSAYRDRHVSVEDWQQAGWQDADAADPNNPVWQDFPYAEKHNICVRIREAALLCTVVEQAVVIMSCGALAPSFYLFIHLRKGIPSTRDSILAFIAAMKRVKNRFAVKRFWPTLPDPHTGRPASLPKTSLGDLRGEGWALVTSRDGVRTPWPAFNGLEVPESVAAAGFGADNPASVACMTEAATPYVAQAIASGNSQQVLDIIVPLAPGAAQQMLAVWERFYTEHGVEVLQTMLDRYARDAAAEDAYHLRAGKAVAEREKEELRVQHDQLLTEVAQMRAARDELLRKVS 350
BLAST of jgi.p|Trimin1|354461 vs. uniprot
Match: A0A835ZHQ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHQ5_9STRA) HSP 1 Score: 592 bits (1525), Expect = 1.580e-203 Identity = 353/575 (61.39%), Postives = 360/575 (62.61%), Query Frame = 1
Query: 37 QVAAVLSPRCGNTINLVTPDRESVIIGQDEIRRIFTTAPALASPQLALVRAPGPAAVGLVPFAGAGARGISMDANVFHAFESQRLQHFVESHQRSSEQWNGFIIRITYQPEEFNVPGIHRTVDYFRMFNGNMEFSAYRDRHVSVEDWQQAGWQDADAADPNNPVWQDFPYAEKHNICVRIREAALLCTVVEQAVVIMSCGALAPSFYLFIHLRKGIPSTRDSILAFIAAMKRVKNRFAVKRFWPTLPDPHTGRPASLPKTSLGDLRGEGWALVTSRDGVRTPWPAFNGLEVPESVAAAGFGADNPASVACMTEAATPYVAQAIASGNSQQVLDIIVPLAPGAAQQMLAVWERFYTEHGVEVLQTMLDRYARDAAAE--DAYHLRAGKAVAEREKEELRVQHDQLLTEVAQMLAARDELLRK-----------------------------------------------------------------------------LSIVQLDTSGDNVDFEVEEQLHVDASRVPLNVTAWGDCGSGSDNDLRAGAQRVALAVPAYPGASVDEVGRALQALAA 1524
+VAAVLSPRCGNTINLVTPDRESVIIGQDEIRRIFTTAPALASPQLALVRA GPAAVGLVPFAGAGARGISMDANVFHAFESQRLQHFVESHQRSSEQWN FIIRITYQPEEF+VPGIHRTVDYFRMFNGNMEFSAYRDRHVSVEDWQQAGWQDADAADP+NPVWQDFP+AEKH+ICV PESVAAAGFGADNPASVACMTEAATPYVAQAIASGNSQQ MLAVWERFYTEHGVEVLQTMLDRYARDAAAE DA+HLRAGKAVAEREKEELR QHDQLLTEVAQM AARDELLRK IVQLD SGDNVDFEVEEQLHVDASRVPLNVTAWGDCGSGSD+DLRAGAQRVALAVPAYPG SVDEVGRALQALAA
Sbjct: 277 RVAAVLSPRCGNTINLVTPDRESVIIGQDEIRRIFTTAPALASPQLALVRASGPAAVGLVPFAGAGARGISMDANVFHAFESQRLQHFVESHQRSSEQWNSFIIRITYQPEEFHVPGIHRTVDYFRMFNGNMEFSAYRDRHVSVEDWQQAGWQDADAADPDNPVWQDFPHAEKHSICV-----------------------------------------------------------------------------------------------------------------PESVAAAGFGADNPASVACMTEAATPYVAQAIASGNSQQ---------------MLAVWERFYTEHGVEVLQTMLDRYARDAAAEAHDAHHLRAGKAVAEREKEELRFQHDQLLTEVAQMRAARDELLRKPPPPTEDAPGGAVPTARADPPAXXXXXXXXXXXXGNGASTASRAAVLGSXXXXXXXXXXXXXXXXXXXXXXXQQWLARPIVQLDISGDNVDFEVEEQLHVDASRVPLNVTAWGDCGSGSDDDLRAGAQRVALAVPAYPGVSVDEVGRALQALAA 723
BLAST of jgi.p|Trimin1|354461 vs. uniprot
Match: A0A835ZL11_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL11_9STRA) HSP 1 Score: 476 bits (1224), Expect = 3.460e-162 Identity = 312/607 (51.40%), Postives = 319/607 (52.55%), Query Frame = 1
Query: 1 MSGSRSCKAHATQVAAVLSPRCGNTINLVTPDRESVIIGQDEIRRIFTTAPALASPQLALVRAPGPAAVGLVPFAGAGARGISMDANVFHAFESQRLQHFVESHQRSSEQWNGFIIRITYQPEEFNVPGIHRTVDYFRMFNGNMEFSAYRDRHVSVEDWQQAGWQDADAADPNNPVWQDFPYAEKHNICVRIREAALLCTVVEQAVVIMSCGALAPSFYLFIHLRKGIPSTRDSILAFIAAMKRVKNRFAVKRFWPTLPDPHTGRPASLPKTSLGDLRGEGWALVTSRDGVRTPWPAFNGLEVPESVAAAGFGADNPASVACMTEAATPYVAQAIASGNSQQVLDIIVPLAPGAAQQMLAVWERFYTEHGVEVLQTMLDRYARDAAAEDAYHLRAGKAVAEREKEELRVQHDQLLTEVAQMLAARDELLRK---------------------------------------------------------------------------------------------------LSIVQLDTSGDNVDFEVEEQLHVDASRVPLNVTAWGDCGSGSDNDLRAGAQRVALAVPAYPGASVDEVGRALQALAA 1524
MSGSRSCKAHATQVAAVLSPRCGNTINLVTPDRESVIIGQ EIRRIFT APALASPQLALVRA A AG ++FHAFESQRLQHFV+SHQ+SSEQWNGFIIRITYQPEEF+VPGIH TVDYFRMFN AFN LEVPESVAAAGFGADNPASVACMTEAATPYVAQAIASGN QQVLDIIVPLAPGAAQQMLAVWE FYTEHGVEVLQTMLDRY RDAAAEDA+HLR KAVAEREKEELR QHDQLLTEVAQM AARDELLRK LSIVQLD SGDN+DF VEEQLHVDASRVPLNVTAWGDCGSGSDNDLRAGAQRVALAVPAYPG SVDEVGRALQALAA
Sbjct: 1 MSGSRSCKAHATQVAAVLSPRCGNTINLVTPDRESVIIGQGEIRRIFTAAPALASPQLALVRA-----------ARAG-------CDIFHAFESQRLQHFVKSHQQSSEQWNGFIIRITYQPEEFHVPGIHHTVDYFRMFN-----------------------------------------------------------------------------------------------------------------------------------------------------------AFNALEVPESVAAAGFGADNPASVACMTEAATPYVAQAIASGNPQQVLDIIVPLAPGAAQQMLAVWELFYTEHGVEVLQTMLDRYTRDAAAEDAHHLRVRKAVAEREKEELRYQHDQLLTEVAQMRAARDELLRKGAQDDLRPRVHEPPPPTEDAPGGAVPTARADPPAAVPSANIGVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAQQWLARPLPAPRRRKLSIVQLDISGDNIDFAVEEQLHVDASRVPLNVTAWGDCGSGSDNDLRAGAQRVALAVPAYPGVSVDEVGRALQALAA 434
BLAST of jgi.p|Trimin1|354461 vs. uniprot
Match: A0A835Z5E7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5E7_9STRA) HSP 1 Score: 387 bits (995), Expect = 2.060e-122 Identity = 198/217 (91.24%), Postives = 206/217 (94.93%), Query Frame = 1
Query: 673 RKGIPSTRDSILAFIAAMKRVKNRFAVKRFWPTLPDPHTGRPASLPKTSLGDLRGEGWALVTSRDGVRTPWPAFNGLEVPESVAAAGFGADNPASVACMTEAATPYVAQAIASGNSQQVLDIIVPLAPGAAQQMLAVWERFYTEHGVEVLQTMLDRYARDAAAEDAYHLRAGKAVAEREKEELRVQHDQLLTEVAQMLAARDELLRKLSIVQLDTSG 1323
RKGIPSTRDSILAFIAAMKRVKNRFAVKRFWPTLPDPHTGRPASLPKTSLGDLRGEGWAL TSRDGVRTPWPAFNGLEVPESVAAAGFGADNPASVACMTEAATPYVAQAIASG+ QQVLDIIVPLAPGAAQQMLAVWERFYTEHGV VLQ MLDRYARDAAA+DA+HLRAGKA AEREKEELR+QHDQLLTEVAQM AARDEL RK+S + +T+
Sbjct: 542 RKGIPSTRDSILAFIAAMKRVKNRFAVKRFWPTLPDPHTGRPASLPKTSLGDLRGEGWALATSRDGVRTPWPAFNGLEVPESVAAAGFGADNPASVACMTEAATPYVAQAIASGSPQQVLDIIVPLAPGAAQQMLAVWERFYTEHGVAVLQKMLDRYARDAAADDAHHLRAGKAAAEREKEELRLQHDQLLTEVAQMRAARDELSRKVSAEKTETAA 758
BLAST of jgi.p|Trimin1|354461 vs. uniprot
Match: A0A835Z4D7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4D7_9STRA) HSP 1 Score: 384 bits (985), Expect = 5.320e-122 Identity = 212/434 (48.85%), Postives = 292/434 (67.28%), Query Frame = 1
Query: 10 SRSCKAHATQVAAVLSPRCGNTINLVTPDRESVIIGQDEIRRIFTTAPA-LASPQLALV---RAPGPAAVGLVPFAGAGARGISMDANVFHAFESQRLQHFVESHQRSSEQWNGFIIRITYQPEEFNV---PGIHRTVDYFRMFNGNMEFSAYRDRHVSVEDWQQAGWQDADAADPNNPVWQDFPYAEKHNICVRIREAALLCTVVEQAVVIMSC---GALAPSFYLFIHLRKGIPSTRDSILAFIAAMKRVKNRFAVKRFWPTLPDPHTGRPASLPKTSLGDLRGEGWALVTSRDGVRTPWPAFNGLEVPESVAAAGFGADNPASVACMTEAATPYVAQAIASGNSQQVLDIIVPLAPGAAQQMLAVWERFYTEHGVEVLQTMLDRYARDAAAEDAYHLRAGKAVAEREKEELRVQHDQLLTEVAQMLAARDE 1281
SRSC+AH +VA L +CG+T++LV P++++ IIGQ+EIRRIF TAPA +A+P ++L+ RAPG A +VP + GA +S+D +++ AF SQRL F++++QR +QWNG+II++ Y P F + + V YFR +G EF+ H+S GW A++ P+NP+WQ+FP+A+KHNIC RIRE LLC+VV A V++S LAP FYLF+HL+ G TRD I++F+A MK+V RF V+ F LP +G S+PK S+GDL EGW +VT + GVRTPWPA + +EVP+ VAA GFG DN A + C+TEAAT VA AI G+ QQV D IV LAPGA QQ LAV + + EHG +VL+ +L RYA DAA E+A LRAG A A+RE EEL++QH +++V ++ A + +
Sbjct: 222 SRSCRAHYQEVATKLRAQCGDTVSLVQPEQDNRIIGQEEIRRIFATAPAAIAAPMVSLLPLSRAPGVADGAMVPVSMRGATSMSLDPDLYQAFNSQRLHEFMDNNQRPQKQWNGYIIKVYYTPLLFQLRLPDNQFQRVSYFRTTSGEPEFTTAE--HLSDHATSCEGWHVAESHSPSNPMWQEFPHADKHNICARIRETTLLCSVVGAAAVVISSRRDSVLAPDFYLFVHLKNGCRPTRDGIISFLATMKKVSGRFRVRLFHTHLPSARSGYRYSVPKDSMGDLCDEGWLMVTDQGGVRTPWPAASDVEVPQVVAARGFGLDNAAMLGCITEAATCNVAHAIKYGSEQQVCDAIVALAPGAPQQALAVLKHLFVEHGADVLEKVLGRYACDAAKEEAEQLRAGIAAAKREAEELQIQHSINISDVGKLRARQHQ 653
BLAST of jgi.p|Trimin1|354461 vs. uniprot
Match: A0A835Z4Z3_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Z3_9STRA) HSP 1 Score: 369 bits (947), Expect = 2.990e-115 Identity = 207/400 (51.75%), Postives = 266/400 (66.50%), Query Frame = 1
Query: 10 SRSCKAHATQVAAVLSPRCGNTINLVTPDRESVIIGQDEIRRIFTTAPALASPQLALV---RAPGPAAVGLVPFAGAGARGISMDANVFHAFESQRLQHFVESHQRSSEQWNGFIIRITYQPEEFNVP----GIHRTVDYFRMFNGNMEFSAYRDRHVSVEDWQQAGWQDADAADPNNPVWQDFPYAEKHNICVRIREAALLCTVVEQAVVIMSCG-ALAPSFYLFIHLRKGIPSTRDSILAFIAAMKRVKNRFAVKRFWPTLPDPHTGRPASLPKTSLGDLRGEGWALVTSRDGVRTPWPAFNGLEVPESVAAAGFGADNPASVACMTEAATPYVAQAIASGNSQQVLDIIVPLAPGAAQQMLAVWERFYTEHGVEVLQTMLDRYARDAAAEDAYHLRA 1185
SRSC+AH +AA L+ + +T++LV P+R S+IIGQD+IRR+F APA A+P ++L+ RAPG A +VP A IS+D +VFHAF +QRL F+E++QR EQW G+IIRI Y+P +F V +H + + +GN EF + E Q GW ADA D NNP+W++FP+A+K IC RIREAALLCTVV A V+MS LAPSFYLF LRKG TRD I++FI +MK++ +F VKRF +LP TG +SLPK S+GDL W LVT GVRTPWPA + EVPE++AA GFG DN A + C+ EAAT +VA AI + QQV +I+V L PG +QQ LAV +R YT HG EVL+ +L +YA DAA EDA LRA
Sbjct: 325 SRSCRAHCRDIAANLTAQSSDTVSLVQPERNSMIIGQDKIRRLFGPAPATAAPMVSLLPLSRAPGVAEGAMVPVAAGRVPSISLDPDVFHAFNNQRLHQFMENNQRLQEQWAGYIIRIDYRPLQFLVRLPDNQVHEALYFKASADGNTEFIT-NNHGRGREGLMQEGWHIADADDHNNPIWREFPHADKQKICARIREAALLCTVVGAAAVVMSTREVLAPSFYLFAQLRKGCKPTRDGIVSFIDSMKKMSWQFYVKRFHSSLPFARTGYRSSLPKDSMGDLHNSRWTLVTGCGGVRTPWPAASDFEVPEAIAAGGFGVDNAAMLCCIREAATRHVAHAIKHCSEQQVSEIVVTLGPGTSQQALAVLQRLYTAHGAEVLEKVLGKYAHDAAKEDADRLRA 723
BLAST of jgi.p|Trimin1|354461 vs. uniprot
Match: A0A836CHA2_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHA2_9STRA) HSP 1 Score: 353 bits (906), Expect = 2.410e-104 Identity = 200/391 (51.15%), Postives = 258/391 (65.98%), Query Frame = 1
Query: 61 RCGNTINLVTPDRESVIIGQDEIRRIFTTAPALASPQLALV---RAPGPAAVGLVPFAGAGARGISMDANVFHAFESQRLQHFVESHQRSSEQWNGFIIRITYQPEEFNVP----GIHRTVDYFRMFNGNMEFSAYRDRHVSVEDWQQAGWQDADAADPNNPVWQDFPYAEKHNICVRIREAALLCTVVEQAVVIMSCG-ALAPSFYLFIHLRKGIPSTRDSILAFIAAMKRVKNRFAVKRFWPTLPDPHTGRPASLPKTSLGDLRGEGWALVTSRDGVRTPWPAFNGLEVPESVAAAGFGADNPASVACMTEAATPYVAQAIASGNSQQVLDIIVPLAPGAAQQMLAVWERFYTEHGVEVLQTMLDRYARDAAAEDAYHLRAGKAVAERE 1209
R G+T+ +V P+R S+IIGQD+IRR+F APA A+P ++L+ RAPG A +VP A IS+D +VFHAF +QRL F+E++QR EQW G+IIRI Y+P +F V +H + + +GN EF + E Q GW ADA D NNP+W++FP+A+K IC RIREAALLCTVV A V+MS LAPSFYLF LRKG TRD I++FI +MK++ +F VKRF +LP TG +SLPK S+G+L W LVT GVRTPWPA + EVPE++AA GFG DN A + C+ EAAT +VA I + QQV +I+V L PG +QQ LAV +R YT HG EVL+ +L +YA DAA EDA LRA A A++E
Sbjct: 1627 RSGDTVRVVQPERNSMIIGQDKIRRLFGPAPATAAPMVSLLPLSRAPGVAERAMVPVAAERVPSISLDPDVFHAFNNQRLHQFMENNQRLQEQWAGYIIRIDYRPLQFLVRLPDNQVHEALYFKASADGNTEFIT-NNHGRGREGLLQEGWHIADADDHNNPIWREFPHADKQKICARIREAALLCTVVGAAAVVMSTREVLAPSFYLFAQLRKGCKPTRDGIVSFIDSMKKMSWQFYVKRFHSSLPFARTGYRSSLPKDSMGNLHNSRWTLVTGCGGVRTPWPAASDFEVPEAIAAGGFGVDNAAMLCCIREAATRHVAHTIKHCSEQQVSEIVVTLGPGTSQQALAVLQRLYTAHGAEVLEKVLGKYAHDAAKEDADRLRAEVAAAKQE 2016
BLAST of jgi.p|Trimin1|354461 vs. uniprot
Match: A0A835ZC30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC30_9STRA) HSP 1 Score: 284 bits (726), Expect = 2.290e-85 Identity = 185/441 (41.95%), Postives = 248/441 (56.24%), Query Frame = 1
Query: 13 RSCKAHATQVAAVL-SPRCGNTINLVTPDRESVIIGQDEIRRIFTTAPALASPQLALVRAPGPAAVGLVPFA---GAGARGISMDANVFHAFES--QRLQHFVESHQ-RSSEQWNGFIIRITYQPEEFN--VP--GIHRTVDYFRMFNGNMEFSAYRDRHVSVEDWQQAGWQDADAADPNNPVWQDFPYAEKHNICVRIREAALLCTVVEQAVVIMSC--GALAPSFYLFIHLRKGIPSTRDSILAFIAAMKRVKNRFAVKRFWPTLPDPHTGRPASLPKTSLGDLRGEGWALVTSRDGVRTPWPAFNGLEVPESVAAAGFGADNPASVACMTEAATPYVAQAIASGNSQQVLDIIVPLAPGAAQQMLAVWERFYTEHGVEVLQTMLDRYARDAAAEDAYHLRAGKAVAEREKEELRVQHDQLLTEVAQMLAARDELLRKL 1296
RSC+AH ++AA L + G+TI LV P+ S+I GQ+EIRR+F A A QL+LV P AA LVPFA A IS+D +VF AF + RLQ FV + Q R +QW G+I++I Y P F +P +H V Y + F R + ++ GW A+ D NP WQ FP+A+ IC RIR ALLC VV+ A V M+ GALAPSF+LF+HL G TRD + +F + M R+ + FAV+ F +LP TG SLPK G++ + W ++T+ GVRT WP + +E+P V GFG +N A ++ + EAA +VA AI G Q V I+ LA GA QQ LA + YT+HG +VLQ +LDR AR+AA ED LRA AE +++ + LT + M A E R L
Sbjct: 56 RSCRAHYKEIAAALRQQQVGDTITLVQPEASSMIAGQNEIRRLFPPAAA----QLSLVPVPATAAGTLVPFAQGTAATVARISVDPDVFQAFNNGYPRLQQFVANQQQRLPQQWGGYIVQINYHPLLFQKRLPDNSLH-DVAYVKTTGSGTYFIFSEHRLTDLRHQEEEGWSVAEVEDARNPSWQLFPHADTQTICARIRTTALLCNVVDAAAVAMATRSGALAPSFFLFVHLGGGCKPTRDGLKSFFSTMGRMSSSFAVQHFHTSLPRASTGNRMSLPKDHSGNVYTDRWTIITNNAGVRTLWPVVSDIELPGHVVQGGFGLNNSAMLSHIMEAAATHVAHAITHGGEQDVRQIVSTLASGAPQQALATMQHIYTQHGTDVLQKVLDRRAREAAEEDTQRLRASVEAAEATAADMQDVQSRWLTRLEDMRAEHLEESRSL 491
BLAST of jgi.p|Trimin1|354461 vs. uniprot
Match: A0A835YYR3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYR3_9STRA) HSP 1 Score: 191 bits (484), Expect = 1.670e-55 Identity = 101/109 (92.66%), Postives = 104/109 (95.41%), Query Frame = 1
Query: 967 MTEAATPYVAQAIASGNSQQVLDIIVPLAPGAAQQMLAVWERFYTEHGVEVLQTMLDRYARDAAAEDAYHLRAGKAVAEREKEELRVQHDQLLTEVAQMLAARDELLRK 1293
MTEAATPYVAQAIASG+ QQVLDIIVPLAPGAAQQMLAVWERFYTEHGVEVLQ MLDRYARDAAAEDA+HLRAGKA AEREKEELR+QHDQLLTEVAQM AARDEL RK
Sbjct: 1 MTEAATPYVAQAIASGSPQQVLDIIVPLAPGAAQQMLAVWERFYTEHGVEVLQKMLDRYARDAAAEDAHHLRAGKAAAEREKEELRLQHDQLLTEVAQMRAARDELSRK 109 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354461 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_17360 ID=mRNA_17360|Name=jgi.p|Trimin1|354461|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1527bp|location=Sequence derived from alignment at Contig_252:13865..18878- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCTGGCAGTCGCAGCTGCAAGGCACACGCTACACAGGTGGCTGCGGTback to top protein sequence of jgi.p|Trimin1|354461 >Trimin1|354461|estExt_Genemark1.C_Ctg_2520002 ID=Trimin1|354461|estExt_Genemark1.C_Ctg_2520002|Name=jgi.p|Trimin1|354461|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=509bp MSGSRSCKAHATQVAAVLSPRCGNTINLVTPDRESVIIGQDEIRRIFTTAback to top mRNA from alignment at Contig_252:13865..18878- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_17360 ID=mRNA_17360|Name=jgi.p|Trimin1|354461|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5014bp|location=Sequence derived from alignment at Contig_252:13865..18878- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_252:13865..18878- >mRNA_17360 ID=mRNA_17360|Name=jgi.p|Trimin1|354461|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1527bp|location=Sequence derived from alignment at Contig_252:13865..18878- (Tribonema minus UTEX_B_3156 )back to top |