mRNA_17318 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Match: A0A835Z2V8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2V8_9STRA) HSP 1 Score: 1082 bits (2798), Expect = 0.000e+0 Identity = 529/529 (100.00%), Postives = 529/529 (100.00%), Query Frame = 1 Query: 1 STAAVVQHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGLGDIFPKATLYSIAEQALVDMAQHVASVARLGQNSGLMIGWSAPWQLLYRSSVHGATAQEFHRLCDGKPNTVCLAVDDRGHVFGGFTSVGWATGTSYQLDPAAFLFCQPDRGDSSVKQRYSPKGFFPQFALYHSDDWPRFGSSDLWFKSAAETLMYSSSSTSFQPMPINGVNDGTVIDLLIWQVPLTDGSAQPVPPPRSDNTILSQEVMTRAATTLNLFSLWLKEQLGACDSELQAIQRRAELFASERAFMQQLNTALPPDDMDTRKNAWLEQVCTSIYVCTRCHLSVSPKACAVYRLRGVHNGIVYIACSGTGQLCTMRDTFTQFGDTPLANKYASDVWGGNVEVELDEEGCVFEDHNQECFDKLVNVMRLRAIVRRTGFSGTIGSSKPAPMPAHLAPTMTNMLEYLMIDSKHFFSSL 1587 STAAVVQHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGLGDIFPKATLYSIAEQALVDMAQHVASVARLGQNSGLMIGWSAPWQLLYRSSVHGATAQEFHRLCDGKPNTVCLAVDDRGHVFGGFTSVGWATGTSYQLDPAAFLFCQPDRGDSSVKQRYSPKGFFPQFALYHSDDWPRFGSSDLWFKSAAETLMYSSSSTSFQPMPINGVNDGTVIDLLIWQVPLTDGSAQPVPPPRSDNTILSQEVMTRAATTLNLFSLWLKEQLGACDSELQAIQRRAELFASERAFMQQLNTALPPDDMDTRKNAWLEQVCTSIYVCTRCHLSVSPKACAVYRLRGVHNGIVYIACSGTGQLCTMRDTFTQFGDTPLANKYASDVWGGNVEVELDEEGCVFEDHNQECFDKLVNVMRLRAIVRRTGFSGTIGSSKPAPMPAHLAPTMTNMLEYLMIDSKHFFSSL Sbjct: 1 STAAVVQHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGLGDIFPKATLYSIAEQALVDMAQHVASVARLGQNSGLMIGWSAPWQLLYRSSVHGATAQEFHRLCDGKPNTVCLAVDDRGHVFGGFTSVGWATGTSYQLDPAAFLFCQPDRGDSSVKQRYSPKGFFPQFALYHSDDWPRFGSSDLWFKSAAETLMYSSSSTSFQPMPINGVNDGTVIDLLIWQVPLTDGSAQPVPPPRSDNTILSQEVMTRAATTLNLFSLWLKEQLGACDSELQAIQRRAELFASERAFMQQLNTALPPDDMDTRKNAWLEQVCTSIYVCTRCHLSVSPKACAVYRLRGVHNGIVYIACSGTGQLCTMRDTFTQFGDTPLANKYASDVWGGNVEVELDEEGCVFEDHNQECFDKLVNVMRLRAIVRRTGFSGTIGSSKPAPMPAHLAPTMTNMLEYLMIDSKHFFSSL 529
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Match: A0A835Z1Y2_9STRA (TLDc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Y2_9STRA) HSP 1 Score: 663 bits (1710), Expect = 1.130e-233 Identity = 350/554 (63.18%), Postives = 407/554 (73.47%), Query Frame = 1 Query: 1 STAAVVQHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGLGDIFPKAT--LYSIAEQALVDMAQHVASVARLGQNSGLMIGWSAPWQLLYRSSVHGATAQEFHRLCDGKPNTVCLAVDDRGHVFGGFTSVGWATGT-SYQLDPAAFLFCQPDRGDSSVKQRYSPKGFFPQFALYH-SDDWPRFG-SSDLWFKSAAE-TLMYSSSSTSFQPMPINGVNDGTVIDLLIWQVPLTDGSAQPVPPPRSDNTILSQEV------------------MTRAATTLNL-FSLWLKEQLGACDSELQAIQRRAELFASERAFMQQLNTALPPDDMDTRKNAWLEQVCTSIYVCTRCHLSVSPKACAVYRLRGVHNGIVYIACSGTGQLCTMRDTFTQFGDTPLANKYASDVWGGNVEVELDEEGCVFEDHNQECFDKLVNVMRLRAIVRRTGFSGTIGSSKPAPMPAHLAPTMTNMLEYLMIDSKHFFSSL 1587 + AV+Q YKPP+LL LNVGGAKL VKRSALT DSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPIT+YLS+LSRG AAD VHLP+T LSDDDKLG++ACAE++GL I + +A QAL ++ QH+ASVARLG+ + L IGWSAPWQLLY+SS HGAT QEFHRLC KPNT+CLA DD+G+VFGGFT+V + S+Q DPAAFLFC+ +S+ QRY G PQ A+ H S P FG +DL F ++E + Y S++ ++QPMPING + G V+ L +WQVP T SA P P +D + Q +T ATTL+ F LWLKEQL ACDSEL+A+ RRA+LF SE AFMQQ+N L P+D+D RK AWLE+VC + + P RL+G+HNGIVYIAC GTGQLCTMR+TFTQFG TPLANKYASDVWGG VEVELDEEGCVFEDHNQECF KL NVMRLR+IVRR FSGTIGSSKPAPMPAHL TMTNMLEYLMIDS+ FFSSL Sbjct: 7 ANGAVLQDYKPPSLLTLNVGGAKLLVKRSALTLFDDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITEYLSELSRGAAADDVHLPLTQLSDDDKLGVQACAEMFGLCPILARELDPRLFLARQALANVTQHIASVARLGEETKLKIGWSAPWQLLYQSSAHGATPQEFHRLCAHKPNTICLATDDKGNVFGGFTTVARTSSPGSWQPDPAAFLFCKGS--NSTAMQRYCQTGTSPQHAVLHKSSHGPIFGVGNDLQFAFSSEGAIAYCSATRTYQPMPINGTSGGKVVYLFVWQVPQTGDSAPPSLTPNADAAVSCQPAPSLSYITSPVALRADMSSLTDPATTLSFHFGLWLKEQLDACDSELRAVDRRAKLFTSEMAFMQQVNATLSPEDLDGRKRAWLEKVCIQTAMPSESDPPAPPT-----RLKGIHNGIVYIACRGTGQLCTMRETFTQFGATPLANKYASDVWGGIVEVELDEEGCVFEDHNQECFHKLANVMRLRSIVRRPDFSGTIGSSKPAPMPAHLTATMTNMLEYLMIDSEQFFSSL 553
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Match: A0A835YZL9_9STRA (TLDc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZL9_9STRA) HSP 1 Score: 623 bits (1607), Expect = 4.520e-218 Identity = 337/555 (60.72%), Postives = 405/555 (72.97%), Query Frame = 1 Query: 10 AVVQHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGLGDIFPKATLYS--IAEQALVDMAQHVASVARLGQNSGLMIGWSAPWQLLYRSSVHGATAQEFHRLCDGKPNTVCLAVDDRGHVFGGFTSVGWATGTSYQLDPAAFLFCQPDRGDSSVKQRYSPKGFFPQFAL-YHSDDWPRFGSS-DLWFKSA-AETLMYSSSSTSFQPMPINGVNDGTVIDLLIWQVPLTDGSAQPVPPPRSDNTILSQEV---------------------MTRAATTLNL-FSLWLKEQLGACDSELQAIQRRAELFASERAFMQQLNTALPPDDMDTRKNAWLEQVCTSIYVCTRCHLSVSPKACAVYRLRGVHNGIVYIACSGTGQLCTMRDTFTQFGD-TPLANKYASDVWGGNVE-VELDEEGCVFEDHNQECFDKLVNVMRLRAIVRRTGFSGTIGSSKPAPMPAHLAPTMTNMLEYLMIDSKHFFSSL 1587 AV+Q Y+PP++LILNVGGAKLRVKRSALTHV DSKLAWMFSGRWDHVLPR+HSGR FLDLDVKWFSPIT +LSKLS G AAD V LP++ LSDDDKLG++ACAE++GL I + + +QAL ++AQHVASVA LGQ S ++GWSAPWQLLY+SSVHGATAQEFHRLCD KP+T+CLA+D+ G++FGG+TSV W + +Q DPAAFLF + RG +++ Q YS KG P+ ++ +HS WP FG DL FKS+ A T+ YSSSS ++ MPING + GTVIDL +WQVP T GSA +D+T+L+Q +T AT L+ F LWLKEQL EL+A++ R ELFASE+ FMQQL A+ PDD++ RK AWLE+V T + CT P A L+GVH+GIVYI C GTGQLCTMR+TFTQ GD TPLA KYASDVW N+E LDE+GCV EDHN ECF KLVNVMRLRA+VRR FS T+GSSKPAPMPAHLA M +MLEYLMIDS+ FF +L Sbjct: 6 AVLQEYQPPSVLILNVGGAKLRVKRSALTHVDDSKLAWMFSGRWDHVLPRNHSGRKFLDLDVKWFSPITDFLSKLSSGAAADEVRLPVSQLSDDDKLGVQACAEMFGLCHILARELNLRPLLVQQALANLAQHVASVAHLGQESKRVVGWSAPWQLLYQSSVHGATAQEFHRLCDCKPHTICLAIDNEGNMFGGYTSVAWTSSDGWQADPAAFLFYE-GRGSAAL-QCYSQKGTSPEHSIRHHSSLWPTFGGGHDLRFKSSSAGTITYSSSSKTYHTMPINGTS-GTVIDLFVWQVPQTGGSAPAATD--ADDTVLNQPACRLSYTSDSTPPVAFRADLSSLTGPATALSFRFGLWLKEQLDMYAIELRAVKHRTELFASEKTFMQQLIAAMSPDDVNGRKRAWLEKVRT--HNCTHSTGGTDPPA-TPSPLKGVHHGIVYITCWGTGQLCTMRETFTQLGDETPLAKKYASDVWAANIESAALDEDGCVIEDHNAECFQKLVNVMRLRAMVRRPDFSSTVGSSKPAPMPAHLARAMASMLEYLMIDSEQFFGTL 552
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Match: A0A835YMH1_9STRA (TLDc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMH1_9STRA) HSP 1 Score: 585 bits (1507), Expect = 1.890e-203 Identity = 316/538 (58.74%), Postives = 389/538 (72.30%), Query Frame = 1 Query: 13 VVQHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGLGDIFPKATLYSIAEQALVDMAQHVASVARLGQNSGLMIGWSAPWQLLYRSSVHGATAQEFHRLCDGKPNTVCLAVDDRGHVFGGFTSVGWATGTSYQLDPAAFLFCQPDRGDSSVKQRYSPKGFFPQFALYHSDDW-PRFGSS-DLWFKSAAET---LMYSSSSTSFQPMPINGVNDGTVIDLLIWQVPLTDGSA-----QPVPPPRSDNTILSQEVMTRAATTLNL-FSLWLKEQLGACDSELQAIQRRAELFASERAFMQQLNTALPPDDMDTRKNAWLEQVCTSIYVCTRCHLSVSPKACAVYR-LRGVHNGIVYIACSGTGQLCTMRDTFTQFGDTPLANKYASDVWGGNVEVE-LDEEGCVFEDHNQECFDKLVNVMRLRAIVRRTGFSGTIGSSKPAPMPAHLAPTMTNMLEYLMIDSKHFFSSL 1587 ++Q YKP +L LN+GGAKLR+KRSALTH++DSKLAWMFSGRWDHVLPRDH GRIFLDLD+ WF PIT +LS+LS+ AAD +LPI SDDD+LGL+AC EL+GL D SI Q L M QH+ASVARLGQ SGL IGWSAPWQLLY++SV+GA A+EFH CDGKP+T+CLA+D+ G++ GGFTSV W + +Y+ DPAAFLF + +S QRYS G PQ+A+ H+ + P FG D F + + + YSSS+ ++QPMPING + GTV DL +WQVP GSA PP +S +T AT+L+ F LWLKEQL A DSELQAI+R+A+LFA+E+AFMQQL P+D+D+RK AWLE+V T + R H ++ +A A LRGVHNGIVY+AC G GQLCTMR+ F QFG + LANKYASDVW N+ LDE+GC+ E+H+ ECF KLVNVMRLRAIVRR FSGT+GSSKPAPMPAHLAP MT MLEYLMI+ + F++L Sbjct: 1 LMQDYKPTEVLTLNIGGAKLRLKRSALTHIEDSKLAWMFSGRWDHVLPRDHLGRIFLDLDINWFRPITDFLSELSQSAAADEAYLPIMQRSDDDRLGLQACVELFGLCD--------SIPAQGLAGMPQHIASVARLGQESGLKIGWSAPWQLLYQASVNGAKAREFHSWCDGKPHTLCLAMDNEGNILGGFTSVPWESSGTYKRDPAAFLFFKGV--ESPATQRYSQTGNSPQWAVIHNSGYGPAFGGGRDFAFTFSRQPEGGMTYSSSANTYQPMPINGTS-GTVSDLFVWQVPQIGGSAPFNYSSDSTPPLELRADMSS--LTGPATSLSFHFGLWLKEQLDAYDSELQAIERQAKLFAAEKAFMQQL----APEDIDSRKRAWLEKVGTYV----RVHSVLTSRASAPPSPLRGVHNGIVYMACWGGGQLCTMREMFKQFGRSMLANKYASDVWARNIRAAALDEDGCIVENHHHECFQKLVNVMRLRAIVRRPAFSGTVGSSKPAPMPAHLAPAMTKMLEYLMINHEQCFNAL 517
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Match: A0A835YTK3_9STRA (TLDc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK3_9STRA) HSP 1 Score: 551 bits (1419), Expect = 5.010e-189 Identity = 317/558 (56.81%), Postives = 381/558 (68.28%), Query Frame = 1 Query: 25 YKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGLGDIFPKATLYSIAEQALVDMAQHVASVARLGQNSGLMIGWSAPWQLLYRSSVHGATAQEFHRLCDGKPNTVCLAVDDRGHVFGGFTSVGWATGTS--YQLDPAAFLFCQPDRGDSSVKQRYSPKGFFPQFALYHSDDW-PRFGSS-DLWFKSAAETLMYSSSSTSFQPMPINGVNDGTVIDLLIWQVPLTDGSA--QPVPPPRSDNTILSQEV---------------------MTRAATTLNL-FSLWLKEQLGACDSELQAIQRRAELFASERAFMQQLNTALPPDDMDTRKNAWLEQVCTSIYVCTRCHLS----VSPKACAVYRLRGVHNGIVYIACSGTGQLCTMRDTFTQFGDTPLANKYASDVWGGNVEVE-LDEEGCVFEDHNQECFDKLVNVMRLRAIV--RRTGFSGTIGSSKPAPMPAHLAPTM--TNMLEYLMIDSKHFFSSL 1587 Y PP +L LNVGGAKL +KRSA+ +V+DSKLAWMF+GRWDHVLPRDHSGRIFLDLD+ WF PIT +LS+LS+G A +LPI L DDD++G++AC EL+GL DI + S V + QHV SVA LGQ SGL IGWSAPWQLLY+SSV+GA A +FHRLCDGKPNTV LAVD++G+VFGG +V WA+ +S +Q D AAFLF + S+ QRYS Q A++H + P FG+ DL F T+ ++SS+ SFQP+PI G + GTVIDL +WQVP T GSA + P PR+D T Q V +T ATTL+ F LWLKEQL A D+ELQA++RRAELFA+E+AF+QQL P+D+D RK AWLE+V T I V S + P A L+GVHNGIVYI C G GQLCTMR+TF QFG + LANKYASDVW NV LD++GCV EDHN ECF KLVNVMRLRAIV RR GFSGTIGS+KP+ MPAHLA M T ML YL ID + F S+L Sbjct: 47 YNPPEVLTLNVGGAKLLLKRSAMAYVEDSKLAWMFNGRWDHVLPRDHSGRIFLDLDINWFRPITNFLSELSQGAEAGVAYLPIMQLMDDDRVGVQACMELFGLCDIVSAQGIAS------VPLTQHVTSVAHLGQESGLEIGWSAPWQLLYQSSVNGAIAHDFHRLCDGKPNTVSLAVDEKGNVFGGLATVAWASHSSRSWQPDRAAFLFYEGS--GSTAMQRYSQARNNIQSAVFHHSSYGPVFGNGYDLVFTFIGGTITHTSSTQSFQPLPIKGTS-GTVIDLFVWQVPQTGGSAPLKLSPSPRADATASRQPVCNLSYNSDSAPPLKLRADMSSLTGPATTLSFHFGLWLKEQLDAFDNELQAVERRAELFAAEKAFLQQL----APEDIDGRKRAWLEKVGTYIRVHNANMKSLGGDIHPPA-PPSPLKGVHNGIVYITCWGGGQLCTMRETFKQFGRSMLANKYASDVWARNVRAAALDDDGCVVEDHNHECFQKLVNVMRLRAIVTVRRPGFSGTIGSAKPSHMPAHLALAMSVTEMLNYLAIDHEQFVSAL 590
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Match: A0A835Z9G2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G2_9STRA) HSP 1 Score: 353 bits (905), Expect = 3.510e-114 Identity = 190/327 (58.10%), Postives = 227/327 (69.42%), Query Frame = 1 Query: 4 TAAVVQHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGLGDIFPKATLYSIAEQALVDMAQHVASVARLGQNSGLMIGWSAPWQLLYRSSVHGATAQEFHRLCDGKPNTVCLAVDDRGHVFGGFTSVGWATGT-SYQLDPAAFLFCQPDRGDSSVKQRYSPKGFFPQFAL-YHSDDWPRFGSS-DLWF---------KSAAETLMYSSSSTSFQPMPINGVNDGTVIDLLIWQVPLTDGSAQPVPPPRSDNTILSQ 948 TA V+Q Y+PP+LL+LNVGGAKLRVKRSALTHVKDSKLAWMF+GRWDH LPRDHSG IFLD+DVKWFSPI +YLS+LSRG AA+ +LPI LSDDD+LG RAC EL+GL DI PK QA AQ +ASVA G SGL + WSA WQLL +SS H AT QEFHRL G+PNTVCLA+DD G+VFGGFTS W G+ +Y+ DPAAFLFC+ DS + YS G +PQ A+ +HS P FG DL F S+AE + Y SS++++ PMPI+G DGTV+D +WQVP +A P P D + Q Sbjct: 58 TATVLQDYEPPSLLVLNVGGAKLRVKRSALTHVKDSKLAWMFNGRWDHWLPRDHSGHIFLDVDVKWFSPIAEYLSELSRGTAANEAYLPIMQLSDDDRLGFRACVELFGLRDIMPK--------QAFDSQAQVLASVACFGLESGLNLAWSALWQLLCQSSAHDATTQEFHRLYYGRPNTVCLAIDDEGNVFGGFTSEAWIAGSGTYKPDPAAFLFCKTS--DSPTTRCYSQTGSYPQCAVCHHSSVGPLFGGGHDLQFIFSSAGAVAYSSAEAITYRSSASAYHPMPISGT-DGTVVDFFVWQVPQAGATAPPSLTPNFDAAVPRQ 373
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Match: A0A835YIU4_9STRA (TLDc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIU4_9STRA) HSP 1 Score: 306 bits (785), Expect = 4.650e-98 Identity = 154/243 (63.37%), Postives = 176/243 (72.43%), Query Frame = 1 Query: 13 VVQHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGLGDIFPKATLYSIAEQALVDMAQHVASVARLGQNSGLMIGWSAPWQLLYRSSVHGATAQEFHRLCDGKPNTVCLAVDDRGHVFGGFTSVGWATGTSYQLDPAAFLFCQPDRGDSSVKQRYSPKGFFPQFALYHSDDW 741 V Q P +LI+NVGGAKL VKRSALTHV+ SKLA MFSGRWDHVLPRDHSGRIFLDLD+ WF PIT LS+LS G AAD + LP+ LSDDD+LGL+ACAEL+GL D+ P Q + M H+ SVARLGQ SGL IG APWQLLY SSV GATA EFHRLCD KPNTVCLAVDD+G+VFGGF V W + +Q DPA FLFCQ +S+ QRYSP+ P +A+ H W Sbjct: 7 VEQDCNPSEILIINVGGAKLFVKRSALTHVEGSKLARMFSGRWDHVLPRDHSGRIFLDLDINWFHPITNLLSELSGGAAADELQLPVMQLSDDDRLGLQACAELFGLCDVIPT--------QGVAGMPHHITSVARLGQESGLEIGRYAPWQLLYHSSVDGATAHEFHRLCDDKPNTVCLAVDDKGNVFGGFALVPWTSSGGWQRDPAVFLFCQGS--ESTAVQRYSPRVSSPYYAVCHDPGW 239
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Match: A0A835YJ41_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ41_9STRA) HSP 1 Score: 181 bits (459), Expect = 2.090e-51 Identity = 87/123 (70.73%), Postives = 99/123 (80.49%), Query Frame = 1 Query: 1222 LRGVHNGIVYIACSGTGQLCTMRDTFTQFGDTPLANKYASDVWGGNVEVE-LDEEGCVFEDHNQECFDKLVNVMRLRAIVRRTGFSGTIGSSKPAPMPAHLAPTMTNMLEYLMIDSKHFFSSL 1587 L+GVH+GIVYI C G GQLCTMRDTFT+FG + LANKYASDV N+ LDE+GC+ EDHN ECF KLVNVMRLRAIVRR F GT+G+SKP+PMPAHLAP MT ML YL ID + FFS+L Sbjct: 12 LKGVHDGIVYITCWGGGQLCTMRDTFTEFGGSMLANKYASDVRARNISAAALDEDGCIVEDHNHECFHKLVNVMRLRAIVRRPDFRGTVGNSKPSPMPAHLAPAMTEMLNYLAIDHERFFSAL 134
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Match: A0A835YWT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWT2_9STRA) HSP 1 Score: 140 bits (352), Expect = 3.960e-33 Identity = 68/103 (66.02%), Postives = 74/103 (71.84%), Query Frame = 1 Query: 25 YKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGL 333 Y PP LL LNVGGA L V+RSA+TH DS LAWMFSGRWDHVLP D GR FLDLDV WF PI L LSRG V +P+ L DD+LGLRACAEL+GL Sbjct: 56 YTPPELLTLNVGGAALTVRRSAVTHFPDSPLAWMFSGRWDHVLPHDSKGRPFLDLDVSWFKPIAGALHALSRGTEPHEVVVPVAHLVHDDRLGLRACAELFGL 158
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Match: A0A835YNW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNW7_9STRA) HSP 1 Score: 136 bits (343), Expect = 2.140e-31 Identity = 68/105 (64.76%), Postives = 74/105 (70.48%), Query Frame = 1 Query: 19 QHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGL 333 + Y PP LL LNVGGA L V+RSALTH DS LAWMFSG WDHVLPRD R FLDLDV WF PI L LSRG V +P+ L+ DD+LGLRACAEL GL Sbjct: 55 EDYAPPELLTLNVGGAALTVRRSALTHFPDSPLAWMFSGCWDHVLPRDTKHRPFLDLDVSWFKPIVGALHALSRGTEPHEVVVPVAHLAHDDRLGLRACAELLGL 159 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_17318 ID=mRNA_17318|Name=jgi.p|Trimin1|140119|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1587bp|location=Sequence derived from alignment at Contig_205:134765..137210+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TCCACTGCTGCTGTCGTGCAGCACTACAAGCCCCCTGCGCTTCTCATCCTback to top protein sequence of jgi.p|Trimin1|140119 >Trimin1|140119|gw1.205.4.1 ID=Trimin1|140119|gw1.205.4.1|Name=jgi.p|Trimin1|140119|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=529bp STAAVVQHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVback to top mRNA from alignment at Contig_205:134765..137210+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_17318 ID=mRNA_17318|Name=jgi.p|Trimin1|140119|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2446bp|location=Sequence derived from alignment at Contig_205:134765..137210+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_205:134765..137210+ >mRNA_17318 ID=mRNA_17318|Name=jgi.p|Trimin1|140119|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1587bp|location=Sequence derived from alignment at Contig_205:134765..137210+ (Tribonema minus UTEX_B_3156 )back to top |