mRNA_17318 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|140119
Unique NamemRNA_17318
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Match: A0A835Z2V8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2V8_9STRA)

HSP 1 Score: 1082 bits (2798), Expect = 0.000e+0
Identity = 529/529 (100.00%), Postives = 529/529 (100.00%), Query Frame = 1
Query:    1 STAAVVQHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGLGDIFPKATLYSIAEQALVDMAQHVASVARLGQNSGLMIGWSAPWQLLYRSSVHGATAQEFHRLCDGKPNTVCLAVDDRGHVFGGFTSVGWATGTSYQLDPAAFLFCQPDRGDSSVKQRYSPKGFFPQFALYHSDDWPRFGSSDLWFKSAAETLMYSSSSTSFQPMPINGVNDGTVIDLLIWQVPLTDGSAQPVPPPRSDNTILSQEVMTRAATTLNLFSLWLKEQLGACDSELQAIQRRAELFASERAFMQQLNTALPPDDMDTRKNAWLEQVCTSIYVCTRCHLSVSPKACAVYRLRGVHNGIVYIACSGTGQLCTMRDTFTQFGDTPLANKYASDVWGGNVEVELDEEGCVFEDHNQECFDKLVNVMRLRAIVRRTGFSGTIGSSKPAPMPAHLAPTMTNMLEYLMIDSKHFFSSL 1587
            STAAVVQHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGLGDIFPKATLYSIAEQALVDMAQHVASVARLGQNSGLMIGWSAPWQLLYRSSVHGATAQEFHRLCDGKPNTVCLAVDDRGHVFGGFTSVGWATGTSYQLDPAAFLFCQPDRGDSSVKQRYSPKGFFPQFALYHSDDWPRFGSSDLWFKSAAETLMYSSSSTSFQPMPINGVNDGTVIDLLIWQVPLTDGSAQPVPPPRSDNTILSQEVMTRAATTLNLFSLWLKEQLGACDSELQAIQRRAELFASERAFMQQLNTALPPDDMDTRKNAWLEQVCTSIYVCTRCHLSVSPKACAVYRLRGVHNGIVYIACSGTGQLCTMRDTFTQFGDTPLANKYASDVWGGNVEVELDEEGCVFEDHNQECFDKLVNVMRLRAIVRRTGFSGTIGSSKPAPMPAHLAPTMTNMLEYLMIDSKHFFSSL
Sbjct:    1 STAAVVQHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGLGDIFPKATLYSIAEQALVDMAQHVASVARLGQNSGLMIGWSAPWQLLYRSSVHGATAQEFHRLCDGKPNTVCLAVDDRGHVFGGFTSVGWATGTSYQLDPAAFLFCQPDRGDSSVKQRYSPKGFFPQFALYHSDDWPRFGSSDLWFKSAAETLMYSSSSTSFQPMPINGVNDGTVIDLLIWQVPLTDGSAQPVPPPRSDNTILSQEVMTRAATTLNLFSLWLKEQLGACDSELQAIQRRAELFASERAFMQQLNTALPPDDMDTRKNAWLEQVCTSIYVCTRCHLSVSPKACAVYRLRGVHNGIVYIACSGTGQLCTMRDTFTQFGDTPLANKYASDVWGGNVEVELDEEGCVFEDHNQECFDKLVNVMRLRAIVRRTGFSGTIGSSKPAPMPAHLAPTMTNMLEYLMIDSKHFFSSL 529          
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Match: A0A835Z1Y2_9STRA (TLDc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1Y2_9STRA)

HSP 1 Score: 663 bits (1710), Expect = 1.130e-233
Identity = 350/554 (63.18%), Postives = 407/554 (73.47%), Query Frame = 1
Query:    1 STAAVVQHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGLGDIFPKAT--LYSIAEQALVDMAQHVASVARLGQNSGLMIGWSAPWQLLYRSSVHGATAQEFHRLCDGKPNTVCLAVDDRGHVFGGFTSVGWATGT-SYQLDPAAFLFCQPDRGDSSVKQRYSPKGFFPQFALYH-SDDWPRFG-SSDLWFKSAAE-TLMYSSSSTSFQPMPINGVNDGTVIDLLIWQVPLTDGSAQPVPPPRSDNTILSQEV------------------MTRAATTLNL-FSLWLKEQLGACDSELQAIQRRAELFASERAFMQQLNTALPPDDMDTRKNAWLEQVCTSIYVCTRCHLSVSPKACAVYRLRGVHNGIVYIACSGTGQLCTMRDTFTQFGDTPLANKYASDVWGGNVEVELDEEGCVFEDHNQECFDKLVNVMRLRAIVRRTGFSGTIGSSKPAPMPAHLAPTMTNMLEYLMIDSKHFFSSL 1587
            +  AV+Q YKPP+LL LNVGGAKL VKRSALT   DSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPIT+YLS+LSRG AAD VHLP+T LSDDDKLG++ACAE++GL  I  +       +A QAL ++ QH+ASVARLG+ + L IGWSAPWQLLY+SS HGAT QEFHRLC  KPNT+CLA DD+G+VFGGFT+V   +   S+Q DPAAFLFC+    +S+  QRY   G  PQ A+ H S   P FG  +DL F  ++E  + Y S++ ++QPMPING + G V+ L +WQVP T  SA P   P +D  +  Q                    +T  ATTL+  F LWLKEQL ACDSEL+A+ RRA+LF SE AFMQQ+N  L P+D+D RK AWLE+VC    + +       P      RL+G+HNGIVYIAC GTGQLCTMR+TFTQFG TPLANKYASDVWGG VEVELDEEGCVFEDHNQECF KL NVMRLR+IVRR  FSGTIGSSKPAPMPAHL  TMTNMLEYLMIDS+ FFSSL
Sbjct:    7 ANGAVLQDYKPPSLLTLNVGGAKLLVKRSALTLFDDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITEYLSELSRGAAADDVHLPLTQLSDDDKLGVQACAEMFGLCPILARELDPRLFLARQALANVTQHIASVARLGEETKLKIGWSAPWQLLYQSSAHGATPQEFHRLCAHKPNTICLATDDKGNVFGGFTTVARTSSPGSWQPDPAAFLFCKGS--NSTAMQRYCQTGTSPQHAVLHKSSHGPIFGVGNDLQFAFSSEGAIAYCSATRTYQPMPINGTSGGKVVYLFVWQVPQTGDSAPPSLTPNADAAVSCQPAPSLSYITSPVALRADMSSLTDPATTLSFHFGLWLKEQLDACDSELRAVDRRAKLFTSEMAFMQQVNATLSPEDLDGRKRAWLEKVCIQTAMPSESDPPAPPT-----RLKGIHNGIVYIACRGTGQLCTMRETFTQFGATPLANKYASDVWGGIVEVELDEEGCVFEDHNQECFHKLANVMRLRSIVRRPDFSGTIGSSKPAPMPAHLTATMTNMLEYLMIDSEQFFSSL 553          
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Match: A0A835YZL9_9STRA (TLDc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZL9_9STRA)

HSP 1 Score: 623 bits (1607), Expect = 4.520e-218
Identity = 337/555 (60.72%), Postives = 405/555 (72.97%), Query Frame = 1
Query:   10 AVVQHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGLGDIFPKATLYS--IAEQALVDMAQHVASVARLGQNSGLMIGWSAPWQLLYRSSVHGATAQEFHRLCDGKPNTVCLAVDDRGHVFGGFTSVGWATGTSYQLDPAAFLFCQPDRGDSSVKQRYSPKGFFPQFAL-YHSDDWPRFGSS-DLWFKSA-AETLMYSSSSTSFQPMPINGVNDGTVIDLLIWQVPLTDGSAQPVPPPRSDNTILSQEV---------------------MTRAATTLNL-FSLWLKEQLGACDSELQAIQRRAELFASERAFMQQLNTALPPDDMDTRKNAWLEQVCTSIYVCTRCHLSVSPKACAVYRLRGVHNGIVYIACSGTGQLCTMRDTFTQFGD-TPLANKYASDVWGGNVE-VELDEEGCVFEDHNQECFDKLVNVMRLRAIVRRTGFSGTIGSSKPAPMPAHLAPTMTNMLEYLMIDSKHFFSSL 1587
            AV+Q Y+PP++LILNVGGAKLRVKRSALTHV DSKLAWMFSGRWDHVLPR+HSGR FLDLDVKWFSPIT +LSKLS G AAD V LP++ LSDDDKLG++ACAE++GL  I  +       + +QAL ++AQHVASVA LGQ S  ++GWSAPWQLLY+SSVHGATAQEFHRLCD KP+T+CLA+D+ G++FGG+TSV W +   +Q DPAAFLF +  RG +++ Q YS KG  P+ ++ +HS  WP FG   DL FKS+ A T+ YSSSS ++  MPING + GTVIDL +WQVP T GSA       +D+T+L+Q                       +T  AT L+  F LWLKEQL     EL+A++ R ELFASE+ FMQQL  A+ PDD++ RK AWLE+V T  + CT       P A     L+GVH+GIVYI C GTGQLCTMR+TFTQ GD TPLA KYASDVW  N+E   LDE+GCV EDHN ECF KLVNVMRLRA+VRR  FS T+GSSKPAPMPAHLA  M +MLEYLMIDS+ FF +L
Sbjct:    6 AVLQEYQPPSVLILNVGGAKLRVKRSALTHVDDSKLAWMFSGRWDHVLPRNHSGRKFLDLDVKWFSPITDFLSKLSSGAAADEVRLPVSQLSDDDKLGVQACAEMFGLCHILARELNLRPLLVQQALANLAQHVASVAHLGQESKRVVGWSAPWQLLYQSSVHGATAQEFHRLCDCKPHTICLAIDNEGNMFGGYTSVAWTSSDGWQADPAAFLFYE-GRGSAAL-QCYSQKGTSPEHSIRHHSSLWPTFGGGHDLRFKSSSAGTITYSSSSKTYHTMPINGTS-GTVIDLFVWQVPQTGGSAPAATD--ADDTVLNQPACRLSYTSDSTPPVAFRADLSSLTGPATALSFRFGLWLKEQLDMYAIELRAVKHRTELFASEKTFMQQLIAAMSPDDVNGRKRAWLEKVRT--HNCTHSTGGTDPPA-TPSPLKGVHHGIVYITCWGTGQLCTMRETFTQLGDETPLAKKYASDVWAANIESAALDEDGCVIEDHNAECFQKLVNVMRLRAMVRRPDFSSTVGSSKPAPMPAHLARAMASMLEYLMIDSEQFFGTL 552          
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Match: A0A835YMH1_9STRA (TLDc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMH1_9STRA)

HSP 1 Score: 585 bits (1507), Expect = 1.890e-203
Identity = 316/538 (58.74%), Postives = 389/538 (72.30%), Query Frame = 1
Query:   13 VVQHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGLGDIFPKATLYSIAEQALVDMAQHVASVARLGQNSGLMIGWSAPWQLLYRSSVHGATAQEFHRLCDGKPNTVCLAVDDRGHVFGGFTSVGWATGTSYQLDPAAFLFCQPDRGDSSVKQRYSPKGFFPQFALYHSDDW-PRFGSS-DLWFKSAAET---LMYSSSSTSFQPMPINGVNDGTVIDLLIWQVPLTDGSA-----QPVPPPRSDNTILSQEVMTRAATTLNL-FSLWLKEQLGACDSELQAIQRRAELFASERAFMQQLNTALPPDDMDTRKNAWLEQVCTSIYVCTRCHLSVSPKACAVYR-LRGVHNGIVYIACSGTGQLCTMRDTFTQFGDTPLANKYASDVWGGNVEVE-LDEEGCVFEDHNQECFDKLVNVMRLRAIVRRTGFSGTIGSSKPAPMPAHLAPTMTNMLEYLMIDSKHFFSSL 1587
            ++Q YKP  +L LN+GGAKLR+KRSALTH++DSKLAWMFSGRWDHVLPRDH GRIFLDLD+ WF PIT +LS+LS+  AAD  +LPI   SDDD+LGL+AC EL+GL D        SI  Q L  M QH+ASVARLGQ SGL IGWSAPWQLLY++SV+GA A+EFH  CDGKP+T+CLA+D+ G++ GGFTSV W +  +Y+ DPAAFLF +    +S   QRYS  G  PQ+A+ H+  + P FG   D  F  + +    + YSSS+ ++QPMPING + GTV DL +WQVP   GSA         PP      +S   +T  AT+L+  F LWLKEQL A DSELQAI+R+A+LFA+E+AFMQQL     P+D+D+RK AWLE+V T +    R H  ++ +A A    LRGVHNGIVY+AC G GQLCTMR+ F QFG + LANKYASDVW  N+    LDE+GC+ E+H+ ECF KLVNVMRLRAIVRR  FSGT+GSSKPAPMPAHLAP MT MLEYLMI+ +  F++L
Sbjct:    1 LMQDYKPTEVLTLNIGGAKLRLKRSALTHIEDSKLAWMFSGRWDHVLPRDHLGRIFLDLDINWFRPITDFLSELSQSAAADEAYLPIMQRSDDDRLGLQACVELFGLCD--------SIPAQGLAGMPQHIASVARLGQESGLKIGWSAPWQLLYQASVNGAKAREFHSWCDGKPHTLCLAMDNEGNILGGFTSVPWESSGTYKRDPAAFLFFKGV--ESPATQRYSQTGNSPQWAVIHNSGYGPAFGGGRDFAFTFSRQPEGGMTYSSSANTYQPMPINGTS-GTVSDLFVWQVPQIGGSAPFNYSSDSTPPLELRADMSS--LTGPATSLSFHFGLWLKEQLDAYDSELQAIERQAKLFAAEKAFMQQL----APEDIDSRKRAWLEKVGTYV----RVHSVLTSRASAPPSPLRGVHNGIVYMACWGGGQLCTMREMFKQFGRSMLANKYASDVWARNIRAAALDEDGCIVENHHHECFQKLVNVMRLRAIVRRPAFSGTVGSSKPAPMPAHLAPAMTKMLEYLMINHEQCFNAL 517          
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Match: A0A835YTK3_9STRA (TLDc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTK3_9STRA)

HSP 1 Score: 551 bits (1419), Expect = 5.010e-189
Identity = 317/558 (56.81%), Postives = 381/558 (68.28%), Query Frame = 1
Query:   25 YKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGLGDIFPKATLYSIAEQALVDMAQHVASVARLGQNSGLMIGWSAPWQLLYRSSVHGATAQEFHRLCDGKPNTVCLAVDDRGHVFGGFTSVGWATGTS--YQLDPAAFLFCQPDRGDSSVKQRYSPKGFFPQFALYHSDDW-PRFGSS-DLWFKSAAETLMYSSSSTSFQPMPINGVNDGTVIDLLIWQVPLTDGSA--QPVPPPRSDNTILSQEV---------------------MTRAATTLNL-FSLWLKEQLGACDSELQAIQRRAELFASERAFMQQLNTALPPDDMDTRKNAWLEQVCTSIYVCTRCHLS----VSPKACAVYRLRGVHNGIVYIACSGTGQLCTMRDTFTQFGDTPLANKYASDVWGGNVEVE-LDEEGCVFEDHNQECFDKLVNVMRLRAIV--RRTGFSGTIGSSKPAPMPAHLAPTM--TNMLEYLMIDSKHFFSSL 1587
            Y PP +L LNVGGAKL +KRSA+ +V+DSKLAWMF+GRWDHVLPRDHSGRIFLDLD+ WF PIT +LS+LS+G  A   +LPI  L DDD++G++AC EL+GL DI     + S      V + QHV SVA LGQ SGL IGWSAPWQLLY+SSV+GA A +FHRLCDGKPNTV LAVD++G+VFGG  +V WA+ +S  +Q D AAFLF +     S+  QRYS      Q A++H   + P FG+  DL F     T+ ++SS+ SFQP+PI G + GTVIDL +WQVP T GSA  +  P PR+D T   Q V                     +T  ATTL+  F LWLKEQL A D+ELQA++RRAELFA+E+AF+QQL     P+D+D RK AWLE+V T I V      S    + P A     L+GVHNGIVYI C G GQLCTMR+TF QFG + LANKYASDVW  NV    LD++GCV EDHN ECF KLVNVMRLRAIV  RR GFSGTIGS+KP+ MPAHLA  M  T ML YL ID + F S+L
Sbjct:   47 YNPPEVLTLNVGGAKLLLKRSAMAYVEDSKLAWMFNGRWDHVLPRDHSGRIFLDLDINWFRPITNFLSELSQGAEAGVAYLPIMQLMDDDRVGVQACMELFGLCDIVSAQGIAS------VPLTQHVTSVAHLGQESGLEIGWSAPWQLLYQSSVNGAIAHDFHRLCDGKPNTVSLAVDEKGNVFGGLATVAWASHSSRSWQPDRAAFLFYEGS--GSTAMQRYSQARNNIQSAVFHHSSYGPVFGNGYDLVFTFIGGTITHTSSTQSFQPLPIKGTS-GTVIDLFVWQVPQTGGSAPLKLSPSPRADATASRQPVCNLSYNSDSAPPLKLRADMSSLTGPATTLSFHFGLWLKEQLDAFDNELQAVERRAELFAAEKAFLQQL----APEDIDGRKRAWLEKVGTYIRVHNANMKSLGGDIHPPA-PPSPLKGVHNGIVYITCWGGGQLCTMRETFKQFGRSMLANKYASDVWARNVRAAALDDDGCVVEDHNHECFQKLVNVMRLRAIVTVRRPGFSGTIGSAKPSHMPAHLALAMSVTEMLNYLAIDHEQFVSAL 590          
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Match: A0A835Z9G2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G2_9STRA)

HSP 1 Score: 353 bits (905), Expect = 3.510e-114
Identity = 190/327 (58.10%), Postives = 227/327 (69.42%), Query Frame = 1
Query:    4 TAAVVQHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGLGDIFPKATLYSIAEQALVDMAQHVASVARLGQNSGLMIGWSAPWQLLYRSSVHGATAQEFHRLCDGKPNTVCLAVDDRGHVFGGFTSVGWATGT-SYQLDPAAFLFCQPDRGDSSVKQRYSPKGFFPQFAL-YHSDDWPRFGSS-DLWF---------KSAAETLMYSSSSTSFQPMPINGVNDGTVIDLLIWQVPLTDGSAQPVPPPRSDNTILSQ 948
            TA V+Q Y+PP+LL+LNVGGAKLRVKRSALTHVKDSKLAWMF+GRWDH LPRDHSG IFLD+DVKWFSPI +YLS+LSRG AA+  +LPI  LSDDD+LG RAC EL+GL DI PK        QA    AQ +ASVA  G  SGL + WSA WQLL +SS H AT QEFHRL  G+PNTVCLA+DD G+VFGGFTS  W  G+ +Y+ DPAAFLFC+    DS   + YS  G +PQ A+ +HS   P FG   DL F          S+AE + Y SS++++ PMPI+G  DGTV+D  +WQVP    +A P   P  D  +  Q
Sbjct:   58 TATVLQDYEPPSLLVLNVGGAKLRVKRSALTHVKDSKLAWMFNGRWDHWLPRDHSGHIFLDVDVKWFSPIAEYLSELSRGTAANEAYLPIMQLSDDDRLGFRACVELFGLRDIMPK--------QAFDSQAQVLASVACFGLESGLNLAWSALWQLLCQSSAHDATTQEFHRLYYGRPNTVCLAIDDEGNVFGGFTSEAWIAGSGTYKPDPAAFLFCKTS--DSPTTRCYSQTGSYPQCAVCHHSSVGPLFGGGHDLQFIFSSAGAVAYSSAEAITYRSSASAYHPMPISGT-DGTVVDFFVWQVPQAGATAPPSLTPNFDAAVPRQ 373          
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Match: A0A835YIU4_9STRA (TLDc domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIU4_9STRA)

HSP 1 Score: 306 bits (785), Expect = 4.650e-98
Identity = 154/243 (63.37%), Postives = 176/243 (72.43%), Query Frame = 1
Query:   13 VVQHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGLGDIFPKATLYSIAEQALVDMAQHVASVARLGQNSGLMIGWSAPWQLLYRSSVHGATAQEFHRLCDGKPNTVCLAVDDRGHVFGGFTSVGWATGTSYQLDPAAFLFCQPDRGDSSVKQRYSPKGFFPQFALYHSDDW 741
            V Q   P  +LI+NVGGAKL VKRSALTHV+ SKLA MFSGRWDHVLPRDHSGRIFLDLD+ WF PIT  LS+LS G AAD + LP+  LSDDD+LGL+ACAEL+GL D+ P         Q +  M  H+ SVARLGQ SGL IG  APWQLLY SSV GATA EFHRLCD KPNTVCLAVDD+G+VFGGF  V W +   +Q DPA FLFCQ    +S+  QRYSP+   P +A+ H   W
Sbjct:    7 VEQDCNPSEILIINVGGAKLFVKRSALTHVEGSKLARMFSGRWDHVLPRDHSGRIFLDLDINWFHPITNLLSELSGGAAADELQLPVMQLSDDDRLGLQACAELFGLCDVIPT--------QGVAGMPHHITSVARLGQESGLEIGRYAPWQLLYHSSVDGATAHEFHRLCDDKPNTVCLAVDDKGNVFGGFALVPWTSSGGWQRDPAVFLFCQGS--ESTAVQRYSPRVSSPYYAVCHDPGW 239          
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Match: A0A835YJ41_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ41_9STRA)

HSP 1 Score: 181 bits (459), Expect = 2.090e-51
Identity = 87/123 (70.73%), Postives = 99/123 (80.49%), Query Frame = 1
Query: 1222 LRGVHNGIVYIACSGTGQLCTMRDTFTQFGDTPLANKYASDVWGGNVEVE-LDEEGCVFEDHNQECFDKLVNVMRLRAIVRRTGFSGTIGSSKPAPMPAHLAPTMTNMLEYLMIDSKHFFSSL 1587
            L+GVH+GIVYI C G GQLCTMRDTFT+FG + LANKYASDV   N+    LDE+GC+ EDHN ECF KLVNVMRLRAIVRR  F GT+G+SKP+PMPAHLAP MT ML YL ID + FFS+L
Sbjct:   12 LKGVHDGIVYITCWGGGQLCTMRDTFTEFGGSMLANKYASDVRARNISAAALDEDGCIVEDHNHECFHKLVNVMRLRAIVRRPDFRGTVGNSKPSPMPAHLAPAMTEMLNYLAIDHERFFSAL 134          
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Match: A0A835YWT2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWT2_9STRA)

HSP 1 Score: 140 bits (352), Expect = 3.960e-33
Identity = 68/103 (66.02%), Postives = 74/103 (71.84%), Query Frame = 1
Query:   25 YKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGL 333
            Y PP LL LNVGGA L V+RSA+TH  DS LAWMFSGRWDHVLP D  GR FLDLDV WF PI   L  LSRG     V +P+  L  DD+LGLRACAEL+GL
Sbjct:   56 YTPPELLTLNVGGAALTVRRSAVTHFPDSPLAWMFSGRWDHVLPHDSKGRPFLDLDVSWFKPIAGALHALSRGTEPHEVVVPVAHLVHDDRLGLRACAELFGL 158          
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Match: A0A835YNW7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNW7_9STRA)

HSP 1 Score: 136 bits (343), Expect = 2.140e-31
Identity = 68/105 (64.76%), Postives = 74/105 (70.48%), Query Frame = 1
Query:   19 QHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHVLPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKLGLRACAELYGL 333
            + Y PP LL LNVGGA L V+RSALTH  DS LAWMFSG WDHVLPRD   R FLDLDV WF PI   L  LSRG     V +P+  L+ DD+LGLRACAEL GL
Sbjct:   55 EDYAPPELLTLNVGGAALTVRRSALTHFPDSPLAWMFSGCWDHVLPRDTKHRPFLDLDVSWFKPIVGALHALSRGTEPHEVVVPVAHLAHDDRLGLRACAELLGL 159          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|140119 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z2V8_9STRA0.000e+0100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z1Y2_9STRA1.130e-23363.18TLDc domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835YZL9_9STRA4.520e-21860.72TLDc domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835YMH1_9STRA1.890e-20358.74TLDc domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835YTK3_9STRA5.010e-18956.81TLDc domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835Z9G2_9STRA3.510e-11458.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YIU4_9STRA4.650e-9863.37TLDc domain-containing protein n=1 Tax=Tribonema m... [more]
A0A835YJ41_9STRA2.090e-5170.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YWT2_9STRA3.960e-3366.02Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YNW7_9STRA2.140e-3164.76Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_205contigContig_205:134765..137210 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|140119|gw1.205.4.1
DescriptionSterile alpha motif.
COG categoryS
Max annot lvl2836|Bacillariophyta
EggNOG OGsKOG2723@1|root,KOG2723@2759|Eukaryota,2XF76@2836|Bacillariophyta
Evalue5.1e-23
Seed ortholog35128.Thaps11039
Hectar predicted targeting categoryother localisation
TranscriptId140441
TrackFilteredModels1
ProteinId140119
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|140119gene_17318Tribonema minus UTEX_B_3156 geneContig_205 134765..137210 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_17318_1exon_17318_1Tribonema minus UTEX_B_3156 exonContig_205 134765..135717 +
exon_17318_2exon_17318_2Tribonema minus UTEX_B_3156 exonContig_205 135793..136056 +
exon_17318_3exon_17318_3Tribonema minus UTEX_B_3156 exonContig_205 136841..137210 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_17318CDS_17318Tribonema minus UTEX_B_3156 CDSContig_205 134765..135717 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|140119Trimin1|140119|gw1.205.4.1Tribonema minus UTEX_B_3156 polypeptideContig_205 134765..137210 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_17318 ID=mRNA_17318|Name=jgi.p|Trimin1|140119|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1587bp|location=Sequence derived from alignment at Contig_205:134765..137210+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TCCACTGCTGCTGTCGTGCAGCACTACAAGCCCCCTGCGCTTCTCATCCT
CAACGTCGGCGGCGCCAAGCTTCGCGTCAAGCGCAGCGCTCTGACGCACG
TCAAGGACAGCAAGCTCGCGTGGATGTTCAGTGGCCGGTGGGACCACGTA
CTGCCACGCGACCATTCAGGCCGCATTTTTCTTGACCTGGACGTCAAGTG
GTTCAGTCCGATCACTCAGTACCTCAGCAAGCTCAGCCGGGGCGTAGCAG
CAGACGCAGTGCACCTGCCAATTACGCTGTTGAGCGATGATGACAAGCTG
GGTTTGCGAGCGTGTGCAGAGCTGTATGGCCTCGGTGACATTTTCCCCAA
GGCGACACTTTACAGTATTGCTGAGCAGGCACTTGTGGACATGGCTCAGC
ACGTTGCATCAGTTGCGCGCCTCGGACAGAACAGCGGGCTCATGATTGGC
TGGTCTGCTCCGTGGCAGCTGCTGTACCGATCTTCTGTTCACGGGGCCAC
AGCACAAGAGTTTCACCGCCTGTGTGACGGCAAGCCCAACACGGTCTGCC
TTGCCGTTGATGACAGGGGCCACGTGTTTGGCGGTTTCACATCGGTAGGC
TGGGCGACTGGTACGTCTTACCAGCTTGACCCAGCCGCATTCTTGTTCTG
CCAACCCGACAGAGGTGATTCCAGCGTCAAGCAGCGGTATTCCCCAAAGG
GTTTCTTTCCTCAGTTCGCCTTGTACCACAGTGATGACTGGCCTAGATTT
GGCTCCAGTGACTTGTGGTTCAAGAGTGCCGCGGAAACGCTCATGTACAG
CAGCTCCTCCACTAGTTTTCAACCCATGCCCATCAATGGCGTCAACGACG
GCACCGTGATCGACCTTCTCATTTGGCAGGTACCGCTTACAGATGGCAGT
GCTCAGCCCGTGCCGCCGCCTCGCAGTGACAACACCATCTTGTCTCAGGA
AGTCATGACCAGGGCTGCCACTACGCTGAACCTTTTCAGCCTGTGGCTGA
AGGAGCAGCTGGGTGCCTGTGACAGCGAGCTGCAAGCTATTCAGCGCCGT
GCGGAGCTGTTCGCATCAGAGAGGGCGTTCATGCAGCAGCTCAACACAGC
GCTACCACCAGATGATATGGACACCCGCAAGAACGCTTGGCTTGAACAGG
TATGTACTTCTATCTATGTATGCACACGTTGCCACCTAAGTGTATCGCCA
AAAGCATGCGCGGTCTACCGTCTCAGGGGCGTCCACAACGGCATTGTCTA
CATTGCCTGCAGCGGCACTGGCCAGCTGTGCACCATGCGAGACACCTTCA
CGCAGTTTGGCGACACGCCGCTCGCGAACAAGTACGCCTCGGACGTCTGG
GGCGGCAACGTTGAAGTTGAACTTGACGAGGAGGGCTGCGTCTTCGAGGA
CCACAACCAGGAGTGCTTCGACAAGCTGGTGAACGTGATGCGGCTGCGCG
CCATAGTGCGCAGGACTGGCTTCAGCGGCACGATAGGCAGCAGCAAGCCG
GCGCCCATGCCCGCCCACCTGGCGCCTACCATGACAAACATGCTGGAGTA
CCTGATGATCGACAGCAAGCACTTCTTCAGCTCCCTA
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protein sequence of jgi.p|Trimin1|140119

>Trimin1|140119|gw1.205.4.1 ID=Trimin1|140119|gw1.205.4.1|Name=jgi.p|Trimin1|140119|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=529bp
STAAVVQHYKPPALLILNVGGAKLRVKRSALTHVKDSKLAWMFSGRWDHV
LPRDHSGRIFLDLDVKWFSPITQYLSKLSRGVAADAVHLPITLLSDDDKL
GLRACAELYGLGDIFPKATLYSIAEQALVDMAQHVASVARLGQNSGLMIG
WSAPWQLLYRSSVHGATAQEFHRLCDGKPNTVCLAVDDRGHVFGGFTSVG
WATGTSYQLDPAAFLFCQPDRGDSSVKQRYSPKGFFPQFALYHSDDWPRF
GSSDLWFKSAAETLMYSSSSTSFQPMPINGVNDGTVIDLLIWQVPLTDGS
AQPVPPPRSDNTILSQEVMTRAATTLNLFSLWLKEQLGACDSELQAIQRR
AELFASERAFMQQLNTALPPDDMDTRKNAWLEQVCTSIYVCTRCHLSVSP
KACAVYRLRGVHNGIVYIACSGTGQLCTMRDTFTQFGDTPLANKYASDVW
GGNVEVELDEEGCVFEDHNQECFDKLVNVMRLRAIVRRTGFSGTIGSSKP
APMPAHLAPTMTNMLEYLMIDSKHFFSSL
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mRNA from alignment at Contig_205:134765..137210+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_17318 ID=mRNA_17318|Name=jgi.p|Trimin1|140119|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2446bp|location=Sequence derived from alignment at Contig_205:134765..137210+ (Tribonema minus UTEX_B_3156 )
TCCACTGCTGCTGTCGTGCAGCACTACAAGCCCCCTGCGCTTCTCATCCT CAACGTCGGCGGCGCCAAGCTTCGCGTCAAGCGCAGCGCTCTGACGCACG TCAAGGACAGCAAGCTCGCGTGGATGTTCAGTGGCCGGTGGGACCACGTA CTGCCACGCGACCATTCAGGCCGCATTTTTCTTGACCTGGACGTCAAGTG GTTCAGTCCGATCACTCAGTACCTCAGCAAGCTCAGCCGGGGCGTAGCAG CAGACGCAGTGCACCTGCCAATTACGCTGTTGAGCGATGATGACAAGCTG GGTTTGCGAGCGTGTGCAGAGCTGTATGGCCTCGGTGACATTTTCCCCAA GGCGACACTTTACAGTATTGCTGAGCAGGCACTTGTGGACATGGCTCAGC ACGTTGCATCAGTTGCGCGCCTCGGACAGAACAGCGGGCTCATGATTGGC TGGTCTGCTCCGTGGCAGCTGCTGTACCGATCTTCTGTTCACGGGGCCAC AGCACAAGAGTTTCACCGCCTGTGTGACGGCAAGCCCAACACGGTCTGCC TTGCCGTTGATGACAGGGGCCACGTGTTTGGCGGTTTCACATCGGTAGGC TGGGCGACTGGTACGTCTTACCAGCTTGACCCAGCCGCATTCTTGTTCTG CCAACCCGACAGAGGTGATTCCAGCGTCAAGCAGCGGTATTCCCCAAAGG GTTTCTTTCCTCAGTTCGCCTTGTACCACAGTGATGACTGGCCTAGATTT GGCTCCAGTGACTTGTGGTTCAAGAGTGCCGCGGAAACGCTCATGTACAG CAGCTCCTCCACTAGTTTTCAACCCATGCCCATCAATGGCGTCAACGACG GCACCGTGATCGACCTTCTCATTTGGCAGGTACCGCTTACAGATGGCAGT GCTCAGCCCGTGCCGCCGCCTCGCAGTGACAACACCATCTTGTCTCAGGA AGTGTGCGGCCTTGGCTGTGGCAGCGACACCAGCAGCACGTTACCATTAG CGCTCTGTGCTCAGGCTGACATGTCCAGCATGACCAGGGCTGCCACTACG CTGAACCTTTTCAGCCTGTGGCTGAAGGAGCAGCTGGGTGCCTGTGACAG CGAGCTGCAAGCTATTCAGCGCCGTGCGGAGCTGTTCGCATCAGAGAGGG CGTTCATGCAGCAGCTCAACACAGCGCTACCACCAGATGATATGGACACC CGCAAGAACGCTTGGCTTGAACAGGTATGTACTTCTATCTATGTATGCAC ACGTTGCCACCTAAGTGTATCGCCAAAAGCATGCGCGGTCTAGTAGTACG CAGGCTAAACTAAACACACATGCGAGAAATTCAGTATGTTGATGTTGACA TCTGGACCACTGTATGGGCCTAACTACTGCAGTTAGCAGAGAATGGTGCT GCAGCAAAGTGTTGTGCAGACAGAGCGCTCAAGTAATTATTTTCATGTGG GCTACTGTGTGCTTGTACATGGGAGAAAATTGTGTGCTGCTGAAGTGGGC CACTGCACATCATGCACTGCGTGTATGCTACATGCACTGCATGTATGGCT ACAACAAGTATGCATGCACATGCTGCAGACACAAATCACAGGATGTCTTG ACCGCGACTGGCAATCACACGGGGTTTACTGTTTCTGCAGTGCACTAAAT GTAATCACTTCATTTTATTATGCCACTTTATCAAAGACGAATGTAGTGAA CCTTTGTAAGTAGCAGAAGCTCAGTCAAAGCGCACTACTGTACGCATTTG CTCGCTACTAGTGCATCCTGCTGCCACCCCATTTACACTCTGAAAATTGC TCATGTCGAGCTGTGCGCTACATGAAGAGCAGCTGCCCATATCCGCAGTT ACATGAATAGCATCAGACGGCAGGAGTTGCAGCCGTACGCCACTTGCAGT CTACAGCATCAATCGGCAGGATTTGGAGCTATGTTGTGATGCTGAGTGTC ACTGCCAACAGCTAATTCAAGGCTGCCACAAAGCTCTGACCATCGCTCCT TTTCCTTGCCCCATTGTGGTGCTACCCTGTGCCCTCAGGTTCAGGCTGGT GACACCCACCCCCCTGCACCCCCCAGCCGTCTCAGGGGCGTCCACAACGG CATTGTCTACATTGCCTGCAGCGGCACTGGCCAGCTGTGCACCATGCGAG ACACCTTCACGCAGTTTGGCGACACGCCGCTCGCGAACAAGTACGCCTCG GACGTCTGGGGCGGCAACGTTGAAGTTGAACTTGACGAGGAGGGCTGCGT CTTCGAGGACCACAACCAGGAGTGCTTCGACAAGCTGGTGAACGTGATGC GGCTGCGCGCCATAGTGCGCAGGACTGGCTTCAGCGGCACGATAGGCAGC AGCAAGCCGGCGCCCATGCCCGCCCACCTGGCGCCTACCATGACAAACAT GCTGGAGTACCTGATGATCGACAGCAAGCACTTCTTCAGCTCCCTA
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Coding sequence (CDS) from alignment at Contig_205:134765..137210+

>mRNA_17318 ID=mRNA_17318|Name=jgi.p|Trimin1|140119|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1587bp|location=Sequence derived from alignment at Contig_205:134765..137210+ (Tribonema minus UTEX_B_3156 )
TCCACTGCTGCTGTCGTGCAGCACTACAAGCCCCCTGCGCTTCTCATCCT
CAACGTCGGCGGCGCCAAGCTTCGCGTCAAGCGCAGCGCTCTGACGCACG
TCAAGGACAGCAAGCTCGCGTGGATGTTCAGTGGCCGGTGGGACCACGTA
CTGCCACGCGACCATTCAGGCCGCATTTTTCTTGACCTGGACGTCAAGTG
GTTCAGTCCGATCACTCAGTACCTCAGCAAGCTCAGCCGGGGCGTAGCAG
CAGACGCAGTGCACCTGCCAATTACGCTGTTGAGCGATGATGACAAGCTG
GGTTTGCGAGCGTGTGCAGAGCTGTATGGCCTCGGTGACATTTTCCCCAA
GGCGACACTTTACAGTATTGCTGAGCAGGCACTTGTGGACATGGCTCAGC
ACGTTGCATCAGTTGCGCGCCTCGGACAGAACAGCGGGCTCATGATTGGC
TGGTCTGCTCCGTGGCAGCTGCTGTACCGATCTTCTGTTCACGGGGCCAC
AGCACAAGAGTTTCACCGCCTGTGTGACGGCAAGCCCAACACGGTCTGCC
TTGCCGTTGATGACAGGGGCCACGTGTTTGGCGGTTTCACATCGGTAGGC
TGGGCGACTGGTACGTCTTACCAGCTTGACCCAGCCGCATTCTTGTTCTG
CCAACCCGACAGAGGTGATTCCAGCGTCAAGCAGCGGTATTCCCCAAAGG
GTTTCTTTCCTCAGTTCGCCTTGTACCACAGTGATGACTGGCCTAGATTT
GGCTCCAGTGACTTGTGGTTCAAGAGTGCCGCGGAAACGCTCATGTACAG
CAGCTCCTCCACTAGTTTTCAACCCATGCCCATCAATGGCGTCAACGACG
GCACCGTGATCGACCTTCTCATTTGGCAGGTACCGCTTACAGATGGCAGT
GCTCAGCCCGTGCCGCCGCCTCGCAGTGACAACACCATCTTGTCTCAGGA
AGTCATGACCAGGGCTGCCACTACGCTGAACCTTTTCAGCCTGTGGCTGA
AGGAGCAGCTGGGTGCCTGTGACAGCGAGCTGCAAGCTATTCAGCGCCGT
GCGGAGCTGTTCGCATCAGAGAGGGCGTTCATGCAGCAGCTCAACACAGC
GCTACCACCAGATGATATGGACACCCGCAAGAACGCTTGGCTTGAACAGG
TATGTACTTCTATCTATGTATGCACACGTTGCCACCTAAGTGTATCGCCA
AAAGCATGCGCGGTCTACCGTCTCAGGGGCGTCCACAACGGCATTGTCTA
CATTGCCTGCAGCGGCACTGGCCAGCTGTGCACCATGCGAGACACCTTCA
CGCAGTTTGGCGACACGCCGCTCGCGAACAAGTACGCCTCGGACGTCTGG
GGCGGCAACGTTGAAGTTGAACTTGACGAGGAGGGCTGCGTCTTCGAGGA
CCACAACCAGGAGTGCTTCGACAAGCTGGTGAACGTGATGCGGCTGCGCG
CCATAGTGCGCAGGACTGGCTTCAGCGGCACGATAGGCAGCAGCAAGCCG
GCGCCCATGCCCGCCCACCTGGCGCCTACCATGACAAACATGCTGGAGTA
CCTGATGATCGACAGCAAGCACTTCTTCAGCTCCCTA
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