mRNA_17270 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|150170
Unique NamemRNA_17270
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|150170 vs. uniprot
Match: A0A835Z333_9STRA (NLI interacting factor (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z333_9STRA)

HSP 1 Score: 393 bits (1010), Expect = 1.620e-138
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 1
Query:    1 LTVVLDMDECLLHSKFHGAGAVSTTYRQEEDRPETVGEVNSFWLALDDGVAQVNIRPGLHEFLEQLAQMCDVVVFTAAMPDYAGPVLDRIDPTGKLISRRLYRNSCRQVRGVFLKDLSALGSAFATNPGRCVLLDNNPCSFLCQPTNGILVTSFYDDARDTALACVMQLVRLLESVPDVRPILRDMFRLEALLKE 585
            LTVVLDMDECLLHSKFHGAGAVSTTYRQEEDRPETVGEVNSFWLALDDGVAQVNIRPGLHEFLEQLAQMCDVVVFTAAMPDYAGPVLDRIDPTGKLISRRLYRNSCRQVRGVFLKDLSALGSAFATNPGRCVLLDNNPCSFLCQPTNGILVTSFYDDARDTALACVMQLVRLLESVPDVRPILRDMFRLEALLKE
Sbjct:    1 LTVVLDMDECLLHSKFHGAGAVSTTYRQEEDRPETVGEVNSFWLALDDGVAQVNIRPGLHEFLEQLAQMCDVVVFTAAMPDYAGPVLDRIDPTGKLISRRLYRNSCRQVRGVFLKDLSALGSAFATNPGRCVLLDNNPCSFLCQPTNGILVTSFYDDARDTALACVMQLVRLLESVPDVRPILRDMFRLEALLKE 195          
BLAST of jgi.p|Trimin1|150170 vs. uniprot
Match: A0A836C7A9_9STRA (NLI interacting factor-like phosphatase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7A9_9STRA)

HSP 1 Score: 323 bits (829), Expect = 1.470e-109
Identity = 156/195 (80.00%), Postives = 176/195 (90.26%), Query Frame = 1
Query:    1 LTVVLDMDECLLHSKFHGAGAVSTTYRQEEDRPETVGEVNSFWLALDDGVAQVNIRPGLHEFLEQLAQMCDVVVFTAAMPDYAGPVLDRIDPTGKLISRRLYRNSCRQVRGVFLKDLSALGSAFATNPGRCVLLDNNPCSFLCQPTNGILVTSFYDDARDTALACVMQLVRLLESVPDVRPILRDMFRLEALLKE 585
            LTV+LDMDECLLHSKFHG G++   YRQ+E+RPE +GEVNSF + LDDGVAQVNIRPGLH+FLE+LA+ CDVVVFTAAMPDYAGPVLD++DPTG+LIS+RLYR+SCRQVRG FLKDLS LG  F  +PGRCVLLDNNPCSFLCQPTNGILVTSFYDDA DTALA V+QLV+ LE  PDVRPILRDMFRLE+LL+E
Sbjct:   29 LTVILDMDECLLHSKFHGLGSID--YRQQEERPEDIGEVNSFCIPLDDGVAQVNIRPGLHDFLEELAKTCDVVVFTAAMPDYAGPVLDKLDPTGRLISKRLYRSSCRQVRGAFLKDLSVLGPVFDKHPGRCVLLDNNPCSFLCQPTNGILVTSFYDDAEDTALASVLQLVQHLEHAPDVRPILRDMFRLESLLRE 221          
BLAST of jgi.p|Trimin1|150170 vs. uniprot
Match: D7FM26_ECTSI (Putative nuclear LIM interactor-interacting protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM26_ECTSI)

HSP 1 Score: 270 bits (691), Expect = 4.640e-88
Identity = 139/196 (70.92%), Postives = 156/196 (79.59%), Query Frame = 1
Query:    1 LTVVLDMDECLLHSKFHGAGAVSTTYRQEEDRPETVGEVNSFWLALDDG-VAQVNIRPGLHEFLEQLAQMCDVVVFTAAMPDYAGPVLDRIDPTGKLISRRLYRNSCRQVRGVFLKDLSALGSAFATNPGRCVLLDNNPCSFLCQPTNGILVTSFYDDARDTALACVMQLVRLLESVPDVRPILRDMFRLEALLKE 585
            +TVVLDMDECLLHSKFHG GA S  YRQ E+RP+ V EVNSFW+ALDDG  AQVN RPGL  FLE LA+  + +VFTAAMPDYAGPVLD IDP G L  RRLYR+SCRQV+G FLKDLS LG   +T+  R VL+DNNP SF+CQPTNGILV SFYDD  DTALA VMQL+R L+   DVRPIL+DMFRL+ LL E
Sbjct:    1 MTVVLDMDECLLHSKFHGPGAASEAYRQLEERPDAVNEVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVE-STDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGE 195          
BLAST of jgi.p|Trimin1|150170 vs. uniprot
Match: A0A6H5L173_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L173_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 4.290e-86
Identity = 139/196 (70.92%), Postives = 155/196 (79.08%), Query Frame = 1
Query:    1 LTVVLDMDECLLHSKFHGAGAVSTTYRQEEDRPETVGEVNSFWLALDDG-VAQVNIRPGLHEFLEQLAQMCDVVVFTAAMPDYAGPVLDRIDPTGKLISRRLYRNSCRQVRGVFLKDLSALGSAFATNPGRCVLLDNNPCSFLCQPTNGILVTSFYDDARDTALACVMQLVRLLESVPDVRPILRDMFRLEALLKE 585
            +TVVLDMDECLLHSKFHG GA S  YRQ E+RP  V EVNSFW+ALDDG  AQVN RPGL  FLE LA+  + +VFTAAMPDYAGPVLD IDP G L  RRLYR+SCRQV+G FLKDLS LG   +T+  R VL+DNNP SF+CQPTNGILV SFYDD  DTALA VMQL+R L+   DVRPIL+DMFRL+ LL E
Sbjct:  127 MTVVLDMDECLLHSKFHGPGAASEAYRQLEERPNAVNEVNSFWVALDDGDTAQVNKRPGLDPFLEALARDYNTIVFTAAMPDYAGPVLDYIDPKGTLFHRRLYRSSCRQVKGAFLKDLSVLGVE-STDMSRTVLVDNNPLSFICQPTNGILVASFYDDPNDTALASVMQLIRHLDQAGDVRPILKDMFRLDTLLGE 321          
BLAST of jgi.p|Trimin1|150170 vs. uniprot
Match: A0A836CB86_9STRA (Putative CTD small phosphatase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB86_9STRA)

HSP 1 Score: 174 bits (442), Expect = 9.620e-52
Identity = 106/199 (53.27%), Postives = 130/199 (65.33%), Query Frame = 1
Query:    1 LTVVLDMDECLLHSKFHGAGAVSTTYRQEEDRPETVGEVNSFWLALDDGVAQV--NIRPGLHEFLEQLAQMCDVVVFTAAMPDYAGPVLDRIDPTGKLISRRLYRNSCRQVRG-VFLKDLSA-LGSAFATNPGRCVLLDNNPCSFLCQPTNGILVTSFYDDARDTALACVMQLVRLLESVPDVRPILRDMFRLEALLKE 585
            LTVVLD+DECL+HS F         YRQ E RPE +  V+S  L L  GV  V  N RPGL +FLEQL+    VVVFTA   +YA  VLD IDP G     RLYR SCRQ RG ++LKDL   +G A      R VL+DN+P SF+CQP+NGILV+S+YDD  D AL+ V++L+R L++  DVRP L  +F LE +LKE
Sbjct:   18 LTVVLDLDECLVHSVFPNGDK----YRQSEARPENINLVDSMHLVLG-GVEPVVVNRRPGLTKFLEQLSVDYHVVVFTAGRKEYAEEVLDAIDPQGTFFHHRLYRCSCRQARGNIYLKDLDRPVGEALE----RTVLVDNSPLSFICQPSNGILVSSWYDDPHDNALSSVLKLIRHLDACDDVRPTLTALFGLEPVLKE 207          
BLAST of jgi.p|Trimin1|150170 vs. uniprot
Match: H3GXJ8_PHYRM (FCP1 homology domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=H3GXJ8_PHYRM)

HSP 1 Score: 174 bits (441), Expect = 2.200e-51
Identity = 98/197 (49.75%), Postives = 126/197 (63.96%), Query Frame = 1
Query:    1 LTVVLDMDECLLHSKFHGAGAVSTTYRQEEDRPETVGE-VNSFWLALDDGV-AQVNIRPGLHEFLEQLAQMCDVVVFTAAMPDYAGPVLDRIDPTGKLISRRLYRNSCRQVRGVFLKDLSALGSAFATNPGRCVLLDNNPCSFLCQPTNGILVTSFYDDARDTALACVMQLVRLLESVPDVRPILRDMFRLEALLKE 585
            L +VLDMDECL+HSKF         YRQ E RPE + +  +SF + +DDG  A VN RPGL  FLE+ A+  DV VFTA +  Y  P+LD +DP G L + R +R SC+Q +G+FLKDLS +      +  R +L+DNNP SFL QP+NGI V SFYDDA D  L  + +++  L+ V DVRP L  +FRL  LL E
Sbjct:   41 LALVLDMDECLVHSKFQN----EVEYRQSEFRPEQLEDFADSFEIVMDDGERAVVNKRPGLDRFLEEAAKHYDVYVFTAGLEAYGKPILDELDPKGNLFAGRFFRESCQQRKGMFLKDLSVVRGG---DLSRVILVDNNPVSFLMQPSNGIPVPSFYDDANDRTLESLSKVLASLQEVEDVRPRLHQLFRLADLLAE 230          
BLAST of jgi.p|Trimin1|150170 vs. uniprot
Match: A0A662Y5D0_9STRA (FCP1 homology domain-containing protein n=4 Tax=Peronosporaceae TaxID=4777 RepID=A0A662Y5D0_9STRA)

HSP 1 Score: 172 bits (435), Expect = 1.820e-50
Identity = 98/197 (49.75%), Postives = 125/197 (63.45%), Query Frame = 1
Query:    1 LTVVLDMDECLLHSKFHGAGAVSTTYRQEEDRPETVGEV-NSFWLALDDGV-AQVNIRPGLHEFLEQLAQMCDVVVFTAAMPDYAGPVLDRIDPTGKLISRRLYRNSCRQVRGVFLKDLSALGSAFATNPGRCVLLDNNPCSFLCQPTNGILVTSFYDDARDTALACVMQLVRLLESVPDVRPILRDMFRLEALLKE 585
            L +VLDMDECL+HSKF         YRQ E RPE +    +SF + +DDG  A VN RPGL  FLE+ A+  DV VFTA +  Y  P+LD +DP G L + R +R SC+Q +G+FLKDLS +     T+  R +L+DNNP SFL QP+NGI V SFYDD  D  L  + +++  L+ V DVRP L  +FRL  LL E
Sbjct:   43 LALVLDMDECLVHSKFQN----EVEYRQSEYRPEELEAYGDSFEIVMDDGERAVVNKRPGLDRFLEEAAKHFDVYVFTAGLEAYGKPILDELDPKGNLFAGRFFRASCQQRKGMFLKDLSVV----RTDLSRVILVDNNPVSFLLQPSNGIPVPSFYDDVNDRTLDSLTKVLASLQEVDDVRPRLHQLFRLADLLAE 231          
BLAST of jgi.p|Trimin1|150170 vs. uniprot
Match: A0A3M6VFT3_9STRA (FCP1 homology domain-containing protein n=9 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VFT3_9STRA)

HSP 1 Score: 170 bits (431), Expect = 7.100e-50
Identity = 94/197 (47.72%), Postives = 126/197 (63.96%), Query Frame = 1
Query:    1 LTVVLDMDECLLHSKFHGAGAVSTTYRQEEDRPETVGE-VNSFWLALDDGV-AQVNIRPGLHEFLEQLAQMCDVVVFTAAMPDYAGPVLDRIDPTGKLISRRLYRNSCRQVRGVFLKDLSALGSAFATNPGRCVLLDNNPCSFLCQPTNGILVTSFYDDARDTALACVMQLVRLLESVPDVRPILRDMFRLEALLKE 585
            + +VLDMDECL+HSKF         YRQ E RPE + E ++SF + ++DG  A VN RPGL  FLE+ A+  DV VFTA +  Y  P+LD +DP G L +   +R SC+Q +G+FLKDLS +      +  R +L+DNNP SFL QP+NGI V SFYDD +D  L  + +++  ++ V DVRP L  +FRL  LL E
Sbjct:   41 IALVLDMDECLVHSKFQN----EVEYRQNEYRPEQLEEYIDSFEIVMEDGERAVVNKRPGLDRFLEEAAKHYDVYVFTAGLEAYGKPILDVLDPKGNLFAGHFFRESCKQRKGMFLKDLSVIRDG---DLSRVILVDNNPVSFLMQPSNGIPVPSFYDDTKDRTLESLSKVLASMQEVEDVRPRLHQLFRLADLLAE 230          
BLAST of jgi.p|Trimin1|150170 vs. uniprot
Match: A0A8K1CRD5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRD5_PYTOL)

HSP 1 Score: 166 bits (420), Expect = 3.240e-48
Identity = 94/197 (47.72%), Postives = 128/197 (64.97%), Query Frame = 1
Query:    1 LTVVLDMDECLLHSKFHGAGAVSTTYRQEEDRPETVGEV-NSFWLALDDGV-AQVNIRPGLHEFLEQLAQMCDVVVFTAAMPDYAGPVLDRIDPTGKLISRRLYRNSCRQVRGVFLKDLSALGSAFATNPGRCVLLDNNPCSFLCQPTNGILVTSFYDDARDTALACVMQLVRLLESVPDVRPILRDMFRLEALLKE 585
            + +VLDMDECL+HSKF+   A    YRQ+E RPE++ E  +SF + ++DG  A V  RPGL  FLE+ ++  D+ VFTA +  Y  P+LD +DP G + + R +R SC+  +G+FLKDL  + S  +    R +L+DNNP SFL QP+NGI V SFYDDA D  L  +M+++  L  V DVRP L  +FRL  LL E
Sbjct:   41 IALVLDMDECLVHSKFYNEMA---EYRQDEYRPESLQEYEDSFDIEMEDGERAIVYKRPGLDRFLEEASKHFDLYVFTAGLEAYGKPILDELDPKGTIFAGRFFRESCQMRKGMFLKDLRVVRSDMS----RVILVDNNPVSFLMQPSNGIPVPSFYDDAADRTLDSLMKVLMSLTEVEDVRPRLHQLFRLADLLSE 230          
BLAST of jgi.p|Trimin1|150170 vs. uniprot
Match: A0A4D9D0R5_9STRA (FCP1 homology domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0R5_9STRA)

HSP 1 Score: 169 bits (428), Expect = 7.450e-48
Identity = 100/219 (45.66%), Postives = 130/219 (59.36%), Query Frame = 1
Query:    1 LTVVLDMDECLLHSKFH-----------------GAGAVSTTYRQEEDRPETVGEVNS-----FWLALDDGV-AQVNIRPGLHEFLEQLAQMCDVVVFTAAMPDYAGPVLDRIDPTGKLISRRLYRNSCRQVRGVFLKDLSALGSAFA-TNPGRCVLLDNNPCSFLCQPTNGILVTSFYDDARDTALACVMQLV-RLLESVPDVRPILRDMFRLEALLK 582
            LTVVLDMDECLLHS+F                     + S  Y+ + D  E +G+V       FWL L++G   +VN+RPG+  FL++L+   +V VFTAA   YA PVLDR+DPTG L+  R YR +CR V G +LKDL  + +     +  R VL+DNNP SF+ QP NGILV SFYDD  D  L  V +L+ R L  + DVRP L D+F+L A L+
Sbjct:  125 LTVVLDMDECLLHSRFEEDMRDERGRELAHQLLPNGDSESFHYQHQADIGEALGDVRHRSVDYFWLELEEGERVRVNLRPGVEAFLQRLSDEYNVFVFTAATETYARPVLDRLDPTGSLLDGRFYRPACRHVHGTYLKDLRRIQAGLGKADLSRVVLVDNNPLSFVPQPENGILVPSFYDDVEDRTLEAVGELIDRRLAPLDDVRPFLGDLFQLRAQLQ 343          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|150170 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z333_9STRA1.620e-138100.00NLI interacting factor (Fragment) n=1 Tax=Tribonem... [more]
A0A836C7A9_9STRA1.470e-10980.00NLI interacting factor-like phosphatase-domain-con... [more]
D7FM26_ECTSI4.640e-8870.92Putative nuclear LIM interactor-interacting protei... [more]
A0A6H5L173_9PHAE4.290e-8670.92FCP1 homology domain-containing protein n=1 Tax=Ec... [more]
A0A836CB86_9STRA9.620e-5253.27Putative CTD small phosphatase-like protein n=1 Ta... [more]
H3GXJ8_PHYRM2.200e-5149.75FCP1 homology domain-containing protein n=12 Tax=P... [more]
A0A662Y5D0_9STRA1.820e-5049.75FCP1 homology domain-containing protein n=4 Tax=Pe... [more]
A0A3M6VFT3_9STRA7.100e-5047.72FCP1 homology domain-containing protein n=9 Tax=Pe... [more]
A0A8K1CRD5_PYTOL3.240e-4847.72Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A4D9D0R5_9STRA7.450e-4845.66FCP1 homology domain-containing protein n=4 Tax=Mo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_195contigContig_195:126598..128073 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|150170|gw1.195.34.1
BRITEko00000,ko01000,ko01009,ko03021
KEGG koko:K15731,ko:K17616
EC3.1.3.16
GOsGO:0003674,GO:0003824,GO:0004721,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0036211,GO:0042578,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:0140096,GO:1901564
Descriptionphosphoprotein phosphatase activity
COG categoryK
Max annot lvl2759|Eukaryota
EggNOG OGsCOG5190@1|root,KOG1605@2759|Eukaryota
Evalue7.61e-89
Seed ortholog2880.D7FM26
Hectar predicted targeting categoryother localisation
TranscriptId150492
TrackFilteredModels1
ProteinId150170
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|150170gene_17270Tribonema minus UTEX_B_3156 geneContig_195 126598..128073 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_17270_1exon_17270_1Tribonema minus UTEX_B_3156 exonContig_195 126598..126624 +
exon_17270_2exon_17270_2Tribonema minus UTEX_B_3156 exonContig_195 126886..127014 +
exon_17270_3exon_17270_3Tribonema minus UTEX_B_3156 exonContig_195 127279..127564 +
exon_17270_4exon_17270_4Tribonema minus UTEX_B_3156 exonContig_195 127931..128073 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_17270CDS_17270Tribonema minus UTEX_B_3156 CDSContig_195 126598..126624 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|150170Trimin1|150170|gw1.195.34.1Tribonema minus UTEX_B_3156 polypeptideContig_195 126598..128073 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_17270 ID=mRNA_17270|Name=jgi.p|Trimin1|150170|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=585bp|location=Sequence derived from alignment at Contig_195:126598..128073+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
TTAACTGTAGTGCTGGATATGGACGAGTGCCTGCTACATTCGAAGTTCCA
CGGCGCTGGTGCTGTCAGCACCACCTACAGGCAGGAGGAGGACAGACCAG
AGACCGTGGGGGAAGTAAACAGCTTCTGGCTGGCCCTGGATGACGGAGTC
GCACAGGTCAACATCCGACCAGGGCTTCACGAGTTCCTGGAGCAGCTCGC
CCAGATGTGCGATGTGGTGGTGTTCACCGCGGCCATGCCGGACTACGCGG
GGCCCGTGCTTGACCGCATCGACCCCACTGGAAAGCTGATCTCTCGGAGA
CTGTACAGGAATTCCTGTAGGCAGGTGCGGGGGGTGTTTCTCAAGGATCT
GTCGGCGCTGGGCTCGGCGTTCGCCACCAACCCCGGGCGGTGCGTGCTGC
TCGACAACAACCCGTGCAGCTTCCTGTGCCAGCCTACGAACGGCATCCTC
GTCACGAGCTTCTACGACGACGCGCGCGACACGGCGCTCGCGTGCGTCAT
GCAGCTCGTGCGCCTCCTCGAGAGCGTCCCCGACGTGCGCCCGATCCTGC
GCGACATGTTCCGCCTCGAGGCGCTGCTCAAGGAG
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protein sequence of jgi.p|Trimin1|150170

>Trimin1|150170|gw1.195.34.1 ID=Trimin1|150170|gw1.195.34.1|Name=jgi.p|Trimin1|150170|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=195bp
LTVVLDMDECLLHSKFHGAGAVSTTYRQEEDRPETVGEVNSFWLALDDGV
AQVNIRPGLHEFLEQLAQMCDVVVFTAAMPDYAGPVLDRIDPTGKLISRR
LYRNSCRQVRGVFLKDLSALGSAFATNPGRCVLLDNNPCSFLCQPTNGIL
VTSFYDDARDTALACVMQLVRLLESVPDVRPILRDMFRLEALLKE
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mRNA from alignment at Contig_195:126598..128073+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_17270 ID=mRNA_17270|Name=jgi.p|Trimin1|150170|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1476bp|location=Sequence derived from alignment at Contig_195:126598..128073+ (Tribonema minus UTEX_B_3156 )
TTAACTGTAGTGCTGGATATGGACGAGGTGAGCCCAGCTCTCGTGTGCCG CATGCTAAACGGATGCGCCTCTTTCGCGTCATGCTCTCTTAGCTTAGCTG CCGCACTAGCGCATCTCCAGCGAGTAAATGCTTAGTCTGCGGTACCTGCG TGCCTCACGATCCGTCGGCGTTGAGTTGCGTGATCCCCGCGTGTGCGTGT CCATTCTGCTCTCACTGCAGCTGAGATGCCGCCTTCGCATCTCAGTCGGC TCACTCACCGCTCGGCATGCTGCTGCTCTCTGCTTCAGTGCCTGCTACAT TCGAAGTTCCACGGCGCTGGTGCTGTCAGCACCACCTACAGGCAGGAGGA GGACAGACCAGAGACCGTGGGGGAAGTAAACAGCTTCTGGCTGGCCCTGG ATGACGGAGTCGCACAGGTACGCATCTACTGCACACCTTGCTCCAGTCAC CCCCATCGCGGCTCTGCAGTTCATTTGTTCTGCTGCATCAAGCATGTATC GCAGCCCACGCACCCCCAGCAGCAGCGGATTGGTAGTGTTGGCAAATGGC AGCTCTGGACATGAGTCACTGCGCCCCCCACGTGGCGGCGTGGCGCTGGG TGCGTAAGCCTGACTGTCGCCTTCACTTGCAGCTGCCGCATGTGGCTCAT TTCAAATGCGCAAATGTGCTCTTGTTCGCAGGTCAACATCCGACCAGGGC TTCACGAGTTCCTGGAGCAGCTCGCCCAGATGTGCGATGTGGTGGTGTTC ACCGCGGCCATGCCGGACTACGCGGGGCCCGTGCTTGACCGCATCGACCC CACTGGAAAGCTGATCTCTCGGAGACTGTACAGGAATTCCTGTAGGCAGG TGCGGGGGGTGTTTCTCAAGGATCTGTCGGCGCTGGGCTCGGCGTTCGCC ACCAACCCCGGGCGGTGCGTGCTGCTCGACAACAACCCGTGCAGCTTCCT GTGCCAGCCTACGAACGGTGAGCCTCATTGAATCCTCGTGTTGGCGCTGT AGCAGACATGTAAACCCTGCTCCATTGCTCCTCACTTAGTGTGCCGAAGC TGCCTGTGTAGTAGACTTAGAGCGACTTCAGACGCGGGAACCGTGCGCGC TCACAAACATCCCTCTTTGCATCCGCAATGATCCGGCATTTTTCATGACG ATTTAGAGAAGTTATGTGAGACACACAACTGAACCCGTCAGGGCATCTGC ACCTCGACCCCGGTCGCAGCTCTGAAACCCTCATCACAGATCCTCATCGC AGCACGTGTCTCAGCCATGCCGCGTTCCACCGCGCAACCTCGCTCACAAG CCCCCCAACCCATGCGCTGCCACCGTGCGAAAGGCATCCTCGTCACGAGC TTCTACGACGACGCGCGCGACACGGCGCTCGCGTGCGTCATGCAGCTCGT GCGCCTCCTCGAGAGCGTCCCCGACGTGCGCCCGATCCTGCGCGACATGT TCCGCCTCGAGGCGCTGCTCAAGGAG
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Coding sequence (CDS) from alignment at Contig_195:126598..128073+

>mRNA_17270 ID=mRNA_17270|Name=jgi.p|Trimin1|150170|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=585bp|location=Sequence derived from alignment at Contig_195:126598..128073+ (Tribonema minus UTEX_B_3156 )
TTAACTGTAGTGCTGGATATGGACGAGTGCCTGCTACATTCGAAGTTCCA
CGGCGCTGGTGCTGTCAGCACCACCTACAGGCAGGAGGAGGACAGACCAG
AGACCGTGGGGGAAGTAAACAGCTTCTGGCTGGCCCTGGATGACGGAGTC
GCACAGGTCAACATCCGACCAGGGCTTCACGAGTTCCTGGAGCAGCTCGC
CCAGATGTGCGATGTGGTGGTGTTCACCGCGGCCATGCCGGACTACGCGG
GGCCCGTGCTTGACCGCATCGACCCCACTGGAAAGCTGATCTCTCGGAGA
CTGTACAGGAATTCCTGTAGGCAGGTGCGGGGGGTGTTTCTCAAGGATCT
GTCGGCGCTGGGCTCGGCGTTCGCCACCAACCCCGGGCGGTGCGTGCTGC
TCGACAACAACCCGTGCAGCTTCCTGTGCCAGCCTACGAACGGCATCCTC
GTCACGAGCTTCTACGACGACGCGCGCGACACGGCGCTCGCGTGCGTCAT
GCAGCTCGTGCGCCTCCTCGAGAGCGTCCCCGACGTGCGCCCGATCCTGC
GCGACATGTTCCGCCTCGAGGCGCTGCTCAAGGAG
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