mRNA_17096 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Match: A0A835Z3Z8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Z8_9STRA) HSP 1 Score: 607 bits (1564), Expect = 3.680e-219 Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 1 Query: 1 KKQLKKAEKRGREDRAKPRLETFAGHDKAPRKADLKRKLEVSRLKRAAAKQEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPIIGAEPENPHWQEQGEDLFALKGEAFSSHPACRTYLDLKCQLGGACLAAGKSKDAIQHFERCLVLDPSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEAALWQDLEGAAEWIAGWLIARAAPAPQP 927 KKQLKKAEKRGREDRAKPRLETFAGHDKAPRKADLKRKLEVSRLKRAAAKQEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPIIGAEPENPHWQEQGEDLFALKGEAFSSHPACRTYLDLKCQLGGACLAAGKSKDAIQHFERCLVLDPSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEAALWQDLEGAAEWIAGWLIARAAPAPQP Sbjct: 1 KKQLKKAEKRGREDRAKPRLETFAGHDKAPRKADLKRKLEVSRLKRAAAKQEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPIIGAEPENPHWQEQGEDLFALKGEAFSSHPACRTYLDLKCQLGGACLAAGKSKDAIQHFERCLVLDPSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEAALWQDLEGAAEWIAGWLIARAAPAPQP 309
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Match: A0A5D6XJ64_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJ64_9STRA) HSP 1 Score: 169 bits (427), Expect = 4.220e-46 Identity = 106/283 (37.46%), Postives = 160/283 (56.54%), Query Frame = 1 Query: 70 AGHDKAPRKADLKRKLEVSRLKRAAAKQEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPI---IGAEPENPHWQEQGE-----DLFA--LKGEAFSSHPACRTYLDLKCQLGGACLAAGKSKDAIQHFERCLVLDPSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEAALWQDLEGAAEWIA 888 +G DK +A +R++ V +L+RA ++E+ L+ + P + TP P + S+W+L+GAARPA + I A + H E + DL+A L+ FS+HP R YL + +L AC AG + I+H+E C+ LD +D++R+R GL L+D AR LIERF+ AVL++ V IEY+SW +L E GS E V AAL A+ NPF+A ++ + F V+E+V++I++P ++EEAF YCS +W D GA W+A Sbjct: 30 SGKDK---RAQNRRRMRVVQLQRALTRKEQELKAF-PVQPVTPRPPPRK--------GPTPVSEWKLKGAARPAALLARIAAGELDEHGDELRKPVETFDLYAQTLRENQFSTHPETREYLRIMKELAEACCNAGMADHGIRHYETCMTLDTNDSMRSREGLACVLVDEGRGAEARELIERFQGQQDSAVLAYCQVIIEYVSWEVLEEPGSSEEVVRAALLKAFKLNPFIAVFISAHETFFQVVEFVEEIKEPVSGSIEEAFVYCSQNIGVWLDTVGADAWVA 300
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Match: K3W4X0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W4X0_GLOUD) HSP 1 Score: 157 bits (396), Expect = 1.400e-41 Identity = 99/271 (36.53%), Postives = 146/271 (53.87%), Query Frame = 1 Query: 106 KRKLEVSRLKRAAAKQEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPIIGAEPENPHWQEQGEDL-----------FALKGEAFSSHPACRTYLDLKCQLGGACLAAGKSKDAIQHFERCLVLDPSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEAALWQDLEGAAEWI 885 ++++ V +L+RA ++E+ L+ + PK P P R+ S+W+L+GAARPA ++ A E G++L L FS+H R YL + QL AC AG I+H+E C+ LD D++R+R GL L+D AR LI++F + AVL++ V +EY+SW +L E+GS E V A A+ NPF+A +A + F V+EYVDDI++P ++EEAFQYCS +W D GA WI Sbjct: 39 RKRMRVVQLQRALDRKEKELKAF--PKYPAPPKPPPRK-------GPTPPSEWKLKGAARPAALL-ARIAAGELDEHGDELKKPIETYNLYEATLNAGNFSTHVETREYLRIMKQLAEACCNAGMPDRGIKHYETCMQLDTEDSMRSREGLTCVLVDEGRGAEARELIDKFSG-EASAVLAYCQVILEYVSWEVLEEEGSSEEVVREAFLKAFKLNPFIAVFIAAHETFFQVVEYVDDIKEPKSGSIEEAFQYCSQNIGVWLDTVGAFAWI 298
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Match: G5A291_PHYSP (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=G5A291_PHYSP) HSP 1 Score: 149 bits (375), Expect = 1.990e-38 Identity = 98/276 (35.51%), Postives = 149/276 (53.99%), Query Frame = 1 Query: 91 RKADLKRKLEVSRLKRAAAKQEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPIIGAEPENPHWQEQGE---------DLFAL--KGEAFSSHPACRTYLDLKCQLGGACLAAGKSKDAIQHFERCLVLDPSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEAALWQDLEGAAEWI 885 +K +R++ V +L+R+ ++ + LR + PK P P R+ D S+W+L+GAARPA ++ A+ E G DL+A K + H + Y+ L QL C AG I+++E C+ LD +D+ +R GL AL+D AR LI++ D + AVL++ V IEY+SW +L E+GS E V AA A+A NPF+A +A+ + F V+EYV++I+DP ++EEAF Y S +W D GA +WI Sbjct: 36 KKTQNRRRMRVVQLQRSVDRKLQELRAF--PKNPPPPKPAPRK-------GPKDPSEWKLKGAARPAALL-AKIAAGELDECGNEFPKPIETFDLYAQVEKQGKLAEHKDTKEYISLLKQLAAGCCEAGMPDRGIKNYELCMSLDKTDSFHSREGLACALVDEGRGAEARTLIDKHTD-EQSAVLAYCQVIIEYVSWEVLEEEGSSEEVVQAAFRKAFALNPFMAVVIAYHETFFQVMEYVEEIKDPKRGSIEEAFVYASQNIGVWMDTVGAYQWI 300
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Match: A0A0P1AIT8_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIT8_PLAHL) HSP 1 Score: 145 bits (367), Expect = 1.120e-37 Identity = 102/278 (36.69%), Postives = 148/278 (53.24%), Query Frame = 1 Query: 91 RKADLKRKLEVSRLKRAAAKQEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPII-----------GAEPENPHWQEQGEDLF--ALKGEAFSSHPACRTYLDLKCQLGGACLAAGKSKDAIQHFERCLVLDPSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEAALWQDLEGAAEWI 885 +K +R++ V +L+R ++ + LR + PK TP P + R+ SKW+L+GAARPA ++ G E P + DL+ AL+ + H Y+ L QL AC AG I+ +E C+ LD +D +R+ GLV L+D ARALIE+ D + AVL++ V IEY+SW +L E+GS EA AL AY NPF+A +A+ D F V+EYVD+I++P ++EEAF+Y +W D GA WI Sbjct: 7 KKQQNRRRMRVVQLQRLVDRKLQDLRAF--PK--TPPSPTASARK-----GPTSPSKWKLKGAARPAALLARIAAGELDECGNEYPKP---VETFDLYEKALRDGDLAQHKDIVEYISLLKQLAVACCEAGMPDRGIKSYELCMTLDKNDTIRSCEGLVCVLIDEGRGVDARALIEKHMD-EKSAVLAYCEVIIEYVSWEVLEEEGSSEAAVQKALRKAYELNPFIAVVIAYHDTFLQVVEYVDEIKNPKRGSIEEAFRYVLKNIGVWVDTVGACHWI 271
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Match: A0A3R7W379_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7W379_9STRA) HSP 1 Score: 142 bits (358), Expect = 6.920e-36 Identity = 88/222 (39.64%), Postives = 122/222 (54.95%), Query Frame = 1 Query: 256 SKWQLRGAARPAPIIGAEPENPHWQEQGEDLFALKGEAF------------SSHPACRTYLDLKCQLGGACLAAGKSKDAIQHFERCLVLDPSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEAALWQDLEGAAEWI 885 S+W+L GAARPA ++ A+ E G++ F E F + + R Y+ L +L AC A I+++E C+ LD +D+ +R GL AL+D ARALIE+ D D AVL++ V IEY+SW +L E GS E V AA A+ NPF+A +A+ + F V+EYVDDIRDP ++EEAF Y S +W D GA +WI Sbjct: 90 SEWKLTGAARPAALV-AKIAAGELDECGDE-FPKPVETFDLYEKMRQEGKLAENKDTREYISLLKRLAAACCEAAIPDRGIKNYELCMSLDTTDSFHSREGLACALVDEGRGAEARALIEQHTD-DESAVLAYCQVIIEYVSWEVLDESGSSEKVVQAAFRKAFRLNPFMAVVIAYHETFFQVMEYVDDIRDPKRGSIEEAFVYVSQNIGVWMDTVGAYQWI 308
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Match: A0A7S2RPG7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RPG7_9STRA) HSP 1 Score: 109 bits (272), Expect = 2.380e-23 Identity = 81/245 (33.06%), Postives = 116/245 (47.35%), Query Frame = 1 Query: 247 LDTSKWQLRGAARPAPII-------------GAEPENPHWQEQGEDLFALKG---------EAFSSHPACRTYLDLKCQLGGACLAAGKSKDAIQHFERCLVLDPSD----AVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEA-ALWQDLEGAAEWIAGWLI 900 L W+LRGAARPA + E Q L KG E+ + CR YL L QLG L A K K A + F RC+ L+ +D AR L+R +D + D AR L E TD+ + +S IE++SW++L E+GS++ A L A +N F A+ +AF D F +V+EY D++ D ++E+A +YC+ E W E A +WI L+ Sbjct: 127 LGPETWKLRGAARPAYEVYDFDTRYVDVHLKAHEEAKIKGQRIRNILSVYKGHFCQKAQEKESENLKRVCRLYLSLLMQLGLLNLEAKKFKTARETFMRCIELEGTDHDVPVTNARSQLMRMYLDNNRPDSARRLWEEL-PTDSSVWVRYSAALIEFVSWKILEEEGSNKETAEINLAKAIRSNLFCAYYIAFHDTFKEVMEYTDEVEDAENGSIEQAIEYCNSEQMGSWLGTEDAIQWIRSVLL 370
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Match: A0A7S2E5K4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E5K4_9STRA) HSP 1 Score: 108 bits (271), Expect = 6.610e-23 Identity = 78/244 (31.97%), Postives = 115/244 (47.13%), Query Frame = 1 Query: 247 LDTSKWQLRGAARPA------------PIIGAEPENPHWQEQGEDLFAL-KGE---------------AFSSHPACRTYLDLKCQLGGACLAAGKSKDAIQHFERCLVLD--PSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEA-ALWQDLEGAAEWI 885 L W+LRGAARPA P + A + ++ ++ + KG+ P CR +L L QLG + A K K A + F C+ LD S AR L+R ++ + AR L ER TD + + +S IEY+SW+LL EDGS + A L A AN + A+ +A+ D F V+EY +++ D T+EEA +YC+ E W +GA +W+ Sbjct: 143 LGPETWKLRGAARPAWEVYDFDTRYVDPHLEAHQKAKEKAQRIRNILTIFKGQFGRMESKEEEDGETKPLPPQPHCRRFLSLLMQLGLLNMEAKKYKAAREVFLECIDLDGITSPVTNARCRLMRMYLEANRPASARRLWERLPQTDNSSWIRYSAALIEYVSWKLLEEDGSSQQTAELYLVRAIKANIYCAYHIAYHDTFESVVEYAEEVEDAEERTLEEAIEYCASEQMGTWVGTDGAIDWM 386
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Match: A0A2P4Y4B9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y4B9_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 9.480e-21 Identity = 60/139 (43.17%), Postives = 83/139 (59.71%), Query Frame = 1 Query: 511 ARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAA---NPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEAALWQDLEGAAEWIAGWLIARAAPA 918 +R GL AL+D ARALIE +D ++ AVL++ V IEY+SW +L E+GS E V A A+ A NPF+A +A+ + F V+EYVD+I++P ++EEAF Y S +W D GA +WI L A PA Sbjct: 1 SREGLACALVDEGRGAEARALIEEHKDEES-AVLAFCQVIIEYVSWEVLEEEGSSEEVVQKAFRKAFVAFVLNPFMAVVIAYHETFFQVMEYVDEIKNPKRGSIEEAFVYVSQNIGVWVDTVGAYQWIEKELNELAEPA 138
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Match: D7FPV9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV9_ECTSI) HSP 1 Score: 92.4 bits (228), Expect = 2.740e-17 Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 1 Query: 1 KKQLKKAEKRGREDRA---KP-RLETFAGHDKAPRKADLKRKLEVSRLKRAAAKQEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPII----GAE--PENPHWQEQGEDLF 351 K++ ++AEKR ++ R KP ++ G++ P+K KR+LE++RL+R +KQEELLR+Y PP P PE +R+RRR+DFYDLDTS W+L GAARPA + G E E W E GEDLF Sbjct: 9 KREAERAEKRAKKRRKLGKKPLTVDRSGGYESQPKKHANKRRLELARLERLVSKQEELLRDYRPPVHVAPLDPELKRKRRRRDFYDLDTSHWKLTGAARPADSLPGAGGTELVNEREDW-EAGEDLF 134 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_17096 ID=mRNA_17096|Name=jgi.p|Trimin1|150685|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=927bp|location=Sequence derived from alignment at Contig_209:39845..40771- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. AAGAAGCAGCTCAAGAAGGCTGAAAAGCGCGGCCGTGAGGACAGGGCCAAback to top protein sequence of jgi.p|Trimin1|150685 >Trimin1|150685|gw1.209.32.1 ID=Trimin1|150685|gw1.209.32.1|Name=jgi.p|Trimin1|150685|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=309bp KKQLKKAEKRGREDRAKPRLETFAGHDKAPRKADLKRKLEVSRLKRAAAKback to top mRNA from alignment at Contig_209:39845..40771- Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_17096 ID=mRNA_17096|Name=jgi.p|Trimin1|150685|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=927bp|location=Sequence derived from alignment at Contig_209:39845..40771- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_209:39845..40771- >mRNA_17096 ID=mRNA_17096|Name=jgi.p|Trimin1|150685|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=927bp|location=Sequence derived from alignment at Contig_209:39845..40771- (Tribonema minus UTEX_B_3156 )back to top |