mRNA_17096 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|150685
Unique NamemRNA_17096
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Match: A0A835Z3Z8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3Z8_9STRA)

HSP 1 Score: 607 bits (1564), Expect = 3.680e-219
Identity = 309/309 (100.00%), Postives = 309/309 (100.00%), Query Frame = 1
Query:    1 KKQLKKAEKRGREDRAKPRLETFAGHDKAPRKADLKRKLEVSRLKRAAAKQEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPIIGAEPENPHWQEQGEDLFALKGEAFSSHPACRTYLDLKCQLGGACLAAGKSKDAIQHFERCLVLDPSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEAALWQDLEGAAEWIAGWLIARAAPAPQP 927
            KKQLKKAEKRGREDRAKPRLETFAGHDKAPRKADLKRKLEVSRLKRAAAKQEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPIIGAEPENPHWQEQGEDLFALKGEAFSSHPACRTYLDLKCQLGGACLAAGKSKDAIQHFERCLVLDPSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEAALWQDLEGAAEWIAGWLIARAAPAPQP
Sbjct:    1 KKQLKKAEKRGREDRAKPRLETFAGHDKAPRKADLKRKLEVSRLKRAAAKQEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPIIGAEPENPHWQEQGEDLFALKGEAFSSHPACRTYLDLKCQLGGACLAAGKSKDAIQHFERCLVLDPSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEAALWQDLEGAAEWIAGWLIARAAPAPQP 309          
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Match: A0A5D6XJ64_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJ64_9STRA)

HSP 1 Score: 169 bits (427), Expect = 4.220e-46
Identity = 106/283 (37.46%), Postives = 160/283 (56.54%), Query Frame = 1
Query:   70 AGHDKAPRKADLKRKLEVSRLKRAAAKQEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPI---IGAEPENPHWQEQGE-----DLFA--LKGEAFSSHPACRTYLDLKCQLGGACLAAGKSKDAIQHFERCLVLDPSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEAALWQDLEGAAEWIA 888
            +G DK   +A  +R++ V +L+RA  ++E+ L+ + P +  TP  P  +             S+W+L+GAARPA +   I A   + H  E  +     DL+A  L+   FS+HP  R YL +  +L  AC  AG +   I+H+E C+ LD +D++R+R GL   L+D      AR LIERF+     AVL++  V IEY+SW +L E GS E V  AAL  A+  NPF+A  ++  + F  V+E+V++I++P   ++EEAF YCS    +W D  GA  W+A
Sbjct:   30 SGKDK---RAQNRRRMRVVQLQRALTRKEQELKAF-PVQPVTPRPPPRK--------GPTPVSEWKLKGAARPAALLARIAAGELDEHGDELRKPVETFDLYAQTLRENQFSTHPETREYLRIMKELAEACCNAGMADHGIRHYETCMTLDTNDSMRSREGLACVLVDEGRGAEARELIERFQGQQDSAVLAYCQVIIEYVSWEVLEEPGSSEEVVRAALLKAFKLNPFIAVFISAHETFFQVVEFVEEIKEPVSGSIEEAFVYCSQNIGVWLDTVGADAWVA 300          
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Match: K3W4X0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W4X0_GLOUD)

HSP 1 Score: 157 bits (396), Expect = 1.400e-41
Identity = 99/271 (36.53%), Postives = 146/271 (53.87%), Query Frame = 1
Query:  106 KRKLEVSRLKRAAAKQEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPIIGAEPENPHWQEQGEDL-----------FALKGEAFSSHPACRTYLDLKCQLGGACLAAGKSKDAIQHFERCLVLDPSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEAALWQDLEGAAEWI 885
            ++++ V +L+RA  ++E+ L+ +  PK   P  P  R+            S+W+L+GAARPA ++ A        E G++L             L    FS+H   R YL +  QL  AC  AG     I+H+E C+ LD  D++R+R GL   L+D      AR LI++F   +  AVL++  V +EY+SW +L E+GS E V   A   A+  NPF+A  +A  + F  V+EYVDDI++P   ++EEAFQYCS    +W D  GA  WI
Sbjct:   39 RKRMRVVQLQRALDRKEKELKAF--PKYPAPPKPPPRK-------GPTPPSEWKLKGAARPAALL-ARIAAGELDEHGDELKKPIETYNLYEATLNAGNFSTHVETREYLRIMKQLAEACCNAGMPDRGIKHYETCMQLDTEDSMRSREGLTCVLVDEGRGAEARELIDKFSG-EASAVLAYCQVILEYVSWEVLEEEGSSEEVVREAFLKAFKLNPFIAVFIAAHETFFQVVEYVDDIKEPKSGSIEEAFQYCSQNIGVWLDTVGAFAWI 298          
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Match: G5A291_PHYSP (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=G5A291_PHYSP)

HSP 1 Score: 149 bits (375), Expect = 1.990e-38
Identity = 98/276 (35.51%), Postives = 149/276 (53.99%), Query Frame = 1
Query:   91 RKADLKRKLEVSRLKRAAAKQEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPIIGAEPENPHWQEQGE---------DLFAL--KGEAFSSHPACRTYLDLKCQLGGACLAAGKSKDAIQHFERCLVLDPSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEAALWQDLEGAAEWI 885
            +K   +R++ V +L+R+  ++ + LR +  PK   P  P  R+          D S+W+L+GAARPA ++ A+       E G          DL+A   K    + H   + Y+ L  QL   C  AG     I+++E C+ LD +D+  +R GL  AL+D      AR LI++  D +  AVL++  V IEY+SW +L E+GS E V  AA   A+A NPF+A  +A+ + F  V+EYV++I+DP   ++EEAF Y S    +W D  GA +WI
Sbjct:   36 KKTQNRRRMRVVQLQRSVDRKLQELRAF--PKNPPPPKPAPRK-------GPKDPSEWKLKGAARPAALL-AKIAAGELDECGNEFPKPIETFDLYAQVEKQGKLAEHKDTKEYISLLKQLAAGCCEAGMPDRGIKNYELCMSLDKTDSFHSREGLACALVDEGRGAEARTLIDKHTD-EQSAVLAYCQVIIEYVSWEVLEEEGSSEEVVQAAFRKAFALNPFMAVVIAYHETFFQVMEYVEEIKDPKRGSIEEAFVYASQNIGVWMDTVGAYQWI 300          
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Match: A0A0P1AIT8_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AIT8_PLAHL)

HSP 1 Score: 145 bits (367), Expect = 1.120e-37
Identity = 102/278 (36.69%), Postives = 148/278 (53.24%), Query Frame = 1
Query:   91 RKADLKRKLEVSRLKRAAAKQEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPII-----------GAEPENPHWQEQGEDLF--ALKGEAFSSHPACRTYLDLKCQLGGACLAAGKSKDAIQHFERCLVLDPSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEAALWQDLEGAAEWI 885
            +K   +R++ V +L+R   ++ + LR +  PK  TP  P +  R+          SKW+L+GAARPA ++           G E   P    +  DL+  AL+    + H     Y+ L  QL  AC  AG     I+ +E C+ LD +D +R+  GLV  L+D      ARALIE+  D +  AVL++  V IEY+SW +L E+GS EA    AL  AY  NPF+A  +A+ D F  V+EYVD+I++P   ++EEAF+Y      +W D  GA  WI
Sbjct:    7 KKQQNRRRMRVVQLQRLVDRKLQDLRAF--PK--TPPSPTASARK-----GPTSPSKWKLKGAARPAALLARIAAGELDECGNEYPKP---VETFDLYEKALRDGDLAQHKDIVEYISLLKQLAVACCEAGMPDRGIKSYELCMTLDKNDTIRSCEGLVCVLIDEGRGVDARALIEKHMD-EKSAVLAYCEVIIEYVSWEVLEEEGSSEAAVQKALRKAYELNPFIAVVIAYHDTFLQVVEYVDEIKNPKRGSIEEAFRYVLKNIGVWVDTVGACHWI 271          
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Match: A0A3R7W379_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3R7W379_9STRA)

HSP 1 Score: 142 bits (358), Expect = 6.920e-36
Identity = 88/222 (39.64%), Postives = 122/222 (54.95%), Query Frame = 1
Query:  256 SKWQLRGAARPAPIIGAEPENPHWQEQGEDLFALKGEAF------------SSHPACRTYLDLKCQLGGACLAAGKSKDAIQHFERCLVLDPSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEAALWQDLEGAAEWI 885
            S+W+L GAARPA ++ A+       E G++ F    E F            + +   R Y+ L  +L  AC  A      I+++E C+ LD +D+  +R GL  AL+D      ARALIE+  D D  AVL++  V IEY+SW +L E GS E V  AA   A+  NPF+A  +A+ + F  V+EYVDDIRDP   ++EEAF Y S    +W D  GA +WI
Sbjct:   90 SEWKLTGAARPAALV-AKIAAGELDECGDE-FPKPVETFDLYEKMRQEGKLAENKDTREYISLLKRLAAACCEAAIPDRGIKNYELCMSLDTTDSFHSREGLACALVDEGRGAEARALIEQHTD-DESAVLAYCQVIIEYVSWEVLDESGSSEKVVQAAFRKAFRLNPFMAVVIAYHETFFQVMEYVDDIRDPKRGSIEEAFVYVSQNIGVWMDTVGAYQWI 308          
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Match: A0A7S2RPG7_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RPG7_9STRA)

HSP 1 Score: 109 bits (272), Expect = 2.380e-23
Identity = 81/245 (33.06%), Postives = 116/245 (47.35%), Query Frame = 1
Query:  247 LDTSKWQLRGAARPAPII-------------GAEPENPHWQEQGEDLFALKG---------EAFSSHPACRTYLDLKCQLGGACLAAGKSKDAIQHFERCLVLDPSD----AVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEA-ALWQDLEGAAEWIAGWLI 900
            L    W+LRGAARPA  +               E      Q     L   KG         E+ +    CR YL L  QLG   L A K K A + F RC+ L+ +D       AR  L+R  +D +  D AR L E    TD+   + +S   IE++SW++L E+GS++  A   L  A  +N F A+ +AF D F +V+EY D++ D    ++E+A +YC+ E    W   E A +WI   L+
Sbjct:  127 LGPETWKLRGAARPAYEVYDFDTRYVDVHLKAHEEAKIKGQRIRNILSVYKGHFCQKAQEKESENLKRVCRLYLSLLMQLGLLNLEAKKFKTARETFMRCIELEGTDHDVPVTNARSQLMRMYLDNNRPDSARRLWEEL-PTDSSVWVRYSAALIEFVSWKILEEEGSNKETAEINLAKAIRSNLFCAYYIAFHDTFKEVMEYTDEVEDAENGSIEQAIEYCNSEQMGSWLGTEDAIQWIRSVLL 370          
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Match: A0A7S2E5K4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2E5K4_9STRA)

HSP 1 Score: 108 bits (271), Expect = 6.610e-23
Identity = 78/244 (31.97%), Postives = 115/244 (47.13%), Query Frame = 1
Query:  247 LDTSKWQLRGAARPA------------PIIGAEPENPHWQEQGEDLFAL-KGE---------------AFSSHPACRTYLDLKCQLGGACLAAGKSKDAIQHFERCLVLD--PSDAVRARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEA-ALWQDLEGAAEWI 885
            L    W+LRGAARPA            P + A  +     ++  ++  + KG+                    P CR +L L  QLG   + A K K A + F  C+ LD   S    AR  L+R  ++ +    AR L ER   TD  + + +S   IEY+SW+LL EDGS +  A   L  A  AN + A+ +A+ D F  V+EY +++ D    T+EEA +YC+ E    W   +GA +W+
Sbjct:  143 LGPETWKLRGAARPAWEVYDFDTRYVDPHLEAHQKAKEKAQRIRNILTIFKGQFGRMESKEEEDGETKPLPPQPHCRRFLSLLMQLGLLNMEAKKYKAAREVFLECIDLDGITSPVTNARCRLMRMYLEANRPASARRLWERLPQTDNSSWIRYSAALIEYVSWKLLEEDGSSQQTAELYLVRAIKANIYCAYHIAYHDTFESVVEYAEEVEDAEERTLEEAIEYCASEQMGTWVGTDGAIDWM 386          
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Match: A0A2P4Y4B9_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y4B9_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 9.480e-21
Identity = 60/139 (43.17%), Postives = 83/139 (59.71%), Query Frame = 1
Query:  511 ARRGLVRALMDRSLADRARALIERFRDTDTGAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAA---NPFVAWQLAFADEFADVLEYVDDIRDPAPSTVEEAFQYCSWEAALWQDLEGAAEWIAGWLIARAAPA 918
            +R GL  AL+D      ARALIE  +D ++ AVL++  V IEY+SW +L E+GS E V   A   A+ A   NPF+A  +A+ + F  V+EYVD+I++P   ++EEAF Y S    +W D  GA +WI   L   A PA
Sbjct:    1 SREGLACALVDEGRGAEARALIEEHKDEES-AVLAFCQVIIEYVSWEVLEEEGSSEEVVQKAFRKAFVAFVLNPFMAVVIAYHETFFQVMEYVDEIKNPKRGSIEEAFVYVSQNIGVWVDTVGAYQWIEKELNELAEPA 138          
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Match: D7FPV9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPV9_ECTSI)

HSP 1 Score: 92.4 bits (228), Expect = 2.740e-17
Identity = 61/127 (48.03%), Postives = 83/127 (65.35%), Query Frame = 1
Query:    1 KKQLKKAEKRGREDRA---KP-RLETFAGHDKAPRKADLKRKLEVSRLKRAAAKQEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPII----GAE--PENPHWQEQGEDLF 351
            K++ ++AEKR ++ R    KP  ++   G++  P+K   KR+LE++RL+R  +KQEELLR+Y PP    P  PE +R+RRR+DFYDLDTS W+L GAARPA  +    G E   E   W E GEDLF
Sbjct:    9 KREAERAEKRAKKRRKLGKKPLTVDRSGGYESQPKKHANKRRLELARLERLVSKQEELLRDYRPPVHVAPLDPELKRKRRRRDFYDLDTSHWKLTGAARPADSLPGAGGTELVNEREDW-EAGEDLF 134          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|150685 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A835Z3Z8_9STRA3.680e-219100.00Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A5D6XJ64_9STRA4.220e-4637.46Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3W4X0_GLOUD1.400e-4136.53Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
G5A291_PHYSP1.990e-3835.51Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A0P1AIT8_PLAHL1.120e-3736.69Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
A0A3R7W379_9STRA6.920e-3639.64Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
A0A7S2RPG7_9STRA2.380e-2333.06Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A7S2E5K4_9STRA6.610e-2331.97Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A2P4Y4B9_9STRA9.480e-2143.17Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
D7FPV9_ECTSI2.740e-1748.03Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_209contigContig_209:39845..40771 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|150685|gw1.209.32.1
Max annot lvl2759|Eukaryota
EggNOG OGs2C0FH@1|root,2QU7Q@2759|Eukaryota
Evalue2.33e-68
Seed ortholog2880.D7FPV9
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_008510.1
TranscriptId151007
TrackFilteredModels1
ProteinId150685
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|150685gene_17096Tribonema minus UTEX_B_3156 geneContig_209 39845..40771 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_17096_1exon_17096_1Tribonema minus UTEX_B_3156 exonContig_209 39845..40771 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_17096CDS_17096Tribonema minus UTEX_B_3156 CDSContig_209 39845..40771 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|150685Trimin1|150685|gw1.209.32.1Tribonema minus UTEX_B_3156 polypeptideContig_209 39845..40771 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_17096 ID=mRNA_17096|Name=jgi.p|Trimin1|150685|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=927bp|location=Sequence derived from alignment at Contig_209:39845..40771- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
AAGAAGCAGCTCAAGAAGGCTGAAAAGCGCGGCCGTGAGGACAGGGCCAA
ACCTCGCTTGGAGACCTTCGCCGGGCACGATAAAGCACCTCGTAAAGCCG
ACCTCAAGCGCAAGCTAGAAGTTAGCAGGCTGAAAAGAGCAGCGGCTAAG
CAAGAGGAGCTGCTGCGAAATTACATACCGCCTAAAGTGACCACTCCCGA
GTGCCCCGAATCCAGGCGCCGGCGGCGAAGGCAAGACTTCTACGACCTGG
ACACCAGCAAGTGGCAGCTGAGAGGGGCTGCGAGACCAGCACCGATCATA
GGAGCAGAGCCAGAAAATCCACACTGGCAAGAGCAGGGCGAAGACCTCTT
TGCACTGAAAGGGGAGGCCTTCTCATCCCACCCCGCCTGCAGAACGTACC
TCGACCTCAAGTGCCAACTGGGCGGCGCCTGCCTAGCAGCGGGCAAGTCC
AAGGATGCCATCCAACACTTCGAACGCTGCCTGGTGCTCGACCCCAGCGA
CGCCGTCAGAGCGCGACGCGGCCTCGTTCGCGCCCTCATGGACAGGAGCC
TCGCAGACCGCGCCCGCGCGCTAATAGAGCGCTTCCGGGACACGGACACC
GGCGCCGTCCTGTCGTGGTCCCTCGTGGCCATCGAGTACATCTCGTGGCG
GCTGCTGGGCGAGGACGGCAGCGACGAGGCGGTCGCGGCGGCGGCGCTCG
AGGCGGCGTACGCCGCGAACCCGTTCGTCGCGTGGCAGCTCGCCTTCGCA
GACGAGTTCGCGGACGTCCTCGAGTACGTCGACGACATCCGGGACCCCGC
GCCGTCCACCGTTGAGGAGGCCTTCCAGTACTGCAGCTGGGAGGCCGCGC
TCTGGCAGGACCTGGAGGGCGCGGCGGAGTGGATAGCGGGCTGGCTGATT
GCACGCGCGGCGCCGGCGCCGCAGCCC
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protein sequence of jgi.p|Trimin1|150685

>Trimin1|150685|gw1.209.32.1 ID=Trimin1|150685|gw1.209.32.1|Name=jgi.p|Trimin1|150685|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=309bp
KKQLKKAEKRGREDRAKPRLETFAGHDKAPRKADLKRKLEVSRLKRAAAK
QEELLRNYIPPKVTTPECPESRRRRRRQDFYDLDTSKWQLRGAARPAPII
GAEPENPHWQEQGEDLFALKGEAFSSHPACRTYLDLKCQLGGACLAAGKS
KDAIQHFERCLVLDPSDAVRARRGLVRALMDRSLADRARALIERFRDTDT
GAVLSWSLVAIEYISWRLLGEDGSDEAVAAAALEAAYAANPFVAWQLAFA
DEFADVLEYVDDIRDPAPSTVEEAFQYCSWEAALWQDLEGAAEWIAGWLI
ARAAPAPQP
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mRNA from alignment at Contig_209:39845..40771-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_17096 ID=mRNA_17096|Name=jgi.p|Trimin1|150685|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=927bp|location=Sequence derived from alignment at Contig_209:39845..40771- (Tribonema minus UTEX_B_3156 )
AAGAAGCAGCTCAAGAAGGCTGAAAAGCGCGGCCGTGAGGACAGGGCCAA ACCTCGCTTGGAGACCTTCGCCGGGCACGATAAAGCACCTCGTAAAGCCG ACCTCAAGCGCAAGCTAGAAGTTAGCAGGCTGAAAAGAGCAGCGGCTAAG CAAGAGGAGCTGCTGCGAAATTACATACCGCCTAAAGTGACCACTCCCGA GTGCCCCGAATCCAGGCGCCGGCGGCGAAGGCAAGACTTCTACGACCTGG ACACCAGCAAGTGGCAGCTGAGAGGGGCTGCGAGACCAGCACCGATCATA GGAGCAGAGCCAGAAAATCCACACTGGCAAGAGCAGGGCGAAGACCTCTT TGCACTGAAAGGGGAGGCCTTCTCATCCCACCCCGCCTGCAGAACGTACC TCGACCTCAAGTGCCAACTGGGCGGCGCCTGCCTAGCAGCGGGCAAGTCC AAGGATGCCATCCAACACTTCGAACGCTGCCTGGTGCTCGACCCCAGCGA CGCCGTCAGAGCGCGACGCGGCCTCGTTCGCGCCCTCATGGACAGGAGCC TCGCAGACCGCGCCCGCGCGCTAATAGAGCGCTTCCGGGACACGGACACC GGCGCCGTCCTGTCGTGGTCCCTCGTGGCCATCGAGTACATCTCGTGGCG GCTGCTGGGCGAGGACGGCAGCGACGAGGCGGTCGCGGCGGCGGCGCTCG AGGCGGCGTACGCCGCGAACCCGTTCGTCGCGTGGCAGCTCGCCTTCGCA GACGAGTTCGCGGACGTCCTCGAGTACGTCGACGACATCCGGGACCCCGC GCCGTCCACCGTTGAGGAGGCCTTCCAGTACTGCAGCTGGGAGGCCGCGC TCTGGCAGGACCTGGAGGGCGCGGCGGAGTGGATAGCGGGCTGGCTGATT GCACGCGCGGCGCCGGCGCCGCAGCCC
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Coding sequence (CDS) from alignment at Contig_209:39845..40771-

>mRNA_17096 ID=mRNA_17096|Name=jgi.p|Trimin1|150685|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=927bp|location=Sequence derived from alignment at Contig_209:39845..40771- (Tribonema minus UTEX_B_3156 )
AAGAAGCAGCTCAAGAAGGCTGAAAAGCGCGGCCGTGAGGACAGGGCCAA
ACCTCGCTTGGAGACCTTCGCCGGGCACGATAAAGCACCTCGTAAAGCCG
ACCTCAAGCGCAAGCTAGAAGTTAGCAGGCTGAAAAGAGCAGCGGCTAAG
CAAGAGGAGCTGCTGCGAAATTACATACCGCCTAAAGTGACCACTCCCGA
GTGCCCCGAATCCAGGCGCCGGCGGCGAAGGCAAGACTTCTACGACCTGG
ACACCAGCAAGTGGCAGCTGAGAGGGGCTGCGAGACCAGCACCGATCATA
GGAGCAGAGCCAGAAAATCCACACTGGCAAGAGCAGGGCGAAGACCTCTT
TGCACTGAAAGGGGAGGCCTTCTCATCCCACCCCGCCTGCAGAACGTACC
TCGACCTCAAGTGCCAACTGGGCGGCGCCTGCCTAGCAGCGGGCAAGTCC
AAGGATGCCATCCAACACTTCGAACGCTGCCTGGTGCTCGACCCCAGCGA
CGCCGTCAGAGCGCGACGCGGCCTCGTTCGCGCCCTCATGGACAGGAGCC
TCGCAGACCGCGCCCGCGCGCTAATAGAGCGCTTCCGGGACACGGACACC
GGCGCCGTCCTGTCGTGGTCCCTCGTGGCCATCGAGTACATCTCGTGGCG
GCTGCTGGGCGAGGACGGCAGCGACGAGGCGGTCGCGGCGGCGGCGCTCG
AGGCGGCGTACGCCGCGAACCCGTTCGTCGCGTGGCAGCTCGCCTTCGCA
GACGAGTTCGCGGACGTCCTCGAGTACGTCGACGACATCCGGGACCCCGC
GCCGTCCACCGTTGAGGAGGCCTTCCAGTACTGCAGCTGGGAGGCCGCGC
TCTGGCAGGACCTGGAGGGCGCGGCGGAGTGGATAGCGGGCTGGCTGATT
GCACGCGCGGCGCCGGCGCCGCAGCCC
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