mRNA_17052 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|178095
Unique NamemRNA_17052
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|178095 vs. uniprot
Match: A0A835Z9Q3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Q3_9STRA)

HSP 1 Score: 458 bits (1178), Expect = 3.480e-163
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1
Query:    1 MYSTTIVYCPEQKLVYVDNVKAGSSTISAILYRHFNCVSRNHHTWAAEHIRQEKCEGLSAEACDGMRAKTDWLTKDELTGTTFFSAVREPLERFISGYKQAVAATVEIADWDISEYIQHYNTSEINQHTQTQVRRLSGRDASGKQVPMHFIASLETLGHDLSLLLAQLGLPPVDEFPKLRVAAQDPSKAALDTTLTTEQIRQLCQHLMQDYVCFGYPLPMECR 669
            MYSTTIVYCPEQKLVYVDNVKAGSSTISAILYRHFNCVSRNHHTWAAEHIRQEKCEGLSAEACDGMRAKTDWLTKDELTGTTFFSAVREPLERFISGYKQAVAATVEIADWDISEYIQHYNTSEINQHTQTQVRRLSGRDASGKQVPMHFIASLETLGHDLSLLLAQLGLPPVDEFPKLRVAAQDPSKAALDTTLTTEQIRQLCQHLMQDYVCFGYPLPMECR
Sbjct:    1 MYSTTIVYCPEQKLVYVDNVKAGSSTISAILYRHFNCVSRNHHTWAAEHIRQEKCEGLSAEACDGMRAKTDWLTKDELTGTTFFSAVREPLERFISGYKQAVAATVEIADWDISEYIQHYNTSEINQHTQTQVRRLSGRDASGKQVPMHFIASLETLGHDLSLLLAQLGLPPVDEFPKLRVAAQDPSKAALDTTLTTEQIRQLCQHLMQDYVCFGYPLPMECR 223          
BLAST of jgi.p|Trimin1|178095 vs. uniprot
Match: A0A835ZDX2_9STRA (Protein kinase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDX2_9STRA)

HSP 1 Score: 269 bits (687), Expect = 2.150e-80
Identity = 129/225 (57.33%), Postives = 160/225 (71.11%), Query Frame = 1
Query:    1 MYSTTIVYCPEQKLVYVDNVKAGSSTISAILYRHFNCVSRNHHTWAAEHIRQEKC--EGLSAEACDGMRAKTDWLTKDELTGTTFFSAVREPLERFISGYKQAVAATVEIADWDISEYIQHYNTSEINQHTQTQVRRLSGRDASGKQVPMHFIASLETLGHDLSLLLAQLGLPPVDEFPKLRVAAQDPSKAALDTTLTTEQIRQLCQHLMQDYVCFGYPLPMECR 669
            M +T I+YC EQ L YV N KAGSST +++L  HF+C S  H  W  EHI+Q +C   GLS+E C+  RA+TDWL    ++G  FFS VREP+ RF SGY+QAV +T E+  W ISEY+  Y    +N+HT TQ R LSGRDA G+QVPMHFIASLE L HDL+LL  +LGLPP+  +P  R    DP+KA LDTTLT +Q+R+LC HLMQD+VCFGY LP EC+
Sbjct:  823 MEATYIIYCREQMLTYVLNQKAGSSTTASVLNEHFHCTSTQH-DWVPEHIKQRRCYDSGLSSEDCERRRARTDWLDDGSISGMNFFSVVREPIARFKSGYQQAVTSTPELQGWTISEYLAEYRKFPVNEHTHTQARNLSGRDALGRQVPMHFIASLENLEHDLTLLWDELGLPPMAHYPHARSKEDDPNKAVLDTTLTADQMRELCDHLMQDFVCFGYTLPEECQ 1046          
BLAST of jgi.p|Trimin1|178095 vs. uniprot
Match: A0A836CHK8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHK8_9STRA)

HSP 1 Score: 247 bits (631), Expect = 3.100e-77
Identity = 121/222 (54.50%), Postives = 153/222 (68.92%), Query Frame = 1
Query:   10 TTIVYCPEQKLVYVDNVKAGSSTISAILYRHFNCVSRNHHTW--AAEHIRQEKCEGLSAEACDGMRAKTDWLTKDELTGTTFFSAVREPLERFISGYKQAVAATVEIADWDISEYIQHYNTSEINQHTQTQVRRLSGRDASGKQVPMHFIASLETLGHDLSLLLAQLGLPPVDEFPKLRVAAQDPSKAALDTTLTTEQIRQLCQHLMQDYVCFGYPLPMECR 669
            T +V+CP+  LVYVDNVKAGS+T+  IL R +NC    H  W  A   + + +C+GLS + C   R++TDWL    L+G TFFS VREP+ RF SGYKQAV    ++A+  I+EY++ Y    +N+HT TQ RRLSG DA  +QVPMHFIASLE L HD++ L A+LGL P+  FP++R A  D SKAALDT LT  Q+R LC HL QD+VCFGY LP  CR
Sbjct:   83 TDVVWCPKLNLVYVDNVKAGSTTMMGILSREYNCTWHTHTRWPPAQARLARAQCKGLSHDECQDRRSRTDWLDDAVLSGATFFSIVREPIARFQSGYKQAVTMDAKLANLTIAEYVEEYKLKYLNEHTLTQSRRLSGWDAHNRQVPMHFIASLENLEHDMAALWARLGLAPLAAFPRMRAAEMDASKAALDTRLTPVQVRVLCAHLAQDFVCFGYALPEACR 304          
BLAST of jgi.p|Trimin1|178095 vs. uniprot
Match: A0A835YYH3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYH3_9STRA)

HSP 1 Score: 237 bits (605), Expect = 9.480e-76
Identity = 117/228 (51.32%), Postives = 151/228 (66.23%), Query Frame = 1
Query:    4 YSTTIVYCPEQKLVYVDNVKAGSSTISAILYRHFNCVSRNHHTWAAEHIRQEKCEGLSAEACDGMRAKTDWLTKDELTGTT---FFSAVREPLERFISGYKQAVAATVEIADWDISEYIQHYNTSEINQHTQTQVRRLSGRDASGKQVPMHFIASLETLGHDLSLLLAQLGLPPVDEFPKLRVAAQDP---SKAALDTTLTTEQIRQLCQHLMQDYVCFGYPLPMECR 669
            + T +V C +  LVY+DNVKAGS+ + A+L   F C    H+ WA   + + KC GL    C   RA T W   + +TG     FFS VREP++RF+SG+KQA+     + +  IS +I+ Y  + +N+HTQTQ RRLSGRD +G QVPMHFIAS+E L HD++ L A  GLPPVDEFP++R AA+DP   S+A L T LTT  +R LC HLMQD+VCFGY LP ECR
Sbjct:   13 FGTDMVVCKKAGLVYIDNVKAGSTAVQAVLGTRFGCTWTRHNNWAPPELSRAKCWGLKPRKC---RATTQWFEDETVTGDPGMLFFSVVREPIDRFVSGFKQALLQDKALRNETISSFIRSYQYASMNEHTQTQARRLSGRDKAGNQVPMHFIASMENLEHDVAALFAHRGLPPVDEFPRMRAAARDPFKASRAELGTALTTADVRLLCAHLMQDFVCFGYLLPQECR 237          
BLAST of jgi.p|Trimin1|178095 vs. uniprot
Match: A0A836CGN9_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGN9_9STRA)

HSP 1 Score: 216 bits (549), Expect = 6.910e-61
Identity = 102/204 (50.00%), Postives = 136/204 (66.67%), Query Frame = 1
Query:   64 AGSSTISAILYRHFNCVSRNHHTWAAEHIR--QEKCEGLSAEACDGMRAKTDWLTKDELTGTTFFSAVREPLERFISGYKQAVAATVEIADWDISEYIQHYNTSEINQHTQTQVRRLSGRDASGKQVPMHFIASLETLGHDLSLLLAQLGLPPVDEFPKLRVAAQDPSKAALDTTLTTEQIRQLCQHLMQDYVCFGYPLPMECR 669
            AGS+TI  IL R +NC    H  W  E  R  +++C G   E C   R++TDWL    L    FFS VREP+ RF+SGYKQAVAA  ++ +W +++Y++ Y    +N+HT TQ RR+   DA G+Q+PMHFIASLE L  DL+LL A LG+PP++ F ++R A  D  K  L+T LT +Q+R+LC HL QD++CFGYPLP ECR
Sbjct: 1289 AGSTTIMGILERDYNCTWHTHMEWPEEQARIARQRCVGAMPEECFQKRSRTDWLDDSVLERAVFFSVVREPVSRFVSGYKQAVAAYEDVGNWTMTQYMEAYRVRSVNEHTLTQTRRIGVDDAHGRQIPMHFIASLENLEEDLALLWAHLGVPPIENFLRMRSAQTDSRKYHLETRLTADQLRELCWHLGQDFLCFGYPLPSECR 1492          
BLAST of jgi.p|Trimin1|178095 vs. uniprot
Match: A0A835YMP6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP6_9STRA)

HSP 1 Score: 194 bits (493), Expect = 1.130e-56
Identity = 103/222 (46.40%), Postives = 136/222 (61.26%), Query Frame = 1
Query:    4 YSTTIVYCPEQKLVYVDNVKAGSSTISAILYRHFNCVSRNHHTWAAEHIRQEKCEGLSAEACDGMRAKTDWLTKDELTGTTFFSAVREPLERFISGYKQAVAAT-VEIADWDISEYIQHYNTSEINQHTQTQVRRLSGRDASGKQVPMHFIASLETLGHDLSLLLAQLGLPPVDEFPKLRVAAQDPSKAALDTTLTTEQIRQLCQHLMQDYVCFGYPLPMEC 666
            Y T ++YCP+  LVYV NVKAGSSTI+A+L  +F C S                 GL+   C  +RA+T WL  D ++G  FFS VREP+ RF SGY QAV+     +    + EY++ +              RLSG DA+G+QVPMHF+ASL  L  DL  L + LGLPP+ +FP  R AA DP+KAALDT+L+  +++ +C HLMQD++CFGY LP EC
Sbjct:  220 YPTYVIYCPQVNLVYVGNVKAGSSTINAVLSSNFKCTS-----------------GLTEAECRKIRARTTWLDNDLISGMLFFSVVREPIARFKSGYMQAVSVPDTPLWGTPLKEYLELF--------------RLSGSDANGRQVPMHFVASLGNLEADLQTLWSTLGLPPLRDFPHEREAAHDPNKAALDTSLSRAELQDVCAHLMQDFICFGYRLPPEC 410          
BLAST of jgi.p|Trimin1|178095 vs. uniprot
Match: A0A835ZE79_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZE79_9STRA)

HSP 1 Score: 112 bits (280), Expect = 4.770e-25
Identity = 72/231 (31.17%), Postives = 98/231 (42.42%), Query Frame = 1
Query:  154 QEKCEGLSAEACDGMRAKTDWLTKDELTGTTFFSAVREPLERFISGYKQAVAATVE-IADWDISEYIQHYN-----------------------------------------------------------TSEINQHTQTQVRRLSGRDASGKQVPMHFIASLETLGHDLSLLLAQLGLPPVDEFPKLRVAAQDPSKAALDTTLTTEQIRQLCQHLMQDYVCFGYPLPMEC 666
            Q    GL+   C  +RA+TDWL  D ++G  FFS VREP+ RF SGY +AV+A    ++   + EY++HY                                                               IN+HT TQ R LSGRDA+ KQ                             ++   R AA+DP K  LDT++T  +++++C HLMQD+VCFGYPLP EC
Sbjct:    2 QANLVGLTEAECRKIRARTDWLDDDLMSGMLFFSVVREPIARFKSGYLEAVSAPDNRLSGMPLKEYLEHYRCRRCDICRRLLLFYHAPQAAAVAPYAASLLLRHASPDAAAAPPALPLPPRLPQRLRRWPVGAINEHTHTQARSLSGRDANNKQ-----------------------------DYTHAREAARDPIKTTLDTSMTPAELQEVCAHLMQDFVCFGYPLPPEC 203          
BLAST of jgi.p|Trimin1|178095 vs. uniprot
Match: A0A7S3T7K1_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3T7K1_EMIHU)

HSP 1 Score: 53.9 bits (128), Expect = 6.530e-5
Identity = 51/184 (27.72%), Postives = 73/184 (39.67%), Query Frame = 1
Query:    1 MYSTTIVYCPEQKLVYVDNVKAGSSTISAILYRH--------FNCVSRNHHTWAAEHIRQEKCEGLSAEACDGMRAKTDWLTKDELTGTTFFSAVREPLERFISGYKQAVAATVEIADWDISEYIQHYNTSE--INQHTQTQVRRLSGRDASGKQVPMHFIASLETLGHDLSLLLAQLGLPPVD 522
            M+S  ++   +   VY+DNVKAGSSTI   +  +         N V                C       C   R  T  L   +      FS VR+PL +F SG +Q  A+            ++    SE  +N+H Q    RL G DA G  VP+  +  LE    D   ++ +L  P +D
Sbjct:   67 MHSVDVLLVEKAGFVYLDNVKAGSSTIRRTVGDNRLWCQGGVVNGVGCTERFGGGGLTAPRTCCATGDRGCS--RLTTACLRSADARRLLVFSFVRDPLAKFESGLRQMFASYPAWEKLGADAILRRQLLSERWLNEHLQPSWWRLCGADADGNFVPLDRVGRLEEFEEDWKSIIERL--PHID 246          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|178095 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A835Z9Q3_9STRA3.480e-163100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZDX2_9STRA2.150e-8057.33Protein kinase domain-containing protein n=1 Tax=T... [more]
A0A836CHK8_9STRA3.100e-7754.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YYH3_9STRA9.480e-7651.32Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CGN9_9STRA6.910e-6150.00Reverse transcriptase domain-containing protein n=... [more]
A0A835YMP6_9STRA1.130e-5646.40Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZE79_9STRA4.770e-2531.17Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3T7K1_EMIHU6.530e-527.72Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_165contigContig_165:268103..270610 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|178095|e_gw1.165.22.1
Hectar predicted targeting categoryother localisation
TranscriptId178417
TrackFilteredModels1
ProteinId178095
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178095gene_17052Tribonema minus UTEX_B_3156 geneContig_165 268103..270610 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178095Trimin1|178095|e_gw1.165.22.1Tribonema minus UTEX_B_3156 polypeptideContig_165 268103..270610 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_17052_4exon_17052_4Tribonema minus UTEX_B_3156 exonContig_165 268103..268339 -
exon_17052_3exon_17052_3Tribonema minus UTEX_B_3156 exonContig_165 268794..268866 -
exon_17052_2exon_17052_2Tribonema minus UTEX_B_3156 exonContig_165 269342..269640 -
exon_17052_1exon_17052_1Tribonema minus UTEX_B_3156 exonContig_165 270548..270610 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_17052CDS_17052Tribonema minus UTEX_B_3156 CDSContig_165 270548..270610 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_17052 ID=mRNA_17052|Name=jgi.p|Trimin1|178095|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=672bp|location=Sequence derived from alignment at Contig_165:268103..270610- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGTATTCCACCACCATCGTGTACTGTCCAGAGCAAAAGCTGGTGTACGT
CGACAATGTGAAGGCAGGAAGCAGCACGATTTCCGCCATACTCTACAGAC
ACTTCAACTGCGTGTCGCGGAACCACCACACATGGGCTGCTGAGCACATC
AGGCAGGAAAAGTGCGAAGGGCTGAGTGCGGAGGCCTGTGATGGCATGCG
CGCAAAGACAGACTGGCTGACAAAGGATGAACTAACTGGGACCACCTTTT
TTTCTGCCGTGAGGGAGCCCCTGGAGCGCTTCATATCGGGATACAAGCAG
GCGGTAGCCGCTACAGTGGAGATTGCGGACTGGGACATCTCTGAGTACAT
TCAGCACTACAACACCTCGGAAATCAACCAGCACACGCAGACACAGGTCC
GCCGTCTTAGCGGGAGGGATGCATCTGGCAAGCAGGTGCCCATGCACTTC
ATTGCGTCACTGGAGACGTTGGGACATGATCTCAGCCTGCTACTGGCACA
ACTGGGACTGCCACCAGTTGATGAGTTTCCAAAGTTGCGAGTAGCAGCCC
AGGATCCCTCCAAAGCGGCATTGGACACAACGCTGACCACTGAGCAGATA
CGTCAGCTCTGCCAACACCTGATGCAGGATTATGTATGTTTTGGCTATCC
TCTGCCAATGGAGTGTCGATAG
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protein sequence of jgi.p|Trimin1|178095

>Trimin1|178095|e_gw1.165.22.1 ID=Trimin1|178095|e_gw1.165.22.1|Name=jgi.p|Trimin1|178095|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=224bp
MYSTTIVYCPEQKLVYVDNVKAGSSTISAILYRHFNCVSRNHHTWAAEHI
RQEKCEGLSAEACDGMRAKTDWLTKDELTGTTFFSAVREPLERFISGYKQ
AVAATVEIADWDISEYIQHYNTSEINQHTQTQVRRLSGRDASGKQVPMHF
IASLETLGHDLSLLLAQLGLPPVDEFPKLRVAAQDPSKAALDTTLTTEQI
RQLCQHLMQDYVCFGYPLPMECR*
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mRNA from alignment at Contig_165:268103..270610-

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_17052 ID=mRNA_17052|Name=jgi.p|Trimin1|178095|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2508bp|location=Sequence derived from alignment at Contig_165:268103..270610- (Tribonema minus UTEX_B_3156 )
ATGTATTCCACCACCATCGTGTACTGTCCAGAGCAAAAGCTGGTGTACGT CGACAATGTGAAGGTTAGCCCACTTTCCTCCACGACGACTGCAGTACCTA CTCTTCTTGTGACTCGCAGATTACTAGTGTGCCTTCACAGTTGTTGGGCA TGACAGAGCGTAATGCTGGCACTCAATTCATCACTCTGTCCTTGTGTTGA GGCCAAGTCAGCATCAAAACCGCTGTGAAGTTGAGCTGAGCTGACTGGAT GGCACGTTTTGTGCAATAATTGTTGGATTAAGATCATATTTGTGTTGCGC ATGTACTGTAACATCACTTGGAGAAGCGCTGCTTGAGAGCCACCCAGCTG CAGCATTATCGTTTCCTTGTTGAGCAATAGATGACAATGCCCCTGGTTAG TAGCTGACTGAGGCCAGCCGCTGCTCTGTTGCCATCCGCATCTGATGCAC TCATGAAGACTACATGTTTCCAGACAGCCTGACAATCAGCCAGTAGTAAT CGCTGCTGAAAGCAGTCTCAATAAAGGTTGTTCGATATGGTACAGGTGCA TGAGGTTCGATGAAGACCAGTGCTAACCCAAAAGCACTGGCCAGCGTACC GGGCCACTGCCATTGCTGCACACAGGCCATTGCCGTTGCTGCACTGCGTG ACATGGACATTTTGCAATAATCATGATCCATTTCCAGCAGTAGCAGATAG TCATCAACGCATTTCAACACATTCTCAGTTCCTGTGACTATGGGTGCACA TGCCACCGCCAATTGGACAGCTGTCATCCATCGTTGTCAGCGTACACAAT CATCCACCATACTCTATTCCTCGGCTCTTATTTGCAAGTCCTCGAGAGGG TCCAGCCATTGCATAAATGCAGAGCATGCACCGTGCATACAGCCTTTGCC CTTTGCCTTTCCGGCCCCATAATGCTGCTCTCTCACCATCGCCTCTCTCC CTGCCGTCTGCTCTCGTCAGGCAGGAAGCAGCACGATTTCCGCCATACTC TACAGACACTTCAACTGCGTGTCGCGGAACCACCACACATGGGCTGCTGA GCACATCAGGCAGGAAAAGTGCGAAGGGCTGAGTGCGGAGGCCTGTGATG GCATGCGCGCAAAGACAGACTGGCTGACAAAGGATGAACTAACTGGGACC ACCTTTTTTTCTGCCGTGAGGGAGCCCCTGGAGCGCTTCATATCGGGATA CAAGCAGGCGGTAGCCGCTACAGTGGAGATTGCGGACTGGGACATCTCTG AGTACATTCAGCACTACAAGTGAGTGCGCTGAGCACATACTCGTGCGCTC ATGTAGGTCAGACCTGCTGTATGTGCTGCAAATGCTGTACTTTGTAGCGC TCAAGCGCGGCGTACCACTAGCTGCGCACTGGTTGTTTCATGCGCAGACA GGCAGCAGGATTGCAGAGCAGGTGCGCAAAATGGTTTTCCACAAGCATAA ACTACATGAGCGGAGTTCCGGTCACCATCAGGCTCCTCGAAGTGCAGCAA GGCTTGCATTCATGCATAACGTGTCTAGGACGTGATGTCAGAAGTCGAAG GAAGAGTGGTTAAACCTCTGCTTTTCTCAGCGGCGCACTTCAAATTTGTC AATTATATGTCGATATTCATGTGCAAACATGGTAGAGTTTGCTTTGCAGG CTCAACATCTGCCGCAGTCGGTATGTGCAGCTGGCACCAGTCTAAAGCCC CTGTGACGCTTTGTCAAATTTTCTCGCTTGCATCACTGCGCCAGCACCTC GGAAATCAACCAGCACACGCAGACACAGGTCCGCCGTCTTAGCGGGAGGG ATGCATCTGGCAAGCAGGTGAGGCGGCCAGCCACAGTGGTAGCTGCGTCC GTGGCCGTGATGAAAACGCGTATGGTGCAGTGTTGGGGGATGGTGTTCAC AGAGGTGACTAAATCATTCATAGTTGTGGCCGCAACAGTCATGTTTTGCT AGCATGCACATGTACAACGCTTCTAGTAGCAGTGCTTGCAGAAATCTGAA ACCTTTGAAACTGCATATGCAACCTGAAACCACTGTCGGCAGGCAGGCTG CTGTTACAGCTCTGGCAGTCATCGCGATGGCAATGTACAGAGATGCACAC TTGCAGCATCAGAACGGCCTGTGTGCCACAGAGCTGCATGCAGCCTCAAA ACGGCCTGTGCACCTCTGTGGCACCTATTGGTTGTGCATTCGCGCATGCT GTGGAATCAGGCAGTCACTGGTGAAGCTTTGCTCTGACTTCACATATTGC CGTGCTGCCCTCGATTTGCAGGTGCCCATGCACTTCATTGCGTCACTGGA GACGTTGGGACATGATCTCAGCCTGCTACTGGCACAACTGGGACTGCCAC CAGTTGATGAGTTTCCAAAGTTGCGAGTAGCAGCCCAGGATCCCTCCAAA GCGGCATTGGACACAACGCTGACCACTGAGCAGATACGTCAGCTCTGCCA ACACCTGATGCAGGATTATGTATGTTTTGGCTATCCTCTGCCAATGGAGT GTCGATAG
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Coding sequence (CDS) from alignment at Contig_165:268103..270610-

>mRNA_17052 ID=mRNA_17052|Name=jgi.p|Trimin1|178095|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=672bp|location=Sequence derived from alignment at Contig_165:268103..270610- (Tribonema minus UTEX_B_3156 )
ATGTATTCCACCACCATCGTGTACTGTCCAGAGCAAAAGCTGGTGTACGT
CGACAATGTGAAGGCAGGAAGCAGCACGATTTCCGCCATACTCTACAGAC
ACTTCAACTGCGTGTCGCGGAACCACCACACATGGGCTGCTGAGCACATC
AGGCAGGAAAAGTGCGAAGGGCTGAGTGCGGAGGCCTGTGATGGCATGCG
CGCAAAGACAGACTGGCTGACAAAGGATGAACTAACTGGGACCACCTTTT
TTTCTGCCGTGAGGGAGCCCCTGGAGCGCTTCATATCGGGATACAAGCAG
GCGGTAGCCGCTACAGTGGAGATTGCGGACTGGGACATCTCTGAGTACAT
TCAGCACTACAACACCTCGGAAATCAACCAGCACACGCAGACACAGGTCC
GCCGTCTTAGCGGGAGGGATGCATCTGGCAAGCAGGTGCCCATGCACTTC
ATTGCGTCACTGGAGACGTTGGGACATGATCTCAGCCTGCTACTGGCACA
ACTGGGACTGCCACCAGTTGATGAGTTTCCAAAGTTGCGAGTAGCAGCCC
AGGATCCCTCCAAAGCGGCATTGGACACAACGCTGACCACTGAGCAGATA
CGTCAGCTCTGCCAACACCTGATGCAGGATTATGTATGTTTTGGCTATCC
TCTGCCAATGGAGTGTCGATAG
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