mRNA_16996 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|353660 vs. uniprot
Match: A0A835ZEW0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEW0_9STRA) HSP 1 Score: 894 bits (2310), Expect = 0.000e+0 Identity = 482/482 (100.00%), Postives = 482/482 (100.00%), Query Frame = 1
Query: 1 MSRTPVKKVAVIGAGAAGLAAARRLRDAGHAVTVLERSGSVGGVWRHGAPDLPTPMYRGLVTNLPKQIMSFLDAPFPPAVASYLSHRDVLAYLTRYADAHGLRELVFTRALVTRVAPVWGGAQQGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWESGGEGGRQRQRQRFDFVAVCNGHYDVPSDGSGLGGGSLGTAFMGRVMYANEYDEAGGLEGQSVLCVGARASGTDIAREVAEVAAEVHVSDRSRKGGSTFRGGLHGNIARHPGVEKFTGDKGVLFTDGTTADVDTVVLCTGYEYNFPFLEQVKEELPLRWDNKAVSPLYKHLFHAYHPTLCFIGLPHSVVPFHLFELQAALFAAVCNGSAQLPDEAERLQCMQQEAQTRADMGLRPRDAHYMGDMQWGYIRDIAQMGGVMDAQLDKELALREKIYNDASAARPPQPGDPDVYRKREYVDLDVAAVAVVVKFVQVRVRAAAHD 1446
MSRTPVKKVAVIGAGAAGLAAARRLRDAGHAVTVLERSGSVGGVWRHGAPDLPTPMYRGLVTNLPKQIMSFLDAPFPPAVASYLSHRDVLAYLTRYADAHGLRELVFTRALVTRVAPVWGGAQQGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWESGGEGGRQRQRQRFDFVAVCNGHYDVPSDGSGLGGGSLGTAFMGRVMYANEYDEAGGLEGQSVLCVGARASGTDIAREVAEVAAEVHVSDRSRKGGSTFRGGLHGNIARHPGVEKFTGDKGVLFTDGTTADVDTVVLCTGYEYNFPFLEQVKEELPLRWDNKAVSPLYKHLFHAYHPTLCFIGLPHSVVPFHLFELQAALFAAVCNGSAQLPDEAERLQCMQQEAQTRADMGLRPRDAHYMGDMQWGYIRDIAQMGGVMDAQLDKELALREKIYNDASAARPPQPGDPDVYRKREYVDLDVAAVAVVVKFVQVRVRAAAHD
Sbjct: 1 MSRTPVKKVAVIGAGAAGLAAARRLRDAGHAVTVLERSGSVGGVWRHGAPDLPTPMYRGLVTNLPKQIMSFLDAPFPPAVASYLSHRDVLAYLTRYADAHGLRELVFTRALVTRVAPVWGGAQQGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWESGGEGGRQRQRQRFDFVAVCNGHYDVPSDGSGLGGGSLGTAFMGRVMYANEYDEAGGLEGQSVLCVGARASGTDIAREVAEVAAEVHVSDRSRKGGSTFRGGLHGNIARHPGVEKFTGDKGVLFTDGTTADVDTVVLCTGYEYNFPFLEQVKEELPLRWDNKAVSPLYKHLFHAYHPTLCFIGLPHSVVPFHLFELQAALFAAVCNGSAQLPDEAERLQCMQQEAQTRADMGLRPRDAHYMGDMQWGYIRDIAQMGGVMDAQLDKELALREKIYNDASAARPPQPGDPDVYRKREYVDLDVAAVAVVVKFVQVRVRAAAHD 482
BLAST of jgi.p|Trimin1|353660 vs. uniprot
Match: W7TNR6_9STRA (Flavin monooxygenase FMO n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TNR6_9STRA) HSP 1 Score: 269 bits (687), Expect = 1.990e-79 Identity = 197/498 (39.56%), Postives = 259/498 (52.01%), Query Frame = 1
Query: 19 KKVAVIGAGAAGLAAARRLRDAGHAVTVLERSGSVGGVWRHGAPDLPTPMYRGLVTNLPKQIMSFLDAPFPPAVASYLSHRDVLAYLTRYADAHGLRELVFTRALVTRVAPVWGG-AQQGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE---W------ESGG------EGGRQRQRQRFDFVAVCNGHYDVPSDGSGLGGGSLGTAFMGRVMYANEYDEAGGLEGQSVLCVGARASGTDIAREVAEVAAEVHVSDRS----RKGGSTFRGGLH-GNIARHPGVEKFT--GD-KGVLFTDGTTAD-VDTVVLCTGYEYNFPFLE--QVKEELPL------------RWDNKAVSPLYKHLFHAYHPTLCFIGLPHSVVPFHLFELQAALFAAVCN---GS----AQLPDEAERLQCMQQEAQTRADMG-LRPRDAHYMGDMQWGYIRDIAQMGGVMDAQLDKELALREKIYNDASAARPPQPGDPDVYRKREY 1371
+KVAV+GAGAAGL R +AG V + E++ +VGGVW++ D+ +YR LVTNLPK+IM+FLD PF P++ S+L H DV YL YA + + +L+ V V PV Q+G A E W ++GG EG + + FD V VCNGHY VP G L + GRVM++ +YD L G VLCVG RASGTDIAREVA+VA+EVHV DR + G G L GNI R PG+ F GD K +F DG+ +D V+ CTG++Y+ PFL E PL R +++AV PLY+HLFHA+ P+L FIGL HSVVPF LFELQA GS Q +++E + G + RD ++G QW Y R +A+ G + + L+++L +RE IYND S RP PG D YR+ EY
Sbjct: 67 QKVAVLGAGAAGLVTGRLFHEAGFRVRIFEKTSTVGGVWKYRPEDV---VYRSLVTNLPKEIMAFLDTPFDPSLPSFLRHTDVQTYLEGYAKQYDVEKLITFDTEVKEVRPVRRTRGQEGEGAAPYPPGDYTREHGLGAAREKGGPEGAGEEGEAPMWRVTVVRQAGGSVAGACEG--VPESEVFDAVVVCNGHYQVPHCPDLPG---LREHYRGRVMHSRDYDHPEALRGLKVLCVGYRASGTDIAREVAQVASEVHVVDRRLSKMTEDGKDEAGSLQRGNIYRRPGLRVFLPGGDGKSAMFEDGSVCTGIDLVLYCTGFQYHMPFLSGGSAFESRPLSPSALLSDARLLRVEDRAVFPLYQHLFHAFFPSLVFIGLLHSVVPFPLFELQALWALKTLRQPLGSDPXXXXXXXXXXXFQWLEEEKMRQEAAGRVLGRDWFFLGPGQWAYKRLLAREAGCLTSALEEDLQVREGIYNDVSNRRPVFPGGSDAYRRCEY 556
BLAST of jgi.p|Trimin1|353660 vs. uniprot
Match: A0A6H5JZC1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JZC1_9PHAE) HSP 1 Score: 267 bits (683), Expect = 7.000e-79 Identity = 210/560 (37.50%), Postives = 254/560 (45.36%), Query Frame = 1
Query: 13 PVKKVAVIGAGAAGLAAARRLRDAGHAVTVLERSGSVGGVWRHGA-PDLPTPMYRGLVTNLPKQIMSFLDAPFPPAVASYLSHRDVLAYLTRYADAHGLRELVFTRALVTRVA----PVWGGAQQ--GGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWESGGEG------GR---------------------QRQRQRFDFVAVCNGHYDVPSDGSGLGGGSLGTAFMGRVMYANEYDEAG--GLEGQSVLCVGARASGTDIAREVAEVAAEVHVSDRSRKGGSTFRGGLHGNIARHPGVEKFTGDKGVLFTDGTTADVDTVVLCTGYEYNFPFLEQVKEELPLRWDNKAVSPLYKHLFHAYHPTLCFIGLPHSVVPFHLFELQAALFAAVCNGSAQLPDEAERLQCMQQEAQTRADMGLRP--RDAHYMGDMQWGYIRDIAQM-----------------------------------------------------GGVMDAQLDKELALR-----EKIYNDASAARPPQPGDPDVYRKREY-VDLDVAAVAV 1401
P V VIGAGAAGLAA R LRD G VT+LE+S VGGVWR+ P+ PMYR LVTNLPK+ MS+ PFP S+ +H VL YL YAD H L L+ V V P G + G V + G GR Q + FD V VC+GH+D + G F G VM+A EYD G G+ VLCVGAR+SGTDIAREV+ VA VHV DRS T +GG GN+ +EKF G GV F +G +VDTVV CTGY Y FPFLE L +K V P+++HLFH YHP+L FIGLP S+V F LFELQA AA G A P AER Q ++ E + G+ P R AH +G QW Y+R + ++ G QL+ E L+ E IYNDA RP PG PD YR+R+Y VD D +V
Sbjct: 18 PPPSVCVIGAGAAGLAAGRCLRDEGCRVTILEKSHDVGGVWRYKPEPEARAPMYRSLVTNLPKETMSYFGFPFPEENQSFTTHAQVLDYLCSYADEHNLHPLISLGCSVESVRLASLPSAGDSSHAFGSVNGRLSSSEDSSEEAATGTVTATAADRYGGGIDQGQSSTGVESTTLGRWEVVYRRXXXXXXXXXXXXXXQIVAEVFDAVCVCSGHFDETYTPTVAGLDE----FQGTVMHAREYDIPGVEAFVGKRVLCVGARSSGTDIAREVSSVAHAVHVCDRSNP--VTSKGGERGNVWWRTALEKFEGANGVRFKNGELVEVDTVVWCTGYNYAFPFLEG--SGLLTAPASKRVHPVFEHLFHVYHPSLSFIGLPQSIVTFPLFELQANAVAAAIVGRAAFPSLAEREQWLRGEEDRLREGGVGPSSRGAHVLGGRQWEYLRRLLRIASGPGVLGRGSYAENHASQRDGRAAGGDEGSAIPKASGKEASQSRGAAAATEEGAQQRHQLELERLLKVLNVMEAIYNDAGDNRPGFPGGPDDYRRRQYRVDWDSGRFSV 569
BLAST of jgi.p|Trimin1|353660 vs. uniprot
Match: A0A8J5X5E0_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5X5E0_DIALT) HSP 1 Score: 242 bits (618), Expect = 6.770e-70 Identity = 181/502 (36.06%), Postives = 226/502 (45.02%), Query Frame = 1
Query: 1 MSRTPVKKVAVIGAGAAGLAAARRLRDAGHAVTVLERSGSVGGVWRHGAPDLPTPMYRGLVTNLPKQIMSFLDAPFPPAVASYLSHRDVLAYLTRYADAHGLRELVFTRALVTRVAPVWGGAQQGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWESGGEGGRQRQRQRFDFVAVCNGHYD---VPSDGSGLGGGSLGTAFMGRVMYANEYDEAGGLEGQSVLCVGARASGTDIAREVAEVAAEVHVSDRSRKGGSTFRGGLHGNIARHPGVEKF-------------------------------TGDKGVLFTDGTT------ADVDTVVLCTGYEYNFPFL--EQVKEELPLRWDNKAVSPLYKHLFHAYHPTLCFIGLPHSVVPFHLFELQAALFAAVCNGSAQLPDEAERLQCMQQEAQ---TRADMGLRPRDAHYMGDMQWGYIRDIAQMGGVMDAQLDKELALREKIYNDASAARPPQPGDPDVYRKREY 1371
+S ++V VIG+GAAGLAAARRL++AG TVLER G++GG+W G +Y GLVTNLPK++M+F D PF + S++ DV YL YA H L V R VT V P W + FD V V NGHY+ +P LGG G M+A Y G+ V+ VGARASGTDIAREVA VAA V V+D + G HG I R P + + +GD G L T D V+ CTGY Y FPFL E L V+PL LFHA P+L FIGLPHSVVPF L + QAAL A V A+ QQ A+ + A G R+ ++GD QW Y+R++A++GG D LD L L E +Y D +RP QPG D YR+ Y
Sbjct: 21 VSALAARRVCVIGSGAAGLAAARRLQEAGLEPTVLERGGALGGLWALGEAAAGGAVYPGLVTNLPKELMAFHDVPFDGDLPSFVRAADVARYLQAYARLHRLERAVRLRCTVTEVRPC------------------------APPSADCRLGVARWCVRWRDERGDEPVACEETFDAVVVANGHYEQAAIPP----LGGVRAFVRAGGTAMHARRYKRPEQFAGKRVVIVGARASGTDIAREVAAVAASVVVADPACAALERVGGAAHGTIWRAPALARLDVGEHGPCAVFQPRPAAVATAATAAAAQGATSGDGGRLQPGAQTELHARSVPCDAVIACTGYAYAFPFLGDEATAALGGLLAARGVVAPLRLRLFHAVAPSLAFIGLPHSVVPFPLMDAQAALVARVLAADARATGALAPAGSRQQHARELLSAARRGEGEREPLHLGDAQWEYVRELARLGGFYDRALDARLRLSEAMYKDVQRSRPAQPGADDAYRRARY 494
BLAST of jgi.p|Trimin1|353660 vs. uniprot
Match: B7FZD6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FZD6_PHATC) HSP 1 Score: 237 bits (604), Expect = 1.660e-68 Identity = 169/470 (35.96%), Postives = 240/470 (51.06%), Query Frame = 1
Query: 22 KVAVIGAGAAGLAAARRL-RDAGHAV--TVLERSGSVGGVWRHGAPDLPT-PMYRGLVTNLPKQIMSFLDAPFPPAV--ASYLSHRDVLAYLTRYADAHGLRELVFTRALVTRVAPVWGGAQQGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWESGGEGGRQRQRQRFDFVAVCNGHYDVPSDGSGLGGGSLGTAFMGRVMYANEYDEAGGLEGQSVLCVGARASGTDIAREVAEVAAEVHVSDRSRKGGSTFRGGLHGNIARHPGVEKFTGDKGVLF--TDGTTADVDTVVLCTGYEYNFPFLEQVKEELPL--RWDNKAVSPLYKHLFHAYHPTLCFIGLPHSVVPFHLFELQA-ALFAAVCNGSAQLPDEAERLQCMQQEA----QTRADMGLRPRDAHYMGDMQWGYIRDIAQMGGVMDAQLDKELALREKIYNDASAARPPQ-PGDPDVYRKREYVDLD 1383
K+A++G GAAGLAAAR + R +G V VLE+ ++GGVW + T PMYR L TNLPK+IM+F + P+P AS+++HR VL YL Y D L + R VT + + E + +G + + FD V VCNGHY VP+ + L G L F G+ ++A YD GQ+VLCVG RASG+DIARE++ V V +SD + + N+ P + D V F TD VDT++ CTGY+YNFPF+ + L + V PL++ L+HA +P LCF+GLPHSV+PF LFELQA A++++ N + LPD++ R Q ++ A + + D G P+D+HY+G QW Y R +A + D +++ L + IY+ R P PD YR Y L+
Sbjct: 7 KIAILGGGAAGLAAARVVHRQSGGKVRPVVLEQGDAMGGVWNYRDETAATKPMYRHLRTNLPKEIMAFRELPWPNLEPNASFVTHRQVLDYLHHYRDRFKLEPFIRYRTRVTHLRIL--------------SDRVGDTVEYISQSRLSTREEPLPRVELTTDTDG--KECSEAFDGVFVCNGHYGVPAIPA-LDG--LEQYFRGQTLHAMAYDNPDAFRGQTVLCVGGRASGSDIARELSGVCRHVFLSDSTAPDDAPI---TEFNVTWVPPTVRVREDGAVTFARTDFVAKKVDTIIFCTGYDYNFPFISESTSNLDFDATIGTRRVKPLFEQLWHATYPNLCFVGLPHSVIPFPLFELQAEAVWSSWTNSPSVLPDQSARQQHAEEAAVSGGEGKVDDGRVPQDSHYLGSAQWDYCRRLASYADIYDNRMEDFLVTNKTIYDHTWVQRKNVFPAGPDTYRDYCYQRLE 454
BLAST of jgi.p|Trimin1|353660 vs. uniprot
Match: A0A7S3L9I6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L9I6_9STRA) HSP 1 Score: 236 bits (603), Expect = 3.220e-68 Identity = 167/456 (36.62%), Postives = 225/456 (49.34%), Query Frame = 1
Query: 22 KVAVIGAGAAGLAAARRLRDAG-HAVTVLERSGSVGGVWRHGAPDLPTPMYRGLVTNLPKQIMSFLDAPFPPAV-ASYLSHRDVLAYLTRYADAHGLRELVFTRALVTRVAPVWGGAQQGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWESGGEGGRQRQRQRFDFVAVCNGHYDVPSDGSGLGGGSLGTAFMGRVMYANEYDEAGGLEGQSVLCVGARASGTDIAREVAEV-AAEVHVSDRSRKGGSTFRGGLHGNIARHPGVEKFTGDKGVLFTDGTTA--DVDTVVLCTGYEYNFPFLEQVKEELPLRWDNKAVSPLYKHLFHAYHPTLCFIGLPHSVVPFHLFELQAALFAAVCNGSAQLPDEAERLQCMQQEAQTRADMGLRPRDAHYMGDMQWGYIRDIAQMGGVMDAQLDKELALREKIYNDASAARPPQ-PGDPDVYRKREY 1371
K+AVIGAGAAGLA AR ++ AG V VLE+ S+GGVW + PMY+GL TNLPK+IM + + PFP S+L+HR V YL Y D L V V ++ + G EW G +Q ++ FD V + NGHY P G F G+ +++ EYD +GQ +LC+G RASG D+ARE+ E AA V +SD ++K G+ L + P D + F G +VD ++ CTGY+YNFPF+ + LPL N+ V PL++ L+HA +P + FIGLPHSVVPF LFELQA + LPD ER++ + R D HY+G QW Y R +A+ GGV D L+ L +KIY+ R + P PD YR+ Y
Sbjct: 39 KIAVIGAGAAGLAIARVMQRAGLDQVLVLEKDTSIGGVWNYKEAAKDRPMYQGLRTNLPKEIMGYREYPFPKEFDKSFLTHRQVCQYLKGYRDHFNLS--VQYGCAVNKLKVLEG-------------------EESCVNHSSGDKPWPKIELEWTDGPN--QQEKKDVFDAVYIANGHYSQPQVPPIPGI----EHFKGKTIHSIEYDLPSDFKGQKILCIGGRASGADLAREMTEAGAARVFLSDSAKKDGNVET--LGDTLTWVPRTNAIRKDGTLEFDLGCEIHPEVDVIIFCTGYDYNFPFIGETSN-LPLDSRNRRVQPLFEQLWHAVYPNIAFIGLPHSVVPFPLFELQAEACLSQMTRCT-LPDLTERMEHAVKAVGGEGMENGRVEDTHYLGSKQWDYCRRMAKYGGVYDESLEAFLTTNQKIYDHTGGLRKDEFPAGPDTYREYVY 463
BLAST of jgi.p|Trimin1|353660 vs. uniprot
Match: A0A448ZGX5_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZGX5_9STRA) HSP 1 Score: 231 bits (589), Expect = 1.100e-65 Identity = 159/473 (33.62%), Postives = 238/473 (50.32%), Query Frame = 1
Query: 19 KKVAVIGAGAAGLAAARRLRDAGHAVTVLERSGS---VGGVWRHGAPDLPTPMYRGLVTNLPKQIMSFLDAPF--PPAVASYLSHRDVLAYLTRYADAHGLRELVFTRALVTRVAPVWGGAQQGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWESG----GEGGRQRQRQRFDFVAVCNGHYDVPSDG--SGLGGGSLGTAFMGRVMYANEYDEAGGLEGQSVLCVGARASGTDIAREVAEVAAEVHVSDRSRKGGSTFRGGLHGNIARHPGVEKFTGDKGVLF--TDGTTADVDTVVLCTGYEYNFPFLEQVKE-ELPLRWDNKAVSPLYKHLFHAYHPTLCFIGLPHSVVPFHLFELQAALFAAVCNGSAQ-----LPDEAERLQCMQQEAQTRADMGL-RPRDAHYMGDMQWGYIRDIAQMGGVMDAQLDKELALREKIYNDASAARPPQ-PGDPDVYRKREYV 1374
+KVA+IG GAAGL AR L+ G T+ E+ + VGGVW + PMYRGL TNLP+++M++ + P+ S+++HR+V YL+RY+ G+ + + ++VT++ + WES G R Q + FD V VCNGHY P++ SG+ F G ++++ YD+ + Q+VLCVG RASG+D+ARE++ A V++SD + + + N++ P + + F T G T VDT++LC+GY+Y FPF+ +L + + V PLY+ L+HA +P+L FIGL HSVVPF FELQA A+ G + LP ER++C +++A + R +D HY+G QW A+ GV D L K + + IY+ + AR PG PD YR YV
Sbjct: 49 RKVAIIGGGAAGLVTARVLKRNGIESTIFEKDSNDTGVGGVWSYKQNSDTRPMYRGLRTNLPRELMAYREFPWGGDGKTRSFVTHREVKDYLSRYSKVMGVEDTIRYDSIVTQLEIL-----------------EIDEKKMENDEGNEQYSWPQIKVRWESVLDGINAGDRNSQSEVFDAVCVCNGHYSAPANPIISGM------ENFEGNIIHSITYDDPSVFKDQTVLCVGGRASGSDLAREISHFAKHVYLSDTTCPALVDGKPIIEENVSWVPRTTAVLPNSRISFGPTCGETPKVDTIILCSGYDYEFPFINDNSNLDLSVVPGERRVKPLYEQLWHAQYPSLAFIGLQHSVVPFPFFELQAEAIASQLVGDSSSRSWTLPPMKERMECAEKDATSGGPKAPGRVQDTHYLGSYQWEECLKYARFAGVCDEDLKKYIMTNKAIYDHSGEARKNLFPGGPDTYRYISYV 498
BLAST of jgi.p|Trimin1|353660 vs. uniprot
Match: F7AEB8_CIOIN (Flavin-containing monooxygenase n=2 Tax=Ciona intestinalis TaxID=7719 RepID=F7AEB8_CIOIN) HSP 1 Score: 227 bits (579), Expect = 2.110e-65 Identity = 156/451 (34.59%), Postives = 229/451 (50.78%), Query Frame = 1
Query: 10 TPVKKVAVIGAGAAGLAAARRLRDAGHAVTVL-ERSGSVGGVW---------RHGAPDLPTPMYRGLVTNLPKQIMSFLDAPFPPAVASYLSHRDVLAYLTRYADAHGLRELVFTRALVTRVAPVWGGAQQGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWE--SGGEGGRQRQRQRFDFVAVCNGHYDVPS--DGSGLGGGSLGTAFMGRVMYANEYDEAGGLEGQSVLCVGARASGTDIAREVAEVAAEVHVSDRSRKGGSTFRGGLHGNIARHPGVEKFTGDKGVLFTDGTTADVDTVVLCTGYEYNFPFLEQVKEELPLRWDNKAVSPLYKHLFHAYHPTLCFIGLPHSVVPFHLFELQAALFAAVCNGSAQLPDEAERLQCMQQEAQTRADMGLRPRDAHYMGDMQWGYIRDIAQMGG----VMDAQLDKELALREKIYN 1308
+P +++AVIGAGAAGL AAR + H V+ E + VGG W +G P + + MY+ L TNLPKQ+M+F D PF ++ S++ H DVL YL Y D + LR + LV +V P+ +WE + +Q R FD V VCNGH+ VP D G+ + F GR+++++EY E ++V+ +GA++SGTDIA ++A + +V +S + GS F+ L N+ P +FT GV F DGT + D + CTGY+Y FPFL + + DN ++PLYKHL + +PTL IG+ + PF F Q ++ +GSA+L E E L+ +Q+ Q R + GL PR AH MG QW Y D+A +GG + +L +L R + +N
Sbjct: 2 SPARRIAVIGAGAAGLCAARNILSKPHFTPVVYEGTNHVGGTWFFTEQTGKDEYGIP-IHSSMYKNLRTNLPKQVMAFPDFPFNKSLPSFIKHTDVLNYLESYCDEYKLRNHIEFSTLVEKVEPL---------------------------------EPDNRFTKWEVTTYHVSTKQTSRNIFDGVMVCNGHFSVPRVPDIEGM------SDFQGRLLHSHEYRSPQDFENRTVVILGAKSSGTDIALDLAPHSTKVVMSHK----GSQFKSELPSNVEERPVPLRFT-QTGVDFVDGTHIECDVFMFCTGYKYTFPFLGNL-----VSVDNNRITPLYKHLINIKYPTLSLIGVCCIICPFPQFHCQVNYAISLMDGSAKLLSEEEMLEDEKQDFQARIESGLPPRHAHLMGHRQWDYNNDLADLGGNERITDNVRLLYDLCHRRRTFN 402
BLAST of jgi.p|Trimin1|353660 vs. uniprot
Match: B8LCI8_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LCI8_THAPS) HSP 1 Score: 221 bits (563), Expect = 2.720e-62 Identity = 166/493 (33.67%), Postives = 238/493 (48.28%), Query Frame = 1
Query: 19 KKVAVIGAGAAGLAAARR-LRDAGHA----------VTVLERSGSVGGVWRHGAPDLPT---------PMYRGLVTNLPKQIMSFLDAPF--PPAVASYLSHRDVLAYLTRYADAHGLRELVFTRALVTRVAPVWGGAQQGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWESG--GEGGRQRQRQRFDFVAVCNGHYDVPSDGSGLGGGSLGTAFMGRVMYANEYDEAGGLEGQSVLCVGARASGTDIAREVAEVAAEVHVSDRSRKGGSTFRGGLHGNIARHPGVEKFTGDKGVLFT---------DGTTADVDTVVLCTGYEYNFPFLEQVKEELPLRW--DNKAVSPLYKHLFHAYHPTLCFIGLPHSVVPFHLFELQAALFAAV----CNGSA-QLPDEAERLQCMQQEAQTRA-DMGLRPRDAHYMGDMQWGYIRDIAQMGGVMDAQLDKELALREKIYNDASAARPPQ-PGDPDVYRKREY 1371
KKVA+IG GAAGLA AR LR G V+V E SVGG+W +G + PMYR L TNLPK++M F + P+ ASY++HR VL YL RYA L E + V ++ + G EW S + + +Q FD V +CNGHY +PS LG + F GR ++A EYD + +VLC+GARASG DIARE+ VA +V +SD + + N+ P + + G+ F+ + +VD ++ C+GY+Y FPF+ K L L + V PLY+ L+HA H ++ FIGLPHSVVPF LFE+Q V C G LP AERL +++A + D R +D H++G QW Y R ++++GG + +++ +A + +Y+ + + R PG DVYR+ +
Sbjct: 14 KKVAIIGGGAAGLATARAFLRANGEMKSSTPQLEFEVSVFESRRSVGGIWDYGDDGYASETKEASKTRPMYRNLRTNLPKELMQFKEFPWGGDGKEASYVTHRQVLEYLERYATKFNLLERIHFGCTVKQLTVLDAGDSD-------------------------TNEWPRISLEWTSQTIDKNSEEAHKQTFDNVCICNGHYALPSSPPLLGIDN----FRGRTIHAIEYDNPNDYKDLTVLCIGARASGADIAREIGLVAKQVFLSDSTCNEKREYD-----NVVVMPRTQSVDEEGGIHFSAKSDPAADEEWVATNVDVIIFCSGYDYQFPFIND-KSNLNLECIPGERRVQPLYEQLWHARHLSVAFIGLPHSVVPFPLFEIQGNAVRRVSQLQCIGQPLPLPPTAERLAVAERDASSGGPDNAGRVQDTHFLGSHQWDYCRQLSKIGGFYNDEMEDYIATNKALYDKSGSERKGVVPGAKDVYRETRF 471
BLAST of jgi.p|Trimin1|353660 vs. uniprot
Match: A0A7S4EGS7_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EGS7_9STRA) HSP 1 Score: 223 bits (567), Expect = 6.270e-62 Identity = 156/482 (32.37%), Postives = 243/482 (50.41%), Query Frame = 1
Query: 10 TPVKKVAVIGAGAAGLAAARRLRDAGHAVTVLE---RSGSVGGVWRHGAPDLPTPMYRGLVTNLPKQIMSFLDAPF--PPAVASYLSHRDVLAYLTRYADAHGLRELVFTRALVTRVAPVWGGAQQGGVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWES--GGEGGRQRQR----QRFDFVAVCNGHYDVPSDG--SGLGGGSLGTAFMGRVMYANEYDEAGGLEGQSVLCVGARASGTDIAREVAEVAAEVHVSDRSRKGGSTFRGGLHGNIARHPGVEKFTGDKGVLFTDGT---TADVDTVVLCTGYEYNFPFL-EQVKEELPLRWDNKAVSPLYKHLFHAYHPTLCFIGLPHSVVPFHLFELQAALFAAVCNGSA--------QLPDEAERLQCMQQEAQTRADMGL-RPRDAHYMGDMQWGYIRDIAQMGGVMDAQLDKELALREKIYNDASAARPPQ-PGDPDVYRKREYV 1374
TP++ VA+IG GAAGL AR ++ G TV E R VGGVW + PMYRGL TNLP+++M++ + P+ S+++H +V YL++Y+ A G+ +L+ R+ VT++ + ++ EWES GG ++ + FD V VCNGHY P++ G+ F G+++++ YD+ EG++VLCVG RASG D+ARE++ A V++SD + + + N++ P + + + T +VDT++ C+GY+Y FPF+ E+ +L + + V PLY+ L+HA +P+L FIGL HSVVPF FELQA A+ G + LP R++C +++A + R +D H++G QW A+ GV D L K + + IY+ + AR PG PD YR Y+
Sbjct: 98 TPLR-VAIIGGGAAGLVTARVMKRNGIEPTVFEKDSREAGVGGVWSYKPNSKSRPMYRGLRTNLPRELMAYREFPWGGDGKTMSFVTHNEVKDYLSKYSKAMGVEDLIRYRSTVTQLEILQNDEKK-------------IENDDGGGIEGDDSSWPRIKLEWESMMGGPNNSDDEKTSHSEVFDAVCVCNGHYAAPANPIIPGI------EDFKGKIIHSITYDDPSVFEGETVLCVGGRASGADLAREISHFAKHVYLSDTTCPALTDGKPVAEENVSWVPRTTAVLPNSSRISFGPSCEETPEVDTIIFCSGYDYQFPFINERSNLDLSVVTGERRVKPLYEQLWHAQYPSLAFIGLQHSVVPFPFFELQAEAVASQLAGDSGDSASRPWTLPPLENRMECAEKDANSGGPKEPGRVQDTHFLGSFQWEECLKYARFAGVCDEDLKKYIMTNKAIYDHSGEARKNLFPGGPDTYRYNSYI 559 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353660 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_16996 ID=mRNA_16996|Name=jgi.p|Trimin1|353660|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1577bp|location=Sequence derived from alignment at Contig_176:262978..278252+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. ATGTCTCGGACACCAGTCAAGAAGGTGGCTGTCATTGGCGCTGGCGCAGCback to top protein sequence of jgi.p|Trimin1|353660 >Trimin1|353660|estExt_Genemark1.C_Ctg_1760026 ID=Trimin1|353660|estExt_Genemark1.C_Ctg_1760026|Name=jgi.p|Trimin1|353660|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=483bp MSRTPVKKVAVIGAGAAGLAAARRLRDAGHAVTVLERSGSVGGVWRHGAPback to top mRNA from alignment at Contig_176:262978..278252+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_16996 ID=mRNA_16996|Name=jgi.p|Trimin1|353660|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=15275bp|location=Sequence derived from alignment at Contig_176:262978..278252+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_176:262978..278252+ >mRNA_16996 ID=mRNA_16996|Name=jgi.p|Trimin1|353660|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1449bp|location=Sequence derived from alignment at Contig_176:262978..278252+ (Tribonema minus UTEX_B_3156 )back to top |